Cp4.1LG04g01850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g01850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionprotein translocase subunit SecA
LocationCp4.1LG04: 251601 .. 255305 (+)
RNA-Seq ExpressionCp4.1LG04g01850
SyntenyCp4.1LG04g01850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAAATAAAAATAAATAAATACTGATGTTTTTTTTTTTTTAAAAAAGAGAAGTGAGTTTAGGAGGTAAGGTGTTTCTCGGCTTCCATCCCGCCTGAATATTCGTTAACCCTCCGAATTGACTAAAACCCTAATTCCAACCTGAAGAAGCCGATTACGAACTCATGCATTTTCCCAAAATGCGTTCCTCCTCTCGATTCCTAATCAATCTTTCCGAGACAAACACATCTAATCTCAATTTGTTCTTCCCCTTCTCTTCTTCCGATCGCAGTCCCCGAAATTGTGTTTCGACTCTGTTACAGTCCCGGTCTATCTTCTCCACGACGCAGCTTCACGATTCATGGATGGACAAGATCAAGGGAGCCTTCACTGGAAAGAAGAGCTCTTCCGAAGGAACCGAAATCAGCTCTGAGTCCTTTACTCTCCTCCGTACGCCTCATTTCCCATCACTTAAAGTTGTATTTCTTCAATTGCACGATAATATATCTAAGTTTATGACCAAATTTAATTATTTGTCTGTTTATTTATCTCAGGGTTTGCTGATGAATTGAAAAATGCCCGAAGAGTGGGGGCATTCAAGCAATATATAGTAGGAAGAAGTAGTGAAGCTACCTTTGCGGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGATTTGATCCCACTGGGGAGGTTGGTTTTCTAGCAATTTGCTTTCTAATAATTACTTATTTGTTTGAGTTGCAATGGAAAAGTTATAATGTCTGATCTTGATGTAATGGTTCTTACACTGCCCATAAATGGAGTATTTGTTAATCTTCACTATGAGCCACTGGTAAAGTAGAAAACAAGAGGGAAAAATAGGACAATGAGATTAGTTTAGTTTTGGCCAAATTTAGAAATGTATATTTTACTGCTGAATAATTTGAGCTGCCACCATTTTTCCAGCAGATTGAAAACATGGGTCTCCTTCTCCAGATTTTCTAGCACTCATTGTTTTTGTAGGACAAAATTTCGTTAATTCAGTGAATATAGGAAAGGCAATGAAACCTTTCACTGAACCCAATGTGGTTACCGAAAAAACCTCAAACTAGCACTAATATCTGTTGAATTAAGTGAATAAAGCTGTAACTCATTCTCGCCCAATCAAAAGACAAACCCTCGTAGGAGTTCCTAACTTACTCATAATTTAGATTGAGTCACATATGATCATCTTATGAAACATTAATTCTCAATTAACGAATTTATAAAGAAAAGACTAAATATTTTGTTGTCTTAGTCTTAAACGAACTTATTTATAGGATACCCCACTCACATGTCTCCAAGTGAATGATTTGGACATTTATATAACCATTGCAAAATAGGGTTGCAAAATAGGGAGCTTAAGTGAATAAAGCCCCCTGTTTTGTTTAATCCAATTGACCAAATGGGAGCAAAGGAAGTTGTTGGGGTCTTTCTGCAACCATTACTATGTTTAATGGTTTGAAATGTGTTTTTTGAAGGGGCTTAAGCCTGAAGTGAAAAAGATTACAAAAAGGACTTGAGGTATTGATGCATGCTGTGTGCCTCGATGTGCTTCAGTGAGGGTACAATGCTTCAACGCTTCACTTTAAAAACACTGGGTTTGAAATTGATTTAGTTGTTTCACGTTTTGGCACTACAACATTTGATGATTAAGAAATAGGTTACATAACTTTACTTCCTAACCAGCTTTGGGATTCATGATCACTTGGTTGAACCGGAAGGGCTTTCCATTATGATCAGTCTTTCAGCACTTTCACTGCTATTTGATTTCTTCAATTGAATTCTTAATCTTATTTTCTGTCAACTGACAGGCAGGCATGATTTAGAGTTGTTTCCATGGGCCTATAACATTCTTCTTTTATTTGGTGAATTGGGTCCATTTTCTGTCTATGATAATTCGTTAGCTCGGTTTTTATCATCTGAGTTAGTGAAAATAATAACGAATAGAGTTACGCTAACCTTTATTTGTTTCCAACAGTTTCCATATTATTTTGCGCTTCTGGATAAGTTTTCTGATTGTGATCTTAGGCTTCCTGATCTTTAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAAGTGTAATTGCACGATCGCTGATGTTGAGAATACACTGGCAAAGTTTATCTGGGCTAAAGAAGCACAAAAAAAGATTGAGAAGTTGAAGGAAGAAGGAAAACCTATGCCTAAGAGCATAGCTGAGGTAGATCTTTATACATATAGTTCCATGTTCTTAAAAACTAAAGTTTACTGTCAACGTTGCTTTATCTAGCCAAAGAAAGTAGTTATTGTATGGATACATTGCAAAACTCTTATCCTTTTCTGTTAATACGACTTGGTTCCTTCTGCTTTTGTACCACTCTGAAAACTGATAAGGGCTTGGAGTGTCCTGTTTTCTGGTCCTGCTTTCCGGCATACTTTTATATTTTTTATTTTTTTAAAATTGTGACAATGCTCAACTGATCATGTTTGTTCACAAATTATGTTTACTAGGTCCAGAAACTGGTGGGTTCAAATCCTTTGGATCTTGCTAGGTCTAATTTGGCTAAGAGTGGCCAGATCAGCCGTAATGCTCTCTGTCCTTGCGGTTCCAAGAAGCGATATAAACGGTATTTAACTTAGAACCGTTGCTTAATTATTGAATTCCAGTAGAACTTAAAATGTCTTTTCATTGAGCTTACCATCAATCCTCAATTCATAGCTTAAAACAAAGCAAAACCAGAAAGAAGATGATCATCCTTTGAGTAATAGACATTTTAAGTTTAGCTGAGCAAGTTAGGGTAGAACTTTGGTTCTTGGATGATGTAACTGTCCAGAAACTGATCACTGGAATGTTGATCATTTTTGTATTGCCCACCTTATTTATTGTTCCAAATCACTTTTATAAGCCCGTTGATCTTCTGCCTGGCCACAAAGAACCCATCACCACGACAATGCTTGCTTGAAATGTAGCCCCATAGTCATTCAGTTTTATCCTTCCAACTCGCCATGAACATCTGGCTCCTCTTTCCTTGTGCAAGTATGATTTTAAAAATGTGTATATACTTCTGTATAGCATGGATTTCTTATTACTGCAATTGTTTTTGTTTTTATGAAGGTGCTGCGGGAAGGATCAAACGGCATAGGAAGAGAACATGTTTGTCTGTTCCCTGTTTCTTGACTGAATAAGTGGCAGTTCATAAGGATTATGTTAGATTGATCTTTCTATTTTATGTTACCTAGTTGGTTAAGCCATTTATGGAGGGAATGAGACGTTGGCATGGTTTTTAAATGCGTCAAATCCTCATGATCCTTCACGGGATCTTCAATATGTAGTCTCGTGACAATAGTTGAGGTGCGTCGATCTTCTAAATATAGTAAGGACAGGCTATTGTCTGGTGACAATAGTCGAGGTGCGCCAATCTTGCAAATATAGTAAGGCCATGCTATTGTCTCGTGACAATAGTCGGTGCGCTGAAGCTGGCCCTAATAATGTGGTATGTATTCCTTGATCCTCAGTAGATCTTCAAATTTCACCTGAATGAGTTGGATTTTGCTAGGGGCTATTATTCATTAATTATATATGATGTTTGAGTTTGAGTACCTAAAAATACATTTCCTGCTAAAAGATATTCTTCTCTTTGGCTTGTTTCCTTTATCATCGCCAGCTTTTCGGTTTTAGTATAATGATCGGTTATGTAGAAATTTT

mRNA sequence

ATAAAAAATAAAAATAAATAAATACTGATGTTTTTTTTTTTTTAAAAAAGAGAAGTGAGTTTAGGAGGTAAGGTGTTTCTCGGCTTCCATCCCGCCTGAATATTCGTTAACCCTCCGAATTGACTAAAACCCTAATTCCAACCTGAAGAAGCCGATTACGAACTCATGCATTTTCCCAAAATGCGTTCCTCCTCTCGATTCCTAATCAATCTTTCCGAGACAAACACATCTAATCTCAATTTGTTCTTCCCCTTCTCTTCTTCCGATCGCAGTCCCCGAAATTGTGTTTCGACTCTGTTACAGTCCCGGTCTATCTTCTCCACGACGCAGCTTCACGATTCATGGATGGACAAGATCAAGGGAGCCTTCACTGGAAAGAAGAGCTCTTCCGAAGGAACCGAAATCAGCTCTGAGTCCTTTACTCTCCTCCGGTTTGCTGATGAATTGAAAAATGCCCGAAGAGTGGGGGCATTCAAGCAATATATAGTAGGAAGAAGTAGTGAAGCTACCTTTGCGGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGATTTGATCCCACTGGGGAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAAGTGTAATTGCACGATCGCTGATGTTGAGAATACACTGGCAAAGTTTATCTGGGCTAAAGAAGCACAAAAAAAGATTGAGAAGTTGAAGGAAGAAGGAAAACCTATGCCTAAGAGCATAGCTGAGGTCCAGAAACTGGTGGGTTCAAATCCTTTGGATCTTGCTAGGTCTAATTTGGCTAAGAGTGGCCAGATCAGCCGTAATGCTCTCTGTCCTTGCGGTTCCAAGAAGCGATATAAACGGTGCTGCGGGAAGGATCAAACGGCATAGGAAGAGAACATGTTTGTCTGTTCCCTGTTTCTTGACTGAATAAGTGGCAGTTCATAAGGATTATGTTAGATTGATCTTTCTATTTTATGTTACCTAGTTGGTTAAGCCATTTATGGAGGGAATGAGACGTTGGCATGGTTTTTAAATGCGTCAAATCCTCATGATCCTTCACGGGATCTTCAATATGTAGTCTCGTGACAATAGTTGAGGTGCGTCGATCTTCTAAATATAGTAAGGACAGGCTATTGTCTGGTGACAATAGTCGAGGTGCGCCAATCTTGCAAATATAGTAAGGCCATGCTATTGTCTCGTGACAATAGTCGGTGCGCTGAAGCTGGCCCTAATAATGTGGTATGTATTCCTTGATCCTCAGTAGATCTTCAAATTTCACCTGAATGAGTTGGATTTTGCTAGGGGCTATTATTCATTAATTATATATGATGTTTGAGTTTGAGTACCTAAAAATACATTTCCTGCTAAAAGATATTCTTCTCTTTGGCTTGTTTCCTTTATCATCGCCAGCTTTTCGGTTTTAGTATAATGATCGGTTATGTAGAAATTTT

Coding sequence (CDS)

ATGCATTTTCCCAAAATGCGTTCCTCCTCTCGATTCCTAATCAATCTTTCCGAGACAAACACATCTAATCTCAATTTGTTCTTCCCCTTCTCTTCTTCCGATCGCAGTCCCCGAAATTGTGTTTCGACTCTGTTACAGTCCCGGTCTATCTTCTCCACGACGCAGCTTCACGATTCATGGATGGACAAGATCAAGGGAGCCTTCACTGGAAAGAAGAGCTCTTCCGAAGGAACCGAAATCAGCTCTGAGTCCTTTACTCTCCTCCGGTTTGCTGATGAATTGAAAAATGCCCGAAGAGTGGGGGCATTCAAGCAATATATAGTAGGAAGAAGTAGTGAAGCTACCTTTGCGGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGATTTGATCCCACTGGGGAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAAGTGTAATTGCACGATCGCTGATGTTGAGAATACACTGGCAAAGTTTATCTGGGCTAAAGAAGCACAAAAAAAGATTGAGAAGTTGAAGGAAGAAGGAAAACCTATGCCTAAGAGCATAGCTGAGGTCCAGAAACTGGTGGGTTCAAATCCTTTGGATCTTGCTAGGTCTAATTTGGCTAAGAGTGGCCAGATCAGCCGTAATGCTCTCTGTCCTTGCGGTTCCAAGAAGCGATATAAACGGTGCTGCGGGAAGGATCAAACGGCATAG

Protein sequence

MHFPKMRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIKGAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKPMPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Homology
[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy Swiss-Prot
Match: A6TLE7 (Protein translocase subunit SecA 1 OS=Alkaliphilus metalliredigens (strain QYMF) OX=293826 GN=secA1 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 39/162 (24.07%), Postives = 72/162 (44.44%), Query Frame = 0 

Query: 79  EISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAI-----IRYLGGF 138
           +I   S  L    +E   A R+   ++ IV +  +  + D  +  + +     +R +G  
Sbjct: 745 QIYETSEKLYEAKEEEIEAERMRELERIIVLQVIDTKWMDHIDAMDQLRQGIGLRAIGQI 804

Query: 139 DPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKPMPKSIAEV 198
           DP       + + E     N  I  ++    K+++  E Q K+E+ K+  KP+  S  + 
Sbjct: 805 DPV-----RAYQVEGFDMFNAMINSIQEDTVKYLFNVEPQAKVER-KQVAKPIEASHGDG 864

Query: 199 QKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGK 236
            +          ++ + K  +  RN  CPCGS K+YK+CCG+
Sbjct: 865 NR---------KKAPVVKEKEAGRNDPCPCGSGKKYKKCCGE 891

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy Swiss-Prot
Match: A4XJ42 (Protein translocase subunit SecA OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=secA PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 21/50 (42.00%), Postives = 33/50 (66.00%), Query Frame = 0 

Query: 186 MPKSIAEVQKLVGSNPLDL-ARSNLAKSGQISRNALCPCGSKKRYKRCCG 235
           MPK    V+++  ++P D   R ++ K+ ++ RN  CPCGS K+YK+CCG
Sbjct: 797 MPKRERVVKEMYENSPSDAPVRKSVVKTQKVGRNDPCPCGSGKKYKKCCG 846

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy Swiss-Prot
Match: A4J927 (Protein translocase subunit SecA OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=secA PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 40/163 (24.54%), Postives = 74/163 (45.40%), Query Frame = 0 

Query: 79  EISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAI-----IRYLGGF 138
           E+   + +L +  +E   A  +   ++ ++ R  +  + D  +  + +     +R  G  
Sbjct: 727 ELLERTMSLYQKREEELGAETLREIERIVLLRLVDEKWMDHLDAMDQLREGIGLRAYGSK 786

Query: 139 DPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKPMPKSIAEV 198
           DP  E      K EA +  N  IA++++ + ++I+        E+ + +   +    AE 
Sbjct: 787 DPVIE-----YKFEAYEMFNNMIANIQDDVVRYIFRVNVAAPQERTQRQ--VVENRYAEE 846

Query: 199 QKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD 237
           +   G  P       + K  QI RN  CPCGS K+YK+CCGK+
Sbjct: 847 E---GKQP-------IRKENQIGRNDDCPCGSGKKYKKCCGKN 872

[Close]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match: XP_023530731.1 (uncharacterized protein LOC111793188 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466 bits (1198), Expect = 3.10e-165
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0 

Query: 1   MHFPKMRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSW 60
           MHFPKMRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSW
Sbjct: 1   MHFPKMRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSW 60

Query: 61  MDKIKGAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAF 120
           MDKIKGAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAF
Sbjct: 61  MDKIKGAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAF 120

Query: 121 EKQEAIIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLK 180
           EKQEAIIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLK
Sbjct: 121 EKQEAIIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLK 180

Query: 181 EEGKPMPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           EEGKPMPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 EEGKPMPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239

[Close]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match: XP_022932559.1 (uncharacterized protein LOC111439055 [Cucurbita moschata])

HSP 1 Score: 446 bits (1146), Expect = 2.19e-157
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQL+DSWMDKIK
Sbjct: 1   MRSSSRVLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLYDSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           GAFTGKKS SEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           MPKS+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 234

[Close]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match: KAG6588322.1 (hypothetical protein SDJN03_16887, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020884.1 hypothetical protein SDJN02_17572 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 445 bits (1144), Expect = 4.42e-157
Identity = 229/234 (97.86%), Postives = 233/234 (99.57%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPR+CVSTLLQSRSIFSTTQL+DSWMDKIK
Sbjct: 1   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRHCVSTLLQSRSIFSTTQLYDSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           GAFTGKKS SEGTEISSESFTLLRFA+ELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFAEELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           MPKS+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 234

[Close]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match: XP_022965948.1 (uncharacterized protein LOC111465670 [Cucurbita maxima])

HSP 1 Score: 434 bits (1115), Expect = 1.08e-152
Identity = 226/234 (96.58%), Postives = 229/234 (97.86%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSRFLINLSETNTSNLN  FPFSS DRSPRNCVS LLQSRSIFSTTQL+DSWMDKIK
Sbjct: 1   MRSSSRFLINLSETNTSNLN--FPFSSFDRSPRNCVSALLQSRSIFSTTQLYDSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           GAFTGKKS SEGTEISSESFTLLRFA+ELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFAEELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           MPKS+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 232

[Close]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match: XP_038878551.1 (protein translocase subunit SecA 1 [Benincasa hispida])

HSP 1 Score: 402 bits (1033), Expect = 3.65e-140
Identity = 208/233 (89.27%), Postives = 217/233 (93.13%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LIN S+ +T N NLFFPFSSSD SPRNC  TLLQSRSIFSTTQL+ SWMDKIK
Sbjct: 1   MRSSSRALINFSKKSTWNPNLFFPFSSSDHSPRNCDLTLLQSRSIFSTTQLNGSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           G  TGKKS S+GT+ISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKSPSDGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVEN LAKF+WAK+AQ KIEKLK EGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENVLAKFMWAKQAQTKIEKLKAEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 238
           +P SIAEVQKLVGSNPLDLARSNLAKSGQ+SRNALCPCGSKKRYKRCCGKDQT
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQMSRNALCPCGSKKRYKRCCGKDQT 233

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match: A0A6J1EXB8 (uncharacterized protein LOC111439055 OS=Cucurbita moschata OX=3662 GN=LOC111439055 PE=4 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 1.06e-157
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQL+DSWMDKIK
Sbjct: 1   MRSSSRVLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLYDSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           GAFTGKKS SEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           MPKS+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 234

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match: A0A6J1HQG1 (uncharacterized protein LOC111465670 OS=Cucurbita maxima OX=3661 GN=LOC111465670 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 5.24e-153
Identity = 226/234 (96.58%), Postives = 229/234 (97.86%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSRFLINLSETNTSNLN  FPFSS DRSPRNCVS LLQSRSIFSTTQL+DSWMDKIK
Sbjct: 1   MRSSSRFLINLSETNTSNLN--FPFSSFDRSPRNCVSALLQSRSIFSTTQLYDSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           GAFTGKKS SEGTEISSESFTLLRFA+ELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFAEELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 239
           MPKS+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTA 232

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match: A0A1S3BPC0 (protein translocase subunit SecA OS=Cucumis melo OX=3656 GN=LOC103492237 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 2.06e-139
Identity = 206/233 (88.41%), Postives = 215/233 (92.27%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LI LS+  T N NLFFP SSSD +P NC  TLLQSRSIFSTTQLH SWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           G  TGKK+++EGT+ISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFD TGENIQTSQKQEAAK CNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 238
           +P SIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 233

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match: A0A0A0LWL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573720 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.19e-138
Identity = 204/233 (87.55%), Postives = 215/233 (92.27%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LIN S+  T N NLFFPFSSSD +P NC  TLLQSRSIFSTTQLH SWMDKIK
Sbjct: 1   MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           G  +GKK+S+EGT+ISSESFTLLRFADELKNARRVGA KQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVISGKKNSTEGTDISSESFTLLRFADELKNARRVGALKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFD TGENIQTSQKQEAAK CNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 238
           +P +IAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT
Sbjct: 181 LPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 233

[Close]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match: A0A5D3CG47 (Protein translocase subunit SecA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003190 PE=4 SV=1)

HSP 1 Score: 383 bits (983), Expect = 1.04e-132
Identity = 199/226 (88.05%), Postives = 208/226 (92.04%), Query Frame = 0 

Query: 6   MRSSSRFLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLHDSWMDKIK 65
           MRSSSR LI LS+  T N NLFFP SSSD +P NC  TLLQSRSIFSTTQLH SWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 66  GAFTGKKSSSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 125
           G  TGKK+++EGT+ISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 126 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 185
           IIRYLGGFD TGENIQTSQKQEAAK CNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 186 MPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 231
           +P SIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]
BLAST of Cp4.1LG04g01850 vs. TAIR 10
Match: AT3G04950.1 (CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). )

HSP 1 Score: 281.2 bits (718), Expect = 7.9e-76
Identity = 141/192 (73.44%), Postives = 162/192 (84.38%), Query Frame = 0 

Query: 46  QSRSIFSTTQLHDSWMDKIKGAFTGKKSSS-EGTEISSESFTLLRFADELKNARRVGAFK 105
           Q RSI ST  L + WMD IKG FTG K +  E + +  E+FTLLRFADELKNARR+G FK
Sbjct: 41  QQRSITSTAPL-NGWMDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRLGKFK 100

Query: 106 QYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLA 165
           QYIVGRSSEATFADAFEKQEA+IRYLG  D TGEN+Q SQKQ+AAK C CTI DVENTL+
Sbjct: 101 QYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLS 160

Query: 166 KFIWAKEAQKKIEKLKEEGKPMPKSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCG 225
           KF WA++A KK+ +LKE GKP+PK++ E+QK++GS P+DLARSNLAKSGQISRNALCPCG
Sbjct: 161 KFTWARQAHKKMTELKEGGKPLPKNMGELQKMMGSTPMDLARSNLAKSGQISRNALCPCG 220

Query: 226 SKKRYKRCCGKD 237
           SKKRYKRCCGKD
Sbjct: 221 SKKRYKRCCGKD 231

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g01850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A6TLE71.6e-0424.07Protein translocase subunit SecA 1 OS=Alkaliphilus metalliredigens (strain QYMF)... [more]
A4XJ427.8e-0442.00Protein translocase subunit SecA OS=Caldicellulosiruptor saccharolyticus (strain... [more]
A4J9277.8e-0424.54Protein translocase subunit SecA OS=Desulfotomaculum reducens (strain MI-1) OX=3... [more]
BLAST of Cp4.1LG04g01850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023530731.13.10e-165100.00uncharacterized protein LOC111793188 [Cucurbita pepo subsp. pepo][more]
XP_022932559.12.19e-15798.29uncharacterized protein LOC111439055 [Cucurbita moschata][more]
KAG6588322.14.42e-15797.86hypothetical protein SDJN03_16887, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022965948.11.08e-15296.58uncharacterized protein LOC111465670 [Cucurbita maxima][more]
XP_038878551.13.65e-14089.27protein translocase subunit SecA 1 [Benincasa hispida][more]
BLAST of Cp4.1LG04g01850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EXB81.06e-15798.29uncharacterized protein LOC111439055 OS=Cucurbita moschata OX=3662 GN=LOC1114390... [more]
A0A6J1HQG15.24e-15396.58uncharacterized protein LOC111465670 OS=Cucurbita maxima OX=3661 GN=LOC111465670... [more]
A0A1S3BPC02.06e-13988.41protein translocase subunit SecA OS=Cucumis melo OX=3656 GN=LOC103492237 PE=4 SV... [more]
A0A0A0LWL61.19e-13887.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573720 PE=4 SV=1[more]
A0A5D3CG471.04e-13288.05Protein translocase subunit SecA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of Cp4.1LG04g01850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04950.17.9e-7673.44CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004027SEC-C motifPFAMPF02810SEC-Ccoord: 217..235
e-value: 1.1E-6
score: 28.4
NoneNo IPR availableGENE3D3.10.450.50coord: 104..236
e-value: 1.4E-6
score: 30.8
NoneNo IPR availablePANTHERPTHR36750SEC-C MOTIF PROTEINcoord: 38..236
NoneNo IPR availableSUPERFAMILY103642Sec-C motifcoord: 215..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g01850.1Cp4.1LG04g01850.1mRNA