Cp4.1LG03g12300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g12300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RAB GTPase homolog A5D
Location	Cp4.1LG03: 10289697 .. 10292299 (-)
RNA-Seq Expression	Cp4.1LG03g12300
Synteny	Cp4.1LG03g12300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATACATACATACATATATACATATATATATAATCTGAAAGAGATGGTGGAGGGAAGGCACTACCACTAGCGCTACATGCGCAGTTTGTCTCTCTGCCAGCTCTGCTTCTTCAACCTCCGCCATTCCATTCCATTATTGCTCTTCTTTTTCTCTCTCTAAAAGCTTGCTGTCACATCTTCCCAACTCCATCCTCTTCCTTCCTTCCTTCCTTCCTTCCACAATCTCGATAATCGAACCCCCGAATCCCTAGAAGGAATCAGAAGAAACAGAGAGGGACAAACGCGCACAATCGAAGCCTACGCAATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGAGTGAGTGCCTTACTCAGACTTACCTTTTTCTTTTGATGTTGTTCTTGCTCTGCCATTTTAGTTGAGATGTATAGATCTGAACTCTTCTCTTTTTCGAATTTTGTTGGGAGTGATTTCATTTCCTGTTCGCTGCTGTATTTTATTCCATACTGACCTAGGCTCGTTACATCCTCTAAAAGATTTCGTTCAATTