Cp4.1LG03g18000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g18000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Location	Cp4.1LG03: 12360127 .. 12365238 (+)
RNA-Seq Expression	Cp4.1LG03g18000
Synteny	Cp4.1LG03g18000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGTAAAAATTATATAAATTACGCGGTGAAAATTGATTTAAGTCAATAATTTAGAGGTAAAAATTGAATTTTTTACTATATATTTTTAAAACTCCTTCTGCTTCTCAATTACGCGGGCAAAATCTTGCATCCAAAGCCCATTATTCAAGCGCTCGCCACGGGGATACTAAAAATTCTCTCCACTTCTCTCTCGTTTTGAGTTTCGCTCAGGGGAATAACGCGAGGAATCTCTCTCGGTTCTGTGCGAATTCCGGCTGTCGATGGAGAAAACAATGCCGGAATCGATGGAAGCTACACCGTCTGTGTCTTCAAGCCTCGATCTCCAAGCAGTTCGCAGGTTTCTCTCTGTCTTGTTTCTGTGTGCACTAATTACGTGTAGCAATGTATAATCCGACGTCATTTTTACTTAAACTGAAGTCGCATCAGCGAGCTAGAAGAGTTGCAGAGATCTTTGGAGGAAGATGAAGCTTATTGCACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAATGCGCTCTCCATCTCGAGGTTTTCTATTGCCGATTATTTTACTTTTCTACATCCCTTACTTTTTCTCTCTCGTGTTGAAAGAAAAACTCGTGGCTCTTATTCTTTGAAATGTGCAGAGCAGGCTGCAGCAGGTTCTGTCAGAATGCTCTAACGTTGATAGTTTCTTGAGGATTGATGATTTAGGTAATTCTGTTAAGCTTACTTATGAATTTACTATGGTTTGAATGCATTTATGTGTGCATTTCACAATTTCGTCCTCCATTCTGTTAGATGAATTTTCCTTCATTTTAGTAACTGCTACTAGATTAATGATTTATGTTTCCTTTCCTGCGCTTTGATCGATTTCTCCAATGTTTTTTTTCCTTCACAACTTTTTAAATCTCTTTCTAGATGCATATGTGGAACACATGAAAGAGGAACTCGTTGCGGTGGAAGCTGAAAGCAGCAAAATCTCTAATGAGATAGAGGTTCTTAAGAGAACCAATATAGAAGGCAATCTCTTCGTTTATGTTTTGATTTATACTTTTTAGCCTCCTATTTGTACTGACGTCCTTCTTTTGCTTCCGATCACAGGTTCTAATAAATTAGAGGTGGATCTCGAATTATTAAATGTGTCGTTAGATCGTTTTACATCACAGGTTAGTCTCCATTGCAAAACAGTTTGTACGACACCAACAGTTACTAGACTAGGATGAGCGGAGGAAGACAATGATTTAACTTAAATTTTCTTAAAAGTTGCCTGACTTAAATGTTGAAAAGAATTAAATCCAACTATGGAAGGTGTTTGTGACTTGTATTCATTTCAGTAATTGGGCGAATGAGAAATTAGGGCAAAAACCAGATGGATGAAGGTCGAGGAAGTGTAATATCTGAAATTTTTAGACGAACTCATATTATGTAGGCTCTTGCTCCTTACGTTATTTAAAGAAAATAAACTGTACAATATATTGGATTAGATATTCTGCCAAGCTGTTTCGAGACATTACTACTAATGTTTGATTTTTCCTTCCGTCTTTGTTGTTGTTGATTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATGATTTAAGTTCACTTTTTCCTTATTTTCAATTTGATTTTGAGGTTTGATTTTCTCTATTATTTTTGGCGTATGATCAACATAGCTTGTTTATAGGCCTAATAAAAGTTCCTCCCTTGTGAGAATGTCTGTCACCATGTTCTCTTCATTACAATCTTGCAGGATCCTGAGAATGAAACATTTAATTTCTGCTCTATGAACGGTGAAGACCAAATGAACGTGATAGTTGACCCTGAATGCAATGCTTTTGAGGTCTTTTCTATTACCTTATTACTTCTAACTTTGTTTTTATTGTCACATGTTCTTTTTATTCAATTTTGATCAATTATAAGCACGTTTCTAGGGAGCAGTCGATCTAATGAGCTTAATTAAGCCATGGTTCCATTTACTGTTTCAATCATGGTATTGTAGCTCAATGAAAAACTATATGTGGTTTGACTAATTCTGAAGTTGTTCTTTTCTTCGAAACTCTTTATGCTTCTTCCAGGTTTTGGAACTTGATAGTCATATTGAGAAGAATAAAAGAATCCTGAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGGTAATATGTGTTTTGAGGTTTTAATTTTTGTATCCAAATCTCCCGACCTTCAAACCTCTTCAGTTATGCAACTTAGTTATGACTTTAAACCACTTCTCCCGATCCAATTGTTCATCTTGCCCTCAGGTTTGAAATATCATAAATCTGAAAATTTTCTCTTTGTTGAATCCTCCTTCCCTCGGAGCATGAAACCTTCGTTTTATAAAATGGATTATGATTATGCCACGATCCTAAAGGGAGTTGCCATGGCGCTGCCCTCGATTTAGGCAGAAATTAAAATTTTGGAGTGCCATGACCTCATAAGGGAATTGTCATGGTGTTGTGCTGTAGCATCACTGCGCCTTCTTGTAGTGCTCTTTTCTTGCCTTTTCTTTGTTCTGCAGAGCCCCACGATTCTGTAACAACCACCTAGGCACCATTCTCTTGCCGCCTTTGTATGGTCTTCTTCTTGCACACAGGCTGATTTTTCTCTAAATATCTCTTAAAACCTTCACTTTCTCTACTTGTTTTTGTTCTACACAATAAAAATTCACGTGCACAAATCTGACACAATCAACACAAAACTAACAGTAATCAAGTTATAATCCTTATGAATTATAGCCCACTAAGTGCTATCAATCTAGTAATGACTTCTCTCTCCCTCCCTCCTCATAACTCTCTCCCTCTAGTTTGGATGTTGTTGAACAGGTTGAGGACACAATTGGAGGTCTGAAGGTCATTGATGTTGCTGATAATTTCATTAGATTGTCATTACGTACACATATTCCAAACTTGGAAGATTTTTCAAGCTTACAGAAACTTGAAGGAATGATCGAGCCATCGGAATTGAATCACGAGTTGCTAATAGAAGTTTTGGAAGGAACAATGGAGCTAAAGAATGCCGAGGTATCCCTTTAATTGGTTATGTATCGTAACTAATTGTATCCACGGTTATCATGGTCTAGTTCTTATTAGAGTTTAAAATCCAAGTAATTCCATCTGTTGGCACCTCTCTCTCTCCCATCAATGTAAATTCTGTTGACGGAGCTTAATTCATTAGTATTTTCACAGATCTTTCCTGGTGATGTCCACTTGCACGATATCATCAATGCTTCAAAGTCAGTCAGGTTTGTTTTCTATAAGATTCATGTATACTCACACTGTACTCAAGAATAATTGAAGAGGTTGGTCTTTTATTTTACAGTAGTATAGCACTGACAATGTTACATACTTATAGTCTTATTCGTTTACATATTCTTGTTAGATGTCAATTTGATCTACCTGCTTTATTAACTGGCGTTGTACAACTTTCACCAATTATATTGGTTTGCTGGAATCATAGATGAAACTGTTTGAGTTGAATTGCAATGACATGAGGGATAATAATATGTAACTCAAAAAAGCATATAATAGTGACATCACCTCTATTTATACGTAATTGTAATGATTTGGTCATAAATTTTCCAGACTTTTTACTTATTGAACAGAATGCAATTTATCTGACCCGTTCATTTTGCTTTTGACTGAGCAGCAATTCATTGGAATGGTTTGTGAAAAAAGTACAAGATAGAATTGTTTTGTGTACTCTTAGGCGATTTGTTGTGAAGAGTGCAAACAAGTCAAGGTGAGACTCGTAAAATTTTCAGATCTTTTGTATAATTAGAAGTAATGTATAAGATAGGTTTTTCTTTTTTGTCTTTTTTCATTTTGTGGAGTACTCTCTATGTCCATAAAGGAATTTCCCAACCCATATTTCCCATTTTCGAAAATGACTCGGGATGGGGAATGCACTATCTTTCGCTTCCCTTACTTCCCTCTTTTCTCCTTCCTTCGTTCCTAGCCATCCAGTTAGATATGTACAGAAAATTCTTTCCGCTGGGATCATACTTTCTCCTTTCGAGTCACTTTTGGCTACCATTGAATTCTTGGTAGATAGGGTTTCCTAGGCCCCTAGGCTGGGATAGGTTGCTTTCAGTCCTCCTTCCTATACAACCGCTTAACAGCCTTTGCATACAAGTAGATCGCTATGCACGACTTCTTGGTAAGACTATCAGCAGCCACTAATCATCATTATTGCCTTACTTCATCATCGTATTTGAGAGTAAAGTAATGTAATTCTATATTTTAGTTGTTTTTGGGACTGAAATGCTTACTCTTGATGCAGTCATTCCTTTGATTACATAGACCAAGACGAAACGATAGTATGTTCTATGATTGGAGGGATTGATGCGTTTATTAAGGTGTCTCAAGGCTGGCCACTAGCCGATTCTCCACTGAAACTTGTATCACTCAAGAGCTCAGACCATTATACAAAAGGTGCTTCCTTAAGCCTCGTTTGCAAGGTGGAGGTAAGATGGATATTTTTAGTTTTTGTTCATTGTCTTTGCCTCTCTTTGATACCTAAAAAGGGCTTTGGTAAATCAAATTATTTTTACTTTTTTATTTTTATTTTTCTATGGTTATCATTAGGGTATTACGTGCATATTCATAATCCGATTATGTTTGCACCCTTCAGAAAATGGCAAATTCCTTGGACGCACGTATTCGCCAAAATCTATCAAGCTTTGCAGACGCTGTTGAAAAAATATTGAAGGAGCAAATGCATTTAGAACTCCAAGCTGACAGTGGTCTTTGACGATTAAGAACTTTGGTTCATCATGCAATTCAGGTTTCTCAATTCTACATCCTCTACTAGTATAAGTATCACGTGATATTGCTGTTGATGATTTTTCATGCCGAAAATTTTAGCTCGATTATTGATTGCTATTATTATTATTATTTGCCCTTTTGTGTGTATAGGCTTAAAATATTGTTGTTTTGTTTATTTATTGTTATTATTTTTGTATAATTGGGATATCCAAAGCCCATCCCAGTAGTTTATAGAGGACTTGGGGAGGCGACAAGTGGTTAATTTTAGGCTAAATCATAAAAATAAAAATAAAAAGTCC

mRNA sequence

AATGGTAAAAATTATATAAATTACGCGGTGAAAATTGATTTAAGTCAATAATTTAGAGGTAAAAATTGAATTTTTTACTATATATTTTTAAAACTCCTTCTGCTTCTCAATTACGCGGGCAAAATCTTGCATCCAAAGCCCATTATTCAAGCGCTCGCCACGGGGATACTAAAAATTCTCTCCACTTCTCTCTCGTTTTGAGTTTCGCTCAGGGGAATAACGCGAGGAATCTCTCTCGGTTCTGTGCGAATTCCGGCTGTCGATGGAGAAAACAATGCCGGAATCGATGGAAGCTACACCGTCTGTGTCTTCAAGCCTCGATCTCCAAGCAGTTCGCAGCTAGAAGAGTTGCAGAGATCTTTGGAGGAAGATGAAGCTTATTGCACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAATGCGCTCTCCATCTCGAGAGCAGGCTGCAGCAGGTTCTGTCAGAATGCTCTAACGTTGATAGTTTCTTGAGGATTGATGATTTAGATGCATATGTGGAACACATGAAAGAGGAACTCGTTGCGGTGGAAGCTGAAAGCAGCAAAATCTCTAATGAGATAGAGGTGGATCTCGAATTATTAAATGTGTCGTTAGATCGTTTTACATCACAGGATCCTGAGAATGAAACATTTAATTTCTGCTCTATGAACGGTGAAGACCAAATGAACGTGATAGTTGACCCTGAATGCAATGCTTTTGAGGTTTTGGAACTTGATAGTCATATTGAGAAGAATAAAAGAATCCTGAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGTTTGGATGTTGTTGAACAGGTTGAGGACACAATTGGAGGTCTGAAGGTCATTGATGTTGCTGATAATTTCATTAGATTGTCATTACGTACACATATTCCAAACTTGGAAGATTTTTCAAGCTTACAGAAACTTGAAGGAATGATCGAGCCATCGGAATTGAATCACGAGTTGCTAATAGAAGTTTTGGAAGGAACAATGGAGCTAAAGAATGCCGAGATCTTTCCTGGTGATGTCCACTTGCACGATATCATCAATGCTTCAAAGTCAGTCAGCAATTCATTGGAATGGTTTGTGAAAAAAGTACAAGATAGAATTGTTTTGTGTACTCTTAGGCGATTTGTTGTGAAGAGTGCAAACAAGTCAAGTCATTCCTTTGATTACATAGACCAAGACGAAACGATAGTATGTTCTATGATTGGAGGGATTGATGCGTTTATTAAGGTGTCTCAAGGCTGGCCACTAGCCGATTCTCCACTGAAACTTGTATCACTCAAGAGCTCAGACCATTATACAAAAGGTGCTTCCTTAAGCCTCGTTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGACGCACGTATTCGCCAAAATCTATCAAGCTTTGCAGACGCTGTTGAAAAAATATTGAAGGAGCAAATGCATTTAGAACTCCAAGCTGACAGTGGTCTTTGACGATTAAGAACTTTGGTTCATCATGCAATTCAGGTTTCTCAATTCTACATCCTCTACTAGTATAAGTATCACGTGATATTGCTGTTGATGATTTTTCATGCCGAAAATTTTAGCTCGATTATTGATTGCTATTATTATTATTATTTGCCCTTTTGTGTGTATAGGCTTAAAATATTGTTGTTTTGTTTATTTATTGTTATTATTTTTGTATAATTGGGATATCCAAAGCCCATCCCAGTAGTTTATAGAGGACTTGGGGAGGCGACAAGTGGTTAATTTTAGGCTAAATCATAAAAATAAAAATAAAAAGTCC

Coding sequence (CDS)

ATGAAAGAGGAACTCGTTGCGGTGGAAGCTGAAAGCAGCAAAATCTCTAATGAGATAGAGGTGGATCTCGAATTATTAAATGTGTCGTTAGATCGTTTTACATCACAGGATCCTGAGAATGAAACATTTAATTTCTGCTCTATGAACGGTGAAGACCAAATGAACGTGATAGTTGACCCTGAATGCAATGCTTTTGAGGTTTTGGAACTTGATAGTCATATTGAGAAGAATAAAAGAATCCTGAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGTTTGGATGTTGTTGAACAGGTTGAGGACACAATTGGAGGTCTGAAGGTCATTGATGTTGCTGATAATTTCATTAGATTGTCATTACGTACACATATTCCAAACTTGGAAGATTTTTCAAGCTTACAGAAACTTGAAGGAATGATCGAGCCATCGGAATTGAATCACGAGTTGCTAATAGAAGTTTTGGAAGGAACAATGGAGCTAAAGAATGCCGAGATCTTTCCTGGTGATGTCCACTTGCACGATATCATCAATGCTTCAAAGTCAGTCAGCAATTCATTGGAATGGTTTGTGAAAAAAGTACAAGATAGAATTGTTTTGTGTACTCTTAGGCGATTTGTTGTGAAGAGTGCAAACAAGTCAAGTCATTCCTTTGATTACATAGACCAAGACGAAACGATAGTATGTTCTATGATTGGAGGGATTGATGCGTTTATTAAGGTGTCTCAAGGCTGGCCACTAGCCGATTCTCCACTGAAACTTGTATCACTCAAGAGCTCAGACCATTATACAAAAGGTGCTTCCTTAAGCCTCGTTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGACGCACGTATTCGCCAAAATCTATCAAGCTTTGCAGACGCTGTTGAAAAAATATTGAAGGAGCAAATGCATTTAGAACTCCAAGCTGACAGTGGTCTTTGA

Protein sequence

MKEELVAVEAESSKISNEIEVDLELLNVSLDRFTSQDPENETFNFCSMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGGLKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEIFPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDETIVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARIRQNLSSFADAVEKILKEQMHLELQADSGL

Homology

[Close]

BLAST of Cp4.1LG03g18000 vs. NCBI nr
Match: XP_023528068.1 (uncharacterized protein LOC111791098 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1539), Expect = 4.90e-213
Identity = 315/329 (95.74%), Postives = 315/329 (95.74%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLELLNVSLDRFTSQDPENETFNFC
Sbjct: 89  MKEELVAVEAESSKISNEIEVLKRTNIEGSNKLEVDLELLNVSLDRFTSQDPENETFNFC 148

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 149 SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 208

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 209 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 268

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 269 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 328

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 329 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 388

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLELQADSGL
Sbjct: 389 RQNLSSFADAVEKILKEQMHLELQADSGL 417

[Close]

BLAST of Cp4.1LG03g18000 vs. NCBI nr
Match: XP_023528067.1 (uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528069.1 uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1539), Expect = 5.47e-213
Identity = 315/329 (95.74%), Postives = 315/329 (95.74%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLELLNVSLDRFTSQDPENETFNFC
Sbjct: 92  MKEELVAVEAESSKISNEIEVLKRTNIEGSNKLEVDLELLNVSLDRFTSQDPENETFNFC 151

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 152 SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 211

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 212 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 271

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 272 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 331

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 332 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 391

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLELQADSGL
Sbjct: 392 RQNLSSFADAVEKILKEQMHLELQADSGL 420

[Close]

BLAST of Cp4.1LG03g18000 vs. NCBI nr
Match: XP_022980354.1 (uncharacterized protein LOC111479744 [Cucurbita maxima] >XP_022980355.1 uncharacterized protein LOC111479744 [Cucurbita maxima] >XP_022980356.1 uncharacterized protein LOC111479744 [Cucurbita maxima])

HSP 1 Score: 582 bits (1501), Expect = 1.19e-208
Identity = 308/329 (93.62%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLELLNVSLDRFTSQDPENETFNFC
Sbjct: 1   MKEELVAVEAESSKISNEIEVLKSTNIEGSNKLEVDLELLNVSLDRFTSQDPENETFNFC 60

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD ECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 61  SMNGEDQMNVIVDRECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVIDVADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 180

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIG IDAFIKVSQGWPLADSPLKLVSLK+SDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 241 IVCYMIGRIDAFIKVSQGWPLADSPLKLVSLKNSDHYTKGASLSLVCKVEKMANSLDARI 300

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAV+ ILKEQMHLELQADSGL
Sbjct: 301 RQNLSSFADAVKNILKEQMHLELQADSGL 329

[Close]

BLAST of Cp4.1LG03g18000 vs. NCBI nr
Match: KAG6582484.1 (hypothetical protein SDJN03_22486, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578 bits (1491), Expect = 1.11e-205
Identity = 307/329 (93.31%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLELL+VSLDRFTSQD E ETFNFC
Sbjct: 92  MKEELVAVEAESSKISNEIEVLKRTNIEGSNKLEVDLELLDVSLDRFTSQDTEKETFNFC 151

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD ECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 152 SMNGEDQMNVIVDCECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 211

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVI VADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 212 LKVIGVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 271

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 272 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 331

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 332 IVCCMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 391

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLELQAD GL
Sbjct: 392 RQNLSSFADAVEKILKEQMHLELQADGGL 420

[Close]

BLAST of Cp4.1LG03g18000 vs. NCBI nr
Match: XP_022924674.1 (uncharacterized protein LOC111432106 isoform X3 [Cucurbita moschata])

HSP 1 Score: 573 bits (1476), Expect = 2.13e-203
Identity = 304/329 (92.40%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESS+ISNEIEV              +LELL+VSLDRFTSQDPE ETFNFC
Sbjct: 92  MKEELVAVEAESSQISNEIEVLKRTNIEGSNKLEVNLELLDVSLDRFTSQDPEKETFNFC 151

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD E NAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 152 SMNGEDQMNVIVDRERNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 211

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVI VADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 212 LKVIGVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 271

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 272 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 331

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 332 IVCCMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 391

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLEL+AD GL
Sbjct: 392 RQNLSSFADAVEKILKEQMHLELEADGGL 420

[Close]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL
Match: A0A6J1ITD7 (uncharacterized protein LOC111479744 OS=Cucurbita maxima OX=3661 GN=LOC111479744 PE=4 SV=1)

HSP 1 Score: 582 bits (1501), Expect = 5.78e-209
Identity = 308/329 (93.62%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLELLNVSLDRFTSQDPENETFNFC
Sbjct: 1   MKEELVAVEAESSKISNEIEVLKSTNIEGSNKLEVDLELLNVSLDRFTSQDPENETFNFC 60

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD ECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 61  SMNGEDQMNVIVDRECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVIDVADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 180

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIG IDAFIKVSQGWPLADSPLKLVSLK+SDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 241 IVCYMIGRIDAFIKVSQGWPLADSPLKLVSLKNSDHYTKGASLSLVCKVEKMANSLDARI 300

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAV+ ILKEQMHLELQADSGL
Sbjct: 301 RQNLSSFADAVKNILKEQMHLELQADSGL 329

[Close]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL
Match: A0A6J1E9V8 (uncharacterized protein LOC111432106 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432106 PE=4 SV=1)

HSP 1 Score: 573 bits (1476), Expect = 1.03e-203
Identity = 304/329 (92.40%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESS+ISNEIEV              +LELL+VSLDRFTSQDPE ETFNFC
Sbjct: 92  MKEELVAVEAESSQISNEIEVLKRTNIEGSNKLEVNLELLDVSLDRFTSQDPEKETFNFC 151

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD E NAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 152 SMNGEDQMNVIVDRERNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 211

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVI VADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 212 LKVIGVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 271

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 272 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 331

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 332 IVCCMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 391

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLEL+AD GL
Sbjct: 392 RQNLSSFADAVEKILKEQMHLELEADGGL 420

[Close]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL
Match: A0A6J1ED63 (uncharacterized protein LOC111432106 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432106 PE=4 SV=1)

HSP 1 Score: 573 bits (1476), Expect = 1.07e-203
Identity = 304/329 (92.40%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESS+ISNEIEV              +LELL+VSLDRFTSQDPE ETFNFC
Sbjct: 93  MKEELVAVEAESSQISNEIEVLKRTNIEGSNKLEVNLELLDVSLDRFTSQDPEKETFNFC 152

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD E NAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 153 SMNGEDQMNVIVDRERNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 212

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVI VADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 213 LKVIGVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 272

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 273 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 332

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 333 IVCCMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 392

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLEL+AD GL
Sbjct: 393 RQNLSSFADAVEKILKEQMHLELEADGGL 421

[Close]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL
Match: A0A6J1E9M5 (uncharacterized protein LOC111432106 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432106 PE=4 SV=1)

HSP 1 Score: 573 bits (1476), Expect = 1.19e-203
Identity = 304/329 (92.40%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESS+ISNEIEV              +LELL+VSLDRFTSQDPE ETFNFC
Sbjct: 96  MKEELVAVEAESSQISNEIEVLKRTNIEGSNKLEVNLELLDVSLDRFTSQDPEKETFNFC 155

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGEDQMNVIVD E NAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG
Sbjct: 156 SMNGEDQMNVIVDRERNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 215

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKVI VADNFIRLSLRTHIPNLEDFSSLQ+LEGMIEPSELNHELLIEVLEGTMELKNAEI
Sbjct: 216 LKVIGVADNFIRLSLRTHIPNLEDFSSLQRLEGMIEPSELNHELLIEVLEGTMELKNAEI 275

Query: 181 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 240
           FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET
Sbjct: 276 FPGDVHLHDIINASKSVSNSLEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDET 335

Query: 241 IVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 300
           IVC MIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI
Sbjct: 336 IVCCMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDARI 395

Query: 301 RQNLSSFADAVEKILKEQMHLELQADSGL 315
           RQNLSSFADAVEKILKEQMHLEL+AD GL
Sbjct: 396 RQNLSSFADAVEKILKEQMHLELEADGGL 424

[Close]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL
Match: A0A5A7U6L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003710 PE=4 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 5.88e-183
Identity = 274/329 (83.28%), Postives = 294/329 (89.36%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIEV--------------DLELLNVSLDRFTSQDPENETFNFC 60
           MKEELVAVEAESSKISNEIEV              DLE+L +SLDRF SQDPE  TFN  
Sbjct: 86  MKEELVAVEAESSKISNEIEVLKRTTIEDSNKLKMDLEVLKLSLDRFASQDPEEATFNCS 145

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           SMNGED+MNVIVD ECNAFEVLEL+S IEKNK+ILKSLQEVDEIFKSLDV+EQVE TIGG
Sbjct: 146 SMNGEDRMNVIVDRECNAFEVLELESQIEKNKKILKSLQEVDEIFKSLDVIEQVEGTIGG 205

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           +KVIDVADN IRLSL THIPN+EDFS+LQ+LEG+IE SEL+HEL+IEV  GTMELKNAEI
Sbjct: 206 MKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLIEKSELDHELIIEVSNGTMELKNAEI 265

Query: 181 FPGDVHLHDIINASKSVSNS-LEWFVKKVQDRIVLCTLRRFVVKSANKSSHSFDYIDQDE 240
           FP DVHLHDIINASKS+SNS LEWFV+KVQDRIVLCTLRRF VKSANKSSHSF+Y+DQDE
Sbjct: 266 FPADVHLHDIINASKSISNSSLEWFVRKVQDRIVLCTLRRFAVKSANKSSHSFEYLDQDE 325

Query: 241 TIVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCKVEKMANSLDAR 300
            I+CSMIGGIDA IKVSQGWPLADSPLKL+SLKSSDHYTKG SLSL+CKVEKMANSLD R
Sbjct: 326 MIMCSMIGGIDACIKVSQGWPLADSPLKLISLKSSDHYTKGISLSLICKVEKMANSLDGR 385

Query: 301 IRQNLSSFADAVEKILKEQMHLELQADSG 314
           IRQNLSSFADAVEKILKEQMHLELQADSG
Sbjct: 386 IRQNLSSFADAVEKILKEQMHLELQADSG 414

[Close]

BLAST of Cp4.1LG03g18000 vs. TAIR 10
Match: AT3G23910.1 (BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2); Has 562 Blast hits to 532 proteins in 147 species: Archae - 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants - 85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI BLink). )

HSP 1 Score: 275.0 bits (702), Expect = 7.4e-74
Identity = 157/338 (46.45%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIE--------------VDLELLNVSLDRFTSQDPENETFNFC 60
           ++ EL +VEAES+K+S EIE               DLE L +SLD  +SQD E    N  
Sbjct: 82  LRNELQSVEAESAKVSEEIERLSQSHAQDSSRLQRDLEGLLLSLDSMSSQDVEKSKENQP 141

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           S +  +   VI D   + F++ EL++ +E+ + ILKSL+++D + K  D  EQVED + G
Sbjct: 142 SSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRKRFDAAEQVEDALTG 201

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKV++   NFIRL LRT+I  L+ F    K + + EPSEL HELLI + + T E+   E+
Sbjct: 202 LKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLIYLKDKTTEITKFEM 261

Query: 181 FPGDVHLHDIINASKS------------VSNSLEWFVKKVQDRIVLCTLRRFVVKSANKS 240
           FP D+++ DII A+ S              +S++W V KVQD+I+  TLR+++V S+   
Sbjct: 262 FPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDKIISTTLRKYIVMSSKTI 321

Query: 241 SHSFDYIDQDETIVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCK 300
            ++F+Y D+DETIV  + GGIDAF+KVS GWPL ++PLKL SLK+SD+ +KG SLSL+CK
Sbjct: 322 RYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGISLSLICK 381

Query: 301 VEKMANSLDARIRQNLSSFADAVEKILKEQMHLELQAD 313
           VE++ANSLD   RQNLS F DA+EKIL EQ   ELQ++
Sbjct: 382 VEELANSLDLETRQNLSGFMDAIEKILVEQTREELQSN 416

[Close]

BLAST of Cp4.1LG03g18000 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-70
Identity = 154/338 (45.56%), Postives = 216/338 (63.91%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIE--------------VDLELLNVSLDRFTSQDPENETFNFC 60
           ++ EL +VEAES+K+S EIE               DLE L +SLD  +SQD E    N  
Sbjct: 407 LRNELQSVEAESAKVSEEIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEKSKENQP 466

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           S +  +   VI D   + F++ EL++ +E+ + ILKSL+++D + K  D  EQVED + G
Sbjct: 467 SSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRKRFDAAEQVEDALTG 526

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKV++   NFIRL LRT+I  L+ F    K + + EPSEL HELLI + + T E+   E+
Sbjct: 527 LKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLIYLKDKTTEITKFEM 586

Query: 181 FPGDVHLHDIINASKS------------VSNSLEWFVKKVQDRIVLCTLRRFVVKSANKS 240
           FP D+++ DII A+ S              +S++W V KVQD+I+  TLR+  V S+   
Sbjct: 587 FPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDKIISTTLRKDFVMSSKTI 646

Query: 241 SHSFDYIDQDETIVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCK 300
            ++F+Y D+DETIV  + GGIDAF+KVS GWPL ++PLKL SLK+SD+ +KG SLSL+ K
Sbjct: 647 RYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGFSLSLISK 706

Query: 301 VEKMANSLDARIRQNLSSFADAVEKILKEQMHLELQAD 313
           +E++ANSLD   RQNLS F DAVEKIL +Q   EL+++
Sbjct: 707 LEELANSLDLETRQNLSGFMDAVEKILVQQTREELKSN 741

[Close]

BLAST of Cp4.1LG03g18000 vs. TAIR 10
Match: AT3G24255.2 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-70
Identity = 154/338 (45.56%), Postives = 216/338 (63.91%), Query Frame = 0


Query: 1   MKEELVAVEAESSKISNEIE--------------VDLELLNVSLDRFTSQDPENETFNFC 60
           ++ EL +VEAES+K+S EIE               DLE L +SLD  +SQD E    N  
Sbjct: 89  LRNELQSVEAESAKVSEEIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEKSKENQP 148

Query: 61  SMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILKSLQEVDEIFKSLDVVEQVEDTIGG 120
           S +  +   VI D   + F++ EL++ +E+ + ILKSL+++D + K  D  EQVED + G
Sbjct: 149 SSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRKRFDAAEQVEDALTG 208

Query: 121 LKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIEPSELNHELLIEVLEGTMELKNAEI 180
           LKV++   NFIRL LRT+I  L+ F    K + + EPSEL HELLI + + T E+   E+
Sbjct: 209 LKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLIYLKDKTTEITKFEM 268

Query: 181 FPGDVHLHDIINASKS------------VSNSLEWFVKKVQDRIVLCTLRRFVVKSANKS 240
           FP D+++ DII A+ S              +S++W V KVQD+I+  TLR+  V S+   
Sbjct: 269 FPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDKIISTTLRKDFVMSSKTI 328

Query: 241 SHSFDYIDQDETIVCSMIGGIDAFIKVSQGWPLADSPLKLVSLKSSDHYTKGASLSLVCK 300
            ++F+Y D+DETIV  + GGIDAF+KVS GWPL ++PLKL SLK+SD+ +KG SLSL+ K
Sbjct: 329 RYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGFSLSLISK 388

Query: 301 VEKMANSLDARIRQNLSSFADAVEKILKEQMHLELQAD 313
           +E++ANSLD   RQNLS F DAVEKIL +Q   EL+++
Sbjct: 389 LEELANSLDLETRQNLSGFMDAVEKILVQQTREELKSN 423

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g18000 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g18000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528068.1	4.90e-213	95.74	uncharacterized protein LOC111791098 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023528067.1	5.47e-213	95.74	uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022980354.1	1.19e-208	93.62	uncharacterized protein LOC111479744 [Cucurbita maxima] >XP_022980355.1 uncharac...	[more]
KAG6582484.1	1.11e-205	93.31	hypothetical protein SDJN03_22486, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924674.1	2.13e-203	92.40	uncharacterized protein LOC111432106 isoform X3 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG03g18000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITD7	5.78e-209	93.62	uncharacterized protein LOC111479744 OS=Cucurbita maxima OX=3661 GN=LOC111479744...	[more]
A0A6J1E9V8	1.03e-203	92.40	uncharacterized protein LOC111432106 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ED63	1.07e-203	92.40	uncharacterized protein LOC111432106 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E9M5	1.19e-203	92.40	uncharacterized protein LOC111432106 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7U6L2	5.88e-183	83.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG03g18000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23910.1	7.4e-74	46.45	BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse...	[more]
AT3G24255.1	2.2e-70	45.56	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G24255.2	2.2e-70	45.56	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36037	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEIN	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g18000.1	Cp4.1LG03g18000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane