Cp4.1LG03g14870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACTGAAACCAGCTTATAGAGATATCGCAGACTGGAATAGCTGCGTTTATCCGAACTAATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACGAGGAAACTCCATTTCTCCGGTAAGTATTACGGTGTTTATATAATCATTTCTTTGTTTTTCGTCTACTCTCATTCCTTTTTAAGTTGATTTCTACTGGATGATGCTCCGAAGCTTTTAGCTCCAGGTTTTGATGCTTTGAGTTGCGGAACATGTTCTATTATGGGGGAAATGGGATTCAACGCAATTTTACGTTACATTTTAGCTTTAAGAGTTGTATGTCTTCATTTATGGCAGGGAAAATGCCTCATGGTTCAGTTAATGTGAGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACGCCATCTGGGATACAGAATTCGTCGCCGGTTCTAAAATGTCAGGTATGATGGTGAGTTTCCTGCTCATCGGTTATGAGTATGGTACACTTATATTGTGATAACTCTCGCTGTTTCGTTTTATACTATAATTTTTAGATAAAACATGATATGAACATTGCTACTGCACTTATTTAACTATAATCTGGGACTTTTCTGAGTGGAAATTACAAGTGTTAGAAGTACTGGAAACAAGTTGGGGGAATTTCATTAGGGTTTGATTTCATTCCACTATTTGTTATGTTTATTGAAAAGAAATTTGATCAATGGAATATGATGGTGTTTTCTGCTGATAAATTTATTCTTGGCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATATACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGTAAGACTCCTTGATCTGATGCTATGTAGGGCAGTAATCACTTTTTCATTTATATAGGTATTTATCTCTCAGTAATCTAGAAGAGAAACTTTATAAAGACAGAGCTTTTGATCTTTGTGCGTGTTAAGGATATTTAGTAATTTCTACTATGGCTACCCATAGTAATTATCCTAGTAATATCTTGCGAAAATTTTACATTTCTAGTTTGATTTGGGAATATAAAGCTTGTCTAGTTTACAATACTTTTAACAGGATTGCTTGCTCGGCAAAGAAAGGGAGAACTGAAGCGGTTAAATGAACAACTTCGTCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATTCGAGAGTGATGTTATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTCTGGATTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATTAAGGAGAAGAAGGCTGCAAGGGGCTTAGGTTTGTTTTCTATCACCTATTTAACCTCTTGCTTTTTATATTGCTTTAAAGACAAAACACCTTCAAGTTGTTTGGAGCTGTTTGTCAGAATTATCCAGATGCGTTTTGAATTTAAAGCTAGTAACCTGCTGCCTGCTCTTGTTCTTTTTACTAAAACACACAATATTTGTCATTCCATGTTGGTAGTTCCAAAAGATCTTGAACAATGCTATCTTCATTGAATTCAAGGCCTTAAAGCCACCATGTGGAACCCTTAATTCTCTGCGTTCATCTTTCTCCTTGTACACAATGCTGCATTCTGGCTCTTCACCAATCAATAACTCTATAGGAGGTGTGAGTCTTCTCCTATAGGATGCATGAGCCAATTCACGTATCGATATAAGCATCGACCTCGAGATTTAAACTTCGGAGTCCCGCCTGGCCTTGGAGATGTCTCGAAAGCCTTCTAAAACTATATATTTTCTGTTAATTTCAGCAATGCAAATTGCTAAGGTTATGCACCTAGAAATGGCTCGCATTGGAAATGTTGCCTTTAATGATCCATGCATATTTTTTGCCATAGCTTTGTTTCTCTGTCAACTGTAATATAAAATGCCATTATTTATGGAGCAATTTTGTTGGAATCGCTTTGACAAGAACTGGGATATGGATCTTTCAGGGGCATCACTGCAGAGGCAGGGGAAGTACAAAGAAGCAATCAAATACCATTTAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAAAAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTAGGCGATCTTGAGAAAGCTGCCTTCTTTTATGATAGGTACATAGCGAGGCTGGAAACAGACTGATCTATTTGCAATCACCACTTGTATTTTAAAACTTCAAAATGTAGCCAAGTACTCTGTGTTTATCAATGGTAGGTAGCTCCTCTGCGGAAGAATTAGCGTTCTTATGTAGATGTTGAGTTGAGAATAACTGCAGAATCGTATCATTCTCTAGTTTGTTCCATCTGAATGAAATGATTTTTCCAAGCATTAATTCCCTGACTGGCATTTGCCTTTGATTGAATACCTCTAATGTACAACACGTTTAAGGCCACTGTTAGCAGATATTGTCTATATTGTC TCCACTGAAACCAGCTTATAGAGATATCGCAGACTGGAATAGCTGCGTTTATCCGAACTAATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACGAGGAAACTCCATTTCTCCGGGAAAATGCCTCATGGTTCAGTTAATGTGAGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACGCCATCTGGGATACAGAATTCGTCGCCGGTTCTAAAATGTCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATATACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGATTGCTTGCTCGGCAAAGAAAGGGAGAACTGAAGCGGTTAAATGAACAACTTCGTCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATTCGAGAGTGATGTTATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTCTGGATTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATTAAGGAGAAGAAGGCTGCAAGGGGCTTAGGGGCATCACTGCAGAGGCAGGGGAAGTACAAAGAAGCAATCAAATACCATTTAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAAAAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTAGGCGATCTTGAGAAAGCTGCCTTCTTTTATGATAGGTACATAGCGAGGCTGGAAACAGACTGATCTATTTGCAATCACCACTTGTATTTTAAAACTTCAAAATGTAGCCAAGTACTCTGTGTTTATCAATGGTAGGTAGCTCCTCTGCGGAAGAATTAGCGTTCTTATGTAGATGTTGAGTTGAGAATAACTGCAGAATCGTATCATTCTCTAGTTTGTTCCATCTGAATGAAATGATTTTTCCAAGCATTAATTCCCTGACTGGCATTTGCCTTTGATTGAATACCTCTAATGTACAACACGTTTAAGGCCACTGTTAGCAGATATTGTCTATATTGTC ATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACGAGGAAACTCCATTTCTCCGGGAAAATGCCTCATGGTTCAGTTAATGTGAGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACGCCATCTGGGATACAGAATTCGTCGCCGGTTCTAAAATGTCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATATACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGATTGCTTGCTCGGCAAAGAAAGGGAGAACTGAAGCGGTTAAATGAACAACTTCGTCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATTCGAGAGTGATGTTATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTCTGGATTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATTAAGGAGAAGAAGGCTGCAAGGGGCTTAGGGGCATCACTGCAGAGGCAGGGGAAGTACAAAGAAGCAATCAAATACCATTTAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAAAAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTAGGCGATCTTGAGAAAGCTGCCTTCTTTTATGATAGGTACATAGCGAGGCTGGAAACAGACTGA MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVSNFVTFCGDSIVTPSGIQNSSPVLKCQGNNETKFPVMAFLLANVYTFSVPLKVLAETCEAENSAFNMPILLSVSLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDVIVDPRKEELISRLKSGKNFLRNQDPEKAFLDFKTALELAQGLQDPIKEKKAARGLGASLQRQGKYKEAIKYHLMVLAISEREGEKSGNTEAFGAIADCYTELGDLEKAAFFYDRYIARLETD Homology
BLAST of Cp4.1LG03g14870 vs. ExPASy Swiss-Prot
Match: Q940U6 (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FLU PE=1 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 3.4e-89 Identity = 172/230 (74.78%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. NCBI nr
Match: XP_023527015.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 593 bits (1528), Expect = 1.99e-213 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. NCBI nr
Match: XP_022955373.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita moschata] >KAG6581775.1 Protein FLUORESCENT IN BLUE LIGHT, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 583 bits (1504), Expect = 9.08e-210 Identity = 297/302 (98.34%), Postives = 299/302 (99.01%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. NCBI nr
Match: KAG7018230.1 (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 580 bits (1496), Expect = 1.40e-208 Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. NCBI nr
Match: XP_022980676.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 565 bits (1455), Expect = 2.67e-202 Identity = 289/302 (95.70%), Postives = 291/302 (96.36%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. NCBI nr
Match: XP_038878260.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic [Benincasa hispida]) HSP 1 Score: 505 bits (1301), Expect = 6.50e-179 Identity = 255/297 (85.86%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. ExPASy TrEMBL
Match: A0A6J1GTS1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457422 PE=4 SV=1) HSP 1 Score: 583 bits (1504), Expect = 4.40e-210 Identity = 297/302 (98.34%), Postives = 299/302 (99.01%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. ExPASy TrEMBL
Match: A0A6J1IU87 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479975 PE=4 SV=1) HSP 1 Score: 565 bits (1455), Expect = 1.29e-202 Identity = 289/302 (95.70%), Postives = 291/302 (96.36%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. ExPASy TrEMBL
Match: A0A6J1GBY8 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452770 PE=4 SV=1) HSP 1 Score: 499 bits (1285), Expect = 8.61e-177 Identity = 252/297 (84.85%), Postives = 277/297 (93.27%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. ExPASy TrEMBL
Match: A0A0A0L9E8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G645960 PE=4 SV=1) HSP 1 Score: 496 bits (1278), Expect = 1.00e-175 Identity = 250/297 (84.18%), Postives = 276/297 (92.93%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. ExPASy TrEMBL
Match: A0A6J1D4T4 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016954 PE=4 SV=1) HSP 1 Score: 490 bits (1261), Expect = 4.19e-173 Identity = 246/300 (82.00%), Postives = 273/300 (91.00%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. TAIR 10
Match: AT3G14110.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 330.9 bits (847), Expect = 1.1e-90 Identity = 173/230 (75.22%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. TAIR 10
Match: AT3G14110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 329.7 bits (844), Expect = 2.4e-90 Identity = 172/230 (74.78%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. TAIR 10
Match: AT3G14110.3 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 328.6 bits (841), Expect = 5.4e-90 Identity = 172/229 (75.11%), Postives = 196/229 (85.59%), Query Frame = 0
BLAST of Cp4.1LG03g14870 vs. TAIR 10
Match: AT3G16760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05 Identity = 21/58 (36.21%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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