Cp4.1LG03g12880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g12880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal
Location	Cp4.1LG03: 9911818 .. 9913225 (-)
RNA-Seq Expression	Cp4.1LG03g12880
Synteny	Cp4.1LG03g12880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTAATAAATGAAGAAATTTGAGGTGAAAATTAGAAAATACTTCTGAATCCAAAGTGGACCGGAGCAATGGAAGATTACAAATCCATAAAAATCGAGCGTCAAAATCCAAGCTCCGGCGTCTTCCATCTCCGCCTCCACCGTCCATCGCACTACAACGCCCTCACAACCGAACTCTTCGCGGAACTCCGGCGAGCGCTTTCATCTCTCGATCAAAACCCCGATGTCCGCGTCATCATCCTCTCCGGATCTGGCAAGCACTTCTGCGCCGGTATCGACCTCAAATCGACGGCCTCCAACTTCGAGAATCTTCTCTCAAGCGAGCGAGGTCGAGCAGGCGAGAGGCTCCGACGGGAGGTCAAGGCGATGCAAGACTCGATAACTGCGATTGAGGAGTGCCGTAAACCGGTGATTGCGTGCATCCATGGCGGATGCATCGGCGGAGGAGTTGATATAGCGACGGCGTGTGATTTGAGGTATTGCACGGCGGAGGCGGTGTTTTCGGTGAAAGAGGTTAATTTAGCGATTACGGCGGATCTCGGGACTCTGCAGAGGCTGCCAGGAATCGTAGGGTTTGGGAAGGCGGTTGAGTTAGCGTTGACGGGCCGGGAGTTTTCGGGCTTGGAGGCTAAGGAATTGGGCCTGGTTTCTACAACTTTTGCTTCCAAGATGGAGCTCGACAATGGCGTCATCAAAATCGCTGAAGGTATTTCAAAATTTAAATTCGATTTGAAGTATTTGTCCATATCCAATTAATTGAAGCTTTTGAGTATGAACTGTGTAAATTGTTTGGTGAATGCAGAAATAGCATCAAAATCACCATTGGCAGTGGTGGGAACAAAGGCAGTGCTACTCAAAAGCAGAGACCTAACTGTTGAACAGGGCTTGGATTATGTTGCAACTTGGAACTCAGGAACTCTACTCTCAGCTGATCTCAAAGAAGCCATCTCGGCTCGAGCCCATAAACGTAACCCTACATTTTCTAAGCTGTGAGACTGAGGACTCGAAGGTATACGTCTTAATCAGTTGAATTATGCTTAACGTTATATACTTATAGTGATAGCATATGAATTGAAACTTGTTGAGGATTTCTATGATATCATTTGTTTCATTGGAAAGCAATGAAAGAAATAATGTTAGGACATGATGCATCGTGCCACTCAAAAAGAGTTATGGTATTGATTCTGTATTTTAATCGAATAAATTCTTTATAGTCTTTCTCGTGGGTTTGGAGCCGGGAATCGGGAGCCGAAGTCTACCGAAGTTGTCTATTATTGTCCTCTTTGGACTTTCCCTTTCGGGTTTCTCCTCAAGATTTTTAAAATGCTAGGGAGAGGTTTCCACACTCTTATAAAGTAAGGGTGTTTCGTTCTCCTCTTCAATGTGGGACCTCACAATCCACCCTGGTT

mRNA sequence

AAGTAATAAATGAAGAAATTTGAGGTGAAAATTAGAAAATACTTCTGAATCCAAAGTGGACCGGAGCAATGGAAGATTACAAATCCATAAAAATCGAGCGTCAAAATCCAAGCTCCGGCGTCTTCCATCTCCGCCTCCACCGTCCATCGCACTACAACGCCCTCACAACCGAACTCTTCGCGGAACTCCGGCGAGCGCTTTCATCTCTCGATCAAAACCCCGATGTCCGCGTCATCATCCTCTCCGGATCTGGCAAGCACTTCTGCGCCGGTATCGACCTCAAATCGACGGCCTCCAACTTCGAGAATCTTCTCTCAAGCGAGCGAGGTCGAGCAGGCGAGAGGCTCCGACGGGAGGTCAAGGCGATGCAAGACTCGATAACTGCGATTGAGGAGTGCCGTAAACCGGTGATTGCGTGCATCCATGGCGGATGCATCGGCGGAGGAGTTGATATAGCGACGGCGTGTGATTTGAGGTATTGCACGGCGGAGGCGGTGTTTTCGGTGAAAGAGGTTAATTTAGCGATTACGGCGGATCTCGGGACTCTGCAGAGGCTGCCAGGAATCGTAGGGTTTGGGAAGGCGGTTGAGTTAGCGTTGACGGGCCGGGAGTTTTCGGGCTTGGAGGCTAAGGAATTGGGCCTGGTTTCTACAACTTTTGCTTCCAAGATGGAGCTCGACAATGGCGTCATCAAAATCGCTGAAGAAATAGCATCAAAATCACCATTGGCAGTGGTGGGAACAAAGGCAGTGCTACTCAAAAGCAGAGACCTAACTGTTGAACAGGGCTTGGATTATGTTGCAACTTGGAACTCAGGAACTCTACTCTCAGCTGATCTCAAAGAAGCCATCTCGGCTCGAGCCCATAAACGTAACCCTACATTTTCTAAGCTGTGAGACTGAGGACTCGAAGTCTTTCTCGTGGGTTTGGAGCCGGGAATCGGGAGCCGAAGTCTACCGAAGTTGTCTATTATTGTCCTCTTTGGACTTTCCCTTTCGGGTTTCTCCTCAAGATTTTTAAAATGCTAGGGAGAGGTTTCCACACTCTTATAAAGTAAGGGTGTTTCGTTCTCCTCTTCAATGTGGGACCTCACAATCCACCCTGGTT

Coding sequence (CDS)

ATGGAAGATTACAAATCCATAAAAATCGAGCGTCAAAATCCAAGCTCCGGCGTCTTCCATCTCCGCCTCCACCGTCCATCGCACTACAACGCCCTCACAACCGAACTCTTCGCGGAACTCCGGCGAGCGCTTTCATCTCTCGATCAAAACCCCGATGTCCGCGTCATCATCCTCTCCGGATCTGGCAAGCACTTCTGCGCCGGTATCGACCTCAAATCGACGGCCTCCAACTTCGAGAATCTTCTCTCAAGCGAGCGAGGTCGAGCAGGCGAGAGGCTCCGACGGGAGGTCAAGGCGATGCAAGACTCGATAACTGCGATTGAGGAGTGCCGTAAACCGGTGATTGCGTGCATCCATGGCGGATGCATCGGCGGAGGAGTTGATATAGCGACGGCGTGTGATTTGAGGTATTGCACGGCGGAGGCGGTGTTTTCGGTGAAAGAGGTTAATTTAGCGATTACGGCGGATCTCGGGACTCTGCAGAGGCTGCCAGGAATCGTAGGGTTTGGGAAGGCGGTTGAGTTAGCGTTGACGGGCCGGGAGTTTTCGGGCTTGGAGGCTAAGGAATTGGGCCTGGTTTCTACAACTTTTGCTTCCAAGATGGAGCTCGACAATGGCGTCATCAAAATCGCTGAAGAAATAGCATCAAAATCACCATTGGCAGTGGTGGGAACAAAGGCAGTGCTACTCAAAAGCAGAGACCTAACTGTTGAACAGGGCTTGGATTATGTTGCAACTTGGAACTCAGGAACTCTACTCTCAGCTGATCTCAAAGAAGCCATCTCGGCTCGAGCCCATAAACGTAACCCTACATTTTCTAAGCTGTGA

Protein sequence

MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGREFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGLDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL

Homology

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot
Match: Q9FHR8 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=DCI1 PE=1 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-99
Identity = 183/276 (66.30%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME YK+++I R+N  S VFHL ++RPSH NAL+ + F E  +ALSSLDQNPDV VIILSG
Sbjct: 3   MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62

Query: 61  SGKHFCAGIDLKSTAS-NFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIH 120
           +GKHFC+GIDL S +S + ++   ++RGR+ E+LRR++K+MQ +ITAIE+CRKPVIA IH
Sbjct: 63  AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIH 122

Query: 121 GGCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTG 180
           G CIGGGVD+ TACD+RYC+ +A FS+KEV+LAI ADLGTLQRLP IVG+  A+ELALT 
Sbjct: 123 GACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTA 182

Query: 181 REFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQ 240
           R FSG EAK+LGLVS  F SK ELDNGV  IAE I  KSPLAV GTKAVLL+SR+++VEQ
Sbjct: 183 RRFSGSEAKDLGLVSKVFGSKSELDNGVTTIAEGIGGKSPLAVTGTKAVLLRSREVSVEQ 242

Query: 241 GLDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 276
           GLDYVATWNS  L+S DL EA+SA+  KR P F+KL
Sbjct: 243 GLDYVATWNSAMLISDDLNEAVSAQMMKRKPRFAKL 278

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot
Match: O35459 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.6e-55
Identity = 116/277 (41.88%), Postives = 169/277 (61.01%), Query Frame = 0


Query: 3   DYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSG 62
           +Y+SI++   +    V H++L+RP   NA+    + EL      + ++ D R +++SG+G
Sbjct: 53  NYESIQV--TSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG 112

Query: 63  KHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGC 122
           K F +GIDL   AS        +  R    LR  +   Q + T IE+C KPVIA IHGGC
Sbjct: 113 KMFTSGIDLMDMASELMQPSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHGGC 172

Query: 123 IGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAV-ELALTGRE 182
           IGGGVD+ +ACD+RYCT +A F +KEV++ + AD+GTLQRLP ++G    V EL  + R+
Sbjct: 173 IGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAADVGTLQRLPKVIGNQSLVNELTFSARK 232

Query: 183 FSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGL 242
               EA + GLVS  F  K  + N    +A +I+SKSP+AV G+K  L+ SRD +V++ L
Sbjct: 233 MMADEALDSGLVSRVFQDKDAMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESL 292

Query: 243 DYVATWNSGTLLSADLKEAISARAHKRNP---TFSKL 276
           DY+ATWN   L + D+ +++ A   KR+    TFSKL
Sbjct: 293 DYMATWNMSMLQTQDIIKSVQAAMEKRDTKSITFSKL 327

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot
Match: Q62651 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ech1 PE=1 SV=2)

HSP 1 Score: 214.2 bits (544), Expect = 1.9e-54
Identity = 117/277 (42.24%), Postives = 170/277 (61.37%), Query Frame = 0


Query: 3   DYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSG 62
           +Y+SI++   +    V H++L+RP   NA+    + EL      + ++ D R +++SG+G
Sbjct: 53  NYESIQV--TSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG 112

Query: 63  KHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGC 122
           K F +GIDL   AS+       +  R    LR  +   Q + T IE+C KPVIA IHGGC
Sbjct: 113 KMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGC 172

Query: 123 IGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAV-ELALTGRE 182
           IGGGVD+ +ACD+RYCT +A F VKEV++ + AD+GTLQRLP ++G    V EL  T R+
Sbjct: 173 IGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARK 232

Query: 183 FSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGL 242
               EA + GLVS  F  K  + N    +A +I+SKSP+AV G+K  L+ SRD +V++ L
Sbjct: 233 MMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESL 292

Query: 243 DYVATWNSGTLLSADLKEAISARAHKRNP---TFSKL 276
           DY+ATWN   L + D+ +++ A   K++    TFSKL
Sbjct: 293 DYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITFSKL 327

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot
Match: Q5RFG0 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii OX=9601 GN=ECH1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-53
Identity = 114/276 (41.30%), Postives = 168/276 (60.87%), Query Frame = 0


Query: 4   YKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSGK 63
           Y+S+++   +    V H++L+RP+  NA+    + E+    + + ++ D R +++SG+GK
Sbjct: 55  YESLRV--TSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGK 114

Query: 64  HFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGCI 123
            F AG+DL   AS+       +  R    LR  +   Q++   IE+C KPVIA +HGGCI
Sbjct: 115 MFTAGVDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAVHGGCI 174

Query: 124 GGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAV-ELALTGREF 183
           GGGVD+ TACD+RYC  +A F VKEV++ + AD+GTLQRLP ++G    V ELA T R+ 
Sbjct: 175 GGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKM 234

Query: 184 SGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGLD 243
              EA   GLVS  F  K  + +  + +A EI+SKSP+AV  TK  LL SRD +V + L+
Sbjct: 235 MADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 294

Query: 244 YVATWNSGTLLSADLKEAISARAHK---RNPTFSKL 276
           YVA+WN   L + DL +++ A       ++ TFSKL
Sbjct: 295 YVASWNMSMLQTQDLMKSVQAATENKELKSVTFSKL 328

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot
Match: Q13011 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens OX=9606 GN=ECH1 PE=1 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-53
Identity = 115/276 (41.67%), Postives = 166/276 (60.14%), Query Frame = 0


Query: 4   YKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSGK 63
           Y+S+++   +    V H++L+RP+  NA+    + E+    + + ++ D R +++SG+GK
Sbjct: 55  YESLRV--TSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGK 114

Query: 64  HFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGCI 123
            F AGIDL   AS+       +  R    LR  +   Q++   IE C KPVIA +HGGCI
Sbjct: 115 MFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCI 174

Query: 124 GGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAV-ELALTGREF 183
           GGGVD+ TACD+RYC  +A F VKEV++ + AD+GTLQRLP ++G    V ELA T R+ 
Sbjct: 175 GGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKM 234

Query: 184 SGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGLD 243
              EA   GLVS  F  K  + +  + +A EI+SKSP+AV  TK  LL SRD +V + L+
Sbjct: 235 MADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 294

Query: 244 YVATWNSGTLLSADLKEAISARAHK---RNPTFSKL 276
           YVA+WN   L + DL +++ A       +  TFSKL
Sbjct: 295 YVASWNMSMLQTQDLVKSVQATTENKELKTVTFSKL 328

[Close]

BLAST of Cp4.1LG03g12880 vs. NCBI nr
Match: XP_023526792.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535 bits (1379), Expect = 1.27e-191
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. NCBI nr
Match: XP_022956301.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita moschata] >KAG7018444.1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530 bits (1366), Expect = 1.22e-189
Identity = 271/275 (98.55%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNP+SGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPNSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE+LLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEDLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVDIATACDLRYCTAEAVFSVKE+NLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEINLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSG EAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGFEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. NCBI nr
Match: XP_022979902.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita maxima])

HSP 1 Score: 525 bits (1351), Expect = 2.36e-187
Identity = 268/275 (97.45%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNP+SGVFHLRLHRPSHYN LTTELF ELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPNSGVFHLRLHRPSHYNTLTTELFGELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVD+ATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDMATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSGLEAKELGLVS TFASKMEL+NGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGLEAKELGLVSATFASKMELENGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLSADLKEAISARAHKRNP FSKL
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPAFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. NCBI nr
Match: KAG6582020.1 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514 bits (1325), Expect = 3.25e-183
Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNP+SGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPNSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE+LLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEDLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVDIATACDLRYCTAEAVFSVKE+NLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEINLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSG EAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGFEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHK 267
           LDYVATWNSGTLLSADLKEAISARAHK
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHK 267

[Close]

BLAST of Cp4.1LG03g12880 vs. NCBI nr
Match: XP_038879593.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal isoform X1 [Benincasa hispida])

HSP 1 Score: 464 bits (1195), Expect = 1.40e-163
Identity = 236/275 (85.82%), Postives = 254/275 (92.36%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME YK IKI+RQNP+SGVFHLRLHRPSH+NALTTELFAELR+A S LDQNP+V VIILSG
Sbjct: 1   MEGYKCIKIDRQNPNSGVFHLRLHRPSHHNALTTELFAELRQAFSYLDQNPEVHVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNF  L S ERGRAGERLRRE+K MQ+SITAIEECRKPVIA IHG
Sbjct: 61  SGKHFCAGIDLKSTASNFSKLQSEERGRAGERLRREIKWMQESITAIEECRKPVIASIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVDI TACDLRYCTAEAVFSV+EV +AITADLGTLQRLP IVG+GKA ELALTGR
Sbjct: 121 GCIGGGVDIVTACDLRYCTAEAVFSVREVRMAITADLGTLQRLPRIVGYGKAAELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           +FSGLEAKELGLVS TFASK+EL++ V+KIA+EI SKSPLAVVGTKAVLLKSRDL VEQG
Sbjct: 181 DFSGLEAKELGLVSRTFASKLELEDEVLKIAQEIGSKSPLAVVGTKAVLLKSRDLNVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLS DLKEAISA+A+KRNP FSKL
Sbjct: 241 LDYVATWNSGTLLSDDLKEAISAQANKRNPVFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL
Match: A0A6J1GW60 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucurbita moschata OX=3662 GN=LOC111458038 PE=3 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 5.91e-190
Identity = 271/275 (98.55%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNP+SGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPNSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE+LLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEDLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVDIATACDLRYCTAEAVFSVKE+NLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEINLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSG EAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGFEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL
Match: A0A6J1IPZ5 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucurbita maxima OX=3661 GN=LOC111479454 PE=3 SV=1)

HSP 1 Score: 525 bits (1351), Expect = 1.14e-187
Identity = 268/275 (97.45%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYKSIKIERQNP+SGVFHLRLHRPSHYN LTTELF ELRRALSSLDQNPDVRVIILSG
Sbjct: 1   MEDYKSIKIERQNPNSGVFHLRLHRPSHYNTLTTELFGELRRALSSLDQNPDVRVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG
Sbjct: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGGVD+ATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR
Sbjct: 121 GCIGGGVDMATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           EFSGLEAKELGLVS TFASKMEL+NGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG
Sbjct: 181 EFSGLEAKELGLVSATFASKMELENGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLSADLKEAISARAHKRNP FSKL
Sbjct: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPAFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL
Match: A0A0A0KXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011790 PE=3 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.59e-162
Identity = 235/275 (85.45%), Postives = 249/275 (90.55%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           MEDYK IKIERQNP+SGVFHLRLHRPSHYNALTT+LF ELR+A S LDQNPDV VIILSG
Sbjct: 1   MEDYKCIKIERQNPNSGVFHLRLHRPSHYNALTTQLFTELRQAFSHLDQNPDVHVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE  LS ERGRAGER+RRE+K MQ+SITAIEECRKPVIA IHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEKHLSEERGRAGERIRREIKWMQESITAIEECRKPVIASIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GC+GGG+DI TACDLRYCTAEAVFSV+EV LAITADLGTLQRLP IVG+GKA ELALTGR
Sbjct: 121 GCVGGGIDIVTACDLRYCTAEAVFSVREVKLAITADLGTLQRLPRIVGYGKAAELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
            FSGLEAKELGLVS TF S  +L +GV+KIAEEIAS SPLAVVGTKAVLLKSRDL VEQG
Sbjct: 181 NFSGLEAKELGLVSRTFDSISKLQDGVLKIAEEIASSSPLAVVGTKAVLLKSRDLNVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLS DLKEAISA+A KR P FSKL
Sbjct: 241 LDYVATWNSGTLLSDDLKEAISAQASKRKPKFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL
Match: A0A5D3D1B6 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001700 PE=3 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 4.57e-162
Identity = 234/275 (85.09%), Postives = 251/275 (91.27%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME Y+ IKIERQ+P+SGVFHLRLHRPSHYNALTT+LF ELR+A S LDQNPDV VIILSG
Sbjct: 1   MEGYECIKIERQSPNSGVFHLRLHRPSHYNALTTQLFTELRQAFSRLDQNPDVHVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE  LS ERGRAGER+RRE+K MQ+SITAIEECRKPVIA IHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEKHLSEERGRAGERIRREIKWMQESITAIEECRKPVIASIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGG+DI TACDLRYCTAEAVFSV+EV LAITADLGTLQRLP IVG+GKA ELALTGR
Sbjct: 121 GCIGGGIDIVTACDLRYCTAEAVFSVREVKLAITADLGTLQRLPRIVGYGKAAELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           +FSGLEAKELGLVS TF S  EL +GV+KIAEEIAS+SPLAVVGTKAVLLKSRDL VEQG
Sbjct: 181 DFSGLEAKELGLVSRTFDSMSELQDGVLKIAEEIASRSPLAVVGTKAVLLKSRDLNVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLS DLKEAISA+A+KR P FSKL
Sbjct: 241 LDYVATWNSGTLLSDDLKEAISAQANKRKPKFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL
Match: A0A1S3BXS5 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucumis melo OX=3656 GN=LOC103494575 PE=3 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 4.57e-162
Identity = 234/275 (85.09%), Postives = 251/275 (91.27%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME Y+ IKIERQ+P+SGVFHLRLHRPSHYNALTT+LF ELR+A S LDQNPDV VIILSG
Sbjct: 1   MEGYECIKIERQSPNSGVFHLRLHRPSHYNALTTQLFTELRQAFSRLDQNPDVHVIILSG 60

