Cp4.1LG04g00980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

BLAST of Cp4.1LG04g00980 vs. NCBI nr
Match: XP_023531748.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171 bits (433), Expect = 2.08e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60
          MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          HSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91

BLAST of Cp4.1LG04g00980 vs. NCBI nr
Match: KAG7022286.1 (hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (403), Expect = 6.95e-49
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60
          MASVCRSVLTATGSR MAGRTRTLLRKTLNPMP+SSSSKGLTSVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRPMAGRTRTLLRKTLNPMPESSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEGF 87
          HSAVASARLKSKIAVDSHCWSWLSEGF
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEGF 87

BLAST of Cp4.1LG04g00980 vs. NCBI nr
Match: XP_022933658.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 159 bits (403), Expect = 7.85e-49
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60
          MASVCRSVLTATG+R + GRTRTL+RKTLNPMP SSSS+GLTSVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGARFVTGRTRTLVRKTLNPMPGSSSSRGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          HSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91

BLAST of Cp4.1LG04g00980 vs. NCBI nr
Match: KAG6588438.1 (hypothetical protein SDJN03_17003, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155 bits (391), Expect = 7.66e-47
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60
          MASVCRSVLTATGSR MAGRTRTLLRKTLNPMP+SSSSKGLTSVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRPMAGRTRTLLRKTLNPMPESSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSE 85
          HSAVASARLKSKIAVDSHCWSWLSE
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSE 85

BLAST of Cp4.1LG04g00980 vs. NCBI nr
Match: XP_022136047.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 149 bits (376), Expect = 1.06e-44
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMP-DSSSSKGLTSVSRIVSSLATVESLMP 60
          MA+VCRS+LTA GSRS+AGRTRTL  KTLNPMP  SSSS+G+ SVSRIVSSLATVESLMP
Sbjct: 1  MAAVCRSLLTAAGSRSIAGRTRTLTPKTLNPMPVSSSSSRGVPSVSRIVSSLATVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          LHSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 LHSAVASARLKSKIAVDSHCWSWLSEGFATPL 92

BLAST of Cp4.1LG04g00980 vs. ExPASy TrEMBL
Match: A0A6J1F5F6 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441012 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 3.80e-49
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60
          MASVCRSVLTATG+R + GRTRTL+RKTLNPMP SSSS+GLTSVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGARFVTGRTRTLVRKTLNPMPGSSSSRGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          HSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEGFATPL 91

BLAST of Cp4.1LG04g00980 vs. ExPASy TrEMBL
Match: A0A6J1C4G8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007834 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 5.14e-45
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMP-DSSSSKGLTSVSRIVSSLATVESLMP 60
          MA+VCRS+LTA GSRS+AGRTRTL  KTLNPMP  SSSS+G+ SVSRIVSSLATVESLMP
Sbjct: 1  MAAVCRSLLTAAGSRSIAGRTRTLTPKTLNPMPVSSSSSRGVPSVSRIVSSLATVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          LHSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 LHSAVASARLKSKIAVDSHCWSWLSEGFATPL 92

BLAST of Cp4.1LG04g00980 vs. ExPASy TrEMBL
Match: A0A6J1GKU0 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454867 PE=4 SV=1)

HSP 1 Score: 137 bits (345), Expect = 2.92e-40
Identity = 75/94 (79.79%), Postives = 81/94 (86.17%), Query Frame = 0

Query: 1  MASVCRSVLTAT---GSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESL 60
          MAS+CRS+L A    GSRSMAGRTRTL   TL P+P SSSS+G  SVSRI SSLA+V+SL
Sbjct: 1  MASICRSLLAAAAAGGSRSMAGRTRTLAHVTLKPVPVSSSSRGFISVSRIASSLASVDSL 60

Query: 61 MPLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          MPLHSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 MPLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 94

BLAST of Cp4.1LG04g00980 vs. ExPASy TrEMBL
Match: A0A6J1I675 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471072 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 8.11e-40
Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 0

Query: 1  MASVCRSVLTAT--GSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLM 60
          MASVCRS+L A   GSRSMAGRTRTL   TL P+P SSSS+G  SVSRI  SLA+V+SLM
Sbjct: 1  MASVCRSLLAAAAGGSRSMAGRTRTLAHVTLKPVPVSSSSRGFISVSRIAPSLASVDSLM 60

Query: 61 PLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          PLHSAVASARLKSKIAVDSHCWSWLSEGFATPL
Sbjct: 61 PLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 93

BLAST of Cp4.1LG04g00980 vs. ExPASy TrEMBL
Match: A0A0A0K7P3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268490 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 1.25e-36
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMP-DSSSSKGLTSVSRIVSSLATVESLMP 60
          MASV RS+LTA  SRSM GRT++L  KTLNP+P  SSSS+   S +RIVSSLA VESLMP
Sbjct: 1  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEGFATPL 91
          LH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Sbjct: 61 LHTAVASARLKSKIAVDSHCWSWLSEGFATSL 92

BLAST of Cp4.1LG04g00980 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-19
Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSS------SKGLTSVSRIVSSLATV 60
          MAS CRS L A GSR++  R+RT+ +K+LN  P ++S      S+ +   SR++S+L +V
Sbjct: 1  MASFCRSALMA-GSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSV 60

Query: 61 ESLMPLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 92
          E+++PLHSAVASARL+S IA DS CWS LS+G ATPL
Sbjct: 61 ETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL 96

BLAST of Cp4.1LG04g00980 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16
Identity = 48/96 (50.00%), Postives = 67/96 (69.79%), Query Frame = 0

Query: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSS------SKGLTSVSRIVSSLATV 60
          MAS CRS L A GSR++  R+RT+ +K+LN  P ++S      S+ +   SR++S+L +V
Sbjct: 1  MASFCRSALMA-GSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSV 60

Query: 61 ESLMPLHSAVASARLKSKIAVDSHCWSWLSEGFATP 91
          E+++PLHSAVASARL+S IA DS CWS LS+    P
Sbjct: 61 ETMIPLHSAVASARLRSSIAADSSCWSLLSQELGVP 95

BLAST of Cp4.1LG04g00980 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04
Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 33 PDSSSSKGLTSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 92
          P S++S  L   SR+   L+   S++PLHSA+AS+RL S ++V+S  W  + +G + PL
Sbjct: 40 PSSATSCRLNRSSRLPVELS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLPL 95

BLAST of Cp4.1LG04g00980 vs. TAIR 10
Match: AT1G70350.1 (unknown protein; Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 34  DSSSSKGLTSVSRIVSSLATVE-----SLMPLHSAVASARLKSKIAVDSHCWSWLSEGFA 92
           + SSS    S+ R+  S   VE     SL+PLHS  ASA L S +++ +  WS LSEGFA
Sbjct: 43  NGSSSSTRPSLRRLTFSRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSEGFA 102

BLAST of Cp4.1LG04g00980 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.1e-04
Identity = 27/93 (29.03%), Postives = 47/93 (50.54%), Query Frame = 0

Query: 2  ASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVS---RIVSSLATVESLM 61
          + +CR             +T   +    +P+  SS S   + ++   R+   L+   S++
Sbjct: 5  SKICRLSSKIHSLTQKLSKTNVHISSLPSPIKSSSPSSATSRINQSFRLPVELSCCLSML 64

Query: 62 PLHSAVASARLKSKIAVDSHCWSWLSEGFATPL 92
          PLHSA+ASARL S ++V+S  W  + +G + PL
Sbjct: 65 PLHSAIASARLISSLSVESKSWGLVPQGISMPL 97