Cp4.1LG04g00410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g00410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase RFI2-like
Location	Cp4.1LG04: 1664540 .. 1670555 (-)
RNA-Seq Expression	Cp4.1LG04g00410
Synteny	Cp4.1LG04g00410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAAAAAAAAGAAAAGAAAAAACATCTTCTTCTTTCTCCTTACATCTCTGTTCTTTCAGAAATTCTCTCTCGTCTGTTCGTTCACCCCTGTCTTTTGATTTAAGGAACACCTCTTCTTTTTCCCCTTTTCCACTTCGATTCTTTTACGAATTCCCCTCCTTCACTAGAATCTCGATTTGTATTTTTGTTCAACGATTTGTTTGGTTTCTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGTTCTTCGATTGGTGGCTTAGGGGTTTTAGATTTTTGGTTCTTACATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGGTGAGTTTTTTTAACGAATTGCCCTCTTTTTTGTTCCCTCTTGTTGAAACTTGTGTATTTTGGGCGTAATATGGATTTAGGGTCCTTGTGATTTTAGATCTGTTTCTTCTTTTCTTTTGCTGAAATTACAACTCTTAAGTTTGTGTTTTTGTTGTTTCAATTGTTTTTGTCAGAAAAGGAAATGGTTTAGATTAGATACATATTTTCTTTTTTGGTTGATTCTTTTATTGTACTTCTTTTTTGTTTTCTTAGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGTAAGCGATTGTCTTTCATTGATTCACTCATGTACGTTACGTTTTGGGTATCCATGGAAATTTTCAATCATCAGAGCACCATGTGAACAAGAACAAGAAGTTAAATTAACCGGGAACTGATAATTGTGATGCAAACTTTTCCTTTCACTTTGGGAAATGTTCTTCAACTGTTCTAGATTTTAATCTGCATAGTCAAAAGCGGTGTCCCATAGGGAGATGGTTGATACTTGGAATCATTTGAAGTCCTCGCTGTTTAAAAGGCGAACGAACTAGTTCCCTCTCAATAATTATTACTAAAAATTGTGGCTCCTTTTTTAATCACTGATTATTTTTCGTTTATTTTTAATTACTTCTGTTGTAATTTTTATCTTTTATGGTCTGACATTTGTTAGGTTGACCGATGTTTTTGTGGCCTTCTTAGGTAGTTCTGTATCTTTGGTGACAGCAAGTTTTATCATTTAAAATAGTTCATTGTGTGAATTGATTTGAAATGTGCTCGAGGCTGATGCTCAGAAACGACATGCCTAAATTCCAGTGCATTCACGTTTAAATACTTGGGTGTTATAAATCATGTTTATAGATTTATCTTGCATGAGTTCATATTCTAAATGGGTCATGACCTGCTTGTTTACTCATTGTATTAAGTTCTTTCCACCAAATTTTAGCTGGAATTTGATTTGTTGCAGGCCTTTGGAGTTCAATGGTGTCCTTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGTAAGTTTTGATTTGTTCATTAATGATATAAGGATAATTGACGCTCCGGTTTTTATGTTGATGTCTTCTTTCTTGGTTCTGTTCCTGTTCTCTAAATTGGTTATATATGATGCGTTGATACTTATTAGTTGGTAACTGATTCCTATCTAAAACTTTACAGCTTGGATTTGGAAACTAAAGGCATTTTTTTGCAGTGTAAGGTGGGAGAGAATATGTTGTTTCCTTCTAAATGCTGAGATATCAACTTGAGTTTTGAAAACTTAAATACATCCTTTTCAATAAAAGATTCAAGGAAAGTAACAAATCTCATCGAGAAATCTTAGAGCTTGAATCGTCACATGATTTTAGTTAATAGAATTAAATGTAAGTATGTGGATGACACTGAATTGCTATTTTTCTGCCTTTGATGTGGGTGATGTCTTTATTGTTCCCCGATAAATTCTGTTCAGAACTACCATCTCAGCATTACGTTTCTTCTTCTTCTAATATAATTTCATTGATGAGAATGAAGGAAAAATTTCCAAGGAATACAGAACAGGCATACCAATTGGAAGAAAAAATAGATGGAGAGTAACCACTAAATTCTCTAGTTGGAGGGCTCAATAAGGAAGTACCCCAAACAATAGCATCCCATGTTTCCATTCAATCTCAAAATCTCTTCATCAAAATGTTCCAAAATGTGGCTCTAATGGCATTTGATTATAAGACATTGGCTTACTTTTTTAACAAGGAGCAATGGAACCAAGAGTGATTTCTATGGTGCACTGAGTTGGGGAGAGATTCATATTGAAGGTTTGAAGCAGTTTTCATTGAACATGGAGCAAGGGAAACTTTAATAAAGCTGATCTCCTCTCTTACAAATTATAATCGAGTATGCTTCGGTTGGAGGGAAACGATTTGTACTTTGGACTTAATCATTAGTGTCAAGACCTCTGCCTTTAAGAATAATAATCCATTCAAATACCTTTCCTTCTTCATGTCTTTCTTTCCAGTTGAAGCTTGGAAGATAGCTTTAGAGAGATCACCAGCACCACATAAAGCCTACAAAGAGAGAGCTTGCCATGAAGGCCCTCAAACAAATGTGTTGATTTGGAAATTTTCATTTTGATTAATTGGGTATAATTAACAAGGTTGCCTGATCTACCTTCGACTTGAAGAAAGGAAGGATTTCTTTTTTATTTTTTTGAGTTGCCTTTCTTTTATTTGTTCAATCTCTCTTTGTTTATCCATAGTTGATATTGGGGATCTTCATTGTGGTTGGGGTGCCATAGATGTTCTTATAGAAATACAAAAGGTATTACCCATCTCATACAATACTGTATGAACCTATGAATAGGCTTTGCAAGAACAATAAAAGGTTGCACAATGTATGGTAGAGTTTCTTGGTCTAATCATTTGAGGATGACTCCCCCAGAATTCTTGCAAGTGACATGTGTTCCGGTAAAAAGTACAGTAACCATGTAATACTAGCATGTTATGCTCGGTTGACCGTCAAAATTTTAGCCTCCTTGCACTCTTTAGATTTCAGAAGTTCCGTGGCTGATCAAGATGAGAATGAATTCAGGAGTCTAGGACGGACATTCTGGAGCTTCTGCTCTTCTTCAGCCATTCTTATAAAGAGGGGCCAAGAAAGGGTGAACTTTGCAATACCAACCAAGAAGGGAGAATGAATGCCTCAAAAATCAACTGTTTCCCTGAGTCATAAAGCTGCTTCTTGGATTGTTGTAGAATAAGTAGTAAAAATGACTTTACTTGAAAGAACGTTACTGGAACGAGAGGGAATCACTTGCCGGTCTTCCTCCTTTAGTAGCTCTTTACTGGTAGGTGCACTTATGCCATTTCTAATGGCCTATTTGGTTGTCTTGCTATGCACCACTTGAAAATTTTCATTGAATAATGAAATTTTCTTTGCCTACTTTACAACGCGTTAGGGAAGACGATCCTTTCCCTTTCAATAGTGGTCTCGTTCTCATCAACAACGACGGCTGCTGAGAATGATGAGATTCATATGAATAATTTTATAAATTTTCAGATTCTATATATGTATGGGCTGTTCTATGCTGCTAGCCAAACAGAAATTTAGACAGATCTTTGTTGCAATTATTGTGTAAATACAGAATCTTCCATCCTGATGTCTTGAATCGTTCTCATGTTTAACTTTTTCAGGGATGGCGACTTATCGTCAACTGCTTGTAAGATTTCTCTCCCCCACAGAAATTGTTGATCCATTTTTTAGCTGCAGTTTGAGGAAGCAACCAAATTTGACCGGGTTGATAATGTTGTGATGCAGATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGCCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCGTCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCATTCACTGCCCTTTTCCACAACAAACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCGGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTCGGTCATAGGTATGTCTTAACATAATTGGATATAACCAGTTGAACTTCTTAGTCTTAACGTTACAGAAATACAATGCAGCATTGCCTATGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGAACTTTTCCTTTCGGACGTTTCCTCAAGGTTCTTAAAACGCGTCTGCTAGGGCAAGGTTTCCACACCCTTATAAAGAATACTTCGTTCTCCTTCCCAACCAATGTGGGATCTCACAATCTACCCTCCTTCGAGGCCTAGCGTTCTTCCTAGCACACAGTCTTGTGTACACCTCCCTTCGGGTTTCAGTCTCCTCACTGACATATTGCCCGGTGTCTGGCTCTTATACCATTTGTAGCAGCCTAAGTCCACGGTTACAGGCTGTCTTGTTGTGGAGGCAGTTTCCTTACCTCCGACACTGGTTTATAGCCGTGTGTACCACTTAATTGTTTGCCTGTTGTAGTAGGACCTAAATCTTCTATAAGACATAATACAGCCTTTTACTTATATTTGGTTATCTCAAGCATCGTGAGAAACAGCCCTTTTCTCTTTTCTCAAACAGAAAGAAGCCCTTTAATTTGAACAATATCTTCTTTTGATTCACAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCATATTATCAACAACCTAGCACTACAGGAAGCATTCGCCCACCTGCAATTTCTGGTGCCAGAAGATCAAGTAATCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCCGCATCATCGGGTCGTAATTTCCAACTGGAGAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGCGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCGCAAAATTGGTCATAGACCAACCATCATTTACTTACCGATTCCCGGTGAGGCTAAAACTATCACTATGATGACTTGAAACTGAAATTTATGTAATGATTGGGATGATATGTAATGGCCGAGTCTTTGATGTGCCGCTAGACTCTATATGCTGTGAGAGCAGCCGATAAGAAAAAAAACAAGCTCGCTTCGAGTTACCGATATGGTTAGTGTGGTGATGGACTTGGCTTCCTTGAGATTGTCTACCCTGGAGGTTATAGAATAACGTTATGAATCGGATGGGAAAACTAAGATTTGTAGGTAACATCCTTTTCCTGTTTGTGTTCGTGTTGGTGTTCATGTCCCATCCAATTCATAAGGATGTTGGAGTAACTTGGGGTAGCTCGGGAGGGCCAGATTAGTGAATTTGGTAAATTGTATTCTTGCAGTGATAGTTGAAAATATTCAGTGTTTATTTGTAAACAATGAAACGTGGTGGTTTCAGTAATGTATGAGCAGAACAGGACAGGTCAGCTTTTGGTTTTTGACTTCATGAGACTTCATGAGAGTGTTCATAATATATATATATATCTGAAAGATTCGGATCCTATCATTTAATTAA

mRNA sequence

AAAAGAAAAAAAAAAGAAAAGAAAAAACATCTTCTTCTTTCTCCTTACATCTCTGTTCTTTCAGAAATTCTCTCTCGTCTGTTCGTTCACCCCTGTCTTTTGATTTAAGGAACACCTCTTCTTTTTCCCCTTTTCCACTTCGATTCTTTTACGAATTCCCCTCCTTCACTAGAATCTCGATTTGTATTTTTGTTCAACGATTTGTTTGGTTTCTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGTTCTTCGATTGGTGGCTTAGGGGTTTTAGATTTTTGGTTCTTACATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGCCTTTGGAGTTCAATGGTGTCCTTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGGATGGCGACTTATCGTCAACTGCTTATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGCCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCGTCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCATTCACTGCCCTTTTCCACAACAAACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCGGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTCGGTCATAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCATATTATCAACAACCTAGCACTACAGGAAGCATTCGCCCACCTGCAATTTCTGGTGCCAGAAGATCAAGTAATCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCCGCATCATCGGGTCGTAATTTCCAACTGGAGAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGCGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCGCAAAATTGGTCATAGACCAACCATCATTTACTTACCGATTCCCGGTGAGGCTAAAACTATCACTATGATGACTTGAAACTGAAATTTATGTAATGATTGGGATGATATGTAATGGCCGAGTCTTTGATGTGCCGCTAGACTCTATATGCTGTGAGAGCAGCCGATAAGAAAAAAAACAAGCTCGCTTCGAGTTACCGATATGGTTAGTGTGGTGATGGACTTGGCTTCCTTGAGATTGTCTACCCTGGAGGTTATAGAATAACGTTATGAATCGGATGGGAAAACTAAGATTTGTAGGTAACATCCTTTTCCTGTTTGTGTTCGTGTTGGTGTTCATGTCCCATCCAATTCATAAGGATGTTGGAGTAACTTGGGGTAGCTCGGGAGGGCCAGATTAGTGAATTTGGTAAATTGTATTCTTGCAGTGATAGTTGAAAATATTCAGTGTTTATTTGTAAACAATGAAACGTGGTGGTTTCAGTAATGTATGAGCAGAACAGGACAGGTCAGCTTTTGGTTTTTGACTTCATGAGACTTCATGAGAGTGTTCATAATATATATATATATCTGAAAGATTCGGATCCTATCATTTAATTAA

Coding sequence (CDS)

ATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGCCTTTGGAGTTCAATGGTGTCCTTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGGATGGCGACTTATCGTCAACTGCTTATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGCCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCGTCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCATTCACTGCCCTTTTCCACAACAAACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCGGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTCGGTCATAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCATATTATCAACAACCTAGCACTACAGGAAGCATTCGCCCACCTGCAATTTCTGGTGCCAGAAGATCAAGTAATCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCCGCATCATCGGGTCGTAATTTCCAACTGGAGAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGCGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCGCAAAATTGGTCATAG

Protein sequence

MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFGVQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHPSSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGADQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDRVQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPERASSQNWS

Homology

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BLAST of Cp4.1LG04g00410 vs. ExPASy Swiss-Prot
Match: O82239 (E3 ubiquitin-protein ligase RFI2 OS=Arabidopsis thaliana OX=3702 GN=RFI2 PE=1 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 5.1e-54
Identity = 151/373 (40.48%), Postives = 190/373 (50.94%), Query Frame = 0


Query: 19  GGCGAG------CGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGA 78
           GGC  G         S   V CSICL+ V D G RS AKLQCGHQFHLDCIGSAFN+KGA
Sbjct: 17  GGCDPGKRGNPEDSSSPVEVSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGA 76

Query: 79  MQCPNCRKIEKGQWLYANG-CRSFPDFSMDDWTHEEDLYDLSYSEMAFGVQWCPFGNLAR 138
           MQCPNCR +EKGQWLYANG  R FP+FSM+DW  EEDLY LSY EM + V WCPFG L++
Sbjct: 77  MQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQ 136

Query: 139 LPPSFEDGDLSSTAYH-DLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHPSSSSSSASEA 198
              SFE+ + ++T YH +  G HA    H+          Y+AY GP  P+++  ++   
Sbjct: 137 AAASFEELEPATTTYHTEFHGHHAAAVNHS----------YLAYVGP-GPAATPRTSDNN 196

Query: 199 SNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGADQPTVASVAQ 258
           S     WN          S+  F  + +  Q + HHS  FS     V   +   V S A 
Sbjct: 197 STDDHPWNS--------HSNDHFHQLPVAPQ-YHHHSPSFSLPAAHVVDGE---VDSSAA 256

Query: 259 RSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDRVQALQAYYQQ 318
           R        LP +  HPFL  H S+ R     +S  I  Y GS+ + R++  A     QQ
Sbjct: 257 RG-------LPYA--HPFLFSHRSNQR-----SSPAINSYQGSSTQMREQHHAYNHQRQQ 316

Query: 319 PSTTGSIRPPAISGARRSSNHRGL-SQAPMASSSDQPNGFYFYSSASSGRNFQLENTVPN 378
               G    P ++    S   RGL    P     DQ  GF+ Y     G + + E    +
Sbjct: 317 HHANG----PTLASPLISMTRRGLPPPPPPPPMPDQNVGFFIY----PGGHHEPET---D 341

Query: 379 RFHPWERDHLPSF 383
           + H WERD  P F
Sbjct: 377 QIHAWERDWFPHF 341

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy Swiss-Prot
Match: Q9BWF2 (E3 ubiquitin-protein ligase TRAIP OS=Homo sapiens OX=9606 GN=TRAIP PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04
Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 0


Query: 34  CSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCR 93
           C+IC D  D S  R  A + CGH FHL C+   F    +  CP CR I+ G+    N  +
Sbjct: 7   CTICSDFFDHS--RDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCR-IQVGKRTIIN--K 66

Query: 94  SFPDFSMDDWTHEEDLYDLSY 115
            F D + +    EE++ D  +
Sbjct: 67  LFFDLAQE----EENVLDAEF 78

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy Swiss-Prot
Match: Q8VIG6 (E3 ubiquitin-protein ligase TRAIP OS=Mus musculus OX=10090 GN=Traip PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04
Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 0


Query: 34  CSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCR 93
           C+IC D  D S  R  A + CGH FHL C+   F    +  CP CR I+ G+    N  +
Sbjct: 7   CTICSDFFDHS--RDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCR-IQVGKKTIIN--K 66

Query: 94  SFPDFSMDDWTHEEDLYDLSY 115
            F D + +    EE++ D  +
Sbjct: 67  LFFDLAQE----EENVLDAEF 78

[Close]

BLAST of Cp4.1LG04g00410 vs. NCBI nr
Match: XP_023530252.1 (E3 ubiquitin-protein ligase RFI2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 896 bits (2315), Expect = 0.0
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN
Sbjct: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 428

[Close]

BLAST of Cp4.1LG04g00410 vs. NCBI nr
Match: XP_022928757.1 (E3 ubiquitin-protein ligase RFI2-like [Cucurbita moschata])

HSP 1 Score: 885 bits (2288), Expect = 0.0
Identity = 423/428 (98.83%), Postives = 424/428 (99.07%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGD SSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIR PAISGARRSS+HRGLSQAPMASSSDQPNGFYFYSSASSG N
Sbjct: 301 VQALQAYYQQPSTTGSIRAPAISGARRSSSHRGLSQAPMASSSDQPNGFYFYSSASSGHN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPS RSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSTRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 428

[Close]

BLAST of Cp4.1LG04g00410 vs. NCBI nr
Match: XP_022969703.1 (E3 ubiquitin-protein ligase RFI2-like [Cucurbita maxima])

HSP 1 Score: 885 bits (2287), Expect = 0.0
Identity = 423/428 (98.83%), Postives = 425/428 (99.30%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGD SSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTT+NRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTHNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRSATRV TELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRSATRVSTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIR PAISGARRSS+HRGLSQAPMASSSDQPNGFYFYSSASSGRN
Sbjct: 301 VQALQAYYQQPSTTGSIRAPAISGARRSSSHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 428

[Close]

BLAST of Cp4.1LG04g00410 vs. NCBI nr
Match: KAG6588493.1 (E3 ubiquitin-protein ligase RFI2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 880 bits (2275), Expect = 0.0
Identity = 423/428 (98.83%), Postives = 425/428 (99.30%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGD SSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRS TRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRS-TRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIR PAISGARRSS++RGLSQAPMASSSDQPNGFYFYSSASSGRN
Sbjct: 301 VQALQAYYQQPSTTGSIRAPAISGARRSSSNRGLSQAPMASSSDQPNGFYFYSSASSGRN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 427

[Close]

BLAST of Cp4.1LG04g00410 vs. NCBI nr
Match: XP_008450612.1 (PREDICTED: uncharacterized protein LOC103492151 [Cucumis melo] >KAA0050910.1 uncharacterized protein E6C27_scaffold761G00360 [Cucumis melo var. makuwa] >TYK10261.1 uncharacterized protein E5676_scaffold16G004090 [Cucumis melo var. makuwa])

HSP 1 Score: 810 bits (2093), Expect = 2.89e-295
Identity = 391/431 (90.72%), Postives = 411/431 (95.36%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDD+AVAEDGDYGDGGCGAG GKSFGSVPCSICLDVV DSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGSVPCSICLDVVADSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRK+EKGQWLYANGCRSFPDF+MDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKVEKGQWLYANGCRSFPDFNMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFG+LARLP SFEDGD SSTAYHDLLGQHA+FAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGSLARLPSSFEDGDFSSTAYHDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGP SVPSE+PSSYAFPAVDLHYQNWEHHS PFSTTNNRV GA
Sbjct: 181 SSSSSSASEASNFSGHWNGP-SVPSEIPSSYAFPAVDLHYQNWEHHSPPFSTTNNRVPGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSG--MHPFLVGHSSSARVGSSVASSMIPPYPGSNARAR 300
           DQP+V SVAQR ATRVG+ELPRSG  +HPFLVGHSS ARVGSSVASSMIPPYPGSNARAR
Sbjct: 241 DQPSVPSVAQRPATRVGSELPRSGSVLHPFLVGHSSGARVGSSVASSMIPPYPGSNARAR 300

Query: 301 DRVQALQAYYQQ-PSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASS 360
           DRVQALQAYYQQ PSTTG+IR PAISG RRSSNHRG+SQAPMASSS+QP+GFYFYSSAS+
Sbjct: 301 DRVQALQAYYQQQPSTTGTIRTPAISGGRRSSNHRGISQAPMASSSEQPSGFYFYSSASA 360

Query: 361 GRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRH 420
           GR+FQ ENT+PNRFH WER+HLPSFGL+Q+ERDPGWGEIHQGA SVSDP+IRSSSFRQRH
Sbjct: 361 GRSFQPENTMPNRFHAWEREHLPSFGLSQIERDPGWGEIHQGA-SVSDPNIRSSSFRQRH 420

Query: 421 GPERASSQNWS 428
           G ER SSQNWS
Sbjct: 421 GSERTSSQNWS 429

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL
Match: A0A6J1EKU2 (E3 ubiquitin-protein ligase RFI2-like OS=Cucurbita moschata OX=3662 GN=LOC111435581 PE=4 SV=1)

HSP 1 Score: 885 bits (2288), Expect = 0.0
Identity = 423/428 (98.83%), Postives = 424/428 (99.07%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGD SSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIR PAISGARRSS+HRGLSQAPMASSSDQPNGFYFYSSASSG N
Sbjct: 301 VQALQAYYQQPSTTGSIRAPAISGARRSSSHRGLSQAPMASSSDQPNGFYFYSSASSGHN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPS RSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSTRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 428

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL
Match: A0A6J1I1R9 (E3 ubiquitin-protein ligase RFI2-like OS=Cucurbita maxima OX=3661 GN=LOC111468688 PE=4 SV=1)

HSP 1 Score: 885 bits (2287), Expect = 0.0
Identity = 423/428 (98.83%), Postives = 425/428 (99.30%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFGNLARLPPSFEDGD SSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTT+NRVAGA
Sbjct: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTHNRVAGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300
           DQPTVASVAQRSATRV TELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR
Sbjct: 241 DQPTVASVAQRSATRVSTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDR 300

Query: 301 VQALQAYYQQPSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360
           VQALQAYYQQPSTTGSIR PAISGARRSS+HRGLSQAPMASSSDQPNGFYFYSSASSGRN
Sbjct: 301 VQALQAYYQQPSTTGSIRAPAISGARRSSSHRGLSQAPMASSSDQPNGFYFYSSASSGRN 360

Query: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420
           FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE
Sbjct: 361 FQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPE 420

Query: 421 RASSQNWS 428
           RASSQNWS
Sbjct: 421 RASSQNWS 428

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL
Match: A0A5A7U6U7 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004090 PE=4 SV=1)

HSP 1 Score: 810 bits (2093), Expect = 1.40e-295
Identity = 391/431 (90.72%), Postives = 411/431 (95.36%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDD+AVAEDGDYGDGGCGAG GKSFGSVPCSICLDVV DSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGSVPCSICLDVVADSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRK+EKGQWLYANGCRSFPDF+MDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKVEKGQWLYANGCRSFPDFNMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFG+LARLP SFEDGD SSTAYHDLLGQHA+FAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGSLARLPSSFEDGDFSSTAYHDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGP SVPSE+PSSYAFPAVDLHYQNWEHHS PFSTTNNRV GA
Sbjct: 181 SSSSSSASEASNFSGHWNGP-SVPSEIPSSYAFPAVDLHYQNWEHHSPPFSTTNNRVPGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSG--MHPFLVGHSSSARVGSSVASSMIPPYPGSNARAR 300
           DQP+V SVAQR ATRVG+ELPRSG  +HPFLVGHSS ARVGSSVASSMIPPYPGSNARAR
Sbjct: 241 DQPSVPSVAQRPATRVGSELPRSGSVLHPFLVGHSSGARVGSSVASSMIPPYPGSNARAR 300

Query: 301 DRVQALQAYYQQ-PSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASS 360
           DRVQALQAYYQQ PSTTG+IR PAISG RRSSNHRG+SQAPMASSS+QP+GFYFYSSAS+
Sbjct: 301 DRVQALQAYYQQQPSTTGTIRTPAISGGRRSSNHRGISQAPMASSSEQPSGFYFYSSASA 360

Query: 361 GRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRH 420
           GR+FQ ENT+PNRFH WER+HLPSFGL+Q+ERDPGWGEIHQGA SVSDP+IRSSSFRQRH
Sbjct: 361 GRSFQPENTMPNRFHAWEREHLPSFGLSQIERDPGWGEIHQGA-SVSDPNIRSSSFRQRH 420

Query: 421 GPERASSQNWS 428
           G ER SSQNWS
Sbjct: 421 GSERTSSQNWS 429

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL
Match: A0A1S3BNZ2 (uncharacterized protein LOC103492151 OS=Cucumis melo OX=3656 GN=LOC103492151 PE=4 SV=1)

HSP 1 Score: 810 bits (2093), Expect = 1.40e-295
Identity = 391/431 (90.72%), Postives = 411/431 (95.36%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDD+AVAEDGDYGDGGCGAG GKSFGSVPCSICLDVV DSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGSVPCSICLDVVADSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRK+EKGQWLYANGCRSFPDF+MDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKVEKGQWLYANGCRSFPDFNMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFG+LARLP SFEDGD SSTAYHDLLGQHA+FAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGSLARLPSSFEDGDFSSTAYHDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGP SVPSE+PSSYAFPAVDLHYQNWEHHS PFSTTNNRV GA
Sbjct: 181 SSSSSSASEASNFSGHWNGP-SVPSEIPSSYAFPAVDLHYQNWEHHSPPFSTTNNRVPGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSG--MHPFLVGHSSSARVGSSVASSMIPPYPGSNARAR 300
           DQP+V SVAQR ATRVG+ELPRSG  +HPFLVGHSS ARVGSSVASSMIPPYPGSNARAR
Sbjct: 241 DQPSVPSVAQRPATRVGSELPRSGSVLHPFLVGHSSGARVGSSVASSMIPPYPGSNARAR 300

Query: 301 DRVQALQAYYQQ-PSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASS 360
           DRVQALQAYYQQ PSTTG+IR PAISG RRSSNHRG+SQAPMASSS+QP+GFYFYSSAS+
Sbjct: 301 DRVQALQAYYQQQPSTTGTIRTPAISGGRRSSNHRGISQAPMASSSEQPSGFYFYSSASA 360

Query: 361 GRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRH 420
           GR+FQ ENT+PNRFH WER+HLPSFGL+Q+ERDPGWGEIHQGA SVSDP+IRSSSFRQRH
Sbjct: 361 GRSFQPENTMPNRFHAWEREHLPSFGLSQIERDPGWGEIHQGA-SVSDPNIRSSSFRQRH 420

Query: 421 GPERASSQNWS 428
           G ER SSQNWS
Sbjct: 421 GSERTSSQNWS 429

[Close]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL
Match: A0A0A0LVZ9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569320 PE=4 SV=1)

HSP 1 Score: 803 bits (2075), Expect = 7.75e-293
Identity = 388/431 (90.02%), Postives = 408/431 (94.66%), Query Frame = 0


Query: 1   MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHL 60
           MGLGNDD+AVAEDGDYGD GC AG GKSFGSVPCSICLDVV DSGDRSWAKLQCGHQFHL
Sbjct: 1   MGLGNDDDAVAEDGDYGDAGCAAGGGKSFGSVPCSICLDVVADSGDRSWAKLQCGHQFHL 60

Query: 61  DCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFG 120
           DCIGSAFNIKGAMQCPNCRK+EKGQWLYANGCRSFPDF+MDDWTHEEDLYDLSYSEMAFG
Sbjct: 61  DCIGSAFNIKGAMQCPNCRKVEKGQWLYANGCRSFPDFNMDDWTHEEDLYDLSYSEMAFG 120

Query: 121 VQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHP 180
           VQWCPFG+LARLP SFEDGD SSTAYHDLLGQHA+FAEHTAVSSATHPCPYIAYFGPIHP
Sbjct: 121 VQWCPFGSLARLPSSFEDGDFSSTAYHDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHP 180

Query: 181 SSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGA 240
           SSSSSSASEASNFSGHWNGP SVPSE+PSSYAFPAVDLHYQNWEHHS PFSTTNNRV GA
Sbjct: 181 SSSSSSASEASNFSGHWNGP-SVPSEIPSSYAFPAVDLHYQNWEHHSPPFSTTNNRVPGA 240

Query: 241 DQPTVASVAQRSATRVGTELPRSG--MHPFLVGHSSSARVGSSVASSMIPPYPGSNARAR 300
           DQP+V SVAQR ATRVG+ELPRSG  +HPFLVGHSS ARVGSSVASSMIPPYPGSNARAR
Sbjct: 241 DQPSVPSVAQRPATRVGSELPRSGSVLHPFLVGHSSGARVGSSVASSMIPPYPGSNARAR 300

Query: 301 DRVQALQAYYQQ-PSTTGSIRPPAISGARRSSNHRGLSQAPMASSSDQPNGFYFYSSASS 360
           DRVQALQAYYQQ PSTTG+IR PAISG RRSSNHRGLSQAPMASSS+QP+GFYFYSSAS+
Sbjct: 301 DRVQALQAYYQQQPSTTGTIRTPAISGGRRSSNHRGLSQAPMASSSEQPSGFYFYSSASA 360

Query: 361 GRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRH 420
           GR+FQ EN +PNRFH WER+HLPSFGL+Q++RDPGWGEIHQGA SVSDP+IRSSSFRQRH
Sbjct: 361 GRSFQPENAMPNRFHAWEREHLPSFGLSQIDRDPGWGEIHQGA-SVSDPNIRSSSFRQRH 420

Query: 421 GPERASSQNWS 428
           G ER SSQNWS
Sbjct: 421 GSERTSSQNWS 429

[Close]

BLAST of Cp4.1LG04g00410 vs. TAIR 10
Match: AT3G05545.1 (RING/U-box superfamily protein )

HSP 1 Score: 375.2 bits (962), Expect = 7.2e-104
Identity = 226/464 (48.71%), Postives = 271/464 (58.41%), Query Frame = 0


Query: 1   MGLGND------------DEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRS 60
           MGLGN             DEA   DGD GDG         FGSV CSICL+ V  +GDR+
Sbjct: 1   MGLGNKGNKFNFGDNDLADEASGADGDEGDG---------FGSVACSICLETVVKNGDRA 60

Query: 61  WAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEED 120
           WA LQC HQFHLDCIGSAFN KG MQCPNCRK+EKGQWLYANGCRS+P+F+++DW HEED
Sbjct: 61  WANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEED 120

Query: 121 LYDL-SYSEMAFGVQWCPFGNLARLPPSFEDGDLSSTAYHDLLGQHAVFAEHTAVSSATH 180
           +YD+ +YSEM+FGV WCPFG+ ARL PSFEDG+ S ++YHDLLGQ   + E  A  +A H
Sbjct: 121 IYDIGAYSEMSFGVHWCPFGSSARL-PSFEDGEFSPSSYHDLLGQQGYYTE-PAAPTAGH 180

Query: 181 PCPYIAYFGPIH-PSSSSSSA---SEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNW 240
           PCPY+ YFGP+H PSSSS  A   S++S+FS HWN   SV  EVP+ Y FP VD HY  W
Sbjct: 181 PCPYVTYFGPVHSPSSSSGGAAGVSDSSSFSSHWNTGSSVSGEVPTPYGFP-VDPHYHGW 240

Query: 241 EHHSLP------FSTTNNRVAGADQPTVASVAQRSATRVGTEL----PRSGMHPFLVGHS 300
           ++H  P      FS +   V    QPT    A R++   G+++    P     PF  GHS
Sbjct: 241 DYHPPPPPPPQHFSASGAHVGSPTQPTPPPAAARTSRANGSDMIRPRPPHFTRPF-HGHS 300

Query: 301 SSARVGSSVAS-SMIPPYPGSNARARDRVQALQAYYQ-------QPSTTGSIRPPAISGA 360
           SS R GSSVAS    PP+PGSNAR RDR+QALQAYYQ       QP +    R P     
Sbjct: 301 SSGRAGSSVASVPRTPPFPGSNARTRDRMQALQAYYQQSSAQSHQPDSPIVSRGPVFPSG 360

Query: 361 RRSSNHRGLSQAPMASSSDQPNGFYFYSSASSGRNFQLENTVPNRFHPWERD----HLPS 420
           RR +          +SSSDQ  G  F                  RF+ WERD       +
Sbjct: 361 RRPARGIASGMGSTSSSSDQAGGSGFI-----------------RFNIWERDPYMQSQQA 420

Query: 421 FGLNQMERDPG-WGEIHQGAASVSDPSIRSSSFRQRHGPERASS 425
           + +NQM+R+P  W          S  +  S SF QRHG    SS
Sbjct: 421 YSVNQMDREPNIW---------TSSFNEGSGSFHQRHGGGGGSS 425

[Close]

BLAST of Cp4.1LG04g00410 vs. TAIR 10
Match: AT2G47700.1 (RING/U-box superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-55
Identity = 151/373 (40.48%), Postives = 190/373 (50.94%), Query Frame = 0


Query: 19  GGCGAG------CGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGA 78
           GGC  G         S   V CSICL+ V D G RS AKLQCGHQFHLDCIGSAFN+KGA
Sbjct: 17  GGCDPGKRGNPEDSSSPVEVSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGA 76

Query: 79  MQCPNCRKIEKGQWLYANG-CRSFPDFSMDDWTHEEDLYDLSYSEMAFGVQWCPFGNLAR 138
           MQCPNCR +EKGQWLYANG  R FP+FSM+DW  EEDLY LSY EM + V WCPFG L++
Sbjct: 77  MQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQ 136

Query: 139 LPPSFEDGDLSSTAYH-DLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHPSSSSSSASEA 198
              SFE+ + ++T YH +  G HA    H+          Y+AY GP  P+++  ++   
Sbjct: 137 AAASFEELEPATTTYHTEFHGHHAAAVNHS----------YLAYVGP-GPAATPRTSDNN 196

Query: 199 SNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTNNRVAGADQPTVASVAQ 258
           S     WN          S+  F  + +  Q + HHS  FS     V   +   V S A 
Sbjct: 197 STDDHPWNS--------HSNDHFHQLPVAPQ-YHHHSPSFSLPAAHVVDGE---VDSSAA 256

Query: 259 RSATRVGTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDRVQALQAYYQQ 318
           R        LP +  HPFL  H S+ R     +S  I  Y GS+ + R++  A     QQ
Sbjct: 257 RG-------LPYA--HPFLFSHRSNQR-----SSPAINSYQGSSTQMREQHHAYNHQRQQ 316

Query: 319 PSTTGSIRPPAISGARRSSNHRGL-SQAPMASSSDQPNGFYFYSSASSGRNFQLENTVPN 378
               G    P ++    S   RGL    P     DQ  GF+ Y     G + + E    +
Sbjct: 317 HHANG----PTLASPLISMTRRGLPPPPPPPPMPDQNVGFFIY----PGGHHEPET---D 341

Query: 379 RFHPWERDHLPSF 383
           + H WERD  P F
Sbjct: 377 QIHAWERDWFPHF 341

[Close]

BLAST of Cp4.1LG04g00410 vs. TAIR 10
Match: AT2G15260.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 9.3e-19
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 34  CSICLDVVDDSGD--RSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG 93
           CSIC   + +  D  R+   L+C H+FHLDCIGSA+N KG M+CPNCR IE G W +++G
Sbjct: 123 CSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCRNIEPGHWQFSDG 182

Query: 94  CRSFPD-FSMDDWTHEEDLYDLSYSEMAFGVQWCPFGNLARLPP 135
               P+    ++   EED    S+S+M    + CPFG L +  P
Sbjct: 183 THFNPNGMIANNEEEEEDNDPGSFSQMIVKSEVCPFGCLGQRYP 226

[Close]

BLAST of Cp4.1LG04g00410 vs. TAIR 10
Match: AT4G13490.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 6.6e-17
Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 29 FGSVPCSICLD-VVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWL 88
          F    C++CL+ + +D+ +R+  KL+C H+FHLDC+GS+FNIK  M+CP CR+IEKG+WL
Sbjct: 17 FDDDDCAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQIEKGKWL 76

Query: 89 YA 90
          +A
Sbjct: 77 FA 78

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82239	5.1e-54	40.48	E3 ubiquitin-protein ligase RFI2 OS=Arabidopsis thaliana OX=3702 GN=RFI2 PE=1 SV...	[more]
Q9BWF2	2.2e-04	34.57	E3 ubiquitin-protein ligase TRAIP OS=Homo sapiens OX=9606 GN=TRAIP PE=1 SV=1	[more]
Q8VIG6	2.2e-04	34.57	E3 ubiquitin-protein ligase TRAIP OS=Mus musculus OX=10090 GN=Traip PE=1 SV=2	[more]

BLAST of Cp4.1LG04g00410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530252.1	0.0	100.00	E3 ubiquitin-protein ligase RFI2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928757.1	0.0	98.83	E3 ubiquitin-protein ligase RFI2-like [Cucurbita moschata]	[more]
XP_022969703.1	0.0	98.83	E3 ubiquitin-protein ligase RFI2-like [Cucurbita maxima]	[more]
KAG6588493.1	0.0	98.83	E3 ubiquitin-protein ligase RFI2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_008450612.1	2.89e-295	90.72	PREDICTED: uncharacterized protein LOC103492151 [Cucumis melo] >KAA0050910.1 unc...	[more]

BLAST of Cp4.1LG04g00410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKU2	0.0	98.83	E3 ubiquitin-protein ligase RFI2-like OS=Cucurbita moschata OX=3662 GN=LOC111435...	[more]
A0A6J1I1R9	0.0	98.83	E3 ubiquitin-protein ligase RFI2-like OS=Cucurbita maxima OX=3661 GN=LOC11146868...	[more]
A0A5A7U6U7	1.40e-295	90.72	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BNZ2	1.40e-295	90.72	uncharacterized protein LOC103492151 OS=Cucumis melo OX=3656 GN=LOC103492151 PE=...	[more]
A0A0A0LVZ9	7.75e-293	90.02	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569320 P...	[more]

BLAST of Cp4.1LG04g00410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05545.1	7.2e-104	48.71	RING/U-box superfamily protein	[more]
AT2G47700.1	3.6e-55	40.48	RING/U-box superfamily protein	[more]
AT2G15260.1	9.3e-19	43.27	RING/U-box superfamily protein	[more]
AT4G13490.1	6.6e-17	53.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 34..78 e-value: 4.2E-7 score: 39.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 34..79 e-value: 4.5E-8 score: 33.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 34..79 score: 12.179465
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 30..88 e-value: 1.2E-11 score: 45.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 382..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..346
None	No IPR available	PANTHER	PTHR46798:SF9	SUBFAMILY NOT NAMED	coord: 1..427
None	No IPR available	CDD	cd16448	RING-H2	coord: 34..79 e-value: 2.41422E-9 score: 50.9135
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 33..81
IPR044274	E3 ubiquitin-protein ligase RFI2	PANTHER	PTHR46798	OS09G0511500 PROTEIN	coord: 1..427

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00410.1	Cp4.1LG04g00410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity