Cp4.1LG04g00140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g00140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Interleukin-1 receptor accessory-like 1-A isoform X3
Location	Cp4.1LG04: 2064795 .. 2065951 (+)
RNA-Seq Expression	Cp4.1LG04g00140
Synteny	Cp4.1LG04g00140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCACCACACTAATTACAACCTTAATCTCTCATTTATTTTCTTCTTTGATCTTTCTCTCCTCACAAGAGGGAAAGATCTTCATTTCTTGTCATATTTTTCTTCCTCGGTTGTTCTTCCTACCATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTTGATACGGCCGTCATCCCTGCACCCGAGCGTGTTGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCATCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGATTCCTTGCTCGTTGAGGTATAATCCTAATTCATATTCAAAGTCATTTCTATTTATTTTCTAATATGCATTGCCTTCTACAGAAGGAAGCTGAAGTTTCGAGCGTGACGAAGGCGGAGGAGCAGCCACCGAAGGGGGCGGCGGCGGTGACGGGGGCGGAAGAAGTGAAGAAGAGTGAAGAGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGAAGAAATAAAAGGCAAGCGTTATTAGTAACAGCGACAACGAAGTTGTTTTATTGATCGCTTTATTGATCTTAGCTTCTTAGCTATTCATTATTCAATTTGCGTAATGTTTTATGTAATGGTGTGGGGGTCTGGTCTGTGTTTCCTTTATCAAAATATAGTAATTAAAAGTATATTGAAGCCTATTAATTAATAGCATGATATTGTCCACT

mRNA sequence

TGCCCACCACACTAATTACAACCTTAATCTCTCATTTATTTTCTTCTTTGATCTTTCTCTCCTCACAAGAGGGAAAGATCTTCATTTCTTGTCATATTTTTCTTCCTCGGTTGTTCTTCCTACCATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTTGATACGGCCGTCATCCCTGCACCCGAGCGTGTTGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCATCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGATTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTTCGAGCGTGACGAAGGCGGAGGAGCAGCCACCGAAGGGGGCGGCGGCGGTGACGGGGGCGGAAGAAGTGAAGAAGAGTGAAGAGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGAAGAAATAAAAGGCAAGCGTTATTAGTAACAGCGACAACGAAGTTGTTTTATTGATCGCTTTATTGATCTTAGCTTCTTAGCTATTCATTATTCAATTTGCGTAATGTTTTATGTAATGGTGTGGGGGTCTGGTCTGTGTTTCCTTTATCAAAATATAGTAATTAAAAGTATATTGAAGCCTATTAATTAATAGCATGATATTGTCCACT

Coding sequence (CDS)

ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTTGATACGGCCGTCATCCCTGCACCCGAGCGTGTTGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCATCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGCCAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGATTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTTCGAGCGTGACGAAGGCGGAGGAGCAGCCACCGAAGGGGGCGGCGGCGGTGACGGGGGCGGAAGAAGTGAAGAAGAGTGAAGAGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA

Protein sequence

MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKSEEKAAKKDEKSA

Homology

[Close]

BLAST of Cp4.1LG04g00140 vs. NCBI nr
Match: XP_023531836.1 (coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430 bits (1106), Expect = 8.83e-151
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP
Sbjct: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
           RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD
Sbjct: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
           SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS
Sbjct: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240

Query: 241 EEKAAKKDEKSA 252
           EEKAAKKDEKSA
Sbjct: 241 EEKAAKKDEKSA 252

[Close]

BLAST of Cp4.1LG04g00140 vs. NCBI nr
Match: KAG6588522.1 (hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288 bits (738), Expect = 2.33e-95
Identity = 191/254 (75.20%), Postives = 193/254 (75.98%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDSAKP SLDSAKP SLDSAKP SLDS KPRSLDS KPRSLDS KPRSLDS KP
Sbjct: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
           RSLD  KPRSLDS KPRSLDS KPRSLDS KPRSLDS                       
Sbjct: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDS----------------------- 180

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGA--EEVK 240
                            DKPRSLDSLLVEKEAEV S+TKAEEQPPK AAA  GA  +EVK
Sbjct: 181 -----------------DKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAAAGAGAKEVK 213

Query: 241 KSEEKAAKKDEKSA 252
            SE KAAKKDEKSA
Sbjct: 241 -SEAKAAKKDEKSA 213

[Close]

BLAST of Cp4.1LG04g00140 vs. NCBI nr
Match: KAG7022371.1 (hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214 bits (546), Expect = 6.23e-67
Identity = 152/252 (60.32%), Postives = 154/252 (61.11%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDSAKP SLDSAKPTSLDSAKP SLDS KPRSLDS KPRSLDS           
Sbjct: 61  EAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLDSDKPRSLDS----------- 120

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 163

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
                            DKPRSLDSLLVEKEAEV S+TKAEEQPPK AAAV GA+EVK S
Sbjct: 181 -----------------DKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVK-S 163

Query: 241 EEKAAKKDEKSA 252
           E KAAKKDEKSA
Sbjct: 241 EAKAAKKDEKSA 163

[Close]

BLAST of Cp4.1LG04g00140 vs. NCBI nr
Match: XP_022970143.1 (uncharacterized protein LOC111469128 [Cucurbita maxima])

HSP 1 Score: 144 bits (362), Expect = 1.44e-39
Identity = 115/244 (47.13%), Postives = 117/244 (47.95%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVD VIDEK  DDTE VVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDGVIDEK--DDTENVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDSAKP SLDSA P SLDSAKP SLDS                           
Sbjct: 61  EAKPPSLDSAKPPSLDSATPPSLDSAKPPSLDS--------------------------- 120

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 130

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
                                    LLVEK+AEV SVTKAEEQPPKG A V GAEEVKK+
Sbjct: 181 -------------------------LLVEKQAEVPSVTKAEEQPPKGTAVVAGAEEVKKN 130

Query: 241 EEKA 244
           E  A
Sbjct: 241 ERSA 130

[Close]

BLAST of Cp4.1LG04g00140 vs. NCBI nr
Match: XP_022931727.1 (patellin-1-like [Cucurbita moschata])

HSP 1 Score: 132 bits (332), Expect = 3.06e-35
Identity = 110/252 (43.65%), Postives = 112/252 (44.44%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDS                                                   
Sbjct: 61  EAKPPSLDS--------------------------------------------------- 116

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 116

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
                                    LLVEKEAEV SVTKAEEQPPK AAAV GA+EVKKS
Sbjct: 181 -------------------------LLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKS 116

Query: 241 EEKAAKKDEKSA 252
           EEKAAK+DEKSA
Sbjct: 241 EEKAAKRDEKSA 116

[Close]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL
Match: A0A6J1I303 (uncharacterized protein LOC111469128 OS=Cucurbita maxima OX=3661 GN=LOC111469128 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 6.98e-40
Identity = 115/244 (47.13%), Postives = 117/244 (47.95%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVD VIDEK  DDTE VVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDGVIDEK--DDTENVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDSAKP SLDSA P SLDSAKP SLDS                           
Sbjct: 61  EAKPPSLDSAKPPSLDSATPPSLDSAKPPSLDS--------------------------- 120

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 130

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
                                    LLVEK+AEV SVTKAEEQPPKG A V GAEEVKK+
Sbjct: 181 -------------------------LLVEKQAEVPSVTKAEEQPPKGTAVVAGAEEVKKN 130

Query: 241 EEKA 244
           E  A
Sbjct: 241 ERSA 130

[Close]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL
Match: A0A6J1EUI1 (patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 1.48e-35
Identity = 110/252 (43.65%), Postives = 112/252 (44.44%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120
           EAKPPSLDS                                                   
Sbjct: 61  EAKPPSLDS--------------------------------------------------- 116

Query: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 116

Query: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGAEEVKKS 240
                                    LLVEKEAEV SVTKAEEQPPK AAAV GA+EVKKS
Sbjct: 181 -------------------------LLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKS 116

Query: 241 EEKAAKKDEKSA 252
           EEKAAK+DEKSA
Sbjct: 241 EEKAAKRDEKSA 116

[Close]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL
Match: A0A210PG78 (A-kinase anchor protein 5 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT16796 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 9.86e-23
Identity = 65/138 (47.10%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 67  LDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSA 126
           LD+A PTS+D+A P S+++A P S+D+A P S+D+A   S+D+A P S+D+A P S+D A
Sbjct: 70  LDNAAPTSVDNAAPASVETAGPASVDNAGPASVDNAGTASVDNAAPASVDNAAPASVDKA 129

Query: 127 KPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRS 186
            P S+D+A P S+D+A P S+D+A P S+D+A P S+D A P S+D+A P S+D+A   S
Sbjct: 130 APASVDNAAPASMDTAAPASVDTAAPASVDNAAPASVDKAAPASVDNAAPASMDTAAHAS 189

Query: 187 LDSAKPRSLDSDKPRSLD 204
           +D+A   S+ +  P S+D
Sbjct: 190 VDTAAHASVGTAVPASMD 207

[Close]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL
Match: A0A3S4UNU3 (Uncharacterized protein OS=Rodentibacter pneumotropicus OX=758 GN=NCTC8284_01419 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.20e-21
Identity = 74/146 (50.68%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 63  KPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRS 122
           KP SL + KPTSL + KPTSL + KP SL + KP SL + KP SL + KP SL + KP S
Sbjct: 41  KPTSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPTS 100

Query: 123 LDSAKPRSLDSAKPRSLDSA-----KPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPR 182
           L + KP SL + KP SL +      KP SL + KP SL + KP SL + KP SL + KP 
Sbjct: 101 LQAYKPTSLQAYKPTSLQAYSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPTSLQAYKPT 160

Query: 183 SLDSAKPRSLDSAKPRSLDSDKPRSL 203
           SL + KP SL + KP SL + KP SL
Sbjct: 161 SLQAYKPTSLQAYKPTSLQAYKPTSL 186

[Close]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL
Match: A0A6F9B383 (Uncharacterized protein OS=Coregonus sp. 'balchen' OX=861768 GN=CSTEINMANNI_LOCUS2173748 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.29e-20
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 88  PRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSL 147
           PR LD+  PR LD+  PR LD+  PR LD+  PR LD+  PR LD+  PR LD+  PR L
Sbjct: 43  PRHLDTMPPRHLDTMPPRHLDTMPPRHLDTMPPRHLDTMPPRHLDTMPPRHLDAMPPRHL 102

Query: 148 DSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSDKPRSLDSL 206
           D+  PR LD+  PR LD+  PR LD+  PR LD+  PR LD+  PR  D+  PR LD++
Sbjct: 103 DAMPPRHLDAMPPRHLDTMPPRHLDTMPPRHLDTMPPRHLDTMPPRHPDTMPPRHLDTM 161

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00140 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g00140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531836.1	8.83e-151	100.00	coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo]	[more]
KAG6588522.1	2.33e-95	75.20	hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7022371.1	6.23e-67	60.32	hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022970143.1	1.44e-39	47.13	uncharacterized protein LOC111469128 [Cucurbita maxima]	[more]
XP_022931727.1	3.06e-35	43.65	patellin-1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I303	6.98e-40	47.13	uncharacterized protein LOC111469128 OS=Cucurbita maxima OX=3661 GN=LOC111469128...	[more]
A0A6J1EUI1	1.48e-35	43.65	patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1	[more]
A0A210PG78	9.86e-23	47.10	A-kinase anchor protein 5 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT16796 PE...	[more]
A0A3S4UNU3	1.20e-21	50.68	Uncharacterized protein OS=Rodentibacter pneumotropicus OX=758 GN=NCTC8284_01419...	[more]
A0A6F9B383	2.29e-20	49.58	Uncharacterized protein OS=Coregonus sp. 'balchen' OX=861768 GN=CSTEINMANNI_LOCU...	[more]

BLAST of Cp4.1LG04g00140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00140.1	Cp4.1LG04g00140.1	mRNA