Cp4.1LG04g01530 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g01530
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG04: 536384 .. 536794 (-)
RNA-Seq Expression	Cp4.1LG04g01530
Synteny	Cp4.1LG04g01530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCTTCTCACATTTCGATGGTCACAACCTCGAGAAACAAAAATAAGGTCCCAAAACCCAAAAAGACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGTATGTTCATATTGGATGCCCACTGCTCCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAAGGTGGTCATTTCATGACAATTGGTTAGGCACTACGGATTTTCATTGTAGATTGGAGTGGCAATATGGGCTTTTAGACTTTGATGCCTTTCATAGCAACACTGATAATCTTTTGATCGATTATTGCGCCAACGCAACCTGA

mRNA sequence

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCTTCTCACATTTCGATGGTCACAACCTCGAGAAACAAAAATAAGGTCCCAAAACCCAAAAAGACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGTATGTTCATATTGGATGCCCACTGCTCCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAAGGTGGTCATTTCATGACAATTGGTTAGGCACTACGGATTTTCATTGTAGATTGGAGTGGCAATATGGGCTTTTAGACTTTGATGCCTTTCATAGCAACACTGATAATCTTTTGATCGATTATTGCGCCAACGCAACCTGA

Coding sequence (CDS)

ATGGCGATGCATCGGCCTATGTTATTGCTAGTGCTTGTGCTCATAGCCTCTTCTCACATTTCGATGGTCACAACCTCGAGAAACAAAAATAAGGTCCCAAAACCCAAAAAGACAAAGCCCAAATTTCTAAAACCAAACAATCCTAATCCCGCCTTTGAGCGTTTTACTGTAGAGATCCATAACGACTTGCGTATGTTCATATTGGATGCCCACTGCTCCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCAGATGAGGAACAAAGGTGGTCATTTCATGACAATTGGTTAGGCACTACGGATTTTCATTGTAGATTGGAGTGGCAATATGGGCTTTTAGACTTTGATGCCTTTCATAGCAACACTGATAATCTTTTGATCGATTATTGCGCCAACGCAACCTGA

Protein sequence

MAMHRPMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNLLIDYCANAT

Homology

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-07
Identity = 39/121 (32.23%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 9   LLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAF--ERFTVEIHNDL-RM 68
           L +L++  ++ +S    + +KN +P P         P++ N  F   + TVEI+NDL   
Sbjct: 10  LFILIIFITTKLSQ---ADHKNDIPVPN-------DPSSTNSVFPTSKRTVEINNDLGNQ 69

Query: 69  FILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTD 127
             L  HC SKDDDLG   L P E   +SF   + G T + C   W      FD +  + D
Sbjct: 70  LTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRD 120

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06
Identity = 28/78 (35.90%), Postives = 39/78 (50.00%), Query Frame = 0


Query: 49  NPAFERFTVEIHNDLR-MFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCR 108
           NP F +  V + N++     L   C SKDDDLG H+L   +   W F  +W  TT F C+
Sbjct: 26  NP-FAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCK 85

Query: 109 LEWQYGLLDFDAFHSNTD 126
             W   +  FD + S+ D
Sbjct: 86  FLWNNNVKWFDTYRSDRD 102

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 31/84 (36.90%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 54  RFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRL-EWQY 113
           R T++  ND   ++L  HC S+DDDLG HIL   E   W FH N+  +T + C   + Q 
Sbjct: 47  RVTIQNDND---YLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQM 106

Query: 114 GLLDFDAFHSNTDNLLIDYCANAT 137
               F+ + +N D      CAN T
Sbjct: 107 KKGVFEIYRANRD---FYRCANCT 124

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 22/65 (33.85%), Postives = 32/65 (49.23%), Query Frame = 0


Query: 68  LDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNL 127
           L  HC SK DDLG+H++   +E  + F  N   +T F C  +W      FD + +  D  
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQG 101

Query: 128 LIDYC 133
           + D C
Sbjct: 102 ICDDC 106

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05
Identity = 23/60 (38.33%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 68  LDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNL 127
           L+ HC S DDDLGL IL P+    + F  + +GTT F+C   W      FD +  + D +
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

[Close]

BLAST of Cp4.1LG04g01530 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 265 bits (676), Expect = 1.30e-88
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MAMHRPMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60
           MAM RPMLLLVLVLIA SH SM+TTS+N NKVPKPKKTKPKFLKPNNPNPAFERFTVEIH
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60

Query: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAF 120
           NDLRMFILDAHCSSKDDDLGLHILFPDEEQ WSFHDNWLGTT+FHCRLEWQYGLL+FDAF
Sbjct: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120

Query: 121 HSNTDNLLIDYCANAT 136
           HSNTDNLLIDYCANAT
Sbjct: 121 HSNTDNLLIDYCANAT 136

[Close]

