Cp4.1LG04g00230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g00230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pre-mRNA-splicing factor CWC22 homolog
Location	Cp4.1LG04: 1929372 .. 1936187 (+)
RNA-Seq Expression	Cp4.1LG04g00230
Synteny	Cp4.1LG04g00230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCTTAGCAGTTGCCACCTCATTCTCTCACCGTCATCAACCTTTCGTTCGAGGAAGCACGAGGGCGATGCAACCGGATCCGTGCTAGTCTAGTGTTTGGCGGCTAATCCCTTCTTGCAGCGGCGACATCTCAAGATCTGGTGAACCCAGGGACTCACGAATCGACGGCGACTCGTCTCCAACTTCAGCGGTGTATCGGAATCGTCTCTTTAAAGGCAGCTGTCCAATATTACCCACGAACTAGCGACGTAGTTCGCGACGGCCCTCTCTCTTCGGCGGCAGTGTAGCGGCGGCGTCGTCGTAATCCTCTTTTCCAGCGGCATTTTTGGAGATCGAGTTATTCTTAGAGGTTTAATGAAGTCGAATGTTTTACTTTTATATAAGATTCGTTTATTCTAGGCGTTTCAAGTAGTATTTGGTTCGTCGTTTTTGATTGAAAAATGTTATCATTTTCTCATTTCTTGAGTAAAGACTGGAGTTATTTTGGATTAATTGATCTTGTTGTCTGACCTGAGTTTAATCAAGCAAGGAAGTCTAGTAATGTTCCTTAAATTAAAATAAAATTTGGGGCCGTTTGAACGCATTTCCGATTTGTCTCTTTACATATCTTAATTTCGGTGGTGCAAGGTATTTGCCGCTGTAGTTCTAGTTCTAATTCAGTTTGTTTCGGCGTTAATCCTGGTGGTGGGATGTAGCTTCACTATTCGATTCTGCTGTCCAATTTATGAAGAAGGGCCACAGTGGCTTTTTTGGGTGCTTCGAATGAGGGCGTGGGTGGTAGGCGAATAGGTCATTTATAAACTATTGTCTACTTCTCTTATGATATGCATCTTTCCTGGAGATCTTTCTAAAGAGCCTTCCTGCTTGTCATTACCAATTTTCTTCTGGCAATTTTGGATGTTAGGTTGGTGCTCAATAAAAATTTGTGCTTTTGAGTAATATTCATTCTTCTGCAGCGCTGGTATGGACAGTAAGTACAGCAGAGAGTTGTCAGATGAGGATGAAGTGAAAAAGAAAACAGATAGACACCGCCATAGTTGTAGGAAAAGAGATATCGGACAGCGTGGTTGTCGTGAAGATGATAGTGATTCTAATGATGCCAAGGAAGAATATGGGAGTAGATGGCATGAGTCGAAAGATGCGTACAGTGATGAAGATCAGACTAAAGTAAGAATTAGTGAGAAAAATGATGGCCACATACATGAACGGTGGCAAAGTGAAGATGGCAGAAAGAATGCATCTAGACAAAGTCCTGGTGAAGGTTACGAGAGAATAGACAGAGACAGAAACAGGCATGATAGATACGAAAGGCGTCAAGGTGACAATAAGCGTAGAGAACCAGAGAGAGGAGACCAGAAAGAACCCCTTCAAAATATAGATAAGGATGAGCAGAGAATGGGCAGAGATAAAAACAGGCACAATAGAAATAGAATGCATCATAATGAAAATCAGCAGAGAGAACAAGAGAGAGTAGACCGGAAAGAATCATACCGAAGTTCTGATGAAAATGAGCAGCGAGATGATAAAGACAAAGACAAAAAAAAGCACGATAGAGATAGAAGGCATCAAGGTAAAAATCTGCAAGAAGATAGAGGAGATAGGAACGAATCATATCGAAGTTTTGGTGAAAATGAAGAGAGAATGGACAGAGACAAAAACAGACATGATAGAGACAGAAGGCCTCGTGGTGAAAATCGGCATAATAGAGAACAAGAGAGAGGAGACCGGAAAAAGTCTTATACAAGTTCTGATGAAGACGAGCGGCAAGAAAGGAGGCATGACCATAGACGACGTGAATCTGAGAATGGAAATAAAAATGTGGATCGCCATTTGCACCATGATTCAAAAGATGAGCGTGTCAAGGCATTGCATAGAAAATCAGAACATGGCAGGAATTGGATTGACAATGATAGGGAGAAGAAGCATTCAAAACATGATTACAAGTATAGAAATTCTCAAGATCTACGTGATAAGGAGGCGAATGAACAGAGAGAGGATCGTAGAAACATTGGGGATAAAGAAAAGGCTGGCACGCGGACTCTTGACCATCCACAACCTCACAGACAAGAAAAACAGTCTGAGAACAATTTGAATTCCGATGCTTTAAATCTGGGTAAGAGTGGTGGGGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGGAAAAGTATCAACGGACTTGTCAACAAGGTCAATGCTACTAACATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACCTGATCAGGGGCAGGGGTTTATTCTGCCGTTCCTGTATGAAGTCACAAATGGCATCTCCAGGGTTCACCGATGTATTTGCTGCACTGGTTTCTGTTGTAAATACTAAGTTTCCAGAAGTGGGCGATCTTCTTTTGAGAAGAATTGTCTTGCAACTCAAAAGAGCATATAAACGGAATGATAAGGTAGAGGATTGCATGACATTTGTAGTTTATATTAGTTTTTCCCTCTGGCTTCTGCAAGATCTTCCTTTTTAAAATTTCTGCTAATCCTCTTTGCGTTTGTTTATCTTTGACAGCCTCAACTACTAGCTGCTGTAAAATTTATAGCACATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAACTACTCACTGTGTTGCTGGAGAATCCTACGGATGACAGTGTGGAGGTGGCTGTTGGTTTTGTAACTGAGTGTGGATCAATACTACAGGATTTTTCTCCTAAAGGGCTTCATGGTCAGTGTTCAATCATGTTAATTCATTAGTTGACATTTTAGCTTCTTGACGTTGGTTGGAGAAAGAAGATATTATCTGGATAGAAGTTTTAGTAAAAATATTTCTAGTTTAAGGCTTTTATTTGTAAAATATTTTCACTGTAGGCAGGGAAATAATACACATGCCAAAAACTAAGGGAACTAAAGTAGTCTATCGGGTGTTTCTATCTAGACCCAGAAAGGAGTATATGCACCTTGAAATGGCTTTATTTTGAATCTCTGATATTCGTTGTGTGCAATCACCATGGTCACTGATTTTTATTTTCATGGATCTGTCATGAAATTATCATCGTCTATCCATGCTCATTCTGTTTGGGTTTCTTGAAAAGCTTATACCTTCTACAAAAGATAACGAACTTTCATGTTACTTCCAATTTTTGCTTTAAGCCCGCTCTTACTGGAGATTAGTTTTTTAATATTTTCTACATTTCTTATCATGAGAAAAATAAAATTGTTATATTCTTTTTCTTTATAACTCAAGGATATTGTTGTTCACCCTATAGGATAGATTAGGTCACTTCATTTATTTTATTAGTTTTTTTGAAAATATAATTCCTCATGTCATCCACATTTATATTACACCAAGATTGTTTATTCACTTTTCTTTATTTCATACTCATTGATTGTAGGAATATTTGAGCGGTTTCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCAATAAGGAAAGCGAAGTTTGAGGTATAGTCATTTTTTGTTTTATCTCTTCCCCATATTTAATTTTTTTTTTTTTTTTTTGGAAGTTAGAGTCTTGAGATGTAATGATTGTATTGGGAGTTCACAAAACTTTTGAAGATTTAGGATATCCAGTTATTTTTGTTGTTATCATTAGTTTTTAGGGATGAATTAGATGTAATTCTCACTATGAAATGAAGTTTTAAATAATTTATTGTTTTAGTAATGAATAACTTCAATGCACCATTCCCCATGAAAGTTGGTTTCTATATTTAAAAGAAAATGTACAGCGGCTGGTTAGTTTCTTTGTCTTTTCTTTGGTGTAAAACGTGTGTGAAGTAAATTGTACTTATAGTTCTTCTTCCCCCCCCCCAATTTTAGAATCTAGTTGTTTCTTTCATGTTATACCAACGTCGTGTGACTTTTGATTTCCGAATTGCACCTCTTGCAATGTACCCAAAATATCCTTCCCGGAAGTATTCCTAGTTGTCTGTTTCCAAGCATACATATCTCTACCTTCCTTGTATAGCCGCAACGATATTTTACTTCTTTTTTTTGTTTTCTCCGTTTGGATTTGATTCAGGGCTATCCAGCTGTTCGTCCAGAATTGGACCTTGTGGAGCAAGAAGATCAGTTAACTCATGAAATTTCCCTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGGTATCTCTTTTTACATGGTCTATTAATTAATCAAACTGGGTGTTCTCATGATGTTTGTTTTATTCATTCATTTATATATTTTCCTGACCTGGTTTCAGATATCTTCAAATCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCTGAGGATGAAGAAGACCGATCTGATGCTGGATCGGATGATGAAGAGGATGAGGATGAGGAAAATGATTCTGAAGAAGATGAGGAGCAGATGCAAATAAATGATGAAACAGAGACTAATCTTGTGAACCTCAGAAGGACAATTTATCTGACAATTATGTCCAGTGTGGACTTTGAGGAGGCTGGGCATAAGCTTTTAAAAATTAAACTCGAGCCTGGTCAAGAAGTAAGCTCTATAAGCTTTTCCTGTTACTAACATTTTTTGCATACAATTTAACAGGCTTTCCGCACTCTTTCTGAAAGTCAAATTGGTTTCCTGTTTTTTTTTTAATTACTTTTTTTGGTAAGAAATCAAGCTTTTATTGAAAAAGATAAAATATATATCCAAGTAAACAAAAAACAAGTCCAACAAAAAAGACATCCCAAAATAGCTACAGAAAGAGACTCCAATCCAACAAAATCGAGGCAATATCATAATTACGAAAAGGCCTAGAAACGGACTCCCACAAGGTGGTAGTAACCACCTCTGAAACGTGATGGCTTCATATTTCTAAATATCCTATTGTTCCTCTGAATCCAAACCTTCCCCAAAATAGCTAGAAGTTCTATAATAATGACTTGTAATCTTGATGTTTGTTTGTGATCATTCTATGTTGTGTTGTTGATATATTATACAAATGGTACAAATGGTACAAATGTGGGTGAGTTCATCTGTTTGCTATGATATTTGCAGATAGAATTGTGCGTCATGTTGTTGGAATGTTGCAGTCAGGAAAGAACTTACCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGTAAGATCAACAAAGTGCATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAGTACTCGATGATTCATAGGCTTGAAACTAATAAGCTCAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTTCCATGGCATGTCTTGTCTTACATTCGATTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAGATCCTTTTCCAGGTATTTCCACTCTATCTTAAATGTTATCTATATGATTATGTTTTCATTAATCGTTAATGTTGCTATTATTTAGGATAGGGAATTCTGCCGTTGAACGTATTGTTTGTCAAATAGCAAAGCTTTTTATTTTTCTCTTGTCATGGTTGATGGTACGTCCATAGAATTGTTTGGTAATGAATGAAACAGCATCCTTTCCATTGTGTCTACTTGGTTACTATCATGCCGAACCCTCTGCACGAGTCCTTTTTATATAACTCATCCCATATTTGTGGAATTGATATTCTGCATGTAACACAACTTTGTATCAAGTCATTACTGATGTAATTCTCGACGAGATGGTGTAAAAGAATGCATTCTTCTTATCCCCCTGAAAAAAAGGCATCTTGAGTCAACAATTGCGGGATGGAAGGAATGCTAATAAATATCTTATTTACTAAGATATGTTCGGATCGACTTGCATTCTTGTTAATGAATGTTTCTGTAACTAGTCCAAATGAGAATACAAGTGATGCATGCATGATCTTGTGCTAATTATCATTCATTTCTCATTAATAACCATACAAATGCTACTTCTTTTTCCAAAATATGATGGTAGCGACCGTGTAGAAGTTAGCAGTAGGTGCTGGAAGTGAGAAGAATGCTTTGGAAGATGTTAATTTTTGTATCTTGGTGTTATGTGATACAGGAACTTTCAGAGCATTTGGGCATTCGACTATTGAACGAACGTCTCAATGACCCGACAATGCAGGATTCGTTTGAATCTATTTTCCCCAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTCTGACTGAGAATTTGCGAGAGTATTTGAAGAATATGCCACGGCTAATCATGCAACAACAAAAACCAGTGTCGGACTCCGATGAGGAATCTGGAAGTTCTGATTCGTCGGGTTCAGATTCAAGTACTTCACAGTCGGAATCAGATTCGTCAAGCTCCAAGGAAAGTGAAGGCGAAGATAGGAGGCGTGGAAAAAAGAGGAGGAAAACAGGAAGGTGATAGGTTTGTATATTTTCTCCATTTGCTCTTGCTGGATGTTTATTATAACCTTTTATTTAATTGTTTCTTTGATGAAATTTTACCTCTCTAAGGTTAGATTAATGAAGGAGGTGCTTAAACTGAAGGCAATGGTAAGGTCGCCATTGTTGGGACTGAACAATAACACTTTTGTTTACTATTTTTTGAAAAGTATCGTATCCGGGAGGTGGTGGTGTTCACGATGTCTTGAATAAAGTAGAGATGCCCCAGCCCAATATTGGGCAATCTTTTATATCATTATTGCAGTCAATGAGAATCTGAAAATTCCTTC

mRNA sequence

AAAGCTTAGCAGTTGCCACCTCATTCTCTCACCGTCATCAACCTTTCGTTCGAGGAAGCACGAGGGCGATGCAACCGGATCCGTGCTAGTCTAGTGTTTGGCGGCTAATCCCTTCTTGCAGCGGCGACATCTCAAGATCTGGTGAACCCAGGGACTCACGAATCGACGGCGACTCGTCTCCAACTTCAGCGGTGTATCGGAATCGTCTCTTTAAAGGCAGCTGTCCAATATTACCCACGAACTAGCGACGTAGTTCGCGACGGCCCTCTCTCTTCGGCGGCAGTGTAGCGGCGGCGTCGTCGTAATCCTCTTTTCCAGCGGCATTTTTGGAGATCGAGTTATTCTTAGAGGTATTTGCCGCTGTAGTTCTAGTTCTAATTCAGTTTGTTTCGGCGTTAATCCTGGTGGTGGGATGTAGCTTCACTATTCGATTCTGCTGTCCAATTTATGAAGAAGGGCCACAGTGGCTTTTTTGGGTGCTTCGAATGAGGGCGTGGGTGCGCTGGTATGGACAGTAAGTACAGCAGAGAGTTGTCAGATGAGGATGAAGTGAAAAAGAAAACAGATAGACACCGCCATAGTTGTAGGAAAAGAGATATCGGACAGCGTGGTTGTCGTGAAGATGATAGTGATTCTAATGATGCCAAGGAAGAATATGGGAGTAGATGGCATGAGTCGAAAGATGCGTACAGTGATGAAGATCAGACTAAAGTAAGAATTAGTGAGAAAAATGATGGCCACATACATGAACGGTGGCAAAGTGAAGATGGCAGAAAGAATGCATCTAGACAAAGTCCTGGTGAAGGTTACGAGAGAATAGACAGAGACAGAAACAGGCATGATAGATACGAAAGGCGTCAAGGTGACAATAAGCGTAGAGAACCAGAGAGAGGAGACCAGAAAGAACCCCTTCAAAATATAGATAAGGATGAGCAGAGAATGGGCAGAGATAAAAACAGGCACAATAGAAATAGAATGCATCATAATGAAAATCAGCAGAGAGAACAAGAGAGAGTAGACCGGAAAGAATCATACCGAAGTTCTGATGAAAATGAGCAGCGAGATGATAAAGACAAAGACAAAAAAAAGCACGATAGAGATAGAAGGCATCAAGGTAAAAATCTGCAAGAAGATAGAGGAGATAGGAACGAATCATATCGAAGTTTTGGTGAAAATGAAGAGAGAATGGACAGAGACAAAAACAGACATGATAGAGACAGAAGGCCTCGTGGTGAAAATCGGCATAATAGAGAACAAGAGAGAGGAGACCGGAAAAAGTCTTATACAAGTTCTGATGAAGACGAGCGGCAAGAAAGGAGGCATGACCATAGACGACGTGAATCTGAGAATGGAAATAAAAATGTGGATCGCCATTTGCACCATGATTCAAAAGATGAGCGTGTCAAGGCATTGCATAGAAAATCAGAACATGGCAGGAATTGGATTGACAATGATAGGGAGAAGAAGCATTCAAAACATGATTACAAGTATAGAAATTCTCAAGATCTACGTGATAAGGAGGCGAATGAACAGAGAGAGGATCGTAGAAACATTGGGGATAAAGAAAAGGCTGGCACGCGGACTCTTGACCATCCACAACCTCACAGACAAGAAAAACAGTCTGAGAACAATTTGAATTCCGATGCTTTAAATCTGGGTAAGAGTGGTGGGGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGGAAAAGTATCAACGGACTTGTCAACAAGGTCAATGCTACTAACATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACCTGATCAGGGGCAGGGGTTTATTCTGCCGTTCCTGTATGAAGTCACAAATGGCATCTCCAGGGTTCACCGATGTATTTGCTGCACTGGTTTCTGTTGTAAATACTAAGTTTCCAGAAGTGGGCGATCTTCTTTTGAGAAGAATTGTCTTGCAACTCAAAAGAGCATATAAACGGAATGATAAGCCTCAACTACTAGCTGCTGTAAAATTTATAGCACATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAACTACTCACTGTGTTGCTGGAGAATCCTACGGATGACAGTGTGGAGGTGGCTGTTGGTTTTGTAACTGAGTGTGGATCAATACTACAGGATTTTTCTCCTAAAGGGCTTCATGGAATATTTGAGCGGTTTCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCAATAAGGAAAGCGAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAATTGGACCTTGTGGAGCAAGAAGATCAGTTAACTCATGAAATTTCCCTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAATCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCTGAGGATGAAGAAGACCGATCTGATGCTGGATCGGATGATGAAGAGGATGAGGATGAGGAAAATGATTCTGAAGAAGATGAGGAGCAGATGCAAATAAATGATGAAACAGAGACTAATCTTGTGAACCTCAGAAGGACAATTTATCTGACAATTATGTCCAGTGTGGACTTTGAGGAGGCTGGGCATAAGCTTTTAAAAATTAAACTCGAGCCTGGTCAAGAAATAGAATTGTGCGTCATGTTGTTGGAATGTTGCAGTCAGGAAAGAACTTACCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGTAAGATCAACAAAGTGCATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAGTACTCGATGATTCATAGGCTTGAAACTAATAAGCTCAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTTCCATGGCATGTCTTGTCTTACATTCGATTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAGATCCTTTTCCAGGAACTTTCAGAGCATTTGGGCATTCGACTATTGAACGAACGTCTCAATGACCCGACAATGCAGGATTCGTTTGAATCTATTTTCCCCAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTCTGACTGAGAATTTGCGAGAGTATTTGAAGAATATGCCACGGCTAATCATGCAACAACAAAAACCAGTGTCGGACTCCGATGAGGAATCTGGAAGTTCTGATTCGTCGGGTTCAGATTCAAGTACTTCACAGTCGGAATCAGATTCGTCAAGCTCCAAGGAAAGTGAAGGCGAAGATAGGAGGCGTGGAAAAAAGAGGAGGAAAACAGGAAGGTGATAGATTAATGAAGGAGGTGCTTAAACTGAAGGCAATGGTAAGGTCGCCATTGTTGGGACTGAACAATAACACTTTTGTTTACTATTTTTTGAAAAGTATCGTATCCGGGAGGTGGTGGTGTTCACGATGTCTTGAATAAAGTAGAGATGCCCCAGCCCAATATTGGGCAATCTTTTATATCATTATTGCAGTCAATGAGAATCTGAAAATTCCTTC

Coding sequence (CDS)

ATGGACAGTAAGTACAGCAGAGAGTTGTCAGATGAGGATGAAGTGAAAAAGAAAACAGATAGACACCGCCATAGTTGTAGGAAAAGAGATATCGGACAGCGTGGTTGTCGTGAAGATGATAGTGATTCTAATGATGCCAAGGAAGAATATGGGAGTAGATGGCATGAGTCGAAAGATGCGTACAGTGATGAAGATCAGACTAAAGTAAGAATTAGTGAGAAAAATGATGGCCACATACATGAACGGTGGCAAAGTGAAGATGGCAGAAAGAATGCATCTAGACAAAGTCCTGGTGAAGGTTACGAGAGAATAGACAGAGACAGAAACAGGCATGATAGATACGAAAGGCGTCAAGGTGACAATAAGCGTAGAGAACCAGAGAGAGGAGACCAGAAAGAACCCCTTCAAAATATAGATAAGGATGAGCAGAGAATGGGCAGAGATAAAAACAGGCACAATAGAAATAGAATGCATCATAATGAAAATCAGCAGAGAGAACAAGAGAGAGTAGACCGGAAAGAATCATACCGAAGTTCTGATGAAAATGAGCAGCGAGATGATAAAGACAAAGACAAAAAAAAGCACGATAGAGATAGAAGGCATCAAGGTAAAAATCTGCAAGAAGATAGAGGAGATAGGAACGAATCATATCGAAGTTTTGGTGAAAATGAAGAGAGAATGGACAGAGACAAAAACAGACATGATAGAGACAGAAGGCCTCGTGGTGAAAATCGGCATAATAGAGAACAAGAGAGAGGAGACCGGAAAAAGTCTTATACAAGTTCTGATGAAGACGAGCGGCAAGAAAGGAGGCATGACCATAGACGACGTGAATCTGAGAATGGAAATAAAAATGTGGATCGCCATTTGCACCATGATTCAAAAGATGAGCGTGTCAAGGCATTGCATAGAAAATCAGAACATGGCAGGAATTGGATTGACAATGATAGGGAGAAGAAGCATTCAAAACATGATTACAAGTATAGAAATTCTCAAGATCTACGTGATAAGGAGGCGAATGAACAGAGAGAGGATCGTAGAAACATTGGGGATAAAGAAAAGGCTGGCACGCGGACTCTTGACCATCCACAACCTCACAGACAAGAAAAACAGTCTGAGAACAATTTGAATTCCGATGCTTTAAATCTGGGTAAGAGTGGTGGGGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGGAAAAGTATCAACGGACTTGTCAACAAGGTCAATGCTACTAACATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACCTGATCAGGGGCAGGGGTTTATTCTGCCGTTCCTGTATGAAGTCACAAATGGCATCTCCAGGGTTCACCGATGTATTTGCTGCACTGGTTTCTGTTGTAAATACTAAGTTTCCAGAAGTGGGCGATCTTCTTTTGAGAAGAATTGTCTTGCAACTCAAAAGAGCATATAAACGGAATGATAAGCCTCAACTACTAGCTGCTGTAAAATTTATAGCACATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAACTACTCACTGTGTTGCTGGAGAATCCTACGGATGACAGTGTGGAGGTGGCTGTTGGTTTTGTAACTGAGTGTGGATCAATACTACAGGATTTTTCTCCTAAAGGGCTTCATGGAATATTTGAGCGGTTTCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCAATAAGGAAAGCGAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAATTGGACCTTGTGGAGCAAGAAGATCAGTTAACTCATGAAATTTCCCTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAATCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCTGAGGATGAAGAAGACCGATCTGATGCTGGATCGGATGATGAAGAGGATGAGGATGAGGAAAATGATTCTGAAGAAGATGAGGAGCAGATGCAAATAAATGATGAAACAGAGACTAATCTTGTGAACCTCAGAAGGACAATTTATCTGACAATTATGTCCAGTGTGGACTTTGAGGAGGCTGGGCATAAGCTTTTAAAAATTAAACTCGAGCCTGGTCAAGAAATAGAATTGTGCGTCATGTTGTTGGAATGTTGCAGTCAGGAAAGAACTTACCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGTAAGATCAACAAAGTGCATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAGTACTCGATGATTCATAGGCTTGAAACTAATAAGCTCAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTTCCATGGCATGTCTTGTCTTACATTCGATTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAGATCCTTTTCCAGGAACTTTCAGAGCATTTGGGCATTCGACTATTGAACGAACGTCTCAATGACCCGACAATGCAGGATTCGTTTGAATCTATTTTCCCCAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTCTGACTGAGAATTTGCGAGAGTATTTGAAGAATATGCCACGGCTAATCATGCAACAACAAAAACCAGTGTCGGACTCCGATGAGGAATCTGGAAGTTCTGATTCGTCGGGTTCAGATTCAAGTACTTCACAGTCGGAATCAGATTCGTCAAGCTCCAAGGAAAGTGAAGGCGAAGATAGGAGGCGTGGAAAAAAGAGGAGGAAAACAGGAAGGTGA

Protein sequence

MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDAYSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGDNKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSDENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRPRGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVKALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTLDHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKRRKTGR

Homology

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BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot
Match: Q9HCG8 (Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3)

HSP 1 Score: 627.1 bits (1616), Expect = 3.3e-178
Identity = 356/699 (50.93%), Postives = 493/699 (70.53%), Query Frame = 0


Query: 274 HRRRESENGNKNVDRHLHHDSKDERVKALHRKSEHGRNWIDNDR-EKKHSKHDYKYRNSQ 333
           H RRE      N++ +  + S ++R +   R S   R++ D  R + +HS+    Y +S 
Sbjct: 14  HDRRE------NLNSYQRNSSPEDRYEEQER-SPRDRDYFDYSRSDYEHSRRGRSYDSSM 73

Query: 334 DLRDKEANEQREDRRNIGDKEKAGTRTLDHPQPHRQEKQSENNLNSDALN---------- 393
           + R+++  ++RE  R+   K     R+   P P R+  ++    +S A +          
Sbjct: 74  ESRNRDREKRRERERDTDRK-----RSRKSPSPGRRNPETSVTQSSSAQDEPATKKKKDE 133

Query: 394 ----LGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNI 453
               L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSINGL+NKVN +NI  I
Sbjct: 134 LDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISII 193

Query: 454 IPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQL 513
           I EL  EN++RGRGL  RS +++Q ASP FT V+AALV+++N+KFP++G+L+L+R++L  
Sbjct: 194 IQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNF 253

Query: 514 KRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECG 573
           ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEVA+GF+ ECG
Sbjct: 254 RKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECG 313

Query: 574 SILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVE 633
             L   SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ +P +   LDLVE
Sbjct: 314 LKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVE 373

Query: 634 QEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGS 693
           ++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E   D     DAGS
Sbjct: 374 EDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAGS 433

Query: 694 DDEEDEDEENDSEEDEE--QMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKL 753
            +E++E+EE + EEDEE  ++ I+D+TE NLV+ RRTIYL I SS+DFEE  HKLLK++ 
Sbjct: 434 SEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEF 493

Query: 754 EPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEKCFVQQYSMIHRLET 813
              Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K + E+FE  F +QY  IHRLET
Sbjct: 494 PESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLET 553

Query: 814 NKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNE 873
           NKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL E++G+  LN 
Sbjct: 554 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 613

Query: 874 RLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPV 933
           RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P++I+ Q+  V
Sbjct: 614 RLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDV 673

Query: 934 --SDSDEESGSSDSSGSDSSTSQSESDSS-SSKESEGED 953
             + S   S SS SS S+S +S S+SDSS SS ES  E+
Sbjct: 674 EQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEE 700

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot
Match: Q5RA93 (Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 9.6e-178
Identity = 355/699 (50.79%), Postives = 493/699 (70.53%), Query Frame = 0


Query: 274 HRRRESENGNKNVDRHLHHDSKDERVKALHRKSEHGRNWIDNDR-EKKHSKHDYKYRNSQ 333
           H RRE      N++ +  + S ++R +   R S   R++ D  R + +HS+  + Y +S 
Sbjct: 14  HDRRE------NLNSYQRNSSPEDRYEEQER-SPRDRDYFDYSRSDYEHSRRGHSYDSSM 73

Query: 334 DLRDKEANEQREDRRNIGDKEKAGTRTLDHPQPHRQEKQSENNLNSDALN---------- 393
           + R+++  ++RE  R+   K     R+   P P R+  ++    +S A +          
Sbjct: 74  ESRNRDREKRRERERDTDRK-----RSRKSPSPGRRNPETSVTQSSPAQDEPATKKKKDE 133

Query: 394 ----LGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNI 453
               L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSINGL+NKVN +NI  I
Sbjct: 134 LDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISII 193

Query: 454 IPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQL 513
           I EL  EN++RGRGL  RS +++Q ASP FT V+AALV+++N+KFP++G+L+L+R++L  
Sbjct: 194 IQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNF 253

Query: 514 KRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECG 573
           ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEVA+GF+ ECG
Sbjct: 254 RKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECG 313

Query: 574 SILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVE 633
             L   SP+G++ IF R R ILHE EIDKRVQ++IE +FA+RK  F+ +P +   LDLVE
Sbjct: 314 LKLTQVSPRGINAIFGRLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVE 373

Query: 634 QEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGS 693
           ++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E   D     DAGS
Sbjct: 374 EDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAGS 433

Query: 694 DDEEDEDEENDSEEDEE--QMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKL 753
            +E++E+EE + EEDEE  ++ I+D+TE NLV+ RRTIYL I SS+DFEE  HKLLK++ 
Sbjct: 434 SEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEF 493

Query: 754 EPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEKCFVQQYSMIHRLET 813
              Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K + E+FE  F +QY  IHRLET
Sbjct: 494 PESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLET 553

Query: 814 NKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNE 873
           NKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL E++G+  LN 
Sbjct: 554 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 613

Query: 874 RLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPV 933
           RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P++I+ Q+  V
Sbjct: 614 RLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDV 673

Query: 934 --SDSDEESGSSDSSGSDSSTSQSESDSS-SSKESEGED 953
             + S   S SS SS S+S +S S+SDSS SS ES  E+
Sbjct: 674 EQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEE 700

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot
Match: Q8C5N3 (Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 4.1e-176
Identity = 349/691 (50.51%), Postives = 485/691 (70.19%), Query Frame = 0


Query: 274 HRRRESENGNKNVDRHLHHDSKDERVKALHRKSEHGRNWIDNDR-EKKHSKHDYKYRNSQ 333
           H +    N  +    +    S ++R     R S   R + D  R + + S+  Y Y +S 
Sbjct: 7   HMKSSGHNRRETHSSYRRSSSPEDRYTEQER-SPRDRGYSDYSRSDYERSRRGYSYDDSM 66

Query: 334 DLRDKEANEQREDRRNIGDKEKAGTRTLDHPQPHRQEKQSEN------NLNSDALN--LG 393
           + R ++  ++RE  R+   ++++         P R   QS            D L+  L 
Sbjct: 67  ESRSRDREKRRERERDADHRKRSRKSPSPDRSPARGGGQSSPQEEPTWKKKKDELDPLLT 126

Query: 394 KSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 453
           ++GG YIPP KL  M +++ DKSS+ YQR++W+AL+KSINGL+NKVN +NI  II EL  
Sbjct: 127 RTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQ 186

Query: 454 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKR 513
           EN++RGRGL  RS +++Q ASP FT V+AALV+++N+KFP++G+L+L+R++L  ++ Y+R
Sbjct: 187 ENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRR 246

Query: 514 NDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDF 573
           NDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEVA+GF+ ECG  L   
Sbjct: 247 NDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQV 306

Query: 574 SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLT 633
           SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ +P +   LDLVE++DQ T
Sbjct: 307 SPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFT 366

Query: 634 HEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGE-ESEDEEDRSDAGSDDEED 693
           H + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E +S+   D+    S+DEE+
Sbjct: 367 HMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEE 426

Query: 694 EDEENDSEEDE--EQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQE 753
           EDEE + E++E  +++ I+D+TE NLV+ RRTIYL I SS+DFEE  HKLLK++    Q 
Sbjct: 427 EDEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQT 486

Query: 754 IELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEKCFVQQYSMIHRLETNKLRN 813
            ELC M+L+CC+Q+RTY +++GLL  RFC + K + E+FE  F +QY  IHRLETNKLRN
Sbjct: 487 KELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRN 546

Query: 814 VAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDP 873
           VAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL E++G+  LN RL D 
Sbjct: 547 VAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDE 606

Query: 874 TMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIM------QQQKP 933
           T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P++I+      +Q+KP
Sbjct: 607 TLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKP 666

Query: 934 --VSDSDEESGSSDSSGSDSSTSQSESDSSS 945
              S S E S +SDSS S+S +S+S S+SSS
Sbjct: 667 ALTSSSSESSSASDSSDSESDSSESSSESSS 696

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot
Match: Q4WKB9 (Pre-mRNA-splicing factor cwc22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cwc22 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.3e-171
Identity = 331/626 (52.88%), Postives = 450/626 (71.88%), Query Frame = 0


Query: 335 RDKEANEQREDRRNIGDKEKAGTRTLDHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPF 394
           R  E   Q  +R    +K +A  + +       +EKQ+      + L   +SGG YIPP 
Sbjct: 65  RAVERERQLAERLRQHEKREAARKPMT-----EEEKQAAAKAEYEKLLNMRSGGTYIPPA 124

Query: 395 KLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLF 454
           +L  +  ++ DK+S EYQR+ W+AL+KSINGL+NKVN +NIK I+PELF ENL+RGRGLF
Sbjct: 125 RLRALQAQITDKNSKEYQRMAWEALKKSINGLINKVNVSNIKFIVPELFGENLVRGRGLF 184

Query: 455 CRSCMKSQMASPGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAV 514
           CRS MK+Q AS  FT ++AA+ ++VNTK P+VG+LLL R+++Q ++A+KRNDK   +++ 
Sbjct: 185 CRSIMKAQAASLPFTPIYAAMAAIVNTKLPQVGELLLNRLIVQFRKAFKRNDKAVCISST 244

Query: 515 KFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFE 574
            FIAHL NQQVAHE++A ++L +LL  PTDDSVE+AVG   E G  L++ SP     +F+
Sbjct: 245 TFIAHLCNQQVAHEMLAAQILLLLLHKPTDDSVEIAVGLTREVGQHLEEMSPPIALAVFD 304

Query: 575 RFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEID 634
           +FR ILHE +IDKRVQ++IE LF +RK +++  PA++ ELDLVE+EDQ+TH I L +EID
Sbjct: 305 QFRNILHEADIDKRVQYMIEVLFQVRKDRYKDNPAIKDELDLVEEEDQITHRIGLDDEID 364

Query: 635 PEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEENDSEEDE 694
            +  L++FK DP + E+E+ Y+ LK  ILGE S+D+E       +DE++ DE +D EE+E
Sbjct: 365 TQDGLNVFKYDPQWEEHEEAYKKLKAEILGEGSDDDE-------EDEDETDESSDEEEEE 424

Query: 695 EQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQ 754
            QM+I D++ T+LVNLRRTIYLTIMSS+DFEE  HKL+KI L PG E EL  M++ECCSQ
Sbjct: 425 RQMEIKDQSNTDLVNLRRTIYLTIMSSIDFEECCHKLMKISLPPGLEPELPSMIIECCSQ 484

Query: 755 ERTYLRYYGLLGQRFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDA 814
           ERTY ++YGL+G+RF KIN++  + FE  F + Y  IHR ETN+LRN+A+FF H+L TDA
Sbjct: 485 ERTYSKFYGLIGERFAKINRLWSDLFEAAFAKYYDTIHRYETNRLRNIARFFGHMLSTDA 544

Query: 815 LPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRD 874
           + WHV+S I L E++TTSSSRIFIKILFQ+L EHLG+  L ER+ D  ++ SFE +FP D
Sbjct: 545 IGWHVMSVIHLNEDETTSSSRIFIKILFQDLGEHLGLAKLQERMRDEILRPSFEGLFPLD 604

Query: 875 NPKNTRFSINFFTSIGLGGLTENLREYLKNMPR-LIMQQQKPVSDSDEESGSSDSSGSDS 934
           NP+NTRFSIN+FTSIG G LTE++RE+LKN+P+  +       ++SD ES SS S+ S +
Sbjct: 605 NPRNTRFSINYFTSIGFGILTEDMREHLKNLPKPTVPALPARDAESDSESVSSHSTCS-T 664

Query: 935 STSQSESDSSSSKESEGEDRRRGKKR 960
            T  S S S S   S    R RG++R
Sbjct: 665 CTGSSRSRSRSYSYSRSPSRSRGRRR 677

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot
Match: Q5ZKA3 (Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus OX=9031 GN=CWC22 PE=2 SV=2)

HSP 1 Score: 603.6 bits (1555), Expect = 3.9e-171
Identity = 354/727 (48.69%), Postives = 492/727 (67.68%), Query Frame = 0


Query: 244 NRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVKALH 303
           + H R++    R +S T  D D  ++R    RRR   + ++    +   +  D+R     
Sbjct: 12  SNHERKERYSPRHRSLTPEDRDVERDRSRSPRRRRYSDDSRYDQEYSRREYYDDR----- 71

Query: 304 RKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTLDHP 363
             S  GR  ++  R++ + K +          +++ + +R+ R +  D       T+   
Sbjct: 72  --SSEGRR-MERGRDRYYEKWE----------ERDYDRRRKRRLSSPDHRSPERSTVQGS 131

Query: 364 QPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 423
             H +    +     D + L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSI
Sbjct: 132 NTHEEATSKKKKEEVDPI-LTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSI 191

Query: 424 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVNTKF 483
           NGLVNKVN +NI+NII EL  EN++RGRGL  RS +++Q ASP FT V+AALV+++N+KF
Sbjct: 192 NGLVNKVNVSNIENIIHELLQENIVRGRGLLSRSILQAQGASPIFTHVYAALVAIINSKF 251

Query: 484 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 543
           P +G+L+L+R++L  ++ Y+RNDK   L + KF+AHL+NQ VAHE++ LE+LT+LLE PT
Sbjct: 252 PNIGELILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPT 311

Query: 544 DDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 603
           DDS+EVA+GF+ E G  L + SP+G++ IF+R R ILHE +ID RVQ++IE +FA+RK  
Sbjct: 312 DDSIEVAIGFLKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDG 371

Query: 604 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 663
           F+ +P +   LDLVE+EDQ TH + L++E +PE  L++FK DPNF+ENE++Y+ LKK IL
Sbjct: 372 FKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNPEDVLNVFKMDPNFMENEEKYKALKKEIL 431

Query: 664 GE-ESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 723
            E +SE E D+    SD+EE+EDEE D  ED +++ ++D+TE NLV    TIYL I SS+
Sbjct: 432 DEGDSESEPDQEAGSSDEEEEEDEEED--EDGQKVTVHDKTEINLVPSVGTIYLAIQSSL 491

Query: 724 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 783
           DFEE  HKLLK+     Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K + E+FE 
Sbjct: 492 DFEECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEA 551

Query: 784 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 843
            F +QY  IHRLETNKLRNVAK FAHLL TD++PW VL  I L+EE TTSSSRIF+KI F
Sbjct: 552 IFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFF 611

Query: 844 QELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 903
           QELSE++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+L
Sbjct: 612 QELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHL 671

Query: 904 KNMPRLIMQQQKPVSDSDEESGS---------SDSSGSDSSTSQSESDSSSSKESEGEDR 961
           KN P++IM Q++ V  SD  S S         SDSS S S +S S   SSSS +S   D 
Sbjct: 672 KNAPKMIMTQKQDVESSDSSSSSETDSSSDSDSDSSSSSSESSSSSDSSSSSSDSSDSDA 717

[Close]

BLAST of Cp4.1LG04g00230 vs. NCBI nr
Match: XP_023530862.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >XP_023530863.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >XP_023530864.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >XP_023530865.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >XP_023530866.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1790 bits (4637), Expect = 0.0
Identity = 964/964 (100.00%), Postives = 964/964 (100.00%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA
Sbjct: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD
Sbjct: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP
Sbjct: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
           RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK
Sbjct: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTIMS 720
           NILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTIMS
Sbjct: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTIMS 720

Query: 721 SVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENF 780
           SVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENF
Sbjct: 721 SVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENF 780

Query: 781 EKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKI 840
           EKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKI
Sbjct: 781 EKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKI 840

Query: 841 LFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLRE 900
           LFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLRE
Sbjct: 841 LFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLRE 900

Query: 901 YLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKRR 960
           YLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKRR
Sbjct: 901 YLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKRR 960

Query: 961 KTGR 964
           KTGR
Sbjct: 961 KTGR 964

[Close]

BLAST of Cp4.1LG04g00230 vs. NCBI nr
Match: XP_022969283.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969291.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969299.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969308.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969316.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969320.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969324.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima])

HSP 1 Score: 1725 bits (4467), Expect = 0.0
Identity = 932/965 (96.58%), Postives = 949/965 (98.34%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRE SDEDEVKKKTDRHRHS RKRD+GQRGCREDDSDSNDA+EEYGSRWHE KD 
Sbjct: 1   MDSKYSRESSDEDEVKKKTDRHRHSSRKRDLGQRGCREDDSDSNDAREEYGSRWHELKDV 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDG IHERWQSEDGRKNASR+SPGEGYERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRRSPGEGYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           NKRRE ERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 121 NKRREQERGDQKEPLQNIDKDEQRMNRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           ENEQRDDKDKDKKKHDRDRRHQGKNL+EDRGDRNE+Y+SFGENEERMDRDK+RHDRDRR 
Sbjct: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLREDRGDRNETYQSFGENEERMDRDKSRHDRDRRH 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
            GENRHNREQ+RGD KKSYTSSDEDE+QER+HDHRR ESENGNKN+DRHLHHDSKDERVK
Sbjct: 241 LGENRHNREQDRGDWKKSYTSSDEDEQQERKHDHRRCESENGNKNMDRHLHHDSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWNDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQSENNLNSDA NLGKSGGVYIPPFKLARMM+EVQDKSS+EYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQSENNLNSDASNLGKSGGVYIPPFKLARMMREVQDKSSVEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEMSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
           NILGEESEDEEDRSDAGSDDEEDEDEEND+EE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDNEEEDEEQMQINDETETNLVNLRRTIYLTIM 720

Query: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
           SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780

Query: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
           FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840

Query: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
           ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900

Query: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
           EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSS+ESEGEDRRRGKKR
Sbjct: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSEESEGEDRRRGKKR 960

Query: 961 RKTGR 964
           RKTGR
Sbjct: 961 RKTGR 965

[Close]

BLAST of Cp4.1LG04g00230 vs. NCBI nr
Match: KAG6588511.1 (Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1722 bits (4461), Expect = 0.0
Identity = 936/965 (96.99%), Postives = 946/965 (98.03%), Query Frame = 0


Query: 1    MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
            MDSKYSRE SDEDEVKKKTDRHRHS RKRDIGQRGCREDDSDSNDA+EEYGSRWH  KDA
Sbjct: 107  MDSKYSRESSDEDEVKKKTDRHRHSSRKRDIGQRGCREDDSDSNDAREEYGSRWHVLKDA 166

Query: 61   YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
            YSDEDQTKVRISEKNDG IHERWQSEDGRKNASRQSPGE YERIDRDRNRHDRYERRQGD
Sbjct: 167  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRQSPGERYERIDRDRNRHDRYERRQGD 226

Query: 121  NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
             KRREPERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 227  KKRREPERGDQKEPLQNIDKDEQRMDRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 286

Query: 181  ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
            +NEQRDDKDKDKKKHDRD RHQGKNL+EDRGDRNESY+SFGENEERMDRDKNRHDRDRR 
Sbjct: 287  DNEQRDDKDKDKKKHDRDGRHQGKNLREDRGDRNESYQSFGENEERMDRDKNRHDRDRRH 346

Query: 241  RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
            RGENRHNREQERGDRKKSYTSSDEDE+QERRHDHRRRESENGNKN+DRH   DSKDERVK
Sbjct: 347  RGENRHNREQERGDRKKSYTSSDEDEQQERRHDHRRRESENGNKNMDRH---DSKDERVK 406

Query: 301  ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
            ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 407  ALHRKSEHGRNWSDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 466

Query: 361  DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
            DHPQPHRQEKQ ENNLNSDA NLGKSGGVYIPPFKLARMMKEVQDKSS+EYQRLTWDALR
Sbjct: 467  DHPQPHRQEKQPENNLNSDASNLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALR 526

Query: 421  KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
            KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 527  KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 586

Query: 481  TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
            TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 587  TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 646

Query: 541  NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
            NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 647  NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 706

Query: 601  KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
            KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 707  KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 766

Query: 661  NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
            NILGEESEDE+DRSDAGSDDEEDEDEENDSEE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 767  NILGEESEDEDDRSDAGSDDEEDEDEENDSEEEDEEQMQINDETETNLVNLRRTIYLTIM 826

Query: 721  SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
            SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 827  SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 886

Query: 781  FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
            FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 887  FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 946

Query: 841  ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
            ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 947  ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 1006

Query: 901  EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
            EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSS+ESEGEDRRRGKKR
Sbjct: 1007 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSEESEGEDRRRGKKR 1066

Query: 961  RKTGR 964
            RKTGR
Sbjct: 1067 RKTGR 1068

[Close]

BLAST of Cp4.1LG04g00230 vs. NCBI nr
Match: KAG7022341.1 (Pre-mRNA-splicing factor CWC22-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1722 bits (4461), Expect = 0.0
Identity = 936/965 (96.99%), Postives = 946/965 (98.03%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRE SDEDEVKKKTDRHRHS RKRDIGQRGCREDDSDSNDA+EEYGSRWH  KDA
Sbjct: 1   MDSKYSRESSDEDEVKKKTDRHRHSSRKRDIGQRGCREDDSDSNDAREEYGSRWHVLKDA 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDG IHERWQSEDGRKNASRQSPGE YERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRQSPGERYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
            KRREPERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 121 KKRREPERGDQKEPLQNIDKDEQRMDRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           +NEQRDDKDKDKKKHDRD RHQGKNL+EDRGDRNESY+SFGENEERMDRDKNRHDRDRR 
Sbjct: 181 DNEQRDDKDKDKKKHDRDGRHQGKNLREDRGDRNESYQSFGENEERMDRDKNRHDRDRRH 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
           RGENRHNREQERGDRKKSYTSSDEDE+QERRHDHRRRESENGNKN+DRH   DSKDERVK
Sbjct: 241 RGENRHNREQERGDRKKSYTSSDEDEQQERRHDHRRRESENGNKNMDRH---DSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWSDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQ ENNLNSDA NLGKSGGVYIPPFKLARMMKEVQDKSS+EYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQPENNLNSDASNLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
           NILGEESEDE+DRSDAGSDDEEDEDEENDSEE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 661 NILGEESEDEDDRSDAGSDDEEDEDEENDSEEEDEEQMQINDETETNLVNLRRTIYLTIM 720

Query: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
           SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780

Query: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
           FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840

Query: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
           ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900

Query: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
           EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSS+ESEGEDRRRGKKR
Sbjct: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSEESEGEDRRRGKKR 960

Query: 961 RKTGR 964
           RKTGR
Sbjct: 961 RKTGR 962

[Close]

BLAST of Cp4.1LG04g00230 vs. NCBI nr
Match: XP_022928022.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928025.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928034.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928043.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928050.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])

HSP 1 Score: 1721 bits (4457), Expect = 0.0
Identity = 935/965 (96.89%), Postives = 945/965 (97.93%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKY RE SDEDEVKKKTDRHRHS RK DIGQRGC EDDSDSNDA+EEYGSRWHESKDA
Sbjct: 1   MDSKYIRESSDEDEVKKKTDRHRHSSRKSDIGQRGCHEDDSDSNDAREEYGSRWHESKDA 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDG IHERWQSEDGRKNASRQSPGE YERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRQSPGERYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           NKRREPERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 121 NKRREPERGDQKEPLQNIDKDEQRMDRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           +NEQRDDKDKDKKKHDRD RHQGKNL+EDRGDRNESY+SFGENEERMDRDKNRHDRDRR 
Sbjct: 181 DNEQRDDKDKDKKKHDRDGRHQGKNLREDRGDRNESYQSFGENEERMDRDKNRHDRDRRH 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
           RGENRHNREQERGDRKKSYTSSDEDE+QERRHDHRRRESENGNKN+DRH   DSKDERVK
Sbjct: 241 RGENRHNREQERGDRKKSYTSSDEDEQQERRHDHRRRESENGNKNMDRH---DSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWSDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQ ENNLNSDA NLGKSGGVYIPPFKLARMMKEVQDKSS+EYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQPENNLNSDASNLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTD+SVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDNSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
           NILGEESEDEEDRSDAGSDDEEDEDEENDSEE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEEEDEEQMQINDETETNLVNLRRTIYLTIM 720

Query: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
           SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780

Query: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
           FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840

Query: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
           ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900

Query: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
           EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSST QSESDSSSS+ESEGEDRRRGKKR
Sbjct: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTKQSESDSSSSEESEGEDRRRGKKR 960

Query: 961 RKTGR 964
           RKTGR
Sbjct: 961 RKTGR 962

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL
Match: A0A6J1I0I9 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468333 PE=4 SV=1)

HSP 1 Score: 1725 bits (4467), Expect = 0.0
Identity = 932/965 (96.58%), Postives = 949/965 (98.34%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRE SDEDEVKKKTDRHRHS RKRD+GQRGCREDDSDSNDA+EEYGSRWHE KD 
Sbjct: 1   MDSKYSRESSDEDEVKKKTDRHRHSSRKRDLGQRGCREDDSDSNDAREEYGSRWHELKDV 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDG IHERWQSEDGRKNASR+SPGEGYERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRRSPGEGYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           NKRRE ERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 121 NKRREQERGDQKEPLQNIDKDEQRMNRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           ENEQRDDKDKDKKKHDRDRRHQGKNL+EDRGDRNE+Y+SFGENEERMDRDK+RHDRDRR 
Sbjct: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLREDRGDRNETYQSFGENEERMDRDKSRHDRDRRH 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
            GENRHNREQ+RGD KKSYTSSDEDE+QER+HDHRR ESENGNKN+DRHLHHDSKDERVK
Sbjct: 241 LGENRHNREQDRGDWKKSYTSSDEDEQQERKHDHRRCESENGNKNMDRHLHHDSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWNDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQSENNLNSDA NLGKSGGVYIPPFKLARMM+EVQDKSS+EYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQSENNLNSDASNLGKSGGVYIPPFKLARMMREVQDKSSVEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEMSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
           NILGEESEDEEDRSDAGSDDEEDEDEEND+EE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDNEEEDEEQMQINDETETNLVNLRRTIYLTIM 720

Query: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
           SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780

Query: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
           FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840

Query: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
           ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900

Query: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
           EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSS+ESEGEDRRRGKKR
Sbjct: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSEESEGEDRRRGKKR 960

Query: 961 RKTGR 964
           RKTGR
Sbjct: 961 RKTGR 965

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL
Match: A0A6J1EQK4 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111434931 PE=4 SV=1)

HSP 1 Score: 1721 bits (4457), Expect = 0.0
Identity = 935/965 (96.89%), Postives = 945/965 (97.93%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKY RE SDEDEVKKKTDRHRHS RK DIGQRGC EDDSDSNDA+EEYGSRWHESKDA
Sbjct: 1   MDSKYIRESSDEDEVKKKTDRHRHSSRKSDIGQRGCHEDDSDSNDAREEYGSRWHESKDA 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
           YSDEDQTKVRISEKNDG IHERWQSEDGRKNASRQSPGE YERIDRDRNRHDRYERRQGD
Sbjct: 61  YSDEDQTKVRISEKNDGRIHERWQSEDGRKNASRQSPGERYERIDRDRNRHDRYERRQGD 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           NKRREPERGDQKEPLQNIDKDEQRM RDKNRHNRNRMHHNEN QREQERVDRKESYRSSD
Sbjct: 121 NKRREPERGDQKEPLQNIDKDEQRMDRDKNRHNRNRMHHNENHQREQERVDRKESYRSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMDRDKNRHDRDRRP 240
           +NEQRDDKDKDKKKHDRD RHQGKNL+EDRGDRNESY+SFGENEERMDRDKNRHDRDRR 
Sbjct: 181 DNEQRDDKDKDKKKHDRDGRHQGKNLREDRGDRNESYQSFGENEERMDRDKNRHDRDRRH 240

Query: 241 RGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDERVK 300
           RGENRHNREQERGDRKKSYTSSDEDE+QERRHDHRRRESENGNKN+DRH   DSKDERVK
Sbjct: 241 RGENRHNREQERGDRKKSYTSSDEDEQQERRHDHRRRESENGNKNMDRH---DSKDERVK 300

Query: 301 ALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTRTL 360
           ALHRKSEHGRNW DNDREKKHSKHDYKYRNSQDLRDKE NEQREDRRNIG+KEKAGTRTL
Sbjct: 301 ALHRKSEHGRNWSDNDREKKHSKHDYKYRNSQDLRDKEVNEQREDRRNIGEKEKAGTRTL 360

Query: 361 DHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALR 420
           DHPQPHRQEKQ ENNLNSDA NLGKSGGVYIPPFKLARMMKEVQDKSS+EYQRLTWDALR
Sbjct: 361 DHPQPHRQEKQPENNLNSDASNLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALR 420

Query: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480
           KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN
Sbjct: 421 KSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSVVN 480

Query: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540
           TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE
Sbjct: 481 TKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLE 540

Query: 541 NPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600
           NPTD+SVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR
Sbjct: 541 NPTDNSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIR 600

Query: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660
           KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK
Sbjct: 601 KAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKK 660

Query: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETETNLVNLRRTIYLTIM 720
           NILGEESEDEEDRSDAGSDDEEDEDEENDSEE DEEQMQINDETETNLVNLRRTIYLTIM
Sbjct: 661 NILGEESEDEEDRSDAGSDDEEDEDEENDSEEEDEEQMQINDETETNLVNLRRTIYLTIM 720

Query: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780
           SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN
Sbjct: 721 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQEN 780

Query: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840
           FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK
Sbjct: 781 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 840

Query: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900
           ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR
Sbjct: 841 ILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 900

Query: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKKR 960
           EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSST QSESDSSSS+ESEGEDRRRGKKR
Sbjct: 901 EYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTKQSESDSSSSEESEGEDRRRGKKR 960

Query: 961 RKTGR 964
           RKTGR
Sbjct: 961 RKTGR 962

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL
Match: A0A6J1JE49 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111483625 PE=4 SV=1)

HSP 1 Score: 1397 bits (3617), Expect = 0.0
Identity = 795/966 (82.30%), Postives = 858/966 (88.82%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRE SDEDE+K+KT+RH HS RKRD  Q G  ED+SDS+DA E Y  R HE K  
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRHPHSSRKRDR-QHGHHEDESDSSDASEGYRGRRHEKK-- 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
             D+DQTK RIS  NDGHIHERWQ+ED  K AS++ P EGY+RIDR++N   R +R   +
Sbjct: 61  --DDDQTK-RISGNNDGHIHERWQNEDENKTASQRFPDEGYKRIDREKNGQGRDKRHHDE 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           N+  E ERGD+KE  Q+ +++EQRM RDK RHNR+R H +E++QREQERVDRKESY+SSD
Sbjct: 121 NRCIEQERGDRKESHQSFEEEEQRMDRDKKRHNRDRRHQSEHRQREQERVDRKESYQSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQED--RGDRNESYRSFGENEERMDRDKNRHDRDR 240
           E+E+    DK+K +HDRDRRH+GKN   +  R  + ESY+S  E+E    R+KNRHDRDR
Sbjct: 181 EDER--SVDKEKNRHDRDRRHRGKNPHRELGRSGKKESYQSNDEDERITGRNKNRHDRDR 240

Query: 241 RPRGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDER 300
           R   EN+H+RE+ERGD+K+ Y S DEDE + RRHDHR+ E+ENGNK  DRHL HDSKDER
Sbjct: 241 RYEDENQHSREKERGDQKELYQSYDEDEWKNRRHDHRQCETENGNKITDRHLRHDSKDER 300

Query: 301 VKALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTR 360
            K LHRKSE  RNW DNDRE+KHSKHDYK  NSQD RDKE +  REDRRNIG KE  GT 
Sbjct: 301 DKKLHRKSEDRRNWADNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTG 360

Query: 361 TLDHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDA 420
           TL+H + HRQEKQSENNLN DA NLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDA
Sbjct: 361 TLNHLKSHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDA 420

Query: 421 LRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSV 480
           LRKSINGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALV+V
Sbjct: 421 LRKSINGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAV 480

Query: 481 VNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVL 540
           VNTKFPEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVL
Sbjct: 481 VNTKFPEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVL 540

Query: 541 LENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA 600
           LENPTDDSVEVAVGFVTECGSIL D SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA
Sbjct: 541 LENPTDDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA 600

Query: 601 IRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDL 660
           IRKAKFEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDL
Sbjct: 601 IRKAKFEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDL 660

Query: 661 KKNILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTI 720
           KKNILGEESEDEEDRSDAGSD++E+E++E+  EEDEEQM INDETETNLVNLRRTIYLTI
Sbjct: 661 KKNILGEESEDEEDRSDAGSDEDEEEEDES-EEEDEEQMLINDETETNLVNLRRTIYLTI 720

Query: 721 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE 780
           MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE
Sbjct: 721 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE 780

Query: 781 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 840
           NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI
Sbjct: 781 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 840

Query: 841 KILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 900
           KILFQELSEHLGIRLLNERL DPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENL
Sbjct: 841 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENL 900

Query: 901 REYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKK 960
           REYLKNMPRLIMQQQKPVS+SDEESGSSDSS SDS +S S SDSS S+E E EDRRRGKK
Sbjct: 901 REYLKNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVS-SDSSESEEEE-EDRRRGKK 955

Query: 961 RRKTGR 964
           RRK+GR
Sbjct: 961 RRKSGR 955

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL
Match: A0A6J1FSI6 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111448393 PE=4 SV=1)

HSP 1 Score: 1397 bits (3615), Expect = 0.0
Identity = 795/966 (82.30%), Postives = 856/966 (88.61%), Query Frame = 0


Query: 1   MDSKYSRELSDEDEVKKKTDRHRHSCRKRDIGQRGCREDDSDSNDAKEEYGSRWHESKDA 60
           MDSKYSRE SDEDE+K+KT+R  HS RKRD  Q G  EDDSDS+DA E Y  R HE K  
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRQPHSSRKRDR-QHGHHEDDSDSSDASEGYRGRRHEKK-- 60

Query: 61  YSDEDQTKVRISEKNDGHIHERWQSEDGRKNASRQSPGEGYERIDRDRNRHDRYERRQGD 120
             D+DQ K RIS  NDGH HERWQ+ED +K AS++ P EGY+RIDR+ N   R +R    
Sbjct: 61  --DDDQAK-RISGNNDGHTHERWQNEDEKKTASQRFPDEGYKRIDRENNGQGRDKRHHDG 120

Query: 121 NKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQERVDRKESYRSSD 180
           N+ RE ERGD+KE  Q+ + +EQRM RDK RHNR+R H +E++QREQERVDRKES++SSD
Sbjct: 121 NRCREQERGDRKESHQSFEAEEQRMDRDKKRHNRDRRHQSEHRQREQERVDRKESHQSSD 180

Query: 181 ENEQRDDKDKDKKKHDRDRRHQGKNLQED--RGDRNESYRSFGENEERMDRDKNRHDRDR 240
           E+E+    DK+K +HDRDRRH+GKN   +  R  + ESY+S  E+E+   R+KNRHDRDR
Sbjct: 181 EDER--SVDKEKNRHDRDRRHRGKNPHRELGRSGKKESYQSNDEDEQITGRNKNRHDRDR 240

Query: 241 RPRGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDRHLHHDSKDER 300
           R   EN+H+RE+ERGD+K+ Y S DEDE + RRHD R+RE+ENGNK  DRHL HDSKDER
Sbjct: 241 RHEDENQHSREKERGDQKELYHSYDEDEWKNRRHDRRQRETENGNKITDRHLRHDSKDER 300

Query: 301 VKALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRNIGDKEKAGTR 360
            K LHRKSE  RNW DNDRE+KHSKHDYK  NSQD RDKE +  REDRRNIG KE  GT 
Sbjct: 301 DKELHRKSEDRRNWTDNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTG 360

Query: 361 TLDHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDA 420
           TL+H QPHRQEKQSENNLN DA NLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDA
Sbjct: 361 TLNHLQPHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDA 420

Query: 421 LRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVSV 480
           LRKSINGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALV+V
Sbjct: 421 LRKSINGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAV 480

Query: 481 VNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVL 540
           VNTKFPEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVL
Sbjct: 481 VNTKFPEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVL 540

Query: 541 LENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA 600
           LENPTDDSVEVAVGFVTECGSIL D SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA
Sbjct: 541 LENPTDDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA 600

Query: 601 IRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDL 660
           IRKAKFEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDL
Sbjct: 601 IRKAKFEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDL 660

Query: 661 KKNILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNLVNLRRTIYLTI 720
           KKNILGEESEDEEDRSDAGSD++E+E++E+  EEDEEQM INDETETNLVNLRRTIYLTI
Sbjct: 661 KKNILGEESEDEEDRSDAGSDEDEEEEDES-EEEDEEQMLINDETETNLVNLRRTIYLTI 720

Query: 721 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE 780
           MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE
Sbjct: 721 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE 780

Query: 781 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 840
           NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI
Sbjct: 781 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 840

Query: 841 KILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 900
           KILFQELSEHLGIRLLNERL DPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENL
Sbjct: 841 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENL 900

Query: 901 REYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKESEGEDRRRGKK 960
           REYLKNMPRLIMQQQKPVS+SDEESGSSDSS SDS +S S SDSS S+E E EDRRRGKK
Sbjct: 901 REYLKNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVS-SDSSESEEEE-EDRRRGKK 955

Query: 961 RRKTGR 964
           RRK+GR
Sbjct: 961 RRKSGR 955

[Close]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL
Match: A0A1S3BNN3 (pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491527 PE=4 SV=1)

HSP 1 Score: 1255 bits (3248), Expect = 0.0
Identity = 696/798 (87.22%), Postives = 736/798 (92.23%), Query Frame = 0


Query: 170 VDRKESYRSSDENEQRDDK--DKDKKKHDRDRRHQGKNLQED--RGDRNESYRSFGENEE 229
           +DRK S  SSDE+E + ++   +D  + DRDRRHQ KNL  +  RGD+ +SY SF E E+
Sbjct: 1   MDRKYSRESSDEDEAKGNRRASRDNDRQDRDRRHQDKNLHREVERGDKKKSYESFDEGEQ 60

Query: 230 RMDRDKNRHDRDRRPRGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKN 289
           R +R+K+RHDRDRR   E RH+R  ER +RK+SY SSDEDER+ RRHD R+RE EN NKN
Sbjct: 61  RTERNKSRHDRDRRHHDEKRHSRGHERENRKESYQSSDEDERKNRRHDRRQREIENENKN 120

Query: 290 VDRHLHHDSKDERVKALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQRED 349
           +DR L HDSKDER K L RKS+H RN  DNDRE++HSKHDYK+ NSQD RDKE + +RED
Sbjct: 121 MDRRLDHDSKDERDKELLRKSDHRRNRADNDRERRHSKHDYKHNNSQDQRDKETSGRRED 180

Query: 350 RRNIGDKEKAGTRTLDHPQPHRQEKQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQD 409
           RRNIG+KEK GT T+DH QPHRQEKQ+ENNLN D+ NLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 181 RRNIGEKEKVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 240

Query: 410 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 469
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
Sbjct: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300

Query: 470 PGFTDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 529
           PGFTDVFAALV+VVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 301 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 360

Query: 530 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEI 589
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSIL+D SPKGLHGIFERFRGILHEGEI
Sbjct: 361 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 420

Query: 590 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD 649
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD
Sbjct: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 480

Query: 650 PNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEENDSEE-DEEQMQINDETE 709
           PNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEE++SEE DEEQMQINDETE
Sbjct: 481 PNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEEDESEEEDEEQMQINDETE 540

Query: 710 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 769
           TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 541 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 600

Query: 770 LGQRFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 829
           LGQRFCKINKV+QENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 601 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 660

Query: 830 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSIN 889
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL DPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 661 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 720

Query: 890 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSS 949
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEES SSDSS SDSS+S+SESDS  
Sbjct: 721 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSDSSDSDSSSSESESDS-- 780

Query: 950 SKESEGEDRRRGKKRRKT 962
            ++ E +DRRR KKRRKT
Sbjct: 781 -EDRESKDRRREKKRRKT 795

[Close]

BLAST of Cp4.1LG04g00230 vs. TAIR 10
Match: AT1G80930.1 (MIF4G domain-containing protein / MA3 domain-containing protein )

HSP 1 Score: 890.6 bits (2300), Expect = 1.1e-258
Identity = 582/975 (59.69%), Postives = 691/975 (70.87%), Query Frame = 0


Query: 10  SDEDEVKKKTDRHRHSCRKRDIGQRGCREDD-------SDSNDAK-------------EE 69
           SDE+E  ++ DR R   R  D+ +     DD       SD  D K             + 
Sbjct: 8   SDEEERVRRRDRRRRE-RSPDVRRSRTETDDVARRVRVSDDEDRKSSRRDLEIGGTVADG 67

Query: 70  YGSRWHESKDAYSDEDQTKVRISEKNDGHIHERWQSEDGR-KNASRQSPGEGYERIDRDR 129
            G R  + +   + +D+   R S K+    +    SED R K     S G+G  R+++ R
Sbjct: 68  EGRRGDKVRRKETSDDEELARRSRKDRKEANS--GSEDDRGKRIEVDSDGDGERRVNKGR 127

Query: 130 NRHDRYERRQGDNKRREPERGDQKEPLQNIDKDEQRMGRDKNRHNRNRMHHNENQQREQE 189
           N  DR  R    +   +  +G++KEP++ +D D  R GR ++              +  E
Sbjct: 128 NT-DRV-RADTSSDEEDDLKGNKKEPME-VDDDYGRRGRRRS-------------PKVME 187

Query: 190 RVDRKESYRSSDENEQRDDKDKDKKKHDRDRRHQGKNLQEDRGDRNESYRSFGENEERMD 249
           +  R+ S+R S     R   DK   + D DR       Q  RG R ES R      +R D
Sbjct: 188 KQGRERSHRGS-----RVIADKPSDEED-DR-------QRSRGGRRESQR------KRRD 247

Query: 250 RDKNRHDRDRRPRGENRHNREQERGDRKKSYTSSDEDERQERRHDHRRRESENGNKNVDR 309
              +  D +   R E R   + +RG                 + D R R+  +G++N  R
Sbjct: 248 HRASDDDEEGEIRSERRGKEKNDRGSEGL------------LKRDRRERDLTDGHENGSR 307

Query: 310 HLHHDSKDERVKALHRKSEHGRNWIDNDREKKHSKHDYKYRNSQDLRDKEANEQREDRRN 369
               + KD   +             D  R++K  +H+ KY +SQ  RDK   E       
Sbjct: 308 RRESERKDRSRRD------------DGVRDEKERRHNDKYDDSQ--RDKLRKE------- 367

Query: 370 IGDKEKAGTRTLDHPQPHRQE-KQSENNLNSDALNLGKSGGVYIPPFKLARMMKEVQDKS 429
             D  K   + ++ P+P   E   SENN    A+ LGK+GGVYIPPFKLARMMKEV+DKS
Sbjct: 368 --DSRKREEKKIEVPKPKLAELNPSENN----AMALGKTGGVYIPPFKLARMMKEVEDKS 427

Query: 430 SIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPG 489
           S+EYQRLTWDALRKSINGLVNKVNA+NIKNIIPELFAENLIRGRGLFCRSCMKSQMASPG
Sbjct: 428 SVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPG 487

Query: 490 FTDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAH 549
           FTDVFAALV+V+N KFPEV +LLL+R+VLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVA 
Sbjct: 488 FTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAE 547

Query: 550 EIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDK 609
           EIIALEL+T+LL +PTDDSVEVAVGFVTECG++LQD SP+GL+GIFERFRGILHEGEIDK
Sbjct: 548 EIIALELVTILLGDPTDDSVEVAVGFVTECGAMLQDVSPRGLNGIFERFRGILHEGEIDK 607

Query: 610 RVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPN 669
           RVQ+LIE LFA RKAKF+G+PAVRPELDLV  E++ +H++SL  EIDPE ALDIFK DP+
Sbjct: 608 RVQYLIESLFATRKAKFQGHPAVRPELDLV--EEKYSHDLSLDHEIDPETALDIFKPDPD 667

Query: 670 FLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEENDSEEDEEQMQINDETETNL 729
           F+ENEK+YE LKK +LG+E  ++ED SDA S+D ++E++E+D EEDEEQM+I DETETNL
Sbjct: 668 FVENEKKYEALKKELLGDEESEDEDGSDASSEDNDEEEDESD-EEDEEQMRIRDETETNL 727

Query: 730 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ 789
           VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQ
Sbjct: 728 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQ 787

Query: 790 RFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE 849
           RFC INK+HQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVL+YIRLTE
Sbjct: 788 RFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTE 847

Query: 850 EDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFT 909
           EDTTSSSRIFIKILFQELSEHLGIRLLNERL DPTMQ+S ESIFP+DNPKNTRF+INFFT
Sbjct: 848 EDTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFT 900

Query: 910 SIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESGSSDSSGSDSSTSQSESDSSSSKE 963
           SIGLGG+TENLREYLKNMP LIMQ+QK V++S  ESGSS  S S  S S+SES SSSS  
Sbjct: 908 SIGLGGITENLREYLKNMPSLIMQRQKQVAES--ESGSSSGSDSSDSESESESGSSSSSS 900

[Close]

BLAST of Cp4.1LG04g00230 vs. TAIR 10
Match: AT1G52325.1 (Initiation factor eIF-4 gamma, MA3 )

HSP 1 Score: 141.0 bits (354), Expect = 5.1e-33
Identity = 81/184 (44.02%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 719 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQE 778
           MSS+DFEEAGHKLLKI+LE GQ +ELCVM+LECC++E+TY  +Y                
Sbjct: 1   MSSLDFEEAGHKLLKIRLEQGQGMELCVMVLECCTEEKTYRSFY---------------- 60

Query: 779 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 838
                                                            ED+TSSS IF+
Sbjct: 61  ------------------------------------------------VEDSTSSSLIFL 120

Query: 839 KILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 898
           K LF +LSE L I+LLNE+L DPTM+++FESIFP+D+ KNT FSI FFT IGLGG+T+ L
Sbjct: 121 KTLFLQLSELLRIKLLNEKLQDPTMEETFESIFPKDHRKNTLFSIIFFTKIGLGGITQTL 120

Query: 899 REYL 903
           R+ +
Sbjct: 181 RQLI 120

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HCG8	3.3e-178	50.93	Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=...	[more]
Q5RA93	9.6e-178	50.79	Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=...	[more]
Q8C5N3	4.1e-176	50.51	Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV...	[more]
Q4WKB9	1.3e-171	52.88	Pre-mRNA-splicing factor cwc22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / A...	[more]
Q5ZKA3	3.9e-171	48.69	Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus OX=9031 GN=CWC22 PE=2 SV...	[more]

BLAST of Cp4.1LG04g00230 vs. NCBI nr


Match Name	Identity	Description
XP_023530862.1	100.00	pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >XP_02353086...	[more]
XP_022969283.1	96.58	pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969291.1 pre-mR...	[more]
KAG6588511.1	96.99	Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7022341.1	96.99	Pre-mRNA-splicing factor CWC22-like protein [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022928022.1	96.89	pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928025.1 pre-...	[more]

BLAST of Cp4.1LG04g00230 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1I0I9	96.58	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114683...	[more]
A0A6J1EQK4	96.89	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1JE49	82.30	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114836...	[more]
A0A6J1FSI6	82.30	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S3BNN3	87.22	pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Cp4.1LG04g00230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80930.1	1.1e-258	59.69	MIF4G domain-containing protein / MA3 domain-containing protein	[more]
AT1G52325.1	5.1e-33	44.02	Initiation factor eIF-4 gamma, MA3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003891	Initiation factor eIF-4 gamma, MA3	SMART	SM00544	ma3_7	coord: 710..816 e-value: 3.8E-38 score: 142.7
IPR003891	Initiation factor eIF-4 gamma, MA3	PFAM	PF02847	MA3	coord: 710..816 e-value: 2.9E-30 score: 104.6
IPR003891	Initiation factor eIF-4 gamma, MA3	PROSITE	PS51366	MI	coord: 709..825 score: 24.640966
IPR003890	MIF4G-like, type 3	SMART	SM00543	if4_15	coord: 420..603 e-value: 2.2E-38 score: 143.5
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 375..663 e-value: 5.2E-99 score: 332.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..703
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 668..700
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 911..964
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 911..943
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..373
None	No IPR available	PANTHER	PTHR18034	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	coord: 372..951
None	No IPR available	PANTHER	PTHR18034:SF3	PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG	coord: 372..951
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 410..651

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00230.1	Cp4.1LG04g00230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006417	regulation of translation
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003723	RNA binding