Cp4.1LG04g01020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTCAGGCGCCAGGAACAAGGAGGAGCGAAAATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGGTTTGTTGTTTCTTTCAATGTTCTCTTCTCTGTTTGATCGAGTTATTTCTTGGCTGATTTGATATCCGTAAAGTCTATATGGTTTAAGAATTAGGGTTCATATAGCAACCATTTTAGGGGAACCAGTGCTGTGAATTTCAATTGTCTTTGCAATTTTTATCTCCTCTTCTTCTTGAACAATTTGAATAGAAATGGCATTCTGGACTTAAAGTGCGTTCGCAGTTAGGAAAACAATTACATTGTTTGTTGGAGAAATGAAATTCTTCTGTTGAAACGTAGTTTAGAGCTACTATAGAAAATTTATGGGTTGATCAACTGCAGTGTGGATGAACAGTTTGGCGAATAGACATTTTGTGAAAACTCTGTTCTTTTTATTTTTGACAAGAAACAAAACTTATCATGAATTAATGAAACAAAGGATCAGAACCCCCAAAATAAATTGAATCTGAAAAGAGAATCCAACGAAAAAAAACTTAGATGTGTTGGATGAACATCGGCTAATTTAGGGAATGATCATGGGTTTGTAATCAAGGAATACTCCATTGGTTTGAGGTCTTTTGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGTTCATCTAACATGGTATCGAGCCATGCCCTAAACTTAGCCATGCCAATAGAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAAAAAAAAAAAAAGAGTNAAAAAAAAAAAAAAAGAGTCGAGACTCCTCGAAGGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAGCCTCAATTAAGGGAAGGTGTACTTTGTTCGAGGGGAGGTGTTGGATGAAAGTCCCACATCGACTAATTTAGGTAATGATCAAGGGTTTATGATCAAGAATACTCTCTCCATTGGTTTGAGGCCTTTTGGGGAAGTCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGAGTCTTGTTCATCTAACAAGATGAACACCAATGGGAAGCATGAAATCTGGAGGACTCAGTGATCAAACCAATGAAGAACCTTTGAAGCCAAACCATATGTAAAACCAATATAAAAAAGCCTCCCTTGCGTTAGAGAAGAGACTGAAAGAAATTCCTCTAATGCAATTGAAAGCTCGTGAAATGGATTTTTAAAAGCAAACAATGGTATGAATATCTATCAAACTGTGAAAAAAGGGCTCCAAAAACACCTTTGCACCAAAAAGACTGCAGCCTTAACCAAAGCTTAAAGCCTCAAACAGGCAACCAAACGAAACTGAAACACTTGAAAGAAGAAACAAAACACCAAAATCCTTAGAGAAACCAACCAGAGCTTGGCAAAAGTGAACACTGACACAACTTTCGTCATGAACCAGTGAAGGAATTCCATGAAACTCGACACCATTGGCTTCACTAAGTGAACCGAAATTGGCTGGCATGGAGGGTGGAGGGTAAGTGAAGGGTCATCAACGGATGAAGAGGCAACTTGCTGATTAGAAGGCACCAAAAGCCTCTTACAACATTCTTTCTTCAATAAAATTTGAATTCAAAGAATTTTCCTCAAGACATGGTTGGTATGACGAATACGCCCCAACTTCACGGATATAAGACGAAGGATAGGCTGGATTAGGACCCTTTTTTACATCTTTAACATTCCGGGACTTCGAAGACTCAAAAGGCATAATTAGCCTTTAGGTCTCATCGTGCTAGATTAAGTCCCTTTTCGATATAGTTTGACTCTTTTTGTTTGGAGTTGGTTTTGCGTATTTTCTTGTATTTTCTAATTTTTTTAATGATAGTCCATTAAAAAAAAAAAGCTAAGGTTAACTGTTTTTTCTGATCGGATCTTGTTTGTGAAGACGAATATGTTGGCATCTCGAATCCTGTTTAGTTTTCTGTATGCGAACTTGACTAATGGCTTCGATTTCTGCATTCCACGTAAATGTCGAATATTAGAAAATCCTTAGACCAAAGTAGAATTAAAAAAATTGAACCATTGGATACACAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGGTAAAGTATATGGATTGACATTCTTGATCTTATCTCAGAATGAATTACTCTTGCTTCTTAAATTCTAATACTCATATTCATGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGAATTCACATCTAACAGGTTTATTTTGAAATTTTATCCATGCAAGTTTTTTGTTACACCGTTCTAAATGTTGCAGTTCCACTAGTTTTTATTTGGTTCATCAATATAGAGGCTTTTGTTCTGCTTTCGTTTCACAGGTTTAGAGTTTAAACAAGATTATAGTGTCTGTGTGAGTTAGTAGTAAGAGCTTAAAATATGCATAACCAAATATAAATCAAAATACATCGAGTTATATAATTATCTCTTGGATATGTATGCACATGCATGTAAACCGAGCTAGGATTGGTACCTATTTATTAAACTTAGAGGGTGTTCATCGTCTAGTTGGGTTGGGTTGGGTTGAAACAATTTTTTGGACCAACCCCAAAAGTTTAGGATGGTTGAATTGGTAACCCAACTTAACCTGAAAACTCCCGTTGGGTCTTGAGTTTTATTTTTTTTAAAGAAGTTTTATTTATCCCAACTCATAATTATTCGATACAATTTTAGATAAAATATATTAAAATTTTACAAATAAACATAAATCAATCTATAATCATTAAAAAAAATAAAAAAAAATAAATTCATCAACAACAGAGAAAATTGTAACCTTTTACACGG AGTTTCAGGCGCCAGGAACAAGGAGGAGCGAAAATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGAATTCACATCTAACAGGTTTATTTTGAAATTTTATCCATGCAAGTTTTTTGTTACACCGTTCTAAATGTTGCAGTTCCACTAGTTTTTATTTGGTTCATCAATATAGAGGCTTTTGTTCTGCTTTCGTTTCACAGGTTTAGAGTTTAAACAAGATTATAGTGTCTGTGTGAGTTAGTAGTAAGAGCTTAAAATATGCATAACCAAATATAAATCAAAATACATCGAGTTATATAATTATCTCTTGGATATGTATGCACATGCATGTAAACCGAGCTAGGATTGGTACCTATTTATTAAACTTAGAGGGTGTTCATCGTCTAGTTGGGTTGGGTTGGGTTGAAACAATTTTTTGGACCAACCCCAAAAGTTTAGGATGGTTGAATTGGTAACCCAACTTAACCTGAAAACTCCCGTTGGGTCTTGAGTTTTATTTTTTTTAAAGAAGTTTTATTTATCCCAACTCATAATTATTCGATACAATTTTAGATAAAATATATTAAAATTTTACAAATAAACATAAATCAATCTATAATCATTAAAAAAAATAAAAAAAAATAAATTCATCAACAACAGAGAAAATTGTAACCTTTTACACGG ATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGA MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPHRSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF Homology
BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.7e-08 Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05 Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05 Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05 Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 517 bits (1332), Expect = 5.90e-184 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 493 bits (1268), Expect = 2.67e-174 Identity = 278/290 (95.86%), Postives = 281/290 (96.90%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima]) HSP 1 Score: 489 bits (1258), Expect = 8.92e-173 Identity = 276/290 (95.17%), Postives = 280/290 (96.55%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: KAG7022267.1 (yqeI [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 459 bits (1181), Expect = 5.72e-161 Identity = 260/275 (94.55%), Postives = 265/275 (96.36%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]) HSP 1 Score: 367 bits (942), Expect = 1.12e-124 Identity = 215/293 (73.38%), Postives = 245/293 (83.62%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1) HSP 1 Score: 489 bits (1258), Expect = 4.32e-173 Identity = 276/290 (95.17%), Postives = 280/290 (96.55%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1) HSP 1 Score: 367 bits (942), Expect = 5.41e-125 Identity = 215/293 (73.38%), Postives = 245/293 (83.62%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1) HSP 1 Score: 362 bits (930), Expect = 3.03e-123 Identity = 215/292 (73.63%), Postives = 243/292 (83.22%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A6J1EIK7 (uncharacterized protein LOC111434725 OS=Cucurbita moschata OX=3662 GN=LOC111434725 PE=4 SV=1) HSP 1 Score: 332 bits (850), Expect = 5.24e-112 Identity = 192/201 (95.52%), Postives = 193/201 (96.02%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1) HSP 1 Score: 262 bits (669), Expect = 2.78e-85 Identity = 136/162 (83.95%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-34 Identity = 125/305 (40.98%), Postives = 168/305 (55.08%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33 Identity = 115/272 (42.28%), Postives = 156/272 (57.35%), Query Frame = 0
BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29 Identity = 106/248 (42.74%), Postives = 141/248 (56.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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