Cp4.1LG03g16760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g16760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LIM domain-containing protein PLIM2c-like
Location	Cp4.1LG03: 13037731 .. 13039875 (-)
RNA-Seq Expression	Cp4.1LG03g16760
Synteny	Cp4.1LG03g16760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATGAAATAAAATAAAAGAGGTACTATATTTTTTTTTATTTAGAAATATATATTTTTAGCAATCTTTCCTCTCTCCATTTTTCTCTGAAAAAGCTGGAGTTCCTTTGAATTGGTCGACCGATTCGTCCTTTTCCCTCGAATTCAGCCCATTATGTCCAAAATTGGAGCGGATGGCAGTTGTGATTCAGAGTTTCTGACAGATTTGGATTCAGATTTCTGATGTATAAATTTGGTTTTGTAGTTAATCACTGGAAGCCTTTCATCTTGTCCCGTCGCATTCGAATTAATCTGGCAGACAAGGCTTCGGACGGCTTGGGGTTCTAATCGCCCTTGTTTTTTTCTTGGTTTCTGGGGGTGAATTCTTTCTTTTTTTTCCTTCTCCCGAAGTTCTTGGATCTCGGATCGAGTCCATCTTGTAAAAGAGTAATTTGCTTCGTAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTATTGTCTCTTGAAGGAATTCCTTACCACAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACTCTTTCGGTTAGTCTCTCTCAATTTGAAATCATCATTTCGTATTAGAACACTCGATTTTGGCGGATTTGATCCGAGTTCGTTGTCTATTACAGATGAGCAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTCGAGCAACTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAAGTAATACACATTTCTTTCCATTCTTCTATTTGTTCCTGTTTTACTTTTCCTTAATTTCCTGACATTCTCTCATTTCCATGGTATTGAATCACAACAGCCAAGCCTTCTGAGAAGCAAAGTGAACTGGTAGGCTCCCACTCTTTTCATTGTTCTTAGGTTTAGAAAACAGAAACTGCAAAATTCTGGTGTTTTACAATTTCATATCTAAGCTTATTAGGATTAAGTCTAAATGTTCTTCCAAATCCTGATTTTGAATATGCCATTCCTAATGTTGTTGATAAACACAAATTTTGTATGGTTGTGATTTTGTTTCAATTTAGGGCTTGCTCGAGTCTATTGGTTTGTATAATATGATCAATTATCATTCCTATGATCATTTTATCCTCATTTTATATTGATAGTTCATGAAATTTGAAGCTTGTGCTCTCCATGAAAATGCTGTAATTTTGATACAAATTTCATAATCTTTGACAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTGTAGTTCTTCCCTTTCTTTGATATCACATTGTTACTGGGTTGTTGTTGTCTGATTGAAACCTGCCACCTCTCAGGAATGAGATATAGAACGGGTTTGTAATGACTTTTTAAGTGCGTATAGAGGCGTTTCATGAACGTTGTTCGTCTGTTTTACGTAGTTTAAAAGAAAATGTTTTGTTTTATGGTTCAGTTTTCAAAGCAAATGATCTGTGATTGATGCGTTACATCTAGGTTCGTATATGGCTTGAGAAAATTGAAAATTGAAATGTATATATGGCTAAACAGGTGACTCTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACGGTTCATATGCTGCTCTTGATGGAGTATTGTACTGCAAGCACCATTTTTCTCAGCTGTTCATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAACGCCACACCCCCGGCCGATCGCGCCGAAGAAGATGCCGAGTCTCAGCCTCAATCCGAGGATCATGCAGTAGAGCAATCTTGAAATGCCTTTTCTGCTCTACCAGCATTTGAGAATTCTCTTCTTCTTCTTCTTCGCTTCATTCTTCTTATGAAACTACCAAATTTATTTTCTACTGGGAAAGAGAAACCAAAACCTTCACCATTTGTTTTTGTTCACATTCACATTGACTTCCTATTTATAATGTTGTAATTCAAGGCCCTATTTGTCAGCCTTGTACACACAGCTTTCAAAGAATTGCACCATAGTTTCTGTGTGAATGAGATTCTGGAATAAAATGCAGATCTTACC

mRNA sequence

TGGATGAAATAAAATAAAAGAGGTACTATATTTTTTTTTATTTAGAAATATATATTTTTAGCAATCTTTCCTCTCTCCATTTTTCTCTGAAAAAGCTGGAGTTCCTTTGAATTGGTCGACCGATTCGTCCTTTTCCCTCGAATTCAGCCCATTATGTCCAAAATTGGAGCGGATGGCAGTTGTGATTCAGAGTTTCTGACAGATTTGGATTCAGATTTCTGATGTATAAATTTGGTTTTGTAGTTAATCACTGGAAGCCTTTCATCTTGTCCCGTCGCATTCGAATTAATCTGGCAGACAAGGCTTCGGACGGCTTGGGGTTCTAATCGCCCTTGTTTTTTTCTTGGTTTCTGGGGGTGAATTCTTTCTTTTTTTTCCTTCTCCCGAAGTTCTTGGATCTCGGATCGAGTCCATCTTGTAAAAGAGTAATTTGCTTCGTAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTATTGTCTCTTGAAGGAATTCCTTACCACAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACTCTTTCGATGAGCAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTCGAGCAACTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAGCCTTCTGAGAAGCAAAGTGAACTGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACGGTTCATATGCTGCTCTTGATGGAGTATTGTACTGCAAGCACCATTTTTCTCAGCTGTTCATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAACGCCACACCCCCGGCCGATCGCGCCGAAGAAGATGCCGAGTCTCAGCCTCAATCCGAGGATCATGCAGTAGAGCAATCTTGAAATGCCTTTTCTGCTCTACCAGCATTTGAGAATTCTCTTCTTCTTCTTCTTCGCTTCATTCTTCTTATGAAACTACCAAATTTATTTTCTACTGGGAAAGAGAAACCAAAACCTTCACCATTTGTTTTTGTTCACATTCACATTGACTTCCTATTTATAATGTTGTAATTCAAGGCCCTATTTGTCAGCCTTGTACACACAGCTTTCAAAGAATTGCACCATAGTTTCTGTGTGAATGAGATTCTGGAATAAAATGCAGATCTTACC

Coding sequence (CDS)

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTATTGTCTCTTGAAGGAATTCCTTACCACAAGCATTGCTTCAAATGCAGCCACTGCAAAGGCACTCTTTCGATGAGCAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTCGAGCAACTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAACCAAGCCTTCTGAGAAGCAAAGTGAACTGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACGGTTCATATGCTGCTCTTGATGGAGTATTGTACTGCAAGCACCATTTTTCTCAGCTGTTCATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAAACGCCACACCCCCGGCCGATCGCGCCGAAGAAGATGCCGAGTCTCAGCCTCAATCCGAGGATCATGCAGTAGAGCAATCTTGA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNATPPADRAEEDAESQPQSEDHAVEQS

Homology

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.8e-81
Identity = 144/205 (70.24%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG+PYHK CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ   +EK  ELTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEK-PELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF+QLFM KGNY HVL+AA +++ A
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 T-------PPADRAEEDAESQPQSE 199
           +       P  D A E  E    SE
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENGVSE 204

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.8e-81
Identity = 142/200 (71.00%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG+PYHK CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT   +EK ++ T+ P++LSS FSGTQDKC+ C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HFSQLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADRAE-EDAESQPQSED 200
           T   D+ E ++ E+ P  E+
Sbjct: 183 TAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.2e-78
Identity = 145/214 (67.76%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEG  YHK CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSE-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ   +EK ++ LTRTPSKLSS FSGTQDKC+ C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF+QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----NATPPA-DRAEEDAESQPQS-EDHAVEQS 206
                 A+PP+ D   +D  S P++ ED A  ++
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPEA 214

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71
Identity = 129/200 (64.50%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT DKC ACDKTV+ +DLL+ +G+PYHK CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKE+G+FSK F         EL R PSK+ S FSGTQDKC+ C KTVYPLEK+TL
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDKELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVL--------- 180
           EGE YHK+CF+C+HGGC LT  SYAAL+GVLYCK HF QLFM KG+YNH+          
Sbjct: 121 EGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVL 180

Query: 181 -EAAANKKNATPPADRAEED 191
            E    ++ A PP D   ED
Sbjct: 181 PEVVPEEQPAPPPPDENRED 200

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.4e-70
Identity = 124/201 (61.69%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +GI YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT--KP--SEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  KP   +   EL RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++  +YAAL+G+LYCKHHF+QLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKNATPPADRAEEDAESQPQS 198
           K+ AT  A  A     + P+S
Sbjct: 181 KR-ATAAATAAAAAVAAVPES 200

[Close]

BLAST of Cp4.1LG03g16760 vs. NCBI nr
Match: XP_022924601.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1102), Expect = 9.84e-152
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPADRAEEDAESQPQSEDHAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. NCBI nr
Match: XP_022980415.1 (LIM domain-containing protein PLIM2b-like [Cucurbita maxima])

HSP 1 Score: 426 bits (1095), Expect = 1.15e-150
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLS+MFSGTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKN 
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPADRAEEDAESQPQSEDHAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 402 bits (1033), Expect = 3.28e-141
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPA+  EEDA+ QPQSE+HAVEQS
Sbjct: 181 TPPAEHGEEDADPQPQSEEHAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 397 bits (1021), Expect = 2.29e-139
Identity = 191/206 (92.72%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ TKPSEKQSELTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKN 180
           LEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK 
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180

Query: 181 ATPPADRAEEDAESQPQSEDHAVEQS 205
            TPPA+  EEDA+ QPQSE+HAVEQS
Sbjct: 181 TTPPAEHGEEDADPQPQSEEHAVEQS 206

[Close]

BLAST of Cp4.1LG03g16760 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 387 bits (994), Expect = 2.90e-135
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSE+Q++LTRTPSKLSSMF GTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPA+  +EDAE  P+S + AVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 4.77e-152
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPADRAEEDAESQPQSEDHAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 5.57e-151
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLS+MFSGTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKN 
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPADRAEEDAESQPQSEDHAVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 387 bits (994), Expect = 1.40e-135
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTKPSE+Q++LTRTPSKLSSMF GTQDKCSVCTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPA+  +EDAE  P+S + AVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 3.30e-134
Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADRAEEDAESQPQSEDHAVEQS 205
           TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL
Match: A0A6J1D1H7 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016415 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 5.21e-129
Identity = 178/206 (86.41%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNF  +KPSEKQ++LTR PSKLSSMFSGTQDKCSVC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFHASKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKN 180
           LEGECYHK CFRCAHGGC+LTH + AALDGVLYCKHHF+QLFMVKGNYNHVL+AAANKK 
Sbjct: 121 LEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 ATPPADRAEEDAESQPQSEDHAVEQS 205
           +TPP + A+++AE Q QSEDH VEQS
Sbjct: 181 STPPPEPADDEAEPQAQSEDHDVEQS 206

[Close]

BLAST of Cp4.1LG03g16760 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 301.6 bits (771), Expect = 4.8e-82
Identity = 144/205 (70.24%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG+PYHK CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ   +EK  ELTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEK-PELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF+QLFM KGNY HVL+AA +++ A
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 T-------PPADRAEEDAESQPQSE 199
           +       P  D A E  E    SE
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENGVSE 204

[Close]

BLAST of Cp4.1LG03g16760 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 301.6 bits (771), Expect = 4.8e-82
Identity = 142/200 (71.00%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG+PYHK CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-PSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT   +EK ++ T+ P++LSS FSGTQDKC+ C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HFSQLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADRAE-EDAESQPQSED 200
           T   D+ E ++ E+ P  E+
Sbjct: 183 TAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of Cp4.1LG03g16760 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 291.2 bits (744), Expect = 6.5e-79
Identity = 145/214 (67.76%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEG  YHK CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKPSEKQSE-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ   +EK ++ LTRTPSKLSS FSGTQDKC+ C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF+QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----NATPPA-DRAEEDAESQPQS-EDHAVEQS 206
                 A+PP+ D   +D  S P++ ED A  ++
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPEA 214

[Close]

BLAST of Cp4.1LG03g16760 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-71
Identity = 124/201 (61.69%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +GI YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT--KP--SEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  KP   +   EL RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++  +YAAL+G+LYCKHHF+QLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKNATPPADRAEEDAESQPQS 198
           K+ AT  A  A     + P+S
Sbjct: 181 KR-ATAAATAAAAAVAAVPES 200

[Close]

BLAST of Cp4.1LG03g16760 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-70
Identity = 122/200 (61.00%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G+ YHK CFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KPSEKQS-ELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+  K ++K + ELTRTPS+++  FSGTQ+KC+ C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++  +YAAL+G+LYCKHHF+QLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KNATPPADRAEEDAESQPQS 198
           ++A   A  A   A S P+S
Sbjct: 181 RSAA-AAVAAGVPAASVPES 199

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g16760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECF5	6.8e-81	70.24	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q500W4	6.8e-81	71.00	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
O80839	9.2e-78	67.76	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	1.3e-71	64.50	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
O04193	5.4e-70	61.69	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]

BLAST of Cp4.1LG03g16760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924601.1	9.84e-152	100.00	LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 L...	[more]
XP_022980415.1	1.15e-150	99.02	LIM domain-containing protein PLIM2b-like [Cucurbita maxima]	[more]
XP_038891791.1	3.28e-141	93.17	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_038891725.1	2.29e-139	92.72	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_008438068.1	2.90e-135	89.27	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]

BLAST of Cp4.1LG03g16760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9W7	4.77e-152	100.00	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IW81	5.57e-151	99.02	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3AVG8	1.40e-135	89.27	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A0A0L6A8	3.30e-134	88.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A6J1D1H7	5.21e-129	86.41	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Cp4.1LG03g16760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01780.1	4.8e-82	70.24	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	4.8e-82	71.00	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	6.5e-79	67.76	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.8e-71	61.69	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	5.5e-70	61.00	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 104..156 e-value: 3.5E-12 score: 56.5 coord: 9..61 e-value: 2.8E-11 score: 53.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 105..160 e-value: 1.9E-10 score: 40.8 coord: 10..65 e-value: 9.0E-12 score: 45.0
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 103..163 score: 12.3157
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.1572
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 6..74 e-value: 6.0E-18 score: 66.8 coord: 99..169 e-value: 8.8E-19 score: 69.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..205
None	No IPR available	PANTHER	PTHR24206:SF74	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..201
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..201
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 131..170
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 97..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g16760.1	Cp4.1LG03g16760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding