Cp4.1LG03g16050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g16050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionpentatricopeptide repeat-containing protein At5g15010, mitochondrial
LocationCp4.1LG03: 13583227 .. 13584675 (+)
RNA-Seq ExpressionCp4.1LG03g16050
SyntenyCp4.1LG03g16050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATATTTCGTGGGTTTCGGAATGTAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTCGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGACGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTGGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTTTGCAACAAAGATGTGTTCCCGTTTAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATACAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGGCGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAAGTTCGCAACCTTTATAGGGTGCTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAACGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATTGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGAAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAATATGAGAACGATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAACCCAGGGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTGGAACCCGAACTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGTTGCAAGAGATTCTGGTTTTTCATTTTGGAAGCAGTAA

mRNA sequence

ATGGATATATTTCGTGGGTTTCGGAATGTAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTCGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGACGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTGGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTTTGCAACAAAGATGTGTTCCCGTTTAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATACAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGGCGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAAGTTCGCAACCTTTATAGGGTGCTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAACGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATTGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGAAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAATATGAGAACGATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAACCCAGGGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTGGAACCCGAACTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGTTGCAAGAGATTCTGGTTTTTCATTTTGGAAGCAGTAA

Coding sequence (CDS)

ATGGATATATTTCGTGGGTTTCGGAATGTAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTCGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGACGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTGGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTTTGCAACAAAGATGTGTTCCCGTTTAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATACAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGGCGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAAGTTCGCAACCTTTATAGGGTGCTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAACGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATTGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGAAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAATATGAGAACGATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAACCCAGGGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTGGAACCCGAACTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGTTGCAAGAGATTCTGGTTTTTCATTTTGGAAGCAGTAA

Protein sequence

MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFWKQ
Homology
BLAST of Cp4.1LG03g16050 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 617.1 bits (1590), Expect = 1.7e-175
Identity = 298/473 (63.00%), Postives = 368/473 (77.80%), Query Frame = 0

Query: 11  DRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMIS 70
           DR +++NKLE C +K S ELVV +LSR+RNDWE AFTFFVWAGKQ GY  S+REYHSMIS
Sbjct: 110 DRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMIS 169

Query: 71  ILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFG 130
           ILGKMRKFDTAW LIDEMR      SLV  QTLLIMIR+YCAVHDVGKAINTFHA+KRF 
Sbjct: 170 ILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 229

Query: 131 FKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAE 190
            ++G+++FQSLLSALCRYKNV DA +L+FCNKD +PF+ KSFNIVLNGWCN IGS R+AE
Sbjct: 230 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 289

Query: 191 RIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHAL 250
           R+W EM   G+ HD VSY+S+ISCYSK  +L +VL+LFD MK+  I+PDRKVYNAV+HAL
Sbjct: 290 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 349

Query: 251 AKGGLLKEAIDLIKTM-EEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPT 310
           AK   + EA +L+KTM EEKGI PNVVTYNS+IKPLCKARK ++A+ VF+E+L++GL PT
Sbjct: 350 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPT 409

Query: 311 IQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMS 370
           I+TYHAF+R LRT EE+FE+L  MR MGC PT ETYIMLIRK CRWR  D V  +W EM 
Sbjct: 410 IRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 469

Query: 371 ENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGNPGIQ 430
           E  + PD SSYIV+IHGLFLNGK+E+AY YY EMK+K + P   +++++++W +G     
Sbjct: 470 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK---- 529

Query: 431 GYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFWKQ 483
                + +  +DS GE  N     K   ++ +F +QPE+RKV R+ G+SFW +
Sbjct: 530 ---QYAEQRITDSKGE-VNKGAIVKKSEREKNFLQQPEVRKVVREHGYSFWDE 572

BLAST of Cp4.1LG03g16050 vs. ExPASy Swiss-Prot
Match: Q9SAH2 (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-71
Identity = 144/401 (35.91%), Postives = 229/401 (57.11%), Query Frame = 0

Query: 19  LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 78
           LE     ++ +   +++  +R++W  AF  F W  K+       +    MI +LG  +KF
Sbjct: 114 LEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKF 173

Query: 79  DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 138
           + AW LI +M       S  T + + +M+ RY A +D  +AI TF    +F      E F
Sbjct: 174 NIAWCLIRDM----FNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAF 233

Query: 139 QSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQ 198
           Q LL ALCR+ +++ AE  +  +K +FP + + FN++LNGWCN    + +A+RIWREM  
Sbjct: 234 QGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGN 293

Query: 199 RGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKE 258
             I  +  SY+ +ISC+SKV NL+  LRL+D MK+  + P  +VYN++++ L +     E
Sbjct: 294 YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDE 353

Query: 259 AIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTYHAFLR 318
           A+ L+K + E+G+ P+ VTYNS+I+PLC+A K D AR V   ++   L PT+ T+HAFL 
Sbjct: 354 AMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE 413

Query: 319 FLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISPDRS 378
            +  E+ + EVL  M+     PT ET+++++ K  + +Q +   +IW EM    I  + +
Sbjct: 414 AVNFEKTL-EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPA 473

Query: 379 SYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLK 420
            Y+  I GL   G LE A + Y EMK K  +  P + ++L+
Sbjct: 474 LYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLE 507

BLAST of Cp4.1LG03g16050 vs. ExPASy Swiss-Prot
Match: Q9LIL5 (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.0e-70
Identity = 142/419 (33.89%), Postives = 235/419 (56.09%), Query Frame = 0

Query: 2   DIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHS 61
           +I +  R     ++K  L+ C I ++ ELV+ V++R R+DW+ A+       KQ  +  S
Sbjct: 83  NIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSS 142

Query: 62  IREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAIN 121
              Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ RY A H V +A+ 
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 202

Query: 122 TFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCN 181
            F   K FG    L  F  LL  LCRYK+V+ AE L    +  F  + K+ N++LNGWC 
Sbjct: 203 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWC- 262

Query: 182 TIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRK 241
            +G++ +A+R W+++       D VSY ++I+  +K   L + + L+  M   + +PD K
Sbjct: 263 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 322

Query: 242 VYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEEL 301
           + N VI AL     + EA+++ + + EKG  PNVVTYNS++K LCK R+ +    + EE+
Sbjct: 323 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 382

Query: 302 -LKRGLC-PTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLD 361
            LK G C P   T+   L++ +  +++  VLE M    C  T++ Y ++ R + +W + +
Sbjct: 383 ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 442

Query: 362 IVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVL 419
            V  IW EM  +G+ PD+ +Y + IHGL   GK+ +A  Y+ EM  K ++PEP+ + +L
Sbjct: 443 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497

BLAST of Cp4.1LG03g16050 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.4e-60
Identity = 127/382 (33.25%), Postives = 208/382 (54.45%), Query Frame = 0

Query: 30  LVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMR 89
           L+  VL+R  +     + FFVWA KQP Y HSI  Y SM+ IL KMR+F   W LI+EMR
Sbjct: 115 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 174

Query: 90  GGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYK 149
                  L+ P+  +++++R+ +   V KAI       +FGF+     F  LL ALC++ 
Sbjct: 175 --KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 234

Query: 150 NVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQRGIGHDAVSYA 209
           +VKDA  L    +  FP N + F  +L GWC  +G + +A+ +  +M + G   D V Y 
Sbjct: 235 SVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCR-VGKMMEAKYVLVQMNEAGFEPDIVDYT 294

Query: 210 SIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKEAIDLIKTMEEK 269
           +++S Y+    +     L  +M++   +P+   Y  +I AL K   ++EA+ +   ME  
Sbjct: 295 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 354

Query: 270 GIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTY-HAFLRFLRTE--EEI 329
               +VVTY +++   CK  K D   +V ++++K+GL P+  TY H  +   + E  EE 
Sbjct: 355 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 414

Query: 330 FEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISPDRSSYIVLIHG 389
            E++E MR +  +P    Y ++IR  C+  ++    R+W+EM ENG+SP   +++++I+G
Sbjct: 415 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 474

Query: 390 LFLNGKLEDAYKYYLEMKEKEL 409
           L   G L +A  ++ EM  + L
Sbjct: 475 LASQGCLLEASDHFKEMVTRGL 493

BLAST of Cp4.1LG03g16050 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-58
Identity = 122/410 (29.76%), Postives = 208/410 (50.73%), Query Frame = 0

Query: 14  QVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILG 73
           +V+  L    +K+S  L+  VL ++ N    A + F WA  Q G+ H+   Y+++I  LG
Sbjct: 80  KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLG 139

Query: 74  KMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKV 133
           K+++F   W+L+D+M+       L++ +T  ++ RRY     V +AI  FH  + FGFK+
Sbjct: 140 KIKQFKLIWSLVDDMK----AKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKM 199

Query: 134 GLEEFQSLLSALCRYKNVKDAEYLL-FCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERI 193
              +F  +L  L + +NV DA+ +     K  F  + KS+ I+L GW   +  LR  + +
Sbjct: 200 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLR-VDEV 259

Query: 194 WREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAK 253
            REM   G   D V+Y  II+ + K +     +R F+ M+Q    P   ++ ++I+ L  
Sbjct: 260 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 319

Query: 254 GGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQT 313
              L +A++  +  +  G      TYN+++   C +++ +DA    +E+  +G+ P  +T
Sbjct: 320 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNART 379

Query: 314 YHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENG 373
           Y   L  L   +   E  E  +TM C PT  TY +++R FC   +LD+  +IW EM   G
Sbjct: 380 YDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 439

Query: 374 ISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWL 423
           + P    +  LI  L    KL++A +Y+ EM +  + P   +   LK  L
Sbjct: 440 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484

BLAST of Cp4.1LG03g16050 vs. NCBI nr
Match: XP_023527399.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 995 bits (2573), Expect = 0.0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 105 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 164

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI
Sbjct: 165 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 224

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC
Sbjct: 225 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 284

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR
Sbjct: 285 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 344

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE
Sbjct: 345 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 404

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 405 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 464

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 465 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 524

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 525 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 584

Query: 481 KQ 482
           KQ
Sbjct: 585 KQ 586

BLAST of Cp4.1LG03g16050 vs. NCBI nr
Match: XP_023527396.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527397.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527398.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 995 bits (2573), Expect = 0.0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 137 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 196

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI
Sbjct: 197 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 256

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC
Sbjct: 257 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 316

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR
Sbjct: 317 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 376

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE
Sbjct: 377 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 436

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 437 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 496

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 497 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 556

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 557 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 616

Query: 481 KQ 482
           KQ
Sbjct: 617 KQ 618

BLAST of Cp4.1LG03g16050 vs. NCBI nr
Match: XP_022979235.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979236.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979237.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979238.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 467/482 (96.89%), Postives = 470/482 (97.51%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVV VLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 142 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEAAFTFFVWAGKQPGYTH 201

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTL+IMIRRYCAVHDVGKAI
Sbjct: 202 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLIIMIRRYCAVHDVGKAI 261

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKD FPFNTKSFNIVLNGWC
Sbjct: 262 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDAFPFNTKSFNIVLNGWC 321

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRVLRLFDNMKQMKIDPDR
Sbjct: 322 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDR 381

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVV EE
Sbjct: 382 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEE 441

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 442 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDI 501

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 502 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 561

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSEN SDSSGEGKN   NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 562 WLAGKPVIQGYMNGSSENTSDSSGEGKN--SNSKLFPKKIDFHRQPEIRKVARDSGFSFW 621

Query: 481 KQ 482
           KQ
Sbjct: 622 KQ 621

BLAST of Cp4.1LG03g16050 vs. NCBI nr
Match: XP_022979239.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 467/482 (96.89%), Postives = 470/482 (97.51%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVV VLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 110 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEAAFTFFVWAGKQPGYTH 169

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTL+IMIRRYCAVHDVGKAI
Sbjct: 170 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLIIMIRRYCAVHDVGKAI 229

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKD FPFNTKSFNIVLNGWC
Sbjct: 230 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDAFPFNTKSFNIVLNGWC 289

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRVLRLFDNMKQMKIDPDR
Sbjct: 290 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDR 349

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVV EE
Sbjct: 350 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEE 409

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 410 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDI 469

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 470 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 529

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSEN SDSSGEGKN   NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 530 WLAGKPVIQGYMNGSSENTSDSSGEGKN--SNSKLFPKKIDFHRQPEIRKVARDSGFSFW 589

Query: 481 KQ 482
           KQ
Sbjct: 590 KQ 589

BLAST of Cp4.1LG03g16050 vs. NCBI nr
Match: XP_022924384.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucurbita moschata])

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 465/482 (96.47%), Postives = 469/482 (97.30%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIF GFRN DRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 105 MDIFCGFRNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 164

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI
Sbjct: 165 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 224

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFP NTKSFNIVLNGWC
Sbjct: 225 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWC 284

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRV+RLFDNMKQMKIDPDR
Sbjct: 285 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVVRLFDNMKQMKIDPDR 344

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKA+KFDDARVVFEE
Sbjct: 345 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKAQKFDDARVVFEE 404

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MR MGCNP TETYIMLIRKFCRWRQLDI
Sbjct: 405 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRRMGCNPITETYIMLIRKFCRWRQLDI 464

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGI PDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 465 VSRIWHEMSENGIGPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 524

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSENPSDSSGEGKN N NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 525 WLAGKPVIQGYMNGSSENPSDSSGEGKNSNSNSKLFPKKIDFHRQPEIRKVARDSGFSFW 584

Query: 481 KQ 482
           KQ
Sbjct: 585 KQ 586

BLAST of Cp4.1LG03g16050 vs. ExPASy TrEMBL
Match: A0A6J1IVL9 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479025 PE=4 SV=1)

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 467/482 (96.89%), Postives = 470/482 (97.51%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVV VLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 142 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEAAFTFFVWAGKQPGYTH 201

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTL+IMIRRYCAVHDVGKAI
Sbjct: 202 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLIIMIRRYCAVHDVGKAI 261

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKD FPFNTKSFNIVLNGWC
Sbjct: 262 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDAFPFNTKSFNIVLNGWC 321

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRVLRLFDNMKQMKIDPDR
Sbjct: 322 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDR 381

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVV EE
Sbjct: 382 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEE 441

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 442 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDI 501

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 502 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 561

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSEN SDSSGEGKN   NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 562 WLAGKPVIQGYMNGSSENTSDSSGEGKN--SNSKLFPKKIDFHRQPEIRKVARDSGFSFW 621

Query: 481 KQ 482
           KQ
Sbjct: 622 KQ 621

BLAST of Cp4.1LG03g16050 vs. ExPASy TrEMBL
Match: A0A6J1IW50 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479025 PE=4 SV=1)

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 467/482 (96.89%), Postives = 470/482 (97.51%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVV VLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 110 MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEAAFTFFVWAGKQPGYTH 169

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTL+IMIRRYCAVHDVGKAI
Sbjct: 170 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLIIMIRRYCAVHDVGKAI 229

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKD FPFNTKSFNIVLNGWC
Sbjct: 230 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDAFPFNTKSFNIVLNGWC 289

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRVLRLFDNMKQMKIDPDR
Sbjct: 290 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVLRLFDNMKQMKIDPDR 349

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVV EE
Sbjct: 350 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVLEE 409

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MRTMGCNPTTETYIMLIRKFCRWRQLDI
Sbjct: 410 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRTMGCNPTTETYIMLIRKFCRWRQLDI 469

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 470 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 529

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSEN SDSSGEGKN   NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 530 WLAGKPVIQGYMNGSSENTSDSSGEGKN--SNSKLFPKKIDFHRQPEIRKVARDSGFSFW 589

Query: 481 KQ 482
           KQ
Sbjct: 590 KQ 589

BLAST of Cp4.1LG03g16050 vs. ExPASy TrEMBL
Match: A0A6J1E902 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431896 PE=4 SV=1)

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 465/482 (96.47%), Postives = 469/482 (97.30%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIF GFRN DRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH
Sbjct: 105 MDIFCGFRNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 164

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI
Sbjct: 165 SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 224

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFP NTKSFNIVLNGWC
Sbjct: 225 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWC 284

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLYRV+RLFDNMKQMKIDPDR
Sbjct: 285 NIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVVRLFDNMKQMKIDPDR 344

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKA+KFDDARVVFEE
Sbjct: 345 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKAQKFDDARVVFEE 404

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGLCPTIQTYHAFLRFLRTEEEIFEVLE MR MGCNP TETYIMLIRKFCRWRQLDI
Sbjct: 405 LLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRRMGCNPITETYIMLIRKFCRWRQLDI 464

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGI PDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA
Sbjct: 465 VSRIWHEMSENGIGPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 524

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGYMNGSSENPSDSSGEGKN N NSKLFPKKIDFHRQPEIRKVARDSGFSFW
Sbjct: 525 WLAGKPVIQGYMNGSSENPSDSSGEGKNSNSNSKLFPKKIDFHRQPEIRKVARDSGFSFW 584

Query: 481 KQ 482
           KQ
Sbjct: 585 KQ 586

BLAST of Cp4.1LG03g16050 vs. ExPASy TrEMBL
Match: A0A6J1CVY6 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111014876 PE=4 SV=1)

HSP 1 Score: 863 bits (2229), Expect = 3.18e-312
Identity = 419/482 (86.93%), Postives = 444/482 (92.12%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           +DI RGF +V+RIQVKNKLEHC IKVS ELVVAVLSR+RNDWEAAFTFFVWA KQPGY H
Sbjct: 141 VDILRGFGDVNRIQVKNKLEHCRIKVSEELVVAVLSRVRNDWEAAFTFFVWASKQPGYAH 200

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           S+REYHSMISILGKMRKFDTAWALIDEMRGG TGSSLVTPQTLLIMIR+YCAVHDVGKAI
Sbjct: 201 SVREYHSMISILGKMRKFDTAWALIDEMRGGATGSSLVTPQTLLIMIRKYCAVHDVGKAI 260

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHK+FGF VGLEEFQ+LLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNI+LNGWC
Sbjct: 261 NTFHAHKKFGFNVGLEEFQNLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC 320

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
           N IGSLRDAERIW+EM QRGI HDAVSYASIISCYSK R+LY+VLRLFDNMKQMKI+PDR
Sbjct: 321 NIIGSLRDAERIWKEMTQRGISHDAVSYASIISCYSKARHLYKVLRLFDNMKQMKIEPDR 380

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIHALAKGGLLKEA  LIK MEEKGII +VVTYNSVIKPLCKARKFD+AR VFEE
Sbjct: 381 KVYNAVIHALAKGGLLKEASHLIKCMEEKGIIADVVTYNSVIKPLCKARKFDEARAVFEE 440

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           LL+RGL PTIQTYHAFLRFLRTEEEIFE+LE MR MGCNPTT+TYIMLIRKFCRWRQLD 
Sbjct: 441 LLQRGLFPTIQTYHAFLRFLRTEEEIFELLERMRRMGCNPTTDTYIMLIRKFCRWRQLDN 500

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VS+IW EMSE+GISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVL+A
Sbjct: 501 VSKIWREMSESGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLQA 560

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG P IQGY NG SEN SD SGEGKN     K   +KIDF RQPE+R+V+R SGFSFW
Sbjct: 561 WLAGKPMIQGYTNGLSENQSDCSGEGKNSRSLPKKIDQKIDFRRQPEVRRVSRASGFSFW 620

Query: 481 KQ 482
           KQ
Sbjct: 621 KQ 622

BLAST of Cp4.1LG03g16050 vs. ExPASy TrEMBL
Match: A0A1S3AUX2 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483141 PE=3 SV=1)

HSP 1 Score: 851 bits (2198), Expect = 7.39e-308
Identity = 415/482 (86.10%), Postives = 444/482 (92.12%), Query Frame = 0

Query: 1   MDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTH 60
           MDIFRGFRNV+RI+VKNKLEHC IKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGY H
Sbjct: 132 MDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAH 191

Query: 61  SIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAI 120
           S+REYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLLIMIRRYCAVHDV KAI
Sbjct: 192 SVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAI 251

Query: 121 NTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWC 180
           NTFHAHKRFGF +GLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNI+LNGWC
Sbjct: 252 NTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC 311

Query: 181 NTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDR 240
             IGSLRD ER+W+EM +RGI HDA+SYAS ISCYSKVRNL++VL+LF++MK+MKIDPDR
Sbjct: 312 -IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKVLKLFEDMKRMKIDPDR 371

Query: 241 KVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEE 300
           KVYNAVIH+LAKG  LKEA DLIKTMEEKGIIPNVVTYNSVIKPLCKAR+FD+AR VFEE
Sbjct: 372 KVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIPNVVTYNSVIKPLCKARRFDEARAVFEE 431

Query: 301 LLKRGLCPTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDI 360
           +L+RGLCPTIQTYHAFLRFLRTEEEIFE+L+ MRTMGCNPT +TYIMLIRKFCRWRQLD 
Sbjct: 432 ILQRGLCPTIQTYHAFLRFLRTEEEIFELLKKMRTMGCNPTADTYIMLIRKFCRWRQLDN 491

Query: 361 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKA 420
           VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDA+KYYLEMKEKELLPEPKIDEVL+A
Sbjct: 492 VSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKELLPEPKIDEVLQA 551

Query: 421 WLAGNPGIQGYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFW 480
           WLAG    Q       ENPSD SGEGKN    S+LFP+K DFHRQPEI K +RD GFSFW
Sbjct: 552 WLAGRSMFQ-------ENPSDCSGEGKN----SRLFPEK-DFHRQPEIIKGSRDRGFSFW 600

Query: 481 KQ 482
           +Q
Sbjct: 612 RQ 600

BLAST of Cp4.1LG03g16050 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 617.1 bits (1590), Expect = 1.2e-176
Identity = 298/473 (63.00%), Postives = 368/473 (77.80%), Query Frame = 0

Query: 11  DRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMIS 70
           DR +++NKLE C +K S ELVV +LSR+RNDWE AFTFFVWAGKQ GY  S+REYHSMIS
Sbjct: 110 DRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMIS 169

Query: 71  ILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFG 130
           ILGKMRKFDTAW LIDEMR      SLV  QTLLIMIR+YCAVHDVGKAINTFHA+KRF 
Sbjct: 170 ILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 229

Query: 131 FKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAE 190
            ++G+++FQSLLSALCRYKNV DA +L+FCNKD +PF+ KSFNIVLNGWCN IGS R+AE
Sbjct: 230 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 289

Query: 191 RIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHAL 250
           R+W EM   G+ HD VSY+S+ISCYSK  +L +VL+LFD MK+  I+PDRKVYNAV+HAL
Sbjct: 290 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 349

Query: 251 AKGGLLKEAIDLIKTM-EEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPT 310
           AK   + EA +L+KTM EEKGI PNVVTYNS+IKPLCKARK ++A+ VF+E+L++GL PT
Sbjct: 350 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPT 409

Query: 311 IQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMS 370
           I+TYHAF+R LRT EE+FE+L  MR MGC PT ETYIMLIRK CRWR  D V  +W EM 
Sbjct: 410 IRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 469

Query: 371 ENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGNPGIQ 430
           E  + PD SSYIV+IHGLFLNGK+E+AY YY EMK+K + P   +++++++W +G     
Sbjct: 470 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK---- 529

Query: 431 GYMNGSSENPSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRKVARDSGFSFWKQ 483
                + +  +DS GE  N     K   ++ +F +QPE+RKV R+ G+SFW +
Sbjct: 530 ---QYAEQRITDSKGE-VNKGAIVKKSEREKNFLQQPEVRKVVREHGYSFWDE 572

BLAST of Cp4.1LG03g16050 vs. TAIR 10
Match: AT1G80880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-72
Identity = 144/401 (35.91%), Postives = 229/401 (57.11%), Query Frame = 0

Query: 19  LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 78
           LE     ++ +   +++  +R++W  AF  F W  K+       +    MI +LG  +KF
Sbjct: 114 LEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKF 173

Query: 79  DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 138
           + AW LI +M       S  T + + +M+ RY A +D  +AI TF    +F      E F
Sbjct: 174 NIAWCLIRDM----FNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAF 233

Query: 139 QSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQ 198
           Q LL ALCR+ +++ AE  +  +K +FP + + FN++LNGWCN    + +A+RIWREM  
Sbjct: 234 QGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGN 293

Query: 199 RGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKE 258
             I  +  SY+ +ISC+SKV NL+  LRL+D MK+  + P  +VYN++++ L +     E
Sbjct: 294 YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDE 353

Query: 259 AIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTYHAFLR 318
           A+ L+K + E+G+ P+ VTYNS+I+PLC+A K D AR V   ++   L PT+ T+HAFL 
Sbjct: 354 AMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE 413

Query: 319 FLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISPDRS 378
            +  E+ + EVL  M+     PT ET+++++ K  + +Q +   +IW EM    I  + +
Sbjct: 414 AVNFEKTL-EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPA 473

Query: 379 SYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLK 420
            Y+  I GL   G LE A + Y EMK K  +  P + ++L+
Sbjct: 474 LYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLE 507

BLAST of Cp4.1LG03g16050 vs. TAIR 10
Match: AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-71
Identity = 142/419 (33.89%), Postives = 235/419 (56.09%), Query Frame = 0

Query: 2   DIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHS 61
           +I +  R     ++K  L+ C I ++ ELV+ V++R R+DW+ A+       KQ  +  S
Sbjct: 83  NIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSS 142

Query: 62  IREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAIN 121
              Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ RY A H V +A+ 
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 202

Query: 122 TFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCN 181
            F   K FG    L  F  LL  LCRYK+V+ AE L    +  F  + K+ N++LNGWC 
Sbjct: 203 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWC- 262

Query: 182 TIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRK 241
            +G++ +A+R W+++       D VSY ++I+  +K   L + + L+  M   + +PD K
Sbjct: 263 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 322

Query: 242 VYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEEL 301
           + N VI AL     + EA+++ + + EKG  PNVVTYNS++K LCK R+ +    + EE+
Sbjct: 323 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 382

Query: 302 -LKRGLC-PTIQTYHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLD 361
            LK G C P   T+   L++ +  +++  VLE M    C  T++ Y ++ R + +W + +
Sbjct: 383 ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 442

Query: 362 IVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVL 419
            V  IW EM  +G+ PD+ +Y + IHGL   GK+ +A  Y+ EM  K ++PEP+ + +L
Sbjct: 443 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497

BLAST of Cp4.1LG03g16050 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.7e-61
Identity = 127/382 (33.25%), Postives = 208/382 (54.45%), Query Frame = 0

Query: 30  LVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMR 89
           L+  VL+R  +     + FFVWA KQP Y HSI  Y SM+ IL KMR+F   W LI+EMR
Sbjct: 115 LIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR 174

Query: 90  GGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYK 149
                  L+ P+  +++++R+ +   V KAI       +FGF+     F  LL ALC++ 
Sbjct: 175 --KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 234

Query: 150 NVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQRGIGHDAVSYA 209
           +VKDA  L    +  FP N + F  +L GWC  +G + +A+ +  +M + G   D V Y 
Sbjct: 235 SVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCR-VGKMMEAKYVLVQMNEAGFEPDIVDYT 294

Query: 210 SIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKEAIDLIKTMEEK 269
           +++S Y+    +     L  +M++   +P+   Y  +I AL K   ++EA+ +   ME  
Sbjct: 295 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 354

Query: 270 GIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQTY-HAFLRFLRTE--EEI 329
               +VVTY +++   CK  K D   +V ++++K+GL P+  TY H  +   + E  EE 
Sbjct: 355 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 414

Query: 330 FEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGISPDRSSYIVLIHG 389
            E++E MR +  +P    Y ++IR  C+  ++    R+W+EM ENG+SP   +++++I+G
Sbjct: 415 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 474

Query: 390 LFLNGKLEDAYKYYLEMKEKEL 409
           L   G L +A  ++ EM  + L
Sbjct: 475 LASQGCLLEASDHFKEMVTRGL 493

BLAST of Cp4.1LG03g16050 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 2.1e-59
Identity = 122/410 (29.76%), Postives = 208/410 (50.73%), Query Frame = 0

Query: 14  QVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILG 73
           +V+  L    +K+S  L+  VL ++ N    A + F WA  Q G+ H+   Y+++I  LG
Sbjct: 80  KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLG 139

Query: 74  KMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKV 133
           K+++F   W+L+D+M+       L++ +T  ++ RRY     V +AI  FH  + FGFK+
Sbjct: 140 KIKQFKLIWSLVDDMK----AKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKM 199

Query: 134 GLEEFQSLLSALCRYKNVKDAEYLL-FCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERI 193
              +F  +L  L + +NV DA+ +     K  F  + KS+ I+L GW   +  LR  + +
Sbjct: 200 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLR-VDEV 259

Query: 194 WREMAQRGIGHDAVSYASIISCYSKVRNLYRVLRLFDNMKQMKIDPDRKVYNAVIHALAK 253
            REM   G   D V+Y  II+ + K +     +R F+ M+Q    P   ++ ++I+ L  
Sbjct: 260 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 319

Query: 254 GGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLKRGLCPTIQT 313
              L +A++  +  +  G      TYN+++   C +++ +DA    +E+  +G+ P  +T
Sbjct: 320 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNART 379

Query: 314 YHAFLRFLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENG 373
           Y   L  L   +   E  E  +TM C PT  TY +++R FC   +LD+  +IW EM   G
Sbjct: 380 YDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 439

Query: 374 ISPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWL 423
           + P    +  LI  L    KL++A +Y+ EM +  + P   +   LK  L
Sbjct: 440 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LFQ41.7e-17563.00Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
Q9SAH21.8e-7135.91Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidop... [more]
Q9LIL52.0e-7033.89Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... [more]
Q9FH872.4e-6033.25Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
Q9C9A22.9e-5829.76Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023527399.10.0100.00pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ... [more]
XP_023527396.10.0100.00pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ... [more]
XP_022979235.10.096.89pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ... [more]
XP_022979239.10.096.89pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ... [more]
XP_022924384.10.096.47pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
A0A6J1IVL90.096.89pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ... [more]
A0A6J1IW500.096.89pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ... [more]
A0A6J1E9020.096.47pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucurbit... [more]
A0A6J1CVY63.18e-31286.93pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like OS=Mom... [more]
A0A1S3AUX27.39e-30886.10pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT5G15010.11.2e-17663.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G80880.11.3e-7235.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G15200.11.4e-7133.89Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G65820.11.7e-6133.25Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G71060.12.1e-5929.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 206..235
e-value: 0.0019
score: 18.4
coord: 65..89
e-value: 0.0098
score: 16.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 363..410
e-value: 9.7E-6
score: 25.6
coord: 297..350
e-value: 4.8E-5
score: 23.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 242..275
e-value: 6.1E-8
score: 30.4
coord: 276..309
e-value: 5.6E-8
score: 30.5
coord: 206..239
e-value: 1.1E-5
score: 23.3
coord: 65..89
e-value: 7.0E-4
score: 17.6
coord: 379..410
e-value: 3.4E-5
score: 21.8
coord: 344..376
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 238..287
e-value: 3.9E-13
score: 49.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 10.709248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..203
score: 10.270796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 10.500983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 376..410
score: 10.599635
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..308
score: 13.033043
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 162..227
e-value: 7.5E-11
score: 44.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 325..437
e-value: 6.9E-19
score: 70.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 13..161
e-value: 3.7E-15
score: 57.7
coord: 228..324
e-value: 4.1E-28
score: 99.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..461
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 9..472
NoneNo IPR availablePANTHERPTHR45613:SF57OS01G0816000 PROTEINcoord: 9..472

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16050.1Cp4.1LG03g16050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding