
Cp4.1LG04g02040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGTCTTGATGCTGAGACCTCTTTAATGGATCTTCTTCTTCGTTTTCAAATTAACCCTCAGAGAATTTGATATTTCGTTTTTGTCCTGTTTTTGGGAGAGGGATTATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGGTTCATTCTTATATATATATATATATATATATATATATCTATATATTTGTTGGGTTTTTTTCTGTTTTTCTTTTATATCTTATCTTTGTTCTTATTTGGGTCTCCAAATATTTGAATTTTATGTAATGGGTATGTCAAAGTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTCAAAGATTTTGTGGATTTTTCTTCTTTTTTTCATTTGGGTCTCCTCAAATTTGAATTTTGTGTAATGGGTATGTCAAATTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTCAAAGATTTTGTGGATTTTACTTATTTTTTTCATTTGGGTCTCCAAAAATTTGCATTTTGTGTAATGGGTATGTCAAATTCCTAAGCTTTCTATATGTTTATGTTGTTTTTTTCAAAGATTTTTTGGATTTTTCTTCTTTTTTTTTTCATTTGGGTCTCCAAAAATTTGCATTTTGTGTAATGGGTATGTCAATGTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTTCAAAGATTTTTTGGATTTTTCTTCTTTTTTTTCATTTGGGTCTCCAAAATTTTAAATTTTATGTAATGGGTATGTCAAATTAATGACAGGGTTTTTTTTTCAGCTTTTCTCTTATATTTTCCATTTATTTATTAAATTAAATAAATAAAAAACCATTTATTCATTAATTTTTACTTTTATTTGTTTTTTTTTTTAAAAAAAAAATTCAGAGCCCAGATGGTGATATTATAGATTGTGTTCATAAAAGAAAACAGCCAGCTCTGGATCATCCCCTCTTGAAGAACCACAAAATTCAGGTCCAAAAAAAAATTAATAATTATCTCTATTTATTTTCTAAATATTCATATTAAATTTATTAAAAAATTTAAAATTAAATAATTAAATAATATTATTAATGTATTTGTGCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTACGCTATTATCTTTTCTTCAAAGCATTTAATAAATTGAAAAATGGGAGTTTTTATGAATAGATTCTTTTTCTTTACTTCAACTCCATGTTTTAATAATAAATAAATACACTTTTTACCTTTATATTAAATTAAATTAAAAAATAATTTTTAAAAATAAAAAAACTCGGAGTATTTTTTAAAAATTATTTTAAAAGTTTAAAAGTATTTTTGAAACAGTTCTACTGGAATGTCTTTGAACTTTTTTTTAAATTTTAATGATATTTTTTTTAACATTTTTTATTAAAAATTTAATAATATTTTTTAGACCATGTTTATAAATTTATTAAATATAAACTTAAGATTTTAATAACGTATTAAATATTAAATATTTATAATGTAGTACAATTTTAAATATATTTGACGTGAACGATTGCATATAAAATAGCATGCGATCGCATACACTAGATCGCCTGGGGAGATGTACGGAGCGAAGGCGACGATAAACGTGTGGGAACCGTCCATCCAAATGGTCAACGAGTTCAGCCTCTCTCAGATTTGGATCCTCTCTGGATCATTTGACGGCTCAGATCTCAACAGTATAGAGGCTGGTTGGCAGGTACTTTTTCCATTTCCTACATCCTCCCGCAGACAATCCTACCCCTCATCCTAAAAAAAATTAATTGCTATTTTTTTTACTATTTATCATATAATATTAATATTATTAAATTACACTATCATTAGTAAGAATTTATTATAATCAAAATAAAATATTCAAAAATTAAATAATATAATATGAAAGTATATATATATATATATATATATATATATATATATATATATATATATTATAATCAAATTATAATTCTTCTCGACCAAGAATTAATATTTACGCTTGTACTAAAAGAATTAATATTATTTTTTTTAGAGTTTTTTGAGTTTTCTAAAGTTTTGATTATTCTACTAGTCAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA TGGTCTTGATGCTGAGACCTCTTTAATGGATCTTCTTCTTCGTTTTCAAATTAACCCTCAGAGAATTTGATATTTCGTTTTTGTCCTGTTTTTGGGAGAGGGATTATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA ATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA MGRTRGVSVAMALFCVLLVVLQSFSLVCGLTYSYQHVSSLRFYRIQNHLDSINKPPLLTIQRAPTGWPKMKKNERRAGSGAGGPFQTWHVNATRCPKGTIPVRRSTVKDVLRAKSLFDFGKKKRPILLDRQMDAPDVVSGNGHEVSPELYGDSRPRLFTYWTVRSLFYIFKF Homology
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: XP_023530832.1 (uncharacterized protein LOC111793262 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287 bits (734), Expect = 3.55e-93 Identity = 162/248 (65.32%), Postives = 162/248 (65.32%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: XP_022926346.1 (uncharacterized protein LOC111433521 [Cucurbita moschata]) HSP 1 Score: 274 bits (700), Expect = 4.86e-88 Identity = 156/248 (62.90%), Postives = 159/248 (64.11%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: XP_022974267.1 (uncharacterized protein LOC111472904 [Cucurbita maxima]) HSP 1 Score: 264 bits (675), Expect = 3.33e-84 Identity = 153/253 (60.47%), Postives = 158/253 (62.45%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: KAG6588301.1 (hypothetical protein SDJN03_16866, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254 bits (650), Expect = 1.28e-80 Identity = 147/238 (61.76%), Postives = 148/238 (62.18%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: XP_038878456.1 (uncharacterized protein LOC120070684 isoform X2 [Benincasa hispida]) HSP 1 Score: 201 bits (511), Expect = 2.29e-59 Identity = 129/273 (47.25%), Postives = 144/273 (52.75%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. ExPASy TrEMBL
Match: A0A6J1EEL6 (uncharacterized protein LOC111433521 OS=Cucurbita moschata OX=3662 GN=LOC111433521 PE=4 SV=1) HSP 1 Score: 274 bits (700), Expect = 2.35e-88 Identity = 156/248 (62.90%), Postives = 159/248 (64.11%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. ExPASy TrEMBL
Match: A0A6J1I9T9 (uncharacterized protein LOC111472904 OS=Cucurbita maxima OX=3661 GN=LOC111472904 PE=4 SV=1) HSP 1 Score: 264 bits (675), Expect = 1.61e-84 Identity = 153/253 (60.47%), Postives = 158/253 (62.45%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. ExPASy TrEMBL
Match: A0A6J1JIQ1 (uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 2.95e-58 Identity = 121/242 (50.00%), Postives = 132/242 (54.55%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. ExPASy TrEMBL
Match: A0A1S3B8R5 (uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 7.61e-58 Identity = 127/265 (47.92%), Postives = 141/265 (53.21%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. ExPASy TrEMBL
Match: A0A6J1HAZ7 (uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC111461698 PE=4 SV=1) HSP 1 Score: 195 bits (496), Expect = 1.17e-57 Identity = 119/238 (50.00%), Postives = 129/238 (54.20%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. TAIR 10
Match: AT5G18460.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32 Identity = 84/221 (38.01%), Postives = 102/221 (46.15%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. TAIR 10
Match: AT1G10750.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12 Identity = 67/227 (29.52%), Postives = 88/227 (38.77%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-11 Identity = 64/239 (26.78%), Postives = 89/239 (37.24%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-11 Identity = 64/239 (26.78%), Postives = 89/239 (37.24%), Query Frame = 0
BLAST of Cp4.1LG04g02040 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 65.1 bits (157), Expect = 6.4e-11 Identity = 61/231 (26.41%), Postives = 90/231 (38.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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