Cp4.1LG04g00630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g00630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	root phototropism protein 3-like isoform X1
Location	Cp4.1LG04: 1422317 .. 1429109 (+)
RNA-Seq Expression	Cp4.1LG04g00630
Synteny	Cp4.1LG04g00630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATTGTAAGTCGAAATCGAAGACATATATATACACTCTCAGCTATTCCTTTCCTTCCTTTTTAAAGGTCAGTTTTTTAACCCTAAAAAAATGAAAATTTAATCTTTTGGAATTAAGACCTTCAGAATCTCTCTGATTTTCTCTTCCGCAACCCCCAGAGAGGAGAAAAAAGGGAAGAAAAAAAAATGAAAAAAAAAAAAATGAAAAAAAAAGAAAAGGATTTCATCCAATTTGGAGATCTCCATTGCACTGTACGGAGAATTTCCAAACCCCAACAAACAGAACAAAAAGTCTCAAATATAACATCATGGGTCATCCTCCGTTCTTCGCCGTAGATCTCTTTCTCAAGCTTTTTCTCATCGATTTTCCTTTTTCGCTTTCAGGGTCTTCAAGATCTTGCTCAATTGGGGTCTCTCAAAAAGGTAATTCTACTCTCCTCTCTCTCTCTCTCCCTCTGCTTGATCCTTTTTGTCTGTAAATTTTATGATTTCCTTTCTGGGTTTGTTGTGGAAATCATTAATTGTTCTTGAAATAGCTTTTTGGGTTCTGTGATTGACGGATGTTGATGATCTTTTGATATGAAAATAGCTGAAATCAATGTGAAGGAAGATTGGTTCTCTCTCGACTGCTTGCTAGGTTTTCTTTTTCGCCCTTTTTGAATTCGTAAGTTTTTGGTATGAACATGAATGAGTCGTATGTTGGATTAGGATAAGATCAATATATCAATTTCCTCATTTAATTTTGTGTGATCTCTACCTGTTTGATGAATTGCATCTGAGTGAAATCAACAGTAAAGCCAGGGGAGTTTCTTGTAGCTTGTTGGTTGTTTGTAGGATTTGTTTTCGCCGCGTGTTTAATCATGATCGACATGGAATTGGGGCTTGGTTGTGATGTTTTTCGTGTCATTTAAGGATTGATGTAGCTGTTTTGCTTAGCCTGTACAATGAAATATAGGTTAGGAAGCATGTAGATATAGATTTTTGCACATTTGGACCTTGAACCAGTTCGAAATTTATCATTGACATGTTTGGAAATTACTCGAACCAGTACGAAGATGTAAGATCTATAATAAAGAAAGAAGGTGAGGAGTGCAATATCTTAGCATAATACTGACTGGTAGTCGACTTGTTCAAGTTCTGTGCTGTGAATTTTCTTCATGGAAAAGCCTTATTGATATATTTTGGTATTCTTCTTCCTCCTGAGATCTATTGATTTCAGAGAAATTTTACTTTAATCAATGATCACTCTCGAAATGTGCATTGATTTTACTTCGAGCGATTCAGTTTTTGGTAAGTAAGGTCCAGTCGTTCTGATGGGTTGAATCGTTGATATTGAAGTGAAAGGTTCATATATCATGGTCTCTGTCTTGTAAACGTTCTCTGTGGTAGATTCCTATTACTTTTCGTAGAATTTTGACAACTTTCGGGTTTCTTCCCGGTTAGAAAAAGTTGTTCCTTTTCCTCCCTCCTGAGATCTATCTGTGTAGTGTTTATATTTTGATTATTCCCTTTTTTGTTCTTTTCAGAAGTTGTCAAGTTTATTTAGACCTTGATGGATCAGCAAGGGCATGGCCAGCCTCAATCCATGGGAGCGGTTGGCAGTGGTGGTCAGATAGCATATGGCAGTAACTTGTACCATCCCGGCCAAATAACTGTAGGCTCGACTTCTGGATCTGTTGTTACATCGGTTGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCGCAGCTTGGTCAACATCAACTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTCTGGGCTAATCAGTACCAAGAGATTGAGAAGGTAACGGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTTGAATTGACTTTACGCTCTTGGAATCATACTGAAGAGAACAAGCGCAGAACGCTTCAAAAGAATGATATTGCTGCAGCTATCACCAGAACTGACATTTTCGATTTTCTGGTTGATATCGTGCCTAGGGAGGATCTGAAAGACGAAGTACTCACCTCAATTCCAAGAGGATCGATAACAGTTGGAGGACCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTCGGAGCACCCGGAATGATTATGGGCAAGCCTGTGATGGACCCGGCTATATATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAACACACACAAGATCAAGCCCCTCCTGATCAATAGTAGCTTGCCACACATAAACGAAGGAGAACCGTATGTTTCACTTTGTTCTCTCCGTGTGATCTCTTTTTATTCAAATCGAAAAGTTAGTTCTGTGGTGGTATATATATAATGTTTCATATGGTCTATACTATCTTCGAGAAGATTTCTTGTTTTCGAGTTTGTGCATATTTCAAATTTCGTTTCGTTCTGTAATGTTGCATGTTTTTGTTGAAAAACATTGCCTTTCAAGTGCATTTGAAGTATATATTATCATCAATCATACATGCAGCTTACACTTTCCATTTGAGTTGGAACTTTAATAAACTCTAATTTTTTTGTTTCAACTTCCATTCCATTGAATATTTTGAAGGGGCGTTTCGATAATACGTCAAGTTCGTATAGCCAAAACCGAGTTTATGTTTGGCAGTATATTTCGTCTGTACGGACTGTAGTTGAGAAGTCGTGTTTGTAGTTGGTATATGTGTTTGCATATCCTAGACTATGAATCTCAAAAATCCTTTCTTAGGCTACAAGCTACCTTTTACGATCACAAACCCACGAATCAAGTACAAACTGAAAATTTTCGAACGTAGATCATCCCGACTTAGAGCTTCTCGACTCTAGGCTACACAAATTCAATCGTTTCAAACTCATGAACCAAACACCTTCATAGTTAGATTTAAGATTTTTGTTTGGCCTATACTCACACCATTTCCTTTCACTTGTTGCAGACGGAGTCTCCTTCGAGCAAGCTCATGTCGATGCCAAACCACACACACACACAACAGTCTGATCGGAGAATTTACACCGAAGATTTGATCTGAAGCCCTTCATAATACTTCCTGTAGATATTTTGCTTGACAAGAGTAGATATCTTGATTGAGCTATAAAAAGTTTCTCCTCTTTCTCTGTTTATGCTTTACTATTCTCTGCATTGTTGGTAATGACAGTAAAAAATGTGTAACTTTATATCATACCTGAAAATATTTGATGCTTTTCTTCACATTCCCATATAAAGAAACTGTAGTTTCCTTATTCTGTTTAGTTGAACTTAATGTTATAAAACAACTTATCTATCTATCTGTCTTTAGTAACTCGCCCAACCATAGCTGCACAAAGTAGCGTTTGAAGTTCTTCAAAATTTCGTGTAAATATTCCATGGCGACATCTTCGGTTGATGAGAACCCAAAGACAATCGAATCAAAATTTGAAATCTCTTTGTTATATTCATAATAATCATCTCATATCAGGAACAATTTAAGTGCAGATGATTTCTAAGATTGAACTTTCTTTTTGGCTTTCTGCTCTGTTTTTGGGACAAAGTTAAAAGAATGTTAGAACAAACAGCTACTATTATATAAAGCCGAGCAAGCCATGGAAGCTTTGGTTTTGCGAGCGAGCTCGGAAAGTGGAGAGCTCATAGAAAGGTAACTAGGATATGGGGCCTAGAACATTGTAGGGTCTTTCTAAACATCTTAAACTCTTTCGTAGCGTTTCTTTTATCGGTCGTAGTTTTTCATTCGGTTGCACGTATCATTCTGTTGCACTTTTTGATATCATGTTATTATTTTTGTCCGGAATGCAGCTAAAAGTCTATTTGGAAATGAGGAAAATCGTGAGCTTAGAAGACAATATCTCAACTTGTAAGGCACTTTATTACTTTTTTCTTTATATGATAGCAAAAGACTTTTAAACGTATATTCATTCCTCTTAAAATATAAACATAGATTCGTTTCTTTAATTGTTGCCGAACATTATAGACCATACATTTTTTAGAAAACTTTTCGACAAAACAAATTTTCCACAACTTAGAACGTGTCACAGTATCGACCACATGCACTATTTGAAACATTCATGGCTGAGGATTAAACACTCAGTTTCATGATAATACAACTAATGCTATGAGGATTGGTTGTGATTATGGCTACATTGTAGCAGACACTGAAAGAGAAGGGTGAGGTCATCAACTTCTTGGTTGTGGATAAGAATGAAAAACAAATGAGTGCTGATTGTTGTTCCTAATTTTGTCTTATGGACATTTTCTGACAATGACATCCGACAGGAGAAGCCAACTAACTCCATTAATGTGTAATTACTTCATTAGCTAACAGACATTCCTTTTGTCTAGAACTCTATAATGAAGCATTTAATGTTTTTTTTCACTTTTTGGATGAAGAATGACCTTTTTGGTTATGAAAAGTCCTATTTAAGGAGATGTGTACTATTCATCTGACCATAGCAGAAACAAAAAAACACAAAAAGTGAAAACAGAACACTTTCTGCTGTTCTTCTGAAACTTTAAGGAAAAACTAGAGTACAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTAAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAATGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGACAGAAGTAACAAGAACTGGTAAACTCCTGATACACTAACATATACCTCTCCTCTCTTTGAGCACTTCTTAACTTAAAATCTTCTCAATGAAGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGATTTCAGCTTTCACTTGCACAAGGTATCAGTTTTAGCTATTTCAATACAAATCTTTAAGAGATGCAGCCTTATTGAGTTCATTGATTCGAGTTCGATTCATGTTCTTCATTAATCCCTGTTTTTCAAGTATTGTTATCCTATGTCGTCTATTTTCGATTTGAAACGTGGATGGTTTATCTTATATAAAATTTGAAATTCTTGAGTTGGATTGTGATGGATGTTTTCAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTAGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTACACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAACGTTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTCGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATTGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCCGAGGTTATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCACCAAGTTGAGATCAGTTACGGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACTATACTAGAAAGTAGATTGGCCATGATGTTGGAAAAATGTGACACTTCGGATTTACTTGTCAAGAACTACGGAGAAGACGATAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCAGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCGGATTGTTTCCAAGTCCTTGTCGAGGCATTGCCGCAAAACGCTCGGGTTTGTTTCGACAATATGTATCGAGCAATTGATATGTACCTGAAGGTAAGGAACTTTCATTTATATCTCATTTGGGAAATGCAAAGTTTCAACTTGAATGATGAAAGAAGTCTTGGTTTTGCAGGCACATCCTGAGTTAACAGAAGAAGAAAGGACATGTCTATGTAGCTCATTGAAATACCATAAACTATCACAAGCAGCAAGGGAACACATAATGAGAAACGATCGGTTACCATTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGACCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAGGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGGTCGAGTTGGATGATGAGTTCACAAAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATGCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCTAGTGTGCGGAAAATTGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTCTCAACTTGA

mRNA sequence

ATGACAATTGGTCTTCAAGATCTTGCTCAATTGGGGTCTCTCAAAAAGACCTTGATGGATCAGCAAGGGCATGGCCAGCCTCAATCCATGGGAGCGGTTGGCAGTGGTGGTCAGATAGCATATGGCAGTAACTTGTACCATCCCGGCCAAATAACTGTAGGCTCGACTTCTGGATCTGTTGTTACATCGGTTGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCGCAGCTTGGTCAACATCAACTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTCTGGGCTAATCAGTACCAAGAGATTGAGAAGGTAACGGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTTGAATTGACTTTACGCTCTTGGAATCATACTGAAGAGAACAAGCGCAGAACGCTTCAAAAGAATGATATTGCTGCAGCTATCACCAGAACTGACATTTTCGATTTTCTGGTTGATATCGTGCCTAGGGAGGATCTGAAAGACGAAGTACTCACCTCAATTCCAAGAGGATCGATAACAGTTGGAGGACCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTCGGAGCACCCGGAATGATTATGGGCAAGCCTGTGATGGACCCGGCTATATATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAACACACACAAGATCAAGCCCCTCCTGATCAATACAAAAGACTTTTAAACGAAAAACTAGAGTACAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTAAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAATGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGACAGAAGTAACAAGAACTGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGATTTCAGCTTTCACTTGCACAAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTAGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTACACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAACGTTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTCGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATTGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCCGAGGTTATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCACCAAGTTGAGATCAGTTACGGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACTATACTAGAAAGTAGATTGGCCATGATGTTGGAAAAATGTGACACTTCGGATTTACTTGTCAAGAACTACGGAGAAGACGATAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCAGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCGGATTGTTTCCAAGTCCTTGTCGAGGCATTGCCGCAAAACGCTCGGGTTTGTTTCGACAATATGTATCGAGCAATTGATATGTACCTGAAGGCACATCCTGAGTTAACAGAAGAAGAAAGGACATGTCTATGTAGCTCATTGAAATACCATAAACTATCACAAGCAGCAAGGGAACACATAATGAGAAACGATCGGTTACCATTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGACCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAGGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGGTCGAGTTGGATGATGAGTTCACAAAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATGCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCTAGTGTGCGGAAAATTGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTCTCAACTTGA

Coding sequence (CDS)

ATGACAATTGGTCTTCAAGATCTTGCTCAATTGGGGTCTCTCAAAAAGACCTTGATGGATCAGCAAGGGCATGGCCAGCCTCAATCCATGGGAGCGGTTGGCAGTGGTGGTCAGATAGCATATGGCAGTAACTTGTACCATCCCGGCCAAATAACTGTAGGCTCGACTTCTGGATCTGTTGTTACATCGGTTGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCGCAGCTTGGTCAACATCAACTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTCTGGGCTAATCAGTACCAAGAGATTGAGAAGGTAACGGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTTGAATTGACTTTACGCTCTTGGAATCATACTGAAGAGAACAAGCGCAGAACGCTTCAAAAGAATGATATTGCTGCAGCTATCACCAGAACTGACATTTTCGATTTTCTGGTTGATATCGTGCCTAGGGAGGATCTGAAAGACGAAGTACTCACCTCAATTCCAAGAGGATCGATAACAGTTGGAGGACCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTCGGAGCACCCGGAATGATTATGGGCAAGCCTGTGATGGACCCGGCTATATATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAACACACACAAGATCAAGCCCCTCCTGATCAATACAAAAGACTTTTAAACGAAAAACTAGAGTACAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTAAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAATGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGACAGAAGTAACAAGAACTGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGATTTCAGCTTTCACTTGCACAAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTAGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTACACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAACGTTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTCGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATTGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCCGAGGTTATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCACCAAGTTGAGATCAGTTACGGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACTATACTAGAAAGTAGATTGGCCATGATGTTGGAAAAATGTGACACTTCGGATTTACTTGTCAAGAACTACGGAGAAGACGATAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCAGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCGGATTGTTTCCAAGTCCTTGTCGAGGCATTGCCGCAAAACGCTCGGGTTTGTTTCGACAATATGTATCGAGCAATTGATATGTACCTGAAGGCACATCCTGAGTTAACAGAAGAAGAAAGGACATGTCTATGTAGCTCATTGAAATACCATAAACTATCACAAGCAGCAAGGGAACACATAATGAGAAACGATCGGTTACCATTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGACCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAGGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGGTCGAGTTGGATGATGAGTTCACAAAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATGCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCTAGTGTGCGGAAAATTGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTCTCAACTTGA

Protein sequence

MTIGLQDLAQLGSLKKTLMDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQLGQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQSHPYMPPQMWQHTQDQAPPDQYKRLLNEKLEYRIATIVPVEMTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLIRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST

Homology

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot
Match: Q9FMF5 (Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-88
Identity = 227/671 (33.83%), Postives = 337/671 (50.22%), Query Frame = 0


Query: 336 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKN 395
           +  +   ++W V T     SDL+V++GD +FHLHK P+++RS  +NR+I ++      ++
Sbjct: 37  DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96

Query: 396 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTS 455
              + + LD+LPGG  AFEL  KFCYG  VDLTA N++ L CAA +LEMT+DL +GNL  
Sbjct: 97  PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156

Query: 456 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEA------ 515
           K EAF+S+V+ SSW D+  VLKSCE +S  A  L I +RCSE+IA KAC NP+       
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216

Query: 516 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 575
                                     +C+   N ++   + V  +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276

Query: 576 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 635
            VI + K +GMR E++G+ I H+  +W                SSA+             
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336

Query: 636 ----------------------------NGLENST-----LQHLTKLRSVTVESLIRILP 695
                                       NG ++S      L    K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396

Query: 696 FEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNY-GEDDSVY 755
            +++SVT SFLL +L+  +++K+   L+T LE R+ M  E+    DLL+  Y  + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456

Query: 756 DVAIVTRVVKSYAAHI---------------------------------SDNSQSNLLVV 815
           DV +V R+++ +                                       N+Q+  + V
Sbjct: 457 DVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRV 516

Query: 816 GRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERT 855
            RLVD YL  VARD+NL    FQVL EALP++AR C D +YRAID YLKAHP L+E ER 
Sbjct: 517 ARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERK 576

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot
Match: Q5KS50 (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CPT1 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.5e-84
Identity = 213/653 (32.62%), Postives = 326/653 (49.92%), Query Frame = 0


Query: 340 RSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSS---HEVQKNN 399
           R +++W V +     SDL+V+VGD +F+LHK PM++RS  ++R + ++S+    E     
Sbjct: 38  RRDRSWYVNSD--IPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAA 97

Query: 400 SVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSK 459
           +V+ +E+ +LPGGA +FEL  +F YG  VDLTA N++ L CAA +LEMT+++ +GNL  K
Sbjct: 98  AVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFK 157

Query: 460 AEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEAF------ 519
            EAF+S+V+ SSW D+  VLKSCE++S  A  L I +RCSE+IA KAC NP         
Sbjct: 158 TEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTG 217

Query: 520 ------------------------CNNDYNVDN-----------VKLEVVADNWWFADVS 579
                                    +  +NV              +  V   +WWF DVS
Sbjct: 218 AGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVS 277

Query: 580 VLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRW------------------------- 639
           VLRIDHF+ V+ + K +GMR ++IG+ I H+  +W                         
Sbjct: 278 VLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAG 337

Query: 640 ----------FSSAMNGLEN--STLQHLTKLRSVTVESLIRILPFEENSVTSSFLLHILK 699
                      S A  G ++  +     ++ + + VES+I I P + +SV+  FLL +L+
Sbjct: 338 VGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLR 397

Query: 700 LGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYG--EDDSVYDVAIVTRVVKSY--- 759
           L  +++    L+T LE R+ M LE+   +DLL+ +YG    D+ YDV +V R+V+ +   
Sbjct: 398 LAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVEHFLVQ 457

Query: 760 -------------------------------------AAHISDNSQSNLLVVGRLVDDYL 819
                                                +A  S    +    V RL+D YL
Sbjct: 458 EQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDSYL 517

Query: 820 MLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKY 854
             V+RD+NL    FQVL E+LP++AR C D +YRA+D YLKAHP LTE ER  LC  +  
Sbjct: 518 SEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDC 577

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot
Match: Q9LFU0 (BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.6e-73
Identity = 187/584 (32.02%), Postives = 305/584 (52.23%), Query Frame = 0


Query: 322 NKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLN 381
           NK +IFP +   +A S ++ +++W V  K    +DL ++V D +F  HK P++++  Y++
Sbjct: 21  NKSIIFPSRVVTLANSFEKKDRSWYV--KSQIPTDLSIQVNDITFKAHKFPLISKCGYIS 80

Query: 382 RMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHF 441
            + ++ S+ E     +   ++L+N PGGA  FE ++KFCY   +DL   NVAPL CA+ +
Sbjct: 81  SIELKPSTSE-----NGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEY 140

Query: 442 LEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIAL 501
           L MT++   GNL SK EAF++FV+ +SW DT  VL+SC ++S  A  L I +RC + +A 
Sbjct: 141 LYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDLLAW 200

Query: 502 KACMNPEAFCNNDYNVDNVKLEVVADN--WWFADVSVLRIDHFIEVIESGKRRGMRSEVI 561
           KAC           N +N+  +VV  N    + D++ L IDHF+ VI + K R  + ++ 
Sbjct: 201 KAC-----------NDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQIT 260

Query: 562 GSCIAHWT-------------MRWFSSAMNGLENST----LQHLTKL----RSVTVESLI 621
           G  I  +              ++ +    N L+ S     ++    L       T+ESL+
Sbjct: 261 GKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLV 320

Query: 622 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 681
            +LP +  +V+  FLL +LK   V      L++ LE R+ M LE  +  DLL+ N+  ++
Sbjct: 321 SVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEE 380

Query: 682 SVYDVAIVTRVVKSYAAHISDNSQSNLL---VVGRLVDDYLMLVARDQNLRADCFQVLVE 741
               V    R+ + +  H     Q  +L    + +L+D+YL  +A+D  L    FQVL E
Sbjct: 381 QQERV----RIFEFFLMH----EQQQVLGKPSISKLLDNYLAEIAKDPYLPITKFQVLAE 440

Query: 742 ALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPL 801
            LP+NA  C D +YRAIDM+LK HP L++ +R  LC ++   KLS  A  H  +NDRLPL
Sbjct: 441 MLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPL 500

Query: 802 K----YTTSFILLEQVMTR-------PRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKE 861
           +      T  +  EQV  R       P  E   S G+   R+    SR  +  + + ++E
Sbjct: 501 RTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRM----SR-DNEIIKTLKEE 560

Query: 862 ISMMKREVETMKGQLNDMQMCKTKLEGQVKKGFNYKKNFASVRK 869
           +  +K+++  ++   N++Q    +L  + K   N+   +  V+K
Sbjct: 561 LENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKK 573

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.0e-69
Identity = 164/263 (62.36%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 19  MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 78
           MDQQ HGQ          G + YG+N Y    +     S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTNPM-----STTAATVAGG---AAQPG---- 60

Query: 79  GQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 138
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 139 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 198
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 199 PREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQ 258
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P       A  
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNPG-----GAYP 229

Query: 259 SHPYMPPQMWQHTQDQAP--PDQ 279
            +PYM   MW   Q QAP  PDQ
Sbjct: 241 PNPYMGQPMW---QQQAPDQPDQ 229

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot
Match: Q9C9Z0 (Putative BTB/POZ domain-containing protein At3g08660 OS=Arabidopsis thaliana OX=3702 GN=At3g08660 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 8.9e-69
Identity = 176/513 (34.31%), Postives = 276/513 (53.80%), Query Frame = 0


Query: 356 DLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFEL 415
           D+IV V   SF LHK P+VARS  + +M+           +S S IEL + PGG   FEL
Sbjct: 37  DIIVVVDGESFLLHKFPLVARSGKMRKMV-------RDLKDSSSMIELRDFPGGPSTFEL 96

Query: 416 VMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKV 475
            MKFCYG   D+TA NV  L CAA +LEMT+D  + NL  +AE ++  ++  S++++  V
Sbjct: 97  TMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRAENYLDQIVFRSFHESVLV 156

Query: 476 LKSCESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS 535
           L SCE+    A    IP RC EAIA+ AC        ++       LE+     W  ++S
Sbjct: 157 LCSCET-QEIAETYEIPDRCVEAIAMNACRKQLVSGLSEELKGRDCLEM-----WTEELS 216

Query: 536 VLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVE 595
            L ID++++V+ +  R  +RSE I + + H+      +++ G+ +   Q   K+    VE
Sbjct: 217 ALGIDYYVQVVSAMARLSVRSESIVASLVHYA----KTSLKGIIDRNCQEQRKI----VE 276

Query: 596 SLIRILPFEENS------VTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDL 655
           +++ +LP +E        +   FL  +LK+G+++ I+      LE R+   LE     DL
Sbjct: 277 AMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTIIDIEISCRLELERRIGHQLETASLDDL 336

Query: 656 LVKNYGEDDSVYDVAIVTRVVKSYAAHI------------SDNSQSNLLVVGRLVDDYLM 715
           L+ +   +DS+YDV  V R++  +   I            S    S+LL VGR++D YL+
Sbjct: 337 LIPSVQNEDSMYDVDTVHRILTFFLERIEEEDDECGYDSDSTGQHSSLLKVGRIMDAYLV 396

Query: 716 LVARDQNLRADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYH 775
            +A D  L    F  ++E LP+++R+  D +YRAIDMYLKAHP LTEEER  LC+ +   
Sbjct: 397 EIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKAHPLLTEEERKKLCNFIDCK 456

Query: 776 KLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSW 835
           KLSQ A  H+ +NDRLP++     +  EQ+    R +  +S    +G  V+    G  S 
Sbjct: 457 KLSQEASNHVAQNDRLPVQMVVRVLYTEQL----RLKKALSGDSEEGSWVL--PSGVQSR 516

Query: 836 MMSSQKEISMMKREVETMKGQLNDMQMCKTKLE 851
            +S +   + ++RE   +K +++ M++  ++LE
Sbjct: 517 AVSPRDTYAALRRENRELKLEISRMRVRVSELE 522

[Close]

BLAST of Cp4.1LG04g00630 vs. NCBI nr
Match: XP_023530233.1 (root phototropism protein 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1167 bits (3018), Expect = 0.0
Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR
Sbjct: 181 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI 300

Query: 599 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 658
           RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD
Sbjct: 301 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 360

Query: 659 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 718
           SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP
Sbjct: 361 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 420

Query: 719 QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 778
           QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT
Sbjct: 421 QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 480

Query: 779 TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 838
           TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ
Sbjct: 481 TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 540

Query: 839 LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 541 LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 590

[Close]

BLAST of Cp4.1LG04g00630 vs. NCBI nr
Match: KAG6588470.1 (Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1143 bits (2957), Expect = 0.0
Identity = 576/590 (97.63%), Postives = 583/590 (98.81%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSS+VAESMDRS KNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSLVAESMDRSTKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDFSFHLHKLPMVARSKYLNRMII+NSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFSFHLHKLPMVARSKYLNRMIIRNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCAN+LHIPKRCSEAIA KACMNPE FCNNDYNVDNVKLEVVADNWWFADVSVLR
Sbjct: 181 CESISRCANQLHIPKRCSEAIAFKACMNPEVFCNNDYNVDNVKLEVVADNWWFADVSVLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSA+NGLENSTLQHL KLRSVTVESLI
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAVNGLENSTLQHLNKLRSVTVESLI 300

Query: 599 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 658
           RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCD SDLLVKNYGEDD
Sbjct: 301 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDASDLLVKNYGEDD 360

Query: 659 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 718
           SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP
Sbjct: 361 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 420

Query: 719 QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 778
           QNARVCFDN+YRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT
Sbjct: 421 QNARVCFDNLYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 480

Query: 779 TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 838
           TSFILLEQVMTRPRAEFGMSNGQTK RV+MGESRGGSSWMMSSQKEIS MKREVETMKGQ
Sbjct: 481 TSFILLEQVMTRPRAEFGMSNGQTKSRVMMGESRGGSSWMMSSQKEISRMKREVETMKGQ 540

Query: 839 LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           LND+QMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 541 LNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 590

[Close]

BLAST of Cp4.1LG04g00630 vs. NCBI nr
Match: XP_022933459.1 (coleoptile phototropism protein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1135 bits (2936), Expect = 0.0
Identity = 575/591 (97.29%), Postives = 582/591 (98.48%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSS+VAESMDRSNKNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSLVAESMDRSNKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDF F+LHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFRFNLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCANRLHIPKRCSEAIA KACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS LR
Sbjct: 181 CESISRCANRLHIPKRCSEAIAFKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSFLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLT-KLRSVTVESL 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSA+NGLENSTLQHL  KLRSVTVESL
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAVNGLENSTLQHLNNKLRSVTVESL 300

Query: 599 IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGED 658
           IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCD SDLLVKNYGE 
Sbjct: 301 IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDASDLLVKNYGEG 360

Query: 659 DSVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL 718
           DSVYDVAIVTRVVKSYAAHI+DNSQ+NLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL
Sbjct: 361 DSVYDVAIVTRVVKSYAAHITDNSQTNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL 420

Query: 719 PQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY 778
           PQNARVCFDN+YRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY
Sbjct: 421 PQNARVCFDNLYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY 480

Query: 779 TTSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKG 838
           TTSFILLEQVMTRPRAEFGMSNGQTK RVVMGESRGGSSWMMSSQKEIS MKREVETMKG
Sbjct: 481 TTSFILLEQVMTRPRAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISRMKREVETMKG 540

Query: 839 QLNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           QLND+QMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 541 QLNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 591

[Close]

BLAST of Cp4.1LG04g00630 vs. NCBI nr
Match: XP_022969453.1 (root phototropism protein 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1134 bits (2933), Expect = 0.0
Identity = 576/590 (97.63%), Postives = 580/590 (98.31%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDFSF+LHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDL QGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCANRLHIPK CSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR
Sbjct: 181 CESISRCANRLHIPKCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL KLRSVTVESLI
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVESLI 300

Query: 599 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 658
           RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILE+RLA MLEKCD SDLLVKNYGEDD
Sbjct: 301 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDD 360

Query: 659 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 718
           SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP
Sbjct: 361 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 420

Query: 719 QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 778
           QNARVCFDN+YRAIDMYLKAHPELTE ERTCL SSLKYHKLSQAAREHIMRNDRLPLKYT
Sbjct: 421 QNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPLKYT 480

Query: 779 TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 838
           TSFILLEQVMTR RAEFGMSNGQTK RVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ
Sbjct: 481 TSFILLEQVMTRARAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 540

Query: 839 LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           LND+QMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFAS ST
Sbjct: 541 LNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASLST 590

[Close]

BLAST of Cp4.1LG04g00630 vs. NCBI nr
Match: XP_023530234.1 (root phototropism protein 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1014 bits (2623), Expect = 0.0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 373 MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 432
           MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV
Sbjct: 1   MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 60

Query: 433 APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 492
           APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP
Sbjct: 61  APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 120

Query: 493 KRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR 552
           KRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR
Sbjct: 121 KRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR 180

Query: 553 GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLIRILPFEENSVTSSF 612
           GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLIRILPFEENSVTSSF
Sbjct: 181 GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLIRILPFEENSVTSSF 240

Query: 613 LLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVKS 672
           LLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVKS
Sbjct: 241 LLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVKS 300

Query: 673 YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAI 732
           YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAI
Sbjct: 301 YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAI 360

Query: 733 DMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPR 792
           DMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPR
Sbjct: 361 DMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPR 420

Query: 793 AEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEGQ 852
           AEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEGQ
Sbjct: 421 AEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEGQ 480

Query: 853 VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 481 VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 516

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL
Match: A0A6J1EZU1 (coleoptile phototropism protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440866 PE=3 SV=1)

HSP 1 Score: 1135 bits (2936), Expect = 0.0
Identity = 575/591 (97.29%), Postives = 582/591 (98.48%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSS+VAESMDRSNKNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSLVAESMDRSNKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDF F+LHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFRFNLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCANRLHIPKRCSEAIA KACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS LR
Sbjct: 181 CESISRCANRLHIPKRCSEAIAFKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSFLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLT-KLRSVTVESL 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSA+NGLENSTLQHL  KLRSVTVESL
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAVNGLENSTLQHLNNKLRSVTVESL 300

Query: 599 IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGED 658
           IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCD SDLLVKNYGE 
Sbjct: 301 IRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDASDLLVKNYGEG 360

Query: 659 DSVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL 718
           DSVYDVAIVTRVVKSYAAHI+DNSQ+NLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL
Sbjct: 361 DSVYDVAIVTRVVKSYAAHITDNSQTNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEAL 420

Query: 719 PQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY 778
           PQNARVCFDN+YRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY
Sbjct: 421 PQNARVCFDNLYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKY 480

Query: 779 TTSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKG 838
           TTSFILLEQVMTRPRAEFGMSNGQTK RVVMGESRGGSSWMMSSQKEIS MKREVETMKG
Sbjct: 481 TTSFILLEQVMTRPRAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISRMKREVETMKG 540

Query: 839 QLNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           QLND+QMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 541 QLNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 591

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL
Match: A0A6J1I108 (root phototropism protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468448 PE=3 SV=1)

HSP 1 Score: 1134 bits (2933), Expect = 0.0
Identity = 576/590 (97.63%), Postives = 580/590 (98.31%), Query Frame = 0


Query: 299 MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 358
           MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI
Sbjct: 1   MTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLI 60

Query: 359 VRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 418
           VRVGDFSF+LHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK
Sbjct: 61  VRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMK 120

Query: 419 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKS 478
           FCYGWKVDLTAKNVAPLYCAAHFLEMTDDL QGNLTSKAEAFMSFVISSSWNDTFKVLKS
Sbjct: 121 FCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKS 180

Query: 479 CESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 538
           CESISRCANRLHIPK CSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR
Sbjct: 181 CESISRCANRLHIPKCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLR 240

Query: 539 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLI 598
           IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL KLRSVTVESLI
Sbjct: 241 IDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVESLI 300

Query: 599 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 658
           RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILE+RLA MLEKCD SDLLVKNYGEDD
Sbjct: 301 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDD 360

Query: 659 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 718
           SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP
Sbjct: 361 SVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALP 420

Query: 719 QNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYT 778
           QNARVCFDN+YRAIDMYLKAHPELTE ERTCL SSLKYHKLSQAAREHIMRNDRLPLKYT
Sbjct: 421 QNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPLKYT 480

Query: 779 TSFILLEQVMTRPRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 838
           TSFILLEQVMTR RAEFGMSNGQTK RVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ
Sbjct: 481 TSFILLEQVMTRARAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQ 540

Query: 839 LNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           LND+QMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFAS ST
Sbjct: 541 LNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASLST 590

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL
Match: A0A6J1F4Y3 (coleoptile phototropism protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440866 PE=3 SV=1)

HSP 1 Score: 989 bits (2556), Expect = 0.0
Identity = 504/517 (97.49%), Postives = 509/517 (98.45%), Query Frame = 0


Query: 373 MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 432
           MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV
Sbjct: 1   MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 60

Query: 433 APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 492
           APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP
Sbjct: 61  APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 120

Query: 493 KRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR 552
           KRCSEAIA KACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS LRIDHFIEVIESGKRR
Sbjct: 121 KRCSEAIAFKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSFLRIDHFIEVIESGKRR 180

Query: 553 GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLT-KLRSVTVESLIRILPFEENSVTSS 612
           GMRSEVIGSCIAHWTMRWFSSA+NGLENSTLQHL  KLRSVTVESLIRILPFEENSVTSS
Sbjct: 181 GMRSEVIGSCIAHWTMRWFSSAVNGLENSTLQHLNNKLRSVTVESLIRILPFEENSVTSS 240

Query: 613 FLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVK 672
           FLLHILKLGSVMKIDSELLTILESRLAMMLEKCD SDLLVKNYGE DSVYDVAIVTRVVK
Sbjct: 241 FLLHILKLGSVMKIDSELLTILESRLAMMLEKCDASDLLVKNYGEGDSVYDVAIVTRVVK 300

Query: 673 SYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRA 732
           SYAAHI+DNSQ+NLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDN+YRA
Sbjct: 301 SYAAHITDNSQTNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNLYRA 360

Query: 733 IDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRP 792
           IDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRP
Sbjct: 361 IDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRP 420

Query: 793 RAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEG 852
           RAEFGMSNGQTK RVVMGESRGGSSWMMSSQKEIS MKREVETMKGQLND+QMCKTKLEG
Sbjct: 421 RAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISRMKREVETMKGQLNDIQMCKTKLEG 480

Query: 853 QVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           QVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST
Sbjct: 481 QVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 517

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL
Match: A0A6J1I118 (root phototropism protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468448 PE=3 SV=1)

HSP 1 Score: 984 bits (2544), Expect = 0.0
Identity = 503/516 (97.48%), Postives = 506/516 (98.06%), Query Frame = 0


Query: 373 MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 432
           MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV
Sbjct: 1   MVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNV 60

Query: 433 APLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 492
           APLYCAAHFLEMTDDL QGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP
Sbjct: 61  APLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIP 120

Query: 493 KRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR 552
           K CSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR
Sbjct: 121 KCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRR 180

Query: 553 GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLTKLRSVTVESLIRILPFEENSVTSSF 612
           GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL KLRSVTVESLIRILPFEENSVTSSF
Sbjct: 181 GMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVESLIRILPFEENSVTSSF 240

Query: 613 LLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDDSVYDVAIVTRVVKS 672
           LLHILKLGSVMKIDSELLTILE+RLA MLEKCD SDLLVKNYGEDDSVYDVAIVTRVVKS
Sbjct: 241 LLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDDSVYDVAIVTRVVKS 300

Query: 673 YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAI 732
           YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDN+YRAI
Sbjct: 301 YAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNLYRAI 360

Query: 733 DMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRPR 792
           DMYLKAHPELTE ERTCL SSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTR R
Sbjct: 361 DMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRAR 420

Query: 793 AEFGMSNGQTKGRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDMQMCKTKLEGQ 852
           AEFGMSNGQTK RVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLND+QMCKTKLEGQ
Sbjct: 421 AEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDIQMCKTKLEGQ 480

Query: 853 VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASFST 888
           VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFAS ST
Sbjct: 481 VKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASLST 516

[Close]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL
Match: A0A6J1DSE7 (root phototropism protein 3-like OS=Momordica charantia OX=3673 GN=LOC111023868 PE=3 SV=1)

HSP 1 Score: 963 bits (2490), Expect = 0.0
Identity = 490/606 (80.86%), Postives = 533/606 (87.95%), Query Frame = 0


Query: 287 LEYRIATIVPVEMTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWI 346
           +E R ATI P+EMTE RRNL+REIPTCGSVIGGK NKC+IFPVKS +VAESM+RSNKNWI
Sbjct: 1   MECRFATIDPIEMTEARRNLDREIPTCGSVIGGKHNKCIIFPVKSILVAESMERSNKNWI 60

Query: 347 VQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNL 406
           VQTKPAYESDL V+VGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQ NNS  TI++DNL
Sbjct: 61  VQTKPAYESDLFVQVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQNNNSAITIQIDNL 120

Query: 407 PGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTSKAEAFMSFVIS 466
           PGG MAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDL QGNL SKAEAF+SFVIS
Sbjct: 121 PGGPMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLAQGNLISKAEAFLSFVIS 180

Query: 467 SSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEAFCNNDYNVDNVKLEVVA 526
           SSW DTFKVLKSCESIS+ A RLH+P RCSEAIA KACMNPE+FCN DYNVDNVKLE VA
Sbjct: 181 SSWKDTFKVLKSCESISQWAQRLHVPARCSEAIARKACMNPESFCNRDYNVDNVKLESVA 240

Query: 527 DNWWFADVSVLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL 586
           DNWWF DV VLRIDHFIEVIESGKRRGM+SEV+GSC+ HWTMRWF+ AMNGLE   LQ+ 
Sbjct: 241 DNWWFEDVLVLRIDHFIEVIESGKRRGMKSEVVGSCVVHWTMRWFARAMNGLETLMLQYF 300

Query: 587 T-KLRSVTVESLIRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCD 646
           T KL+ +T+ESLIR+LP EENSV +SFL HILKLGSVMKID ELL  LESRL MMLEKC 
Sbjct: 301 TDKLKVITLESLIRLLPVEENSVPASFLFHILKLGSVMKIDYELLIKLESRLTMMLEKCR 360

Query: 647 TSDLLVKNYGEDDSVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNL 706
            SDLLVKNYG+ D VYDVAIVTRVVK YA+HI  NSQSNLL VGRLVDDYL+LVARDQNL
Sbjct: 361 ASDLLVKNYGDADGVYDVAIVTRVVKYYASHIFLNSQSNLLAVGRLVDDYLLLVARDQNL 420

Query: 707 RADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAARE 766
           +AD F+VL EALPQNAR+CFDN+Y AIDMYLKAHPE TEEERTCLC SLKYHKLS+ AR+
Sbjct: 421 KADGFRVLAEALPQNARLCFDNLYSAIDMYLKAHPESTEEERTCLCRSLKYHKLSEEARK 480

Query: 767 HIMRNDRLPLKYTTSFILLEQV-MTRPRAEFGMSNGQTKGRVVMGESR-GGSSWMMSSQK 826
           HI +NDRLPLKY TSFILLEQV M +P   FG S  Q K R+ MGESR  G+SWMMSSQK
Sbjct: 481 HITKNDRLPLKYITSFILLEQVSMKKPTTAFGSSYRQAKSRIGMGESRCPGTSWMMSSQK 540

Query: 827 EISMMKREVETMKGQLNDMQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKM-NIG 886
           EI++MKREVETMK QLND+QMCKTKL+GQVKKGFNYKKN ASVRKIVCLGFN +K  ++G
Sbjct: 541 EINLMKREVETMKVQLNDIQMCKTKLQGQVKKGFNYKKNLASVRKIVCLGFNDSKFGSLG 600

Query: 887 FASFST 888
           FA  ST
Sbjct: 601 FAPLST 606

[Close]

BLAST of Cp4.1LG04g00630 vs. TAIR 10
Match: AT5G64330.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 329.7 bits (844), Expect = 7.2e-90
Identity = 227/671 (33.83%), Postives = 337/671 (50.22%), Query Frame = 0


Query: 336 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKN 395
           +  +   ++W V T     SDL+V++GD +FHLHK P+++RS  +NR+I ++      ++
Sbjct: 37  DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96

Query: 396 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTS 455
              + + LD+LPGG  AFEL  KFCYG  VDLTA N++ L CAA +LEMT+DL +GNL  
Sbjct: 97  PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156

Query: 456 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEA------ 515
           K EAF+S+V+ SSW D+  VLKSCE +S  A  L I +RCSE+IA KAC NP+       
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216

Query: 516 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 575
                                     +C+   N ++   + V  +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276

Query: 576 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 635
            VI + K +GMR E++G+ I H+  +W                SSA+             
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336

Query: 636 ----------------------------NGLENST-----LQHLTKLRSVTVESLIRILP 695
                                       NG ++S      L    K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396

Query: 696 FEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNY-GEDDSVY 755
            +++SVT SFLL +L+  +++K+   L+T LE R+ M  E+    DLL+  Y  + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456

Query: 756 DVAIVTRVVKSYAAHI---------------------------------SDNSQSNLLVV 815
           DV +V R+++ +                                       N+Q+  + V
Sbjct: 457 DVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRV 516

Query: 816 GRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNMYRAIDMYLKAHPELTEEERT 855
            RLVD YL  VARD+NL    FQVL EALP++AR C D +YRAID YLKAHP L+E ER 
Sbjct: 517 ARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERK 576

[Close]

BLAST of Cp4.1LG04g00630 vs. TAIR 10
Match: AT5G64330.2 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 287.7 bits (735), Expect = 3.1e-77
Identity = 186/531 (35.03%), Postives = 270/531 (50.85%), Query Frame = 0


Query: 336 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLNRMIIQNSSHEVQKN 395
           +  +   ++W V T     SDL+V++GD +FHLHK P+++RS  +NR+I ++      ++
Sbjct: 37  DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96

Query: 396 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLTQGNLTS 455
              + + LD+LPGG  AFEL  KFCYG  VDLTA N++ L CAA +LEMT+DL +GNL  
Sbjct: 97  PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156

Query: 456 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIALKACMNPEA------ 515
           K EAF+S+V+ SSW D+  VLKSCE +S  A  L I +RCSE+IA KAC NP+       
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216

Query: 516 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 575
                                     +C+   N ++   + V  +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276

Query: 576 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 635
            VI + K +GMR E++G+ I H+  +W                SSA+             
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336

Query: 636 ----------------------------NGLENST-----LQHLTKLRSVTVESLIRILP 695
                                       NG ++S      L    K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396

Query: 696 FEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNY-GEDDSVY 740
            +++SVT SFLL +L+  +++K+   L+T LE R+ M  E+    DLL+  Y  + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456

[Close]

BLAST of Cp4.1LG04g00630 vs. TAIR 10
Match: AT5G10250.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-74
Identity = 187/584 (32.02%), Postives = 305/584 (52.23%), Query Frame = 0


Query: 322 NKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFHLHKLPMVARSKYLN 381
           NK +IFP +   +A S ++ +++W V  K    +DL ++V D +F  HK P++++  Y++
Sbjct: 21  NKSIIFPSRVVTLANSFEKKDRSWYV--KSQIPTDLSIQVNDITFKAHKFPLISKCGYIS 80

Query: 382 RMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHF 441
            + ++ S+ E     +   ++L+N PGGA  FE ++KFCY   +DL   NVAPL CA+ +
Sbjct: 81  SIELKPSTSE-----NGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEY 140

Query: 442 LEMTDDLTQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKRCSEAIAL 501
           L MT++   GNL SK EAF++FV+ +SW DT  VL+SC ++S  A  L I +RC + +A 
Sbjct: 141 LYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDLLAW 200

Query: 502 KACMNPEAFCNNDYNVDNVKLEVVADN--WWFADVSVLRIDHFIEVIESGKRRGMRSEVI 561
           KAC           N +N+  +VV  N    + D++ L IDHF+ VI + K R  + ++ 
Sbjct: 201 KAC-----------NDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQIT 260

Query: 562 GSCIAHWT-------------MRWFSSAMNGLENST----LQHLTKL----RSVTVESLI 621
           G  I  +              ++ +    N L+ S     ++    L       T+ESL+
Sbjct: 261 GKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLV 320

Query: 622 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILESRLAMMLEKCDTSDLLVKNYGEDD 681
            +LP +  +V+  FLL +LK   V      L++ LE R+ M LE  +  DLL+ N+  ++
Sbjct: 321 SVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEE 380

Query: 682 SVYDVAIVTRVVKSYAAHISDNSQSNLL---VVGRLVDDYLMLVARDQNLRADCFQVLVE 741
               V    R+ + +  H     Q  +L    + +L+D+YL  +A+D  L    FQVL E
Sbjct: 381 QQERV----RIFEFFLMH----EQQQVLGKPSISKLLDNYLAEIAKDPYLPITKFQVLAE 440

Query: 742 ALPQNARVCFDNMYRAIDMYLKAHPELTEEERTCLCSSLKYHKLSQAAREHIMRNDRLPL 801
            LP+NA  C D +YRAIDM+LK HP L++ +R  LC ++   KLS  A  H  +NDRLPL
Sbjct: 441 MLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPL 500

Query: 802 K----YTTSFILLEQVMTR-------PRAEFGMSNGQTKGRVVMGESRGGSSWMMSSQKE 861
           +      T  +  EQV  R       P  E   S G+   R+    SR  +  + + ++E
Sbjct: 501 RTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRM----SR-DNEIIKTLKEE 560

Query: 862 ISMMKREVETMKGQLNDMQMCKTKLEGQVKKGFNYKKNFASVRK 869
           +  +K+++  ++   N++Q    +L  + K   N+   +  V+K
Sbjct: 561 LENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKK 573

[Close]

BLAST of Cp4.1LG04g00630 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-70
Identity = 164/263 (62.36%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 19  MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 78
           MDQQ HGQ          G + YG+N Y    +     S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTNPM-----STTAATVAGG---AAQPG---- 60

Query: 79  GQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 138
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 139 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 198
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 199 PREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQ 258
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P       A  
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNPG-----GAYP 229

Query: 259 SHPYMPPQMWQHTQDQAP--PDQ 279
            +PYM   MW   Q QAP  PDQ
Sbjct: 241 PNPYMGQPMW---QQQAPDQPDQ 229

[Close]

BLAST of Cp4.1LG04g00630 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-70
Identity = 164/263 (62.36%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 19  MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 78
           MDQQ HGQ          G + YG+N Y    +     S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTNPM-----STTAATVAGG---AAQPG---- 60

Query: 79  GQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 138
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 139 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 198
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 199 PREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQ 258
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P       A  
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNPG-----GAYP 229

Query: 259 SHPYMPPQMWQHTQDQAP--PDQ 279
            +PYM   MW   Q QAP  PDQ
Sbjct: 241 PNPYMGQPMW---QQQAPDQPDQ 229

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMF5	1.0e-88	33.83	Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2	[more]
Q5KS50	1.5e-84	32.62	Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CP...	[more]
Q9LFU0	1.6e-73	32.02	BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 P...	[more]
Q8L4B2	4.0e-69	62.36	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9C9Z0	8.9e-69	34.31	Putative BTB/POZ domain-containing protein At3g08660 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Cp4.1LG04g00630 vs. NCBI nr


Match Name	Identity	Description
XP_023530233.1	100.00	root phototropism protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6588470.1	97.63	Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022933459.1	97.29	coleoptile phototropism protein 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022969453.1	97.63	root phototropism protein 3-like isoform X1 [Cucurbita maxima]	[more]
XP_023530234.1	100.00	root phototropism protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG04g00630 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EZU1	97.29	coleoptile phototropism protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I108	97.63	root phototropism protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F4Y3	97.49	coleoptile phototropism protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I118	97.48	root phototropism protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DSE7	80.86	root phototropism protein 3-like OS=Momordica charantia OX=3673 GN=LOC111023868 ...	[more]

BLAST of Cp4.1LG04g00630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64330.1	7.2e-90	33.83	Phototropic-responsive NPH3 family protein	[more]
AT5G64330.2	3.1e-77	35.03	Phototropic-responsive NPH3 family protein	[more]
AT5G10250.1	1.1e-74	32.02	Phototropic-responsive NPH3 family protein	[more]
AT1G08970.4	2.8e-70	62.36	nuclear factor Y, subunit C9	[more]
AT1G08970.1	2.8e-70	62.36	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000210	BTB/POZ domain	SMART	SM00225	BTB_4	coord: 355..459 e-value: 1.3E-5 score: 34.7
IPR000210	BTB/POZ domain	PFAM	PF00651	BTB	coord: 355..446 e-value: 9.4E-11 score: 41.9
IPR000210	BTB/POZ domain	PROSITE	PS50097	BTB	coord: 355..429 score: 11.771103
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 121..184 e-value: 1.7E-17 score: 63.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 83..199 e-value: 2.2E-47 score: 162.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 90..193
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 347..494 e-value: 2.2E-13 score: 52.3
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 354..446
IPR027356	NPH3 domain	PFAM	PF03000	NPH3	coord: 528..763 e-value: 2.5E-66 score: 224.0
IPR027356	NPH3 domain	PROSITE	PS51649	NPH3	coord: 528..788 score: 63.705044
None	No IPR available	PANTHER	PTHR32370:SF148	COLEOPTILE PHOTOTROPISM PROTEIN 1-LIKE ISOFORM X1	coord: 332..855
IPR043454	NPH3/RPT2-like family	PANTHER	PTHR32370	OS12G0117600 PROTEIN	coord: 332..855

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00630.1	Cp4.1LG04g00630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0005515	protein binding