BLAST of Cp4.1LG04g01530 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 150 bits (378), Expect = 2.32e-43
Identity = 80/132 (60.61%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 5   RPMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLR 64
           R  LLLV++L+A    SM    + KNK P PK        PNNP   FERFTVEIHNDLR
Sbjct: 4   RLTLLLVILLLAPLRTSMAK-KKAKNKSPTPK-----LSVPNNPVVMFERFTVEIHNDLR 63

Query: 65  MFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNT 124
           MFILD+HC SKDDDLGLHILFPDE+Q WSF  NW+ TT FHCRLEW+ G L+FD+F S  
Sbjct: 64  MFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAP 123

Query: 125 DNLLIDYCANAT 136
           D  + +YC N T
Sbjct: 124 D-FVTNYCGNQT 128

[Close]

BLAST of Cp4.1LG04g01530 vs. NCBI nr
Match: KAE8648173.1 (hypothetical protein Csa_018428 [Cucumis sativus])

HSP 1 Score: 126 bits (317), Expect = 1.31e-34
Identity = 68/119 (57.14%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 1   MAMHRPM-LLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEI 60
           MA  R M LLLVL+L+ S ++SM      K K  K K  KP    PNNP  +FE+F VEI
Sbjct: 1   MAFQRLMPLLLVLLLLTSFNVSMA-----KKKKAKSKTEKPDLPDPNNPIVSFEKFRVEI 60

Query: 61  HNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFD 118
           HNDL M++LD+ C SKDD+ GLH+LFPDE+Q WSF  NW  TT FHCRLEW+ G LD D
Sbjct: 61  HNDLNMYLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGCLDAD 114

[Close]

BLAST of Cp4.1LG04g01530 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125 bits (314), Expect = 1.40e-33
Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 6   PMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRM 65
           P+LLL+L+L+    ++M   S+ K +      T P+   PN P  A  +F V I N LRM
Sbjct: 11  PLLLLLLLLLHLVSLTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLRM 70

Query: 66  FILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTD 125
           ++LD+HC SKDDDLG+H+++PD+EQ WSF  NWLG+T+FHC+LEW YG ++FDAF  +  
Sbjct: 71  YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDL- 130

Query: 126 NLLIDYCANAT 136
           N +  +C +++
Sbjct: 131 NFVTTFCGDSS 134

[Close]

BLAST of Cp4.1LG04g01530 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123 bits (309), Expect = 7.55e-33
Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 6   PMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLRM 65
           P+LLL+L  + S  ++M   S+ K +      T P+   PN P  A  +F V I N LRM
Sbjct: 11  PLLLLLLFHLVS--LTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLRM 70

Query: 66  FILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTD 125
           ++LD+HC SKDDDLG+ +++PD+EQRWSF  NWLG+T+FHC+LEW YG ++FDAF  +  
Sbjct: 71  YLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFDDDL- 130

Query: 126 NLLIDYCANAT 136
           N +  +C N++
Sbjct: 131 NFVTSFCGNSS 132

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 265 bits (676), Expect = 6.29e-89
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MAMHRPMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60
           MAM RPMLLLVLVLIA SH SM+TTS+N NKVPKPKKTKPKFLKPNNPNPAFERFTVEIH
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVEIH 60

Query: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAF 120
           NDLRMFILDAHCSSKDDDLGLHILFPDEEQ WSFHDNWLGTT+FHCRLEWQYGLL+FDAF
Sbjct: 61  NDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAF 120

Query: 121 HSNTDNLLIDYCANAT 136
           HSNTDNLLIDYCANAT
Sbjct: 121 HSNTDNLLIDYCANAT 136

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 8.15e-42
Identity = 69/103 (66.99%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 34  KPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWS 93
           K K   PK   PNNP   FERFTVEIHNDLRMFILD+HC SKDDDLGLHILFPDE+Q WS
Sbjct: 7   KNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWS 66

Query: 94  FHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNLLIDYCANAT 136
           F  NW+ TT FHCRLEW+ G L+FD+F S  D  + +YC N T
Sbjct: 67  FKGNWIATTSFHCRLEWEVGYLEFDSFKSAPD-FVTNYCGNQT 108

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL
Match: A0A0A0KIQ4 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1)

HSP 1 Score: 135 bits (341), Expect = 2.70e-38
Identity = 73/135 (54.07%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 1   MAMHRPM-LLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEI 60
           MA  R M LLLVL+L+ S ++SM      K K  K K  KP    PNNP  +FE+F VEI
Sbjct: 1   MAFQRLMPLLLVLLLLTSFNVSMA-----KKKKAKSKTEKPDLPDPNNPIVSFEKFRVEI 60

Query: 61  HNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDA 120
           HNDL M++LD+ C SKDD+ GLH+LFPDE+Q WSF  NW  TT FHCRLEW+ G L+FD+
Sbjct: 61  HNDLNMYLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDS 120

Query: 121 FHSNTDNLLIDYCAN 134
           F S+    + D+C N
Sbjct: 121 FKSDPA-FVTDFCCN 129

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 121 bits (304), Expect = 1.14e-32
Identity = 53/103 (51.46%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 34  KPKKTKPKFLKPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWS 93
           K ++T P+  KP+ P   F +F + I+N+L+M++LD+HC SKDDDLG  +L+P++EQ WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 94  FHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNLLIDYCANAT 136
           F  NWLGTT+FHC+LEW+ G L+FDAF SN    L ++CA ++
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSS 110

[Close]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 122 bits (305), Expect = 1.47e-32
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 5   RPMLLLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHNDLR 64
           R + LL+L+L+    ++M   S+ K +      T P+   PN P  A  +F V I N LR
Sbjct: 8   RRLPLLLLLLLHPVSLTMSVASKKKAE------TGPEQPDPNQPAIALRKFDVHIRNGLR 67

Query: 65  MFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNT 124
           M++LD+HC SKDDDLG+ +++PD+EQRWSF  NWLG+T+FHC+LEW YG ++FDAF  + 
Sbjct: 68  MYLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDL 127

Query: 125 DNLLIDYCANAT 136
            N +  +C +++
Sbjct: 128 -NFVTSFCGDSS 132

[Close]

BLAST of Cp4.1LG04g01530 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.5 bits (132), Expect = 4.0e-08
Identity = 39/121 (32.23%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 9   LLVLVLIASSHISMVTTSRNKNKVPKPKKTKPKFLKPNNPNPAF--ERFTVEIHNDL-RM 68
           L +L++  ++ +S    + +KN +P P         P++ N  F   + TVEI+NDL   
Sbjct: 10  LFILIIFITTKLSQ---ADHKNDIPVPN-------DPSSTNSVFPTSKRTVEINNDLGNQ 69

Query: 69  FILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTD 127
             L  HC SKDDDLG   L P E   +SF   + G T + C   W      FD +  + D
Sbjct: 70  LTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRD 120

[Close]

BLAST of Cp4.1LG04g01530 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 22/65 (33.85%), Postives = 32/65 (49.23%), Query Frame = 0


Query: 68  LDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNL 127
           L  HC SK DDLG+H++   +E  + F  N   +T F C  +W      FD + +  D  
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQG 101

Query: 128 LIDYC 133
           + D C
Sbjct: 102 ICDDC 106

[Close]

BLAST of Cp4.1LG04g01530 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 49.7 bits (117), Expect = 2.2e-06
Identity = 23/60 (38.33%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 68  LDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGLLDFDAFHSNTDNL 127
           L+ HC S DDDLGL IL P+    + F  + +GTT F+C   W      FD +  + D +
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

[Close]

BLAST of Cp4.1LG04g01530 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-06
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 54  RFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHC 107
           R TV+ +ND   ++L  HC SKDDDLG HI    E   W FH N+  +T + C
Sbjct: 48  RITVKNNND---YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFC 97

[Close]

BLAST of Cp4.1LG04g01530 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 47.8 bits (112), Expect = 8.3e-06
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 67  ILDAHCSSKDDDLGLHILFPDEEQRWSFHDNWLGTTDFHCRLEWQYGL---LDFDAFHSN 126
           +L  HC SKDDDLG HIL   ++  ++F DN   TT F C+++        LDF A+ ++
Sbjct: 40  LLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 99

Query: 127 TDNLLIDYC 133
               L   C
Sbjct: 100 WSKALEASC 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	5.6e-07	32.23	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN93	2.1e-06	35.90	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
P0DN92	1.1e-05	36.90	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
O23020	2.4e-05	33.85	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	3.1e-05	38.33	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g01530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933678.1	1.30e-88	93.38	S-protein homolog 2-like [Cucurbita moschata]	[more]
KAE8648167.1	2.32e-43	60.61	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
KAE8648173.1	1.31e-34	57.14	hypothetical protein Csa_018428 [Cucumis sativus]	[more]
XP_023546843.1	1.40e-33	45.80	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600848.1	7.55e-33	46.56	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG04g01530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5H5	6.29e-89	93.38	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A0A0KL79	8.15e-42	66.99	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A0A0KIQ4	2.70e-38	54.07	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1	[more]
A0A1S3BUQ9	1.14e-32	51.46	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]
A0A6J1FMU2	1.47e-32	44.70	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g01530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	4.0e-08	32.23	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.7e-06	33.85	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	2.2e-06	38.33	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.9e-06	45.28	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	8.3e-06	37.68	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 56..125 e-value: 1.1E-16 score: 61.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 39..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..48
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 39..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01530.1	Cp4.1LG04g01530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region