Query: 61  SGKHFCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHG 120
           SGKHFCAGIDLKSTASNFE  LS ERGRAGER+RRE+K MQ+SITAIEECRKPVIA IHG
Sbjct: 61  SGKHFCAGIDLKSTASNFEKHLSEERGRAGERIRREIKWMQESITAIEECRKPVIASIHG 120

Query: 121 GCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGR 180
           GCIGGG+DI TACDLRYCTAEAVFSV+EV LAITADLGTLQRLP IVG+GKA ELALTGR
Sbjct: 121 GCIGGGIDIVTACDLRYCTAEAVFSVREVKLAITADLGTLQRLPRIVGYGKAAELALTGR 180

Query: 181 EFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQG 240
           +FSGLEAKELGLVS TF S  EL +GV+KIAEEIAS+SPLAVVGTKAVLLKSRDL VEQG
Sbjct: 181 DFSGLEAKELGLVSRTFDSMSELQDGVLKIAEEIASRSPLAVVGTKAVLLKSRDLNVEQG 240

Query: 241 LDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 275
           LDYVATWNSGTLLS DLKEAISA+A+KR P FSKL
Sbjct: 241 LDYVATWNSGTLLSDDLKEAISAQANKRKPKFSKL 275

[Close]

BLAST of Cp4.1LG03g12880 vs. TAIR 10
Match: AT5G43280.1 (delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 )

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-100
Identity = 183/276 (66.30%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME YK+++I R+N  S VFHL ++RPSH NAL+ + F E  +ALSSLDQNPDV VIILSG
Sbjct: 3   MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62

Query: 61  SGKHFCAGIDLKSTAS-NFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIH 120
           +GKHFC+GIDL S +S + ++   ++RGR+ E+LRR++K+MQ +ITAIE+CRKPVIA IH
Sbjct: 63  AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIH 122

Query: 121 GGCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTG 180
           G CIGGGVD+ TACD+RYC+ +A FS+KEV+LAI ADLGTLQRLP IVG+  A+ELALT 
Sbjct: 123 GACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTA 182

Query: 181 REFSGLEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQ 240
           R FSG EAK+LGLVS  F SK ELDNGV  IAE I  KSPLAV GTKAVLL+SR+++VEQ
Sbjct: 183 RRFSGSEAKDLGLVSKVFGSKSELDNGVTTIAEGIGGKSPLAVTGTKAVLLRSREVSVEQ 242

Query: 241 GLDYVATWNSGTLLSADLKEAISARAHKRNPTFSKL 276
           GLDYVATWNS  L+S DL EA+SA+  KR P F+KL
Sbjct: 243 GLDYVATWNSAMLISDDLNEAVSAQMMKRKPRFAKL 278

[Close]

BLAST of Cp4.1LG03g12880 vs. TAIR 10
Match: AT5G43280.2 (delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 )

HSP 1 Score: 282.0 bits (720), Expect = 5.3e-76
Identity = 140/214 (65.42%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 1   MEDYKSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSG 60
           ME YK+++I R+N  S VFHL ++RPSH NAL+ + F E  +ALSSLDQNPDV VIILSG
Sbjct: 3   MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62

Query: 61  SGKHFCAGIDLKSTAS-NFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIH 120
           +GKHFC+GIDL S +S + ++   ++RGR+ E+LRR++K+MQ +ITAIE+CRKPVIA IH
Sbjct: 63  AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIH 122

Query: 121 GGCIGGGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTG 180
           G CIGGGVD+ TACD+RYC+ +A FS+KEV+LAI ADLGTLQRLP IVG+  A+ELALT 
Sbjct: 123 GACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTA 182

Query: 181 REFSGLEAKELGLVSTTFASKMELDNGVIKIAEE 214
           R FSG EAK+LGLVS  F SK ELDNGV  IAE+
Sbjct: 183 RRFSGSEAKDLGLVSKVFGSKSELDNGVTTIAED 216

[Close]

BLAST of Cp4.1LG03g12880 vs. TAIR 10
Match: AT4G16800.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-28
Identity = 86/269 (31.97%), Postives = 131/269 (48.70%), Query Frame = 0


Query: 7   IKIERQNPS-SGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIIL-SGSGKH 66
           +K+ R + S SG+  + L RP   NA+  E+   L+ A  S+ Q+   RV+++ S     
Sbjct: 43  VKLNRLSGSDSGIIEVNLDRPVTKNAINKEMLKSLQNAFESIHQDNSARVVMIRSLVPGV 102

Query: 67  FCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGCIG 126
           FCAG DLK             R  +   +   V +++   + IE    P IA I G  +G
Sbjct: 103 FCAGADLK-----------ERRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALG 162

Query: 127 GGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGREFSG 186
           GG+++A ACDLR C   AVF + E  LAI    G  QRL  +VG   + EL  TGR+   
Sbjct: 163 GGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDA 222

Query: 187 LEAKELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVLLKSRDLTVEQGLDYV 246
           +EA   GLV+    +  E     I++A++I  K PLA+   K  + +  +  +  GL+  
Sbjct: 223 IEAANKGLVNICVTAG-EAHEKAIEMAQQINEKGPLAIKMAKKAIDEGIETNMASGLEVE 282

Query: 247 ATWNSGTLLSADLKEAISARAHKRNPTFS 274
                  L + D  E ++A A KR P ++
Sbjct: 283 EMCYQKLLNTQDRLEGLAAFAEKRKPLYT 299

[Close]

BLAST of Cp4.1LG03g12880 vs. TAIR 10
Match: AT4G16210.1 (enoyl-CoA hydratase/isomerase A )

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-20
Identity = 65/222 (29.28%), Postives = 107/222 (48.20%), Query Frame = 0


Query: 9   IERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSGKHFCAG 68
           I+ +  S G+  + ++RP   N+LT  +  +L +A   +D +  V+V+I +GSG+ FC+G
Sbjct: 10  IQVKKESGGIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRSFCSG 69

Query: 69  IDLKSTASNFENLLSSERGRAGERLRREVKAMQ-DSITAIEECRKPVIACIHGGCIGGGV 128
           +DL +  S F+                +VK  + D +  +E  RKP+I  I+G  I  G 
Sbjct: 70  VDLTAAESVFKG---------------DVKDPETDPVVQMERLRKPIIGAINGFAITAGF 129

Query: 129 DIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGREFSGLEA 188
           ++A ACD+   +  A F        I    G  Q+L  I+G  KA E++LT    +   A
Sbjct: 130 ELALACDILVASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVA 189

Query: 189 KELGLVSTTFASKMELDNGVIKIAEEIASKSPLAVVGTKAVL 230
            +LG V+     + E      +IAE I       V+  K+V+
Sbjct: 190 GKLGFVNHV-VEEGEALKKAREIAEAIIKNEQGMVLRIKSVI 215

[Close]

BLAST of Cp4.1LG03g12880 vs. TAIR 10
Match: AT4G29010.1 (Enoyl-CoA hydratase/isomerase family )

HSP 1 Score: 85.5 bits (210), Expect = 7.3e-17
Identity = 53/189 (28.04%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 5   KSIKIERQNPSSGVFHLRLHRPSHYNALTTELFAELRRALSSLDQNPDVRVIILSGSGKH 64
           K I +  +  + GV  + +  P   N+L + + + L+      +Q  DV+ I+L G+   
Sbjct: 3   KKIGVTMEVGNDGVAVITISNPP-VNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR 62

Query: 65  FCAGIDLKSTASNFENLLSSERGRAGERLRREVKAMQDSITAIEECRKPVIACIHGGCIG 124
           F  G D+        N+           L  EV +++     +E+ RKPV+A + G  +G
Sbjct: 63  FSGGFDI--------NVFQQVHKTGDLSLMPEV-SVELVCNLMEDSRKPVVAAVEGLALG 122

Query: 125 GGVDIATACDLRYCTAEAVFSVKEVNLAITADLGTLQRLPGIVGFGKAVELALTGREFSG 184
           GG+++A AC  R    +A   + E+ L +    G  QRLP +VG  KA ++ L  +  S 
Sbjct: 123 GGLELAMACHARVAAPKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISS 181

Query: 185 LEAKELGLV 194
            E  +LGL+
Sbjct: 183 EEGHKLGLI 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHR8	1.9e-99	66.30	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Arabidopsis thaliana...	[more]
O35459	6.6e-55	41.88	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10...	[more]
Q62651	1.9e-54	42.24	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus ...	[more]
Q5RFG0	3.6e-53	41.30	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii OX=96...	[more]
Q13011	6.1e-53	41.67	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens OX=96...	[more]

BLAST of Cp4.1LG03g12880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526792.1	1.27e-191	100.00	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita pepo subsp. ...	[more]
XP_022956301.1	1.22e-189	98.55	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita moschata] >K...	[more]
XP_022979902.1	2.36e-187	97.45	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Cucurbita maxima]	[more]
KAG6582020.1	3.25e-183	98.50	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal, partial [Cucurbita arg...	[more]
XP_038879593.1	1.40e-163	85.82	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal isoform X1 [Benincasa h...	[more]

BLAST of Cp4.1LG03g12880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GW60	5.91e-190	98.55	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucurbita moschata O...	[more]
A0A6J1IPZ5	1.14e-187	97.45	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucurbita maxima OX=...	[more]
A0A0A0KXB8	1.59e-162	85.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011790 PE=3 SV=1	[more]
A0A5D3D1B6	4.57e-162	85.09	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucumis melo var. ma...	[more]
A0A1S3BXS5	4.57e-162	85.09	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal OS=Cucumis melo OX=3656...	[more]

BLAST of Cp4.1LG03g12880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43280.1	1.4e-100	66.30	delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1	[more]
AT5G43280.2	5.3e-76	65.42	delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1	[more]
AT4G16800.1	2.4e-28	31.97	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT4G16210.1	4.1e-20	29.28	enoyl-CoA hydratase/isomerase A	[more]
AT4G29010.1	7.3e-17	28.04	Enoyl-CoA hydratase/isomerase family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.226.10		coord: 1..217 e-value: 2.2E-64 score: 218.8
None	No IPR available	CDD	cd06558	crotonase-like	coord: 7..214 e-value: 2.60643E-55 score: 175.056
IPR014748	Enoyl-CoA hydratase, C-terminal	GENE3D	1.10.12.10		coord: 218..275 e-value: 3.6E-25 score: 89.9
IPR001753	Enoyl-CoA hydratase/isomerase	PFAM	PF00378	ECH_1	coord: 15..273 e-value: 8.4E-50 score: 169.4
IPR045002	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase Ech1-like	PANTHER	PTHR43149	ENOYL-COA HYDRATASE	coord: 2..275
IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	PROSITE	PS00166	ENOYL_COA_HYDRATASE	coord: 115..135
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 3..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12880.1	Cp4.1LG03g12880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044281	small molecule metabolic process
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0051750	delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function	GO:0003824	catalytic activity