Cp4.1LG04g01020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g01020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionCRM domain-containing protein
LocationCp4.1LG04: 944707 .. 948358 (-)
RNA-Seq ExpressionCp4.1LG04g01020
SyntenyCp4.1LG04g01020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCAGGCGCCAGGAACAAGGAGGAGCGAAAATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGGTTTGTTGTTTCTTTCAATGTTCTCTTCTCTGTTTGATCGAGTTATTTCTTGGCTGATTTGATATCCGTAAAGTCTATATGGTTTAAGAATTAGGGTTCATATAGCAACCATTTTAGGGGAACCAGTGCTGTGAATTTCAATTGTCTTTGCAATTTTTATCTCCTCTTCTTCTTGAACAATTTGAATAGAAATGGCATTCTGGACTTAAAGTGCGTTCGCAGTTAGGAAAACAATTACATTGTTTGTTGGAGAAATGAAATTCTTCTGTTGAAACGTAGTTTAGAGCTACTATAGAAAATTTATGGGTTGATCAACTGCAGTGTGGATGAACAGTTTGGCGAATAGACATTTTGTGAAAACTCTGTTCTTTTTATTTTTGACAAGAAACAAAACTTATCATGAATTAATGAAACAAAGGATCAGAACCCCCAAAATAAATTGAATCTGAAAAGAGAATCCAACGAAAAAAAACTTAGATGTGTTGGATGAACATCGGCTAATTTAGGGAATGATCATGGGTTTGTAATCAAGGAATACTCCATTGGTTTGAGGTCTTTTGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGTTCATCTAACATGGTATCGAGCCATGCCCTAAACTTAGCCATGCCAATAGAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAAAAAAAAAAAAAGAGTNAAAAAAAAAAAAAAAGAGTCGAGACTCCTCGAAGGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAGCCTCAATTAAGGGAAGGTGTACTTTGTTCGAGGGGAGGTGTTGGATGAAAGTCCCACATCGACTAATTTAGGTAATGATCAAGGGTTTATGATCAAGAATACTCTCTCCATTGGTTTGAGGCCTTTTGGGGAAGTCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGAGTCTTGTTCATCTAACAAGATGAACACCAATGGGAAGCATGAAATCTGGAGGACTCAGTGATCAAACCAATGAAGAACCTTTGAAGCCAAACCATATGTAAAACCAATATAAAAAAGCCTCCCTTGCGTTAGAGAAGAGACTGAAAGAAATTCCTCTAATGCAATTGAAAGCTCGTGAAATGGATTTTTAAAAGCAAACAATGGTATGAATATCTATCAAACTGTGAAAAAAGGGCTCCAAAAACACCTTTGCACCAAAAAGACTGCAGCCTTAACCAAAGCTTAAAGCCTCAAACAGGCAACCAAACGAAACTGAAACACTTGAAAGAAGAAACAAAACACCAAAATCCTTAGAGAAACCAACCAGAGCTTGGCAAAAGTGAACACTGACACAACTTTCGTCATGAACCAGTGAAGGAATTCCATGAAACTCGACACCATTGGCTTCACTAAGTGAACCGAAATTGGCTGGCATGGAGGGTGGAGGGTAAGTGAAGGGTCATCAACGGATGAAGAGGCAACTTGCTGATTAGAAGGCACCAAAAGCCTCTTACAACATTCTTTCTTCAATAAAATTTGAATTCAAAGAATTTTCCTCAAGACATGGTTGGTATGACGAATACGCCCCAACTTCACGGATATAAGACGAAGGATAGGCTGGATTAGGACCCTTTTTTACATCTTTAACATTCCGGGACTTCGAAGACTCAAAAGGCATAATTAGCCTTTAGGTCTCATCGTGCTAGATTAAGTCCCTTTTCGATATAGTTTGACTCTTTTTGTTTGGAGTTGGTTTTGCGTATTTTCTTGTATTTTCTAATTTTTTTAATGATAGTCCATTAAAAAAAAAAAGCTAAGGTTAACTGTTTTTTCTGATCGGATCTTGTTTGTGAAGACGAATATGTTGGCATCTCGAATCCTGTTTAGTTTTCTGTATGCGAACTTGACTAATGGCTTCGATTTCTGCATTCCACGTAAATGTCGAATATTAGAAAATCCTTAGACCAAAGTAGAATTAAAAAAATTGAACCATTGGATACACAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGGTAAAGTATATGGATTGACATTCTTGATCTTATCTCAGAATGAATTACTCTTGCTTCTTAAATTCTAATACTCATATTCATGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGAATTCACATCTAACAGGTTTATTTTGAAATTTTATCCATGCAAGTTTTTTGTTACACCGTTCTAAATGTTGCAGTTCCACTAGTTTTTATTTGGTTCATCAATATAGAGGCTTTTGTTCTGCTTTCGTTTCACAGGTTTAGAGTTTAAACAAGATTATAGTGTCTGTGTGAGTTAGTAGTAAGAGCTTAAAATATGCATAACCAAATATAAATCAAAATACATCGAGTTATATAATTATCTCTTGGATATGTATGCACATGCATGTAAACCGAGCTAGGATTGGTACCTATTTATTAAACTTAGAGGGTGTTCATCGTCTAGTTGGGTTGGGTTGGGTTGAAACAATTTTTTGGACCAACCCCAAAAGTTTAGGATGGTTGAATTGGTAACCCAACTTAACCTGAAAACTCCCGTTGGGTCTTGAGTTTTATTTTTTTTAAAGAAGTTTTATTTATCCCAACTCATAATTATTCGATACAATTTTAGATAAAATATATTAAAATTTTACAAATAAACATAAATCAATCTATAATCATTAAAAAAAATAAAAAAAAATAAATTCATCAACAACAGAGAAAATTGTAACCTTTTACACGG

mRNA sequence

AGTTTCAGGCGCCAGGAACAAGGAGGAGCGAAAATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGAATTCACATCTAACAGGTTTATTTTGAAATTTTATCCATGCAAGTTTTTTGTTACACCGTTCTAAATGTTGCAGTTCCACTAGTTTTTATTTGGTTCATCAATATAGAGGCTTTTGTTCTGCTTTCGTTTCACAGGTTTAGAGTTTAAACAAGATTATAGTGTCTGTGTGAGTTAGTAGTAAGAGCTTAAAATATGCATAACCAAATATAAATCAAAATACATCGAGTTATATAATTATCTCTTGGATATGTATGCACATGCATGTAAACCGAGCTAGGATTGGTACCTATTTATTAAACTTAGAGGGTGTTCATCGTCTAGTTGGGTTGGGTTGGGTTGAAACAATTTTTTGGACCAACCCCAAAAGTTTAGGATGGTTGAATTGGTAACCCAACTTAACCTGAAAACTCCCGTTGGGTCTTGAGTTTTATTTTTTTTAAAGAAGTTTTATTTATCCCAACTCATAATTATTCGATACAATTTTAGATAAAATATATTAAAATTTTACAAATAAACATAAATCAATCTATAATCATTAAAAAAAATAAAAAAAAATAAATTCATCAACAACAGAGAAAATTGTAACCTTTTACACGG

Coding sequence (CDS)

ATGGGAGCTTCGATAATGTCTTCTCCCTCTCATTCTCACCTCATCCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTCTCTCGACTTTCCTCTCTAGACCCTCCGCCGCCATCTCAGCCGCTTGCTCCCATCAGTTTAAACCCAATAGTTCTATCTTCCTCATTCGCCAATCTCCTCACCGTTCCCGGTCTTTTAGTCCCTCAGCATCCGTTTCATTCTCTCGCTCCTTTTCTTCCACCATTTCTGATACCTCTGCGGTCGGATTTGAAGACGACGATGTAATTGACGATGACGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACAACACCGTTGAGGACGGGTTGGAAACTGCTGTGGCTTCGGACTCGTCTTCGGCGGTGGTGAGTAGAAGTGAAGTGAAGAATATTCCGAGTTTGACGGTTAAGGAGAAGAAAGAGTTGGCATCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAAGCAATTGGAGGAATCAACAGGGTCTGTGGTAGTGAGCAAAATTGGGAGAACTGTTATCATTTATAGGCCCAGCATCTCTAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAATGTATGTGAGAAAAGAACCCGATCGAGTGAAACTATTTTTGCAGAATAAAGTACAAACACCGAGAAGCTCGAACCGAGGTCGTCGTGGAAGCAGCAGGTTTTGA

Protein sequence

MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPHRSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF
Homology
BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.7e-08
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 153 LTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGEL 212
           LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ VL NC  + 
Sbjct: 2   LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDK 61

Query: 213 EDVVKQLEESTGSVVVSKIGRTVIIYRPSISKMKAE 249
            DV + L + + S +V  IG T+++Y+ S    + E
Sbjct: 62  NDVAEALVKGSRSQLVQTIGNTIVLYKESKENKQIE 94

BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 152 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 211
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 212 LEDVVKQLEESTGSVVVSKIGRTVIIYRPS 242
              +V+ +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 152 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 211
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 212 LEDVVKQLEESTGSVVVSKIGRTVIIYRPS 242
              +V+ +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Cp4.1LG04g01020 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 28/90 (31.11%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 152 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 211
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 212 LEDVVKQLEESTGSVVVSKIGRTVIIYRPS 242
              +V+ +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517 bits (1332), Expect = 5.90e-184
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL
Sbjct: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240

Query: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF
Sbjct: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290

BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 493 bits (1268), Expect = 2.67e-174
Identity = 278/290 (95.86%), Postives = 281/290 (96.90%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFL RPSA ISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSF+PSASVSFSRSFSSTISDTSAVGFEDDDVIDDD+ESDYEDEVEIE      DFEL
Sbjct: 61  RSRSFTPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDEESDYEDEVEIE------DFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSSSAVVS SEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVVSKIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRP 240

Query: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF
Sbjct: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima])

HSP 1 Score: 489 bits (1258), Expect = 8.92e-173
Identity = 276/290 (95.17%), Postives = 280/290 (96.55%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFL RPSA ISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSF+PSASVSFSRSFSS IS TSAVGFEDDDVIDDDDESDYEDEVEIE      DFEL
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGFEDDDVIDDDDESDYEDEVEIE------DFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSSSAVVSRSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVVSKIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRP 240

Query: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           SISKMKAEEEKRRARK+YVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF
Sbjct: 241 SISKMKAEEEKRRARKIYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: KAG7022267.1 (yqeI [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459 bits (1181), Expect = 5.72e-161
Identity = 260/275 (94.55%), Postives = 265/275 (96.36%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFL RPSA ISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSF+PSASVSFSRSFSSTISDTSAVGFEDDDVIDDD+ESDYEDEVEIE      DFEL
Sbjct: 61  RSRSFTPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDEESDYEDEVEIE------DFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSSSAVVS SEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVVSKIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRP 240

Query: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQ 275
           SISKMKAEEEKRRARKMYVRKEPDRVKLFLQ K++
Sbjct: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQVKIK 269

BLAST of Cp4.1LG04g01020 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo])

HSP 1 Score: 367 bits (942), Expect = 1.12e-124
Identity = 215/293 (73.38%), Postives = 245/293 (83.62%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSA--AISAACSHQFKPNSSIFLIRQS 60
           M ASI+SS SHSH  HSLLLRSVPSS STF S+PSA  A S  C HQFKP+SS FL R+S
Sbjct: 1   MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKS 60

Query: 61  PHRSRSFSPSASVSFSRSFSSTISDTSAVGFED-DDVIDDDDESDYEDEVEIEDEVEIED 120
           PH SR F+PS S+SFSR FSST+S  S V F++ DD I+D DESDYEDEVE+ED      
Sbjct: 61  PHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMED------ 120

Query: 121 FELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLV 180
                 +V DG E  VAS+ SS V++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLV
Sbjct: 121 ------SVGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLV 180

Query: 181 GKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVII 240
           GKSGVTPGLATSFIETLEANELLKIK+LGNCP +LEDVV++LEESTGSVVV++IGRTVII
Sbjct: 181 GKSGVTPGLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVII 240

Query: 241 YRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           YRPSI+KMKAEEEKRR+RK+Y+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Sbjct: 241 YRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 280

BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 4.32e-173
Identity = 276/290 (95.17%), Postives = 280/290 (96.55%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFL RPSA ISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSF+PSASVSFSRSFSS IS TSAVGFEDDDVIDDDDESDYEDEVEIE      DFEL
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGFEDDDVIDDDDESDYEDEVEIE------DFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSSSAVVSRSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVVSKIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRP 240

Query: 241 SISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           SISKMKAEEEKRRARK+YVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF
Sbjct: 241 SISKMKAEEEKRRARKIYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1)

HSP 1 Score: 367 bits (942), Expect = 5.41e-125
Identity = 215/293 (73.38%), Postives = 245/293 (83.62%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSA--AISAACSHQFKPNSSIFLIRQS 60
           M ASI+SS SHSH  HSLLLRSVPSS STF S+PSA  A S  C HQFKP+SS FL R+S
Sbjct: 1   MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKS 60

Query: 61  PHRSRSFSPSASVSFSRSFSSTISDTSAVGFED-DDVIDDDDESDYEDEVEIEDEVEIED 120
           PH SR F+PS S+SFSR FSST+S  S V F++ DD I+D DESDYEDEVE+ED      
Sbjct: 61  PHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMED------ 120

Query: 121 FELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLV 180
                 +V DG E  VAS+ SS V++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLV
Sbjct: 121 ------SVGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLV 180

