Cp4.1LG04g01320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g01320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein transport protein SEC13 homolog B-like
Location	Cp4.1LG04: 812021 .. 813762 (-)
RNA-Seq Expression	Cp4.1LG04g01320
Synteny	Cp4.1LG04g01320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGTTGAAAAAGGAAAAGAAAAACCGTCCAATTGCTGACCGGTTGTCTTGTTTGCGTCAGTATCTGATATATTGCGAGGCCAGCCGCTTGCAACCAGAACACTCCACGAGGAAGCGGACCTCAACAAGCAGATCGGCGGCCGAACTCTGGTTCTGCCCCGGCGATTTGTTTTCTCGGAGCTCTACTATCCGACTATCTCTACGGTAATTCAAATCCCATGTTCTTCCGATTAGTGCTGAATTTTGCTCTATGCTGTTTGATTTATCATCTGTTGCCAATTTCCAGATCTGCTTCTATTTTGATTTCCGCTGCTTGTAGAGCCTTTGAGCCTGTTCATTTCGTTAACACTTTAGCTTAAATCGAGTGATTCTGTCTCTATCCATGTCAACAATGTTCGATCTATGAATGAATCTGTGTTCTGAGCTAGCGCATGAGGCTTTTGTTATTGTTTGTGTGTAAATATGTCACGAACGCATGAGGCTTTTGCAACAAAGTGCTGGACATTTCATCTTTAGTATTTGCTTGCAAGCATCATTCATCATTCATCATTTGAGTTGTTTTCGCTAGATCTGCAATAGCCACTGTTAACAATCGAACTTAAAAATGAAGAATGGGTAAAGAAGCGCCTCTTAATTGGTTGTTTCGGACTCTATGGATGTGATTATTGATTATGTTGGCTTTTCTTTTTTATTGATGGAACTTTCCTTCTAATTTATTTCCAGAAGTTGAATGGATTTTGCATAGTTTTTTTTATATAAATTCTTTTTCTATCATAGATAAATATATAAGGATACTTTCTAGAGGTTGGAGGAGAAGGGTAAAAGGAATTTATAGAGTGAAACGAAATCCTGTACAATGTCTTCACACAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAAATGGATTACTATGGAAAACGCATAGCAACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTAGCAAAAACTCTGATTCACAACTCTTAGCCTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGTTAGCTTCCAGCTCTTACGATGGTCAAGTGATAATATGGAAGGAAGGAAATCAAAATCAATGGGTGCAGGCTCATGTTTTCAGTGCACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCATGAACTTGGCCTCTGCTTGGCCTGTGGATCATCTGATGGGAGTATATCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCTGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAATTGGATCCAGTTCAGTGGACCCTGTTTGGAAGCTAGCTTCTGGGGGTTTCGATAGTACGGTGAAAGTGTGGACGCTAAAAGATGGAAGCTGGAGGAGGGACTCCTCCCCTGCCCTTCAGATGCACACTGATTGGGTAAGGGACGTGGCTTGGTCGCCAAACCTAGGCCTTCAAAAATCCACCATAGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAAATGGGAAGGCATAGTGATGAATGATTTTAAGACTCCAATCTGGAAGGTTTCATGGTCATTGACCGGAGACTTATTGGCTGTTGCTGATGGGAATAACACTGTTACATTGTGGAAAGAAGCAGTCGATGGTAAATGGCAG

mRNA sequence

AAGGGTTGAAAAAGGAAAAGAAAAACCGTCCAATTGCTGACCGGTTGTCTTGTTTGCGTCAGTATCTGATATATTGCGAGGCCAGCCGCTTGCAACCAGAACACTCCACGAGGAAGCGGACCTCAACAAGCAGATCGGCGGCCGAACTCTGGTTCTGCCCCGGCGATTTGTTTTCTCGGAGCTCTACTATCCGACTATCTCTACGAGTGAAACGAAATCCTGTACAATGTCTTCACACAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAAATGGATTACTATGGAAAACGCATAGCAACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTAGCAAAAACTCTGATTCACAACTCTTAGCCTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGTTAGCTTCCAGCTCTTACGATGGTCAAGTGATAATATGGAAGGAAGGAAATCAAAATCAATGGGTGCAGGCTCATGTTTTCAGTGCACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCATGAACTTGGCCTCTGCTTGGCCTGTGGATCATCTGATGGGAGTATATCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCTGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAATTGGATCCAGTTCAGTGGACCCTGTTTGGAAGCTAGCTTCTGGGGGTTTCGATAGTACGGTGAAAGTGTGGACGCTAAAAGATGGAAGCTGGAGGAGGGACTCCTCCCCTGCCCTTCAGATGCACACTGATTGGGTAAGGGACGTGGCTTGGTCGCCAAACCTAGGCCTTCAAAAATCCACCATAGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAAATGGGAAGGCATAGTGATGAATGATTTTAAGACTCCAATCTGGAAGGTTTCATGGTCATTGACCGGAGACTTATTGGCTGTTGCTGATGGGAATAACACTGTTACATTGTGGAAAGAAGCAGTCGATGGTAAATGGCAG

Coding sequence (CDS)

ATGTCTTCACACAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAAATGGATTACTATGGAAAACGCATAGCAACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTAGCAAAAACTCTGATTCACAACTCTTAGCCTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGTTAGCTTCCAGCTCTTACGATGGTCAAGTGATAATATGGAAGGAAGGAAATCAAAATCAATGGGTGCAGGCTCATGTTTTCAGTGCACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCATGAACTTGGCCTCTGCTTGGCCTGTGGATCATCTGATGGGAGTATATCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCTGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAATTGGATCCAGTTCAGTGGACCCTGTTTGGAAGCTAGCTTCTGGGGGTTTCGATAGTACGGTGAAAGTGTGGACGCTAAAAGATGGAAGCTGGAGGAGGGACTCCTCCCCTGCCCTTCAGATGCACACTGATTGGGTAAGGGACGTGGCTTGGTCGCCAAACCTAGGCCTTCAAAAATCCACCATAGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAAATGGGAAGGCATAGTGATGAATGATTTTAAGACTCCAATCTGGAAGGTTTCATGGTCATTGACCGGAGACTTATTGGCTGTTGCTGATGGGAATAACACTGTTACATTGTGGAAAGAAGCAGTCGATGGTAAATGGCAG

Protein sequence

MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVWQVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCLACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLASGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIWSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ

Homology

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BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-136
Identity = 222/295 (75.25%), Postives = 257/295 (87.12%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           M   KIETGH+D+VHDVQMDYYGKRIATASSD TIKI  VS N  SQ LA+L+GH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           +VAWAHPK+GS+LAS SYDGQVI+WKEGNQNQW Q HVF+ HKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDG+ISVF AR+DGGWD ++I+QAH VGVTSVSW P TAPG+L+ S  +DPV+KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG D+TVKVW L +GSW+ D  PALQ HTDWVRDVAW+PNLGL KSTIASGSQDG VII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 296
           W+V KEG +WEG V+ DF TP+W+VSWSLTG+LLAV+DGNN VT+WKEAVDG+W+
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWE 295

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BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-134
Identity = 217/295 (73.56%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           M   KIETGH D +HDV MDYYGKR+ATASSD TIKI  VS +  SQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF+ HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+L+ S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PAL  HTDWVRDVAW+PNLGL KSTIASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 296
           W++ KEG +WEG V+ DFKTP+W+VSWSLTG+LLAV+DGNN VT+WKE+VDG+W+
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWE 295

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BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-87
Identity = 153/294 (52.04%), Postives = 203/294 (69.05%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N    L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   W + H  S H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSS---VDPVWKLASG 185
           DG+IS+     +G W+  +I  AH++G  +VSW P   PGSLI   S    + + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQK--LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 SV-AKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKW 295
           +     G  W   +++ F   +W VSWS+T ++LAV+ G+N VTLWKE+VDG+W
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297

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BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-87
Identity = 153/294 (52.04%), Postives = 203/294 (69.05%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N    L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   W + H  S H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSS---VDPVWKLASG 185
           DG+IS+     +G W+  +I  AH++G  +VSW P   PGSLI   S    + + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQK--LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 SV-AKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKW 295
           +     G  W   +++ F   +W VSWS+T ++LAV+ G+N VTLWKE+VDG+W
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.9e-86
Identity = 151/294 (51.36%), Postives = 202/294 (68.71%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N    L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILVADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   W + H  + H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSS---VDPVWKLASG 185
           DG+IS+      G W+  +I  AH++G  +VSW P   PGSLI   S    + + K ASG
Sbjct: 128 DGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V +W
Sbjct: 188 GCDNLIKLWKEEEDGQWKEEQK--LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVW 247

Query: 246 SV-AKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKW 295
           +     G  W   +++ F   +W VSWS+T ++LAV+ G+N VTLWKE+VDG+W
Sbjct: 248 TCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297

[Close]

BLAST of Cp4.1LG04g01320 vs. NCBI nr
Match: XP_023531332.1 (protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612 bits (1578), Expect = 3.57e-221
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. NCBI nr
Match: XP_022933529.1 (protein transport protein SEC13 homolog B-like [Cucurbita moschata])

HSP 1 Score: 611 bits (1575), Expect = 1.02e-220
Identity = 294/295 (99.66%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. NCBI nr
Match: XP_022971254.1 (protein transport protein SEC13 homolog B-like [Cucurbita maxima])

HSP 1 Score: 605 bits (1561), Expect = 1.40e-218
Identity = 292/295 (98.98%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSK SDSQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKKSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQ QWVQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQYQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. NCBI nr
Match: KAG6588399.1 (Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607 bits (1566), Expect = 5.04e-218
Identity = 292/295 (98.98%), Postives = 294/295 (99.66%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW
Sbjct: 83  MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 142

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 143 QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 202

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 203 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 262

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGL+KS IASGSQDGTVII
Sbjct: 263 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLKKSNIASGSQDGTVII 322

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 323 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 377

[Close]

BLAST of Cp4.1LG04g01320 vs. NCBI nr
Match: XP_022983840.1 (protein transport protein SEC13 homolog B-like [Cucurbita maxima])

HSP 1 Score: 579 bits (1493), Expect = 3.25e-208
Identity = 274/295 (92.88%), Postives = 286/295 (96.95%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MS+ KIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISVSKNS SQLLA+L+GH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW+QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGPTTAPGSL+GS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSV K+GGKWEG VMNDFKTPIWKVSWSLTGDLLAVADGNN  TLWKEAVDGKWQ
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL
Match: A0A6J1F006 (protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111440929 PE=3 SV=1)

HSP 1 Score: 611 bits (1575), Expect = 4.96e-221
Identity = 294/295 (99.66%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL
Match: A0A6J1I814 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111470029 PE=3 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 6.76e-219
Identity = 292/295 (98.98%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSK SDSQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKKSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQ QWVQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQYQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL
Match: A0A6J1J720 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111482335 PE=3 SV=1)

HSP 1 Score: 579 bits (1493), Expect = 1.57e-208
Identity = 274/295 (92.88%), Postives = 286/295 (96.95%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MS+ KIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISVSKNS SQLLA+L+GH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW+QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGPTTAPGSL+GS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSV K+GGKWEG VMNDFKTPIWKVSWSLTGDLLAVADGNN  TLWKEAVDGKWQ
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL
Match: A0A6J1FB15 (protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111442431 PE=3 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 3.04e-206
Identity = 272/295 (92.20%), Postives = 283/295 (95.93%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MS  KIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISVSKNS SQLLA+L+GH+GPVW
Sbjct: 1   MSEQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW+QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGP TAPGSL+GS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPITAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WSV K+GGKWEG VMNDFKTPIWKVSWSLTG LLAVADGNN  TLWKEAVDGKWQ
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGHLLAVADGNNHFTLWKEAVDGKWQ 295

[Close]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL
Match: A0A5A7UJ18 (Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00140 PE=3 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 1.34e-202
Identity = 269/295 (91.19%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKI+SVSKNS SQ+LA+L+GHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVSVSKNSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW QAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNN IEQAH VGVTSVSWGPTTAPGSL+GSSS DPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDSS +LQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSLSLQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 295
           WS  KEGGKW+  +MNDFKTPIWKVSWSLTGDLLAV+DGNN +TLWKEA  GKWQ
Sbjct: 241 WST-KEGGKWDATLMNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEAASGKWQ 294

[Close]

BLAST of Cp4.1LG04g01320 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 487.3 bits (1253), Expect = 8.9e-138
Identity = 222/295 (75.25%), Postives = 257/295 (87.12%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           M   KIETGH+D+VHDVQMDYYGKRIATASSD TIKI  VS N  SQ LA+L+GH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           +VAWAHPK+GS+LAS SYDGQVI+WKEGNQNQW Q HVF+ HKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACGSSDG+ISVF AR+DGGWD ++I+QAH VGVTSVSW P TAPG+L+ S  +DPV+KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG D+TVKVW L +GSW+ D  PALQ HTDWVRDVAW+PNLGL KSTIASGSQDG VII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 296
           W+V KEG +WEG V+ DF TP+W+VSWSLTG+LLAV+DGNN VT+WKEAVDG+W+
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWE 295

[Close]

BLAST of Cp4.1LG04g01320 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-135
Identity = 217/295 (73.56%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           M   KIETGH D +HDV MDYYGKR+ATASSD TIKI  VS +  SQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF+ HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+L+ S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PAL  HTDWVRDVAW+PNLGL KSTIASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 296
           W++ KEG +WEG V+ DFKTP+W+VSWSLTG+LLAV+DGNN VT+WKE+VDG+W+
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWE 295

[Close]

BLAST of Cp4.1LG04g01320 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-135
Identity = 217/295 (73.56%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60
           M   KIETGH D +HDV MDYYGKR+ATASSD TIKI  VS +  SQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF+ HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+L+ S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PAL  HTDWVRDVAW+PNLGL KSTIASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQ 296
           W++ KEG +WEG V+ DFKTP+W+VSWSLTG+LLAV+DGNN VT+WKE+VDG+W+
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWE 295

[Close]

BLAST of Cp4.1LG04g01320 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-14
Identity = 76/275 (27.64%), Postives = 120/275 (43.64%), Query Frame = 0


Query: 10  HQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVWQVAWAHPKF 69
           H+  +  ++ +  G  + T S D T  +  V      Q       H GP   V W +   
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQ---QFEFHSGPTLDVDWRN--- 423

Query: 70  GSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCLACGSSDGSI 129
               A+SS D  + + K G       A  F+ H+  VN + W P   G  LA  S D + 
Sbjct: 424 NVSFATSSTDSMIYLCKIGETR---PAKTFTGHQGEVNCVKWDP--TGSLLASCSDDSTA 483

Query: 130 SVF-IARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLASGGFDSTV 189
            ++ I +S    D  +    H+  + ++ W PT       G+++ +    LAS  FDSTV
Sbjct: 484 KIWNIKQSTFVHDLRE----HTKEIYTIRWSPTGP-----GTNNPNKQLTLASASFDSTV 543

Query: 190 KVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIWSVAKEGG 249
           K+W  + G        +   H + V  +A+SPN       IASGS D ++ IWS+ KEG 
Sbjct: 544 KLWDAELGK----MLCSFNGHREPVYSLAFSPN----GEYIASGSLDKSIHIWSI-KEGK 603

Query: 250 KWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTV 284
             +    N     I++V W+  G+ +A    +N+V
Sbjct: 604 IVKTYTGNG---GIFEVCWNKEGNKIAACFADNSV 606

[Close]

BLAST of Cp4.1LG04g01320 vs. TAIR 10
Match: AT2G26060.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-13
Identity = 76/307 (24.76%), Postives = 122/307 (39.74%), Query Frame = 0


Query: 9   GHQDMVHDV-------QMDYYGKRIATASSDFTIKIISVSKNSDSQLLASL--SGHKGPV 68
           GH D V  V         D     +A+ S D T++I   S  S S    ++    H   V
Sbjct: 18  GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTV 77

Query: 69  WQVAWAHPKFGSLLASSSYDGQVIIWKE-GNQNQWVQAHVFSAHKSSVNSIAWAPHELGL 128
              AW+    G LLA++S+DG   IWK  G++ + +       H++ V S++W  +  G 
Sbjct: 78  RSCAWS--PSGQLLATASFDGTTGIWKNYGSEFECIS--TLEGHENEVKSVSW--NASGS 137

Query: 129 CLACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWK 188
           CLA  S D S+ ++       +D   +   H+  V  V W PT              +  
Sbjct: 138 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT--------------MDV 197

Query: 189 LASGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTV 248
           L S  +D+T+KVW  +D          L    +      WS +       + + S D T+
Sbjct: 198 LFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTL 257

Query: 249 IIWSV-------AKEGGKWEGI--VMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLW--- 293
            IW          +E   W  +  +       I+   WS   D++A   G+N + L+   
Sbjct: 258 KIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS-RDDIIASGAGDNAIRLFVDS 303

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	1.3e-136	75.25	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	2.0e-134	73.56	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	3.1e-87	52.04	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	3.1e-87	52.04	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	5.9e-86	51.36	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g01320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531332.1	3.57e-221	100.00	protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933529.1	1.02e-220	99.66	protein transport protein SEC13 homolog B-like [Cucurbita moschata]	[more]
XP_022971254.1	1.40e-218	98.98	protein transport protein SEC13 homolog B-like [Cucurbita maxima]	[more]
KAG6588399.1	5.04e-218	98.98	Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022983840.1	3.25e-208	92.88	protein transport protein SEC13 homolog B-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG04g01320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F006	4.96e-221	99.66	protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I814	6.76e-219	98.98	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1J720	1.57e-208	92.88	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FB15	3.04e-206	92.20	protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5A7UJ18	1.34e-202	91.19	Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Cp4.1LG04g01320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30050.1	8.9e-138	75.25	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	1.4e-135	73.56	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G01340.2	1.4e-135	73.56	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G67320.1	3.6e-14	27.64	WD-40 repeat family protein	[more]
AT2G26060.2	2.4e-13	24.76	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 73..87 score: 35.16 coord: 179..193 score: 39.89 coord: 229..243 score: 36.8
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 199..242 e-value: 2.3E-5 score: 33.8 coord: 139..192 e-value: 0.27 score: 20.3 coord: 2..39 e-value: 0.4 score: 19.5 coord: 248..287 e-value: 0.71 score: 17.9 coord: 92..133 e-value: 0.0012 score: 28.1 coord: 45..86 e-value: 1.2E-7 score: 41.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 8..37 e-value: 0.12 score: 13.3 coord: 147..191 e-value: 0.046 score: 14.6 coord: 96..131 e-value: 0.0028 score: 18.5 coord: 209..242 e-value: 4.0E-4 score: 21.1 coord: 47..86 e-value: 5.5E-5 score: 23.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 52..86 score: 10.976305
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 206..243 score: 12.079106
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 99..132 score: 8.837541
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..295 e-value: 5.2E-94 score: 316.7
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..295
None	No IPR available	PANTHER	PTHR11024:SF18	BNAA05G12310D PROTEIN	coord: 1..295
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 206..243 score: 10.07378
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 52..86 score: 9.203785
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 7..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01320.1	Cp4.1LG04g01320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090114	COPII-coated vesicle budding
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity