Cp4.1LG04g01520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g01520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG04: 539333 .. 539839 (-)
RNA-Seq Expression	Cp4.1LG04g01520
Synteny	Cp4.1LG04g01520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

mRNA sequence

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

Coding sequence (CDS)

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

Protein sequence

MVMHRPMLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDMLG

Homology

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-09
Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 60  VEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKL-EWQYGLL 119
           V I ND + ++L  HC S+DDDLG HIL   E   W FH N+  ST + C   + Q    
Sbjct: 48  VTIQND-NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKG 107

Query: 120 EFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKD 156
            FE + +N   +    CAN  C W A +DG+Y  ++D
Sbjct: 108 VFEIYRANRDFY---RCAN--CTWKAEKDGIYGYSED 138

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08
Identity = 34/94 (36.17%), Postives = 48/94 (51.06%), Query Frame = 0


Query: 74  HCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVD 133
           HC SK+DDLG   L      +W+F +N L ST F C +    G +    F+ +    L  
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD--VILFH 117

Query: 134 HCANSTCIWSARQDGVYL-NNKDDELVLYDYWDM 167
            C    CIW+A+ DG+YL N+   E VL   W++
Sbjct: 118 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 39/141 (27.66%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 9   LLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL-H 68
           L + +L++  ++  S     + +KN +P P       P   N        +VEI+NDL +
Sbjct: 8   LSLFILIIFITTKLS----QADHKNDIPVPND-----PSSTNSVFPTSKRTVEINNDLGN 67

Query: 69  MFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNH 128
              L  HC SKDDDLG   L P E  ++SF   +   T + C   W      F+ +  + 
Sbjct: 68  QLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHR 127

Query: 129 GKFLVDHCANSTCIWSARQDG 149
                + C +  C+W  R++G
Sbjct: 128 DSGGDNKCESDRCVWKIRRNG 139

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 74  HCTSKDDDLG-LHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLV 133
           HC SK++DLG +++ F D   +W+F +N L ST F C +    G +  + F+ +    L 
Sbjct: 58  HCKSKENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILF 117

Query: 134 DHCANSTCIWSARQDGVYL-NNKDDELVLYDYW 165
             C    C+W+A+ DG+YL N+   E VL + W
Sbjct: 118 HRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-07
Identity = 33/97 (34.02%), Postives = 46/97 (47.42%), Query Frame = 0


Query: 59  SVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLL 118
           +V+ +ND   ++L  HC SKDDDLG HI    E   W FH N+ +ST + C         
Sbjct: 50  TVKNNND---YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFC--------- 109

Query: 119 EFEAFYSNHGKFLVDHCANS-----TCIWSARQDGVY 151
            F     N G F +D           C W+A++D +Y
Sbjct: 110 GFSQGQDNKGVFDIDRAERDFYRCRNCTWNAKKDSLY 134

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 268 bits (686), Expect = 1.42e-89
Identity = 129/168 (76.79%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 1   MVMHRPMLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSV 60
           M M RPMLLLVLVL  IA SHFSM+ T+SK  NKVPKP+KTKPKF +PNNP  AF+ F+V
Sbjct: 1   MAMRRPMLLLVLVL--IAFSHFSML-TTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTV 60

Query: 61  EIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEF 120
           EIHNDL MFILD+HC+SKDDDLGLHILFPDEEQ+WSFHDNWL +T+FHC+LEWQYGLLEF
Sbjct: 61  EIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEF 120

Query: 121 EAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDMLG 168
           +AF+SN    L+D+CAN+TCIWSARQDGVYLNN+DD+LV Y+YWDMLG
Sbjct: 121 DAFHSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDMLG 165

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 183 bits (465), Expect = 4.76e-56
Identity = 93/158 (58.86%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 10  LVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMF 69
           L+LV++L+A    SM     K KNK P P     K   PNNP   F+ F+VEIHNDL MF
Sbjct: 7   LLLVILLLAPLRTSMA--KKKAKNKSPTP-----KLSVPNNPVVMFERFTVEIHNDLRMF 66

Query: 70  ILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGK 129
           ILDSHC SKDDDLGLHILFPDE+Q+WSF  NW+ +T FHC+LEW+ G LEF++F S    
Sbjct: 67  ILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPD- 126

Query: 130 FLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDML 167
           F+ ++C N TCIWSARQDGVYLNN   E V Y+YW+M+
Sbjct: 127 FVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYWEMI 156

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163 bits (412), Expect = 6.42e-48
Identity = 81/165 (49.09%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 3   MHRPMLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEI 62
           M R  LLL+L+L+L   S    VA+  K         +T P+ P+PN P  A + F V I
Sbjct: 7   MRRLPLLLLLLLLLHLVSLTMSVASKKK--------AETGPEQPDPNQPAIALRKFDVHI 66

Query: 63  HNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEA 122
            N L M++LDSHC SKDDDLG+H+++PD+EQ+WSF  NWL ST+FHCKLEW YG +EF+A
Sbjct: 67  RNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDA 126

Query: 123 FYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDML 167
           F ++   F+   C +S+C+W+A+QDGVYL +++ +LV  D+W+ML
Sbjct: 127 F-ADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEML 162

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 161 bits (408), Expect = 1.27e-47
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 37  KPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWS 96
           K ++T P+ P+P+ P   F  F++ I+N+L M++LDSHC SKDDDLG  +L+P++EQ+WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 97  FHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDD 156
           F  NWL +T+FHCKLEW+ G LEF+AF SN  KFL + CA S+C WSARQDGVYL N++ 
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 157 ELVLYDYWDML 167
           ++V    W+M+
Sbjct: 129 QVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156 bits (395), Expect = 2.29e-45
Identity = 67/131 (51.15%), Postives = 96/131 (73.28%), Query Frame = 0


Query: 37  KPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWS 96
           K  +T P+ P+PN P  A + F V I N L M++LDSHC SKDDDLG+ +++PD+EQ WS
Sbjct: 31  KKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVRVIYPDDEQRWS 90

Query: 97  FHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDD 156
           F  NWL ST+FHCKLEW YG +EF+AF  +   F+   C NS+C+W+A+QDG+YL +++ 
Sbjct: 91  FRGNWLGSTNFHCKLEWAYGFVEFDAF-DDDLNFVTSFCGNSSCVWTAKQDGLYLADQNG 150

Query: 157 ELVLYDYWDML 167
           +LV  D+W+++
Sbjct: 151 QLVFKDHWELV 160

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 6.88e-90
Identity = 129/168 (76.79%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 1   MVMHRPMLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSV 60
           M M RPMLLLVLVL  IA SHFSM+ T+SK  NKVPKP+KTKPKF +PNNP  AF+ F+V
Sbjct: 1   MAMRRPMLLLVLVL--IAFSHFSML-TTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTV 60

Query: 61  EIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEF 120
           EIHNDL MFILD+HC+SKDDDLGLHILFPDEEQ+WSFHDNWL +T+FHC+LEWQYGLLEF
Sbjct: 61  EIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEF 120

Query: 121 EAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDMLG 168
           +AF+SN    L+D+CAN+TCIWSARQDGVYLNN+DD+LV Y+YWDMLG
Sbjct: 121 DAFHSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDMLG 165

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 180 bits (456), Expect = 2.83e-55
Identity = 86/138 (62.32%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 30  KYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFP 89
           K KNK P P     K   PNNP   F+ F+VEIHNDL MFILDSHC SKDDDLGLHILFP
Sbjct: 5   KAKNKSPTP-----KLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFP 64

Query: 90  DEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGV 149
           DE+Q+WSF  NW+ +T FHC+LEW+ G LEF++F S    F+ ++C N TCIWSARQDGV
Sbjct: 65  DEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPD-FVTNYCGNQTCIWSARQDGV 124

Query: 150 YLNNKDDELVLYDYWDML 167
           YLNN   E V Y+YW+M+
Sbjct: 125 YLNNAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 161 bits (408), Expect = 6.13e-48
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 37  KPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWS 96
           K ++T P+ P+P+ P   F  F++ I+N+L M++LDSHC SKDDDLG  +L+P++EQ+WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 97  FHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDD 156
           F  NWL +T+FHCKLEW+ G LEF+AF SN  KFL + CA S+C WSARQDGVYL N++ 
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 157 ELVLYDYWDML 167
           ++V    W+M+
Sbjct: 129 QVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 4.48e-45
Identity = 66/131 (50.38%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 37  KPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWS 96
           K  +T P+ P+PN P  A + F V I N L M++LDSHC SKDDDLG+ +++PD+EQ WS
Sbjct: 31  KKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVRVIYPDDEQRWS 90

Query: 97  FHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDD 156
           F  NWL ST+FHCKLEW YG +EF+AF ++   F+   C +S+C+W+A+QDG+YL +++ 
Sbjct: 91  FRGNWLGSTNFHCKLEWAYGFVEFDAF-ADDLNFVTSFCGDSSCVWTAKQDGLYLADQNG 150

Query: 157 ELVLYDYWDML 167
           +LV  D+W+++
Sbjct: 151 QLVFKDHWELV 160

[Close]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1)

HSP 1 Score: 154 bits (389), Expect = 6.41e-45
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 57  HFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYG 116
           H+ +EIHNDL M++LDSHC SKD+DLGLHILFP E Q+WSF DN  ++T F C LEW+ G
Sbjct: 39  HYQIEIHNDLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENG 98

Query: 117 LLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDML 167
           LLEF++F +NH  FL + C N TC WSARQDGVYL N   E V  DYWDML
Sbjct: 99  LLEFDSFKTNHN-FLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09
Identity = 34/94 (36.17%), Postives = 48/94 (51.06%), Query Frame = 0


Query: 74  HCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVD 133
           HC SK+DDLG   L      +W+F +N L ST F C +    G +    F+ +    L  
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD--VILFH 117

Query: 134 HCANSTCIWSARQDGVYL-NNKDDELVLYDYWDM 167
            C    CIW+A+ DG+YL N+   E VL   W++
Sbjct: 118 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR 10
Match: AT5G38440.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-09
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 70  ILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEA-FYSNHG 129
           +L  HCTS +D+LG H L P E  ++SFHD+ + S DF+C+L WQ    +F A F +  G
Sbjct: 41  VLKIHCTS-EDNLGFHFLRPGETYDFSFHDSIVRS-DFYCEL-WQGPNFKFHASFMAYQG 100

Query: 130 KFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYW 165
             L+ H       W AR+DG+Y  +  +   L   W
Sbjct: 101 GGLIVHYGKKN-FWDAREDGIYFTHGKETPKLEYKW 132

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-09
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 49  NNPYSAFQHFSVEIHNDL-HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDF 108
           +N +       V + N L H  +L  HC SKDDDLG HIL   ++  ++F DN   +T F
Sbjct: 18  SNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSF 77

Query: 109 HCKLEWQYGL---LEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLN 153
            C+++        L+F A+ ++  K L      ++C W  R+DG+Y +
Sbjct: 78  SCQMDQGPNFKHHLDFVAYETSWSKAL-----EASCKWIGREDGIYFS 120

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 32/95 (33.68%), Postives = 43/95 (45.26%), Query Frame = 0


Query: 70  ILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGK 129
           +L  HC SKDDDLG+H +    E N+ F D+    T+F C L    G      F +   K
Sbjct: 41  VLTVHCKSKDDDLGIHTVARSYEYNFKFEDSVFGRTEFFCTLMHGVGSKYSVTFTAYKAK 100

Query: 130 FLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYW 165
                      IW A  DG+YL ++D + V    W
Sbjct: 101 PAFVASTGVIKIWDALDDGIYLTDEDHDFVKIYGW 135

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 39/141 (27.66%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 9   LLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL-H 68
           L + +L++  ++  S     + +KN +P P       P   N        +VEI+NDL +
Sbjct: 8   LSLFILIIFITTKLS----QADHKNDIPVPND-----PSSTNSVFPTSKRTVEINNDLGN 67

Query: 69  MFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNH 128
              L  HC SKDDDLG   L P E  ++SF   +   T + C   W      F+ +  + 
Sbjct: 68  QLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHR 127

Query: 129 GKFLVDHCANSTCIWSARQDG 149
                + C +  C+W  R++G
Sbjct: 128 DSGGDNKCESDRCVWKIRRNG 139

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DN92	7.4e-09	39.18	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F4JLS0	3.7e-08	36.17	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
F4JLQ5	2.4e-07	27.66	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q2HQ46	3.1e-07	35.48	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9FI84	5.3e-07	34.02	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g01520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933678.1	1.42e-89	76.79	S-protein homolog 2-like [Cucurbita moschata]	[more]
KAE8648167.1	4.76e-56	58.86	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
XP_023546843.1	6.42e-48	49.09	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008453055.1	1.27e-47	54.20	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]
KAG6600848.1	2.29e-45	51.15	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG04g01520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5H5	6.88e-90	76.79	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A0A0KL79	2.83e-55	62.32	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A1S3BUQ9	6.13e-48	54.20	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]
A0A6J1FMU2	4.48e-45	50.38	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1	[more]
A0A0A0KSN2	6.41e-45	63.96	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g01520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	2.6e-09	36.17	S-protein homologue 1	[more]
AT5G38440.1	3.4e-09	38.54	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.5e-09	32.41	Plant self-incompatibility protein S1 family	[more]
AT2G06090.1	5.8e-09	33.68	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.7e-08	27.66	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 60..158 e-value: 2.2E-21 score: 76.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 42..154
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 42..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01520.1	Cp4.1LG04g01520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region