Cp4.1LG04g00480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCTCGTCGATCTTATCCACAATACGTGCCGATTCAATGGACTTGCCACGTCACCATTTCCCTCCTGGATCGAATCCAACGGTTTAGATCTTTCAACAAACATGTTCGACATTTAACGCCCTCCTCCTCCTTTTAACTCACTCCACCGCTCCCCTATCGCCTCACTCTCTCTCTGACCCTTTTCTGATCGGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCCATGGGGCTACTGGACCAGCTGTGGGACGACACGCTTGCCGGACCGATGCCGGACTCCGGTCTGGGAAAGCTCCGCAAGCACCCATCCTTCACTTCCCGGTCCACCGCCGTCAAGGGTACGCCGCCACGGACCATAATTTAAAACCACAAATTTCATTACAAATTTCGCTTTATAAAAATTTGAACTTTAATTTAATTAACTTCAAAAGAATTTAATTAACTCAAATTTGGCTTTAATGGTGTTGGGCAGAATCCAATGGGAAGAGTTACGGGGAAGGAACGCCGCCGTCCTCGTCGGAGGAGCCACTTAAAGTTTCCAGACGAATTATGATCGTAAAGCCGCCGGGTTATCAGTACGGTTCGCCGCCGGTTTCGCCGGCCGGCTCCTCCACGCCGCCACTTTCTCCTTTTTCCGGTAATTTCTAGAGCCTTCTTTCTGTTAAAGCTGAAAACTATAATTACATTATCGGCGGAGGGAGGCGGAGTTATCCACAAAGTGAGGAGATCTGGACCGGTTTTTTGTCGTTTTGTGGAGTTGTCACTTTATCCGTGGACAATACATTCCGAGTAGTAATAATTAAGTGTGGGATGTGAAATGACTATAATACCCTCCATGCATGACTTAGTCTTCCTATGCCTATTCTATTACTTATCCAATAAGTTCATAATTTTTGTTTTACGTTTAATATCATTTGTTTAGAGTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTGTTGACAAATTTTATCAATATTATGGAGGTAGAGAATCATTCCGATTTCGAAGAAGATCGACGTCAGATGCTTACGAGAAGACGACAAGCGAAGTCGGACCTCGGACTCCTACTTCTCCTTATGACATGCGAGATATGATATGATATGATATGATATGAACTCGTGATCTTCTTCAGCTTGATGGGTCGATGATGGATGATGACTATGATGTAATATGAGTCTTTAAATAGTGTTAGCTTTTTGTTGAGAAATGTCGAAAACGGAGTCGTGAGCTTATGTGTGTAATAGTTCTAATTACGTGTTTGGGTTTGTTATGAAGTGTGTGTGTGGGCATGTTGTTGTGTATATGAATGAGTGATGGGAAGACAATATCTTTTTAAGAATAATTTTAATTTGATGTGATTTATTTTAATTCTAGAATTAAATGAAGCATTATTTTAGGGTTTTAATTTTAATTTAAGAGAGTGTATAGAGATAGG TCTCCTCGTCGATCTTATCCACAATACGTGCCGATTCAATGGACTTGCCACGTCACCATTTCCCTCCTGGATCGAATCCAACGGTTTAGATCTTTCAACAAACATGTTCGACATTTAACGCCCTCCTCCTCCTTTTAACTCACTCCACCGCTCCCCTATCGCCTCACTCTCTCTCTGACCCTTTTCTGATCGGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCCATGGGGCTACTGGACCAGCTGTGGGACGACACGCTTGCCGGACCGATGCCGGACTCCGGTCTGGGAAAGCTCCGCAAGCACCCATCCTTCACTTCCCGGTCCACCGCCGTCAAGGAATCCAATGGGAAGAGTTACGGGGAAGGAACGCCGCCGTCCTCGTCGGAGGAGCCACTTAAAGTTTCCAGACGAATTATGATCGTAAAGCCGCCGGGTTATCAGTACGGTTCGCCGCCGGTTTCGCCGGCCGGCTCCTCCACGCCGCCACTTTCTCCTTTTTCCGGTAGAGAATCATTCCGATTTCGAAGAAGATCGACGTCAGATGCTTACGAGAAGACGACAAGCGAAGTCGGACCTCGGACTCCTACTTCTCCTTATGACATGCGAGATATGATATGATATGATATGATATGAACTCGTGATCTTCTTCAGCTTGATGGGTCGATGATGGATGATGACTATGATGTAATATGAGTCTTTAAATAGTGTTAGCTTTTTGTTGAGAAATGTCGAAAACGGAGTCGTGAGCTTATGTGTGTAATAGTTCTAATTACGTGTTTGGGTTTGTTATGAAGTGTGTGTGTGGGCATGTTGTTGTGTATATGAATGAGTGATGGGAAGACAATATCTTTTTAAGAATAATTTTAATTTGATGTGATTTATTTTAATTCTAGAATTAAATGAAGCATTATTTTAGGGTTTTAATTTTAATTTAAGAGAGTGTATAGAGATAGG ATGGGGCTACTGGACCAGCTGTGGGACGACACGCTTGCCGGACCGATGCCGGACTCCGGTCTGGGAAAGCTCCGCAAGCACCCATCCTTCACTTCCCGGTCCACCGCCGTCAAGGAATCCAATGGGAAGAGTTACGGGGAAGGAACGCCGCCGTCCTCGTCGGAGGAGCCACTTAAAGTTTCCAGACGAATTATGATCGTAAAGCCGCCGGGTTATCAGTACGGTTCGCCGCCGGTTTCGCCGGCCGGCTCCTCCACGCCGCCACTTTCTCCTTTTTCCGGTAGAGAATCATTCCGATTTCGAAGAAGATCGACGTCAGATGCTTACGAGAAGACGACAAGCGAAGTCGGACCTCGGACTCCTACTTCTCCTTATGACATGCGAGATATGATATGA MGLLDQLWDDTLAGPMPDSGLGKLRKHPSFTSRSTAVKESNGKSYGEGTPPSSSEEPLKVSRRIMIVKPPGYQYGSPPVSPAGSSTPPLSPFSGRESFRFRRRSTSDAYEKTTSEVGPRTPTSPYDMRDMI Homology
BLAST of Cp4.1LG04g00480 vs. ExPASy Swiss-Prot
Match: Q8LD26 (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-31 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.2e-07 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. NCBI nr
Match: XP_023530291.1 (dormancy-associated protein homolog 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265 bits (676), Expect = 3.34e-89 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. NCBI nr
Match: XP_022925438.1 (dormancy-associated protein homolog 3-like isoform X1 [Cucurbita moschata] >KAG6588486.1 Dormancy-associated protein-like 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (668), Expect = 5.55e-88 Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. NCBI nr
Match: XP_022970123.1 (dormancy-associated protein homolog 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 256 bits (653), Expect = 1.08e-85 Identity = 127/131 (96.95%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. NCBI nr
Match: XP_038878372.1 (dormancy-associated protein homolog 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 217 bits (552), Expect = 2.23e-70 Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. NCBI nr
Match: XP_004135608.1 (dormancy-associated protein homolog 3 isoform X1 [Cucumis sativus] >KGN66063.1 hypothetical protein Csa_006915 [Cucumis sativus]) HSP 1 Score: 205 bits (522), Expect = 1.02e-65 Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy TrEMBL
Match: A0A6J1EF66 (dormancy-associated protein homolog 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432734 PE=3 SV=1) HSP 1 Score: 261 bits (668), Expect = 2.69e-88 Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy TrEMBL
Match: A0A6J1I2Y2 (dormancy-associated protein homolog 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469111 PE=3 SV=1) HSP 1 Score: 256 bits (653), Expect = 5.22e-86 Identity = 127/131 (96.95%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy TrEMBL
Match: A0A0A0LWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569400 PE=3 SV=1) HSP 1 Score: 205 bits (522), Expect = 4.92e-66 Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy TrEMBL
Match: A0A6J1CWL2 (dormancy-associated protein homolog 3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015241 PE=3 SV=1) HSP 1 Score: 202 bits (515), Expect = 4.88e-65 Identity = 108/130 (83.08%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. ExPASy TrEMBL
Match: A0A1S3BPL3 (dormancy-associated protein homolog 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492161 PE=3 SV=1) HSP 1 Score: 197 bits (502), Expect = 6.68e-63 Identity = 111/137 (81.02%), Postives = 114/137 (83.21%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. TAIR 10
Match: AT1G56220.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 136.7 bits (343), Expect = 1.3e-32 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. TAIR 10
Match: AT1G56220.3 (Dormancy/auxin associated family protein ) HSP 1 Score: 135.6 bits (340), Expect = 2.9e-32 Identity = 80/144 (55.56%), Postives = 97/144 (67.36%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. TAIR 10
Match: AT1G56220.2 (Dormancy/auxin associated family protein ) HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. TAIR 10
Match: AT1G56220.4 (Dormancy/auxin associated family protein ) HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Cp4.1LG04g00480 vs. TAIR 10
Match: AT1G54070.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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