Query: 181 GKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVII 240
           GKSGVTPGLATSFIETLEANELLKIK+LGNCP +LEDVV++LEESTGSVVV++IGRTVII
Sbjct: 181 GKSGVTPGLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVII 240

Query: 241 YRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           YRPSI+KMKAEEEKRR+RK+Y+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Sbjct: 241 YRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 280

BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 3.03e-123
Identity = 215/292 (73.63%), Postives = 243/292 (83.22%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAA--ISAACSHQFKPNSSIFLIRQS 60
           MGASI+SS SHS     LLLRS+PSS STF S+PSAA  IS  C HQFKP+SS  L R+S
Sbjct: 1   MGASIISSHSHS-----LLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTLLTRES 60

Query: 61  PHRSRSFSPSASVSFSRSFSSTISDTSAVGFED-DDVIDDDDESDYEDEVEIEDEVEIED 120
           PH  R F+PSA +SFSRSFSSTISD S V F++ DD I+D DESDYEDEVE+EDEV    
Sbjct: 61  PHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMEDEV---- 120

Query: 121 FELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLV 180
                    DG ET VAS+ SS ++SR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLV
Sbjct: 121 --------GDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLV 180

Query: 181 GKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVII 240
           GKSGVTPGLATSFIETLEANELLKIK+LGNCP ELEDVV++L ESTGSVVV++IGRTVII
Sbjct: 181 GKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVII 240

Query: 241 YRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSR 289
           YRPSI+KMKAEEEKRRARK+Y+RKEPDRVK  LQ K++TP+SSNRGRRG+SR
Sbjct: 241 YRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR 275

BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A6J1EIK7 (uncharacterized protein LOC111434725 OS=Cucurbita moschata OX=3662 GN=LOC111434725 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 5.24e-112
Identity = 192/201 (95.52%), Postives = 193/201 (96.02%), Query Frame = 0

Query: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60
           MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLS+PSAAISAACSHQFKPNSSIFLIRQSPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSKPSAAISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFEL 120
           RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDY DEVEIE      DFEL
Sbjct: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYGDEVEIE------DFEL 120

Query: 121 EDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
           EDNTVEDGLETAVASDSS AVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS
Sbjct: 121 EDNTVEDGLETAVASDSSPAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLK 201
           GVTPGLATSFIETLEANELLK
Sbjct: 181 GVTPGLATSFIETLEANELLK 195

BLAST of Cp4.1LG04g01020 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 2.78e-85
Identity = 136/162 (83.95%), Postives = 154/162 (95.06%), Query Frame = 0

Query: 129 LETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLAT 188
           +ET VAS+ SS V++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLAT
Sbjct: 1   METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLAT 60

Query: 189 SFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRPSISKMKAE 248
           SFIETLEANELLKIK+LGNCP ELEDVV++LEESTGSVVV++IGRTVIIYRPSI+KMKAE
Sbjct: 61  SFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE 120

Query: 249 EEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290
           EEKRR+RK+Y+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Sbjct: 121 EEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 162

BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-34
Identity = 125/305 (40.98%), Postives = 168/305 (55.08%), Query Frame = 0

Query: 7   SSPSHSHLIHSLLLRSVPSSLSTFLSRP---SAAISAACSHQFKPNSSIFLIRQSPHRSR 66
           +S S +HLIH+LL    P S      RP   SA++S + +H+ KP    F  +  P  S 
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQS-NHRNKPRFQSFSSKPLPCHSA 67

Query: 67  SFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYED----EVEIEDEVEIEDFE 126
           S          +SFSS           D+  +++D+ES+ ED    E E EDE E ++ +
Sbjct: 68  SL-------VVKSFSSI----------DEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQD 127

Query: 127 LEDNTVEDGLETAVASDSSSAVVSRSEVK----------NIPSLTVKEKKELASYAHSLG 186
                 E G+E + AS+  S +  + E            +   L++KEKKELASYAHSLG
Sbjct: 128 SGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLG 187

Query: 187 KKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVS 246
            KLK QLVGKSGVT  +  SF+ETLE NELLK+K+    P ELED V+ LEE+TGSV V 
Sbjct: 188 DKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVG 247

Query: 247 KIGRTVIIYRPSISKMKAEEEKRRARKMYVRKEPD-----RVKLFLQNKVQTPRSSNRGR 290
           +IGRTVI+YRPS +KMKAE +K+   +M + +          K F   +  + R   RGR
Sbjct: 248 QIGRTVILYRPSPTKMKAEAKKKEVERMSITRRQKYANTRPTKPF--RREYSERPDGRGR 292

BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 115/272 (42.28%), Postives = 156/272 (57.35%), Query Frame = 0

Query: 7   SSPSHSHLIHSLLLRSVPSSLSTFLSRP---SAAISAACSHQFKPNSSIFLIRQSPHRSR 66
           +S S +HLIH+LL    P S      RP   SA++S + +H+ KP    F  +  P  S 
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQS-NHRNKPRFQSFSSKPLPCHSA 67

Query: 67  SFSPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYED----EVEIEDEVEIEDFE 126
           S          +SFSS           D+  +++D+ES+ ED    E E EDE E ++ +
Sbjct: 68  SL-------VVKSFSSI----------DEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQD 127

Query: 127 LEDNTVEDGLETAVASDSSSAVVSRSEVK----------NIPSLTVKEKKELASYAHSLG 186
                 E G+E + AS+  S +  + E            +   L++KEKKELASYAHSLG
Sbjct: 128 SGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLG 187

Query: 187 KKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVS 246
            KLK QLVGKSGVT  +  SF+ETLE NELLK+K+    P ELED V+ LEE+TGSV V 
Sbjct: 188 DKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVG 247

Query: 247 KIGRTVIIYRPSISKMKAEEEKRRARKMYVRK 262
           +IGRTVI+YRPS +KMKAE +K+   +M + +
Sbjct: 248 QIGRTVILYRPSPTKMKAEAKKKEVERMSITR 261

BLAST of Cp4.1LG04g01020 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29
Identity = 106/248 (42.74%), Postives = 141/248 (56.85%), Query Frame = 0

Query: 8   SPSHSHLIHSLLLRSVPSSLSTFLSRPSAA--ISAACSHQFKPNSSIFLIRQSPHRSRSF 67
           S + ++LIH LL    P+S      RP +   +    SH    +SS+ L    P    SF
Sbjct: 6   SSTLTNLIHHLLRHRKPTSPVCLFLRPFSVSLLGRKSSHHAWISSSLPL----PRPYISF 65

Query: 68  SPSASVSFSRSFSSTISDTSAVGFEDDDVIDDDDESDYEDEVEIEDEVEIEDFELEDNTV 127
           SP   +   +SFSS                 D+ E D ED V +   +     E+ D+  
Sbjct: 66  SP---LLVPKSFSSV----------------DESEQD-EDNVSLVASLN----EINDDGQ 125

Query: 128 EDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 187
           EDG E  + S   +   S  E      L+ KEK++LASYAH LG KLKSQLVGKSGVT  
Sbjct: 126 EDGSELTMVSMRENRRSSALE------LSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDS 185

Query: 188 LATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYRPSISKM 247
           +  SF+ETLE NELLK+K+   CPGELED++ +LEE+TGSV V +I RTVI+YRPS +K+
Sbjct: 186 VVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVSVGQIARTVILYRPSPTKL 219

Query: 248 KAEEEKRR 254
           KA+E+K+R
Sbjct: 246 KADEDKKR 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P544543.7e-0837.50Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN... [more]
P0AGK63.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1[more]
P0AGK53.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 ... [more]
P0AGK43.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 ... [more]
Match NameE-valueIdentityDescription
XP_023529380.15.90e-184100.00uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo][more]
KAG6588422.12.67e-17495.86hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022971306.18.92e-17395.17uncharacterized protein LOC111470060 [Cucurbita maxima][more]
KAG7022267.15.72e-16194.55yqeI [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_008448058.11.12e-12473.38PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1I2Z34.32e-17395.17uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060... [more]
A0A1S3BJF75.41e-12573.38uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=... [more]
A0A0A0K2C33.03e-12373.63CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV... [more]
A0A6J1EIK75.24e-11295.52uncharacterized protein LOC111434725 OS=Cucurbita moschata OX=3662 GN=LOC1114347... [more]
A0A5D3DFJ12.78e-8583.95Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1... [more]
Match NameE-valueIdentityDescription
AT4G39040.11.8e-3440.98RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT4G39040.21.2e-3342.28RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT2G21350.11.8e-2942.74RNA-binding CRS1 / YhbY (CRM) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 153..239
e-value: 2.2E-23
score: 93.7
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 153..239
e-value: 6.4E-16
score: 58.3
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 151..250
score: 17.049477
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 152..250
e-value: 1.2E-27
score: 97.8
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 153..241
NoneNo IPR availablePANTHERPTHR47714CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 7..290
NoneNo IPR availablePANTHERPTHR47714:SF1CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 7..290

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g01020.1Cp4.1LG04g01020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding