Cp4.1LG03g18070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGGAGGACCATCCAATTTCAATACTCGTGGCTCCCGCAGGCGGCAGCGCCGGAGGCAGAATCAGAAACAGCCGTCACAAGCGCAGTTTCCGGCTGCGCCACATTTGAATCCCAATGTCCCGGTTCAAAATCTTAATCTTCCTCTTCAAAATCGTAATGTGTTCATTCCTGGTCACCAGAACGTTAACTTCCCTATGCAGAACTCGAACTTGCCGGAGCAAAATCTTGGGTTTCAGTTCTCTCAGCCTCCCAGTCCAGGTTTCCGATTTCGTCAACCTTCCAGAACAGGTTTCCAGCCGCAAAGTTCGACTACGAAGTCAGCAGAAGGAATCGCGAGGATCAACCACGCTGTAGCCAAGGCACACAGCGATCTTCTTGTGGCTGGGGAAAGCATCTCAGCTTGGAAGGTCTCGCAATTAGCGCTTTCAATTCTCCAGGTCGATTCCTGGGATTATTTGGGGTTCCGTATGCAGGAAGTCGATGCTCTTCACCGCCTCATTGTGATGGAAGGGAAGGTAACGTGA ATGTACGGAGGACCATCCAATTTCAATACTCGTGGCTCCCGCAGGCGGCAGCGCCGGAGGCAGAATCAGAAACAGCCGTCACAAGCGCAGTTTCCGGCTGCGCCACATTTGAATCCCAATGTCCCGGTTCAAAATCTTAATCTTCCTCTTCAAAATCGTAATGTGTTCATTCCTGGTCACCAGAACGTTAACTTCCCTATGCAGAACTCGAACTTGCCGGAGCAAAATCTTGGGTTTCAGTTCTCTCAGCCTCCCAGTCCAGGTTTCCGATTTCGTCAACCTTCCAGAACAGGTTTCCAGCCGCAAAGTTCGACTACGAAGTCAGCAGAAGGAATCGCGAGGATCAACCACGCTGTAGCCAAGGCACACAGCGATCTTCTTGTGGCTGGGGAAAGCATCTCAGCTTGGAAGGTCTCGCAATTAGCGCTTTCAATTCTCCAGGTCGATTCCTGGGATTATTTGGGGTTCCGTATGCAGGAAGTCGATGCTCTTCACCGCCTCATTGTGATGGAAGGGAAGGTAACGTGA ATGTACGGAGGACCATCCAATTTCAATACTCGTGGCTCCCGCAGGCGGCAGCGCCGGAGGCAGAATCAGAAACAGCCGTCACAAGCGCAGTTTCCGGCTGCGCCACATTTGAATCCCAATGTCCCGGTTCAAAATCTTAATCTTCCTCTTCAAAATCGTAATGTGTTCATTCCTGGTCACCAGAACGTTAACTTCCCTATGCAGAACTCGAACTTGCCGGAGCAAAATCTTGGGTTTCAGTTCTCTCAGCCTCCCAGTCCAGGTTTCCGATTTCGTCAACCTTCCAGAACAGGTTTCCAGCCGCAAAGTTCGACTACGAAGTCAGCAGAAGGAATCGCGAGGATCAACCACGCTGTAGCCAAGGCACACAGCGATCTTCTTGTGGCTGGGGAAAGCATCTCAGCTTGGAAGGTCTCGCAATTAGCGCTTTCAATTCTCCAGGTCGATTCCTGGGATTATTTGGGGTTCCGTATGCAGGAAGTCGATGCTCTTCACCGCCTCATTGTGATGGAAGGGAAGGTAACGTGA MYGGPSNFNTRGSRRRQRRRQNQKQPSQAQFPAAPHLNPNVPVQNLNLPLQNRNVFIPGHQNVNFPMQNSNLPEQNLGFQFSQPPSPGFRFRQPSRTGFQPQSSTTKSAEGIARINHAVAKAHSDLLVAGESISAWKVSQLALSILQVDSWDYLGFRMQEVDALHRLIVMEGKVT Homology
BLAST of Cp4.1LG03g18070 vs. ExPASy Swiss-Prot
Match: F4JTS8 (Protein NO VEIN OS=Arabidopsis thaliana OX=3702 GN=NOV PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy Swiss-Prot
Match: A0A1P8ARG1 (Protein NO VEIN-LIKE OS=Arabidopsis thaliana OX=3702 GN=NVL PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.2e-07 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. NCBI nr
Match: XP_023526972.1 (uncharacterized protein LOC111790338 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 342 bits (877), Expect = 2.57e-105 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. NCBI nr
Match: KAG6582478.1 (Protein NO VEIN, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330 bits (846), Expect = 1.36e-102 Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. NCBI nr
Match: KAG7018865.1 (hypothetical protein SDJN02_20738, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 328 bits (840), Expect = 2.43e-100 Identity = 166/175 (94.86%), Postives = 170/175 (97.14%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. NCBI nr
Match: XP_022924459.1 (uncharacterized protein LOC111431955 isoform X1 [Cucurbita moschata]) HSP 1 Score: 324 bits (831), Expect = 3.95e-99 Identity = 164/175 (93.71%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. NCBI nr
Match: XP_023526973.1 (uncharacterized protein LOC111790338 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275 bits (704), Expect = 4.78e-82 Identity = 147/175 (84.00%), Postives = 148/175 (84.57%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy TrEMBL
Match: A0A6J1E990 (uncharacterized protein LOC111431955 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431955 PE=4 SV=1) HSP 1 Score: 324 bits (831), Expect = 1.91e-99 Identity = 164/175 (93.71%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy TrEMBL
Match: A0A6J1EF31 (uncharacterized protein LOC111431955 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431955 PE=4 SV=1) HSP 1 Score: 260 bits (665), Expect = 4.08e-77 Identity = 139/175 (79.43%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy TrEMBL
Match: A0A6J1E9I3 (uncharacterized protein LOC111431955 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431955 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 1.68e-75 Identity = 137/175 (78.29%), Postives = 141/175 (80.57%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy TrEMBL
Match: A0A6J1IHX9 (uncharacterized protein LOC111473852 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473852 PE=4 SV=1) HSP 1 Score: 218 bits (554), Expect = 3.49e-62 Identity = 122/179 (68.16%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. ExPASy TrEMBL
Match: A0A6J1FJE1 (uncharacterized protein LOC111446266 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446266 PE=4 SV=1) HSP 1 Score: 214 bits (544), Expect = 7.72e-61 Identity = 119/181 (65.75%), Postives = 131/181 (72.38%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. TAIR 10
Match: AT4G13750.1 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-09 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of Cp4.1LG03g18070 vs. TAIR 10
Match: AT1G08300.1 (no vein-like ) HSP 1 Score: 55.5 bits (132), Expect = 5.1e-08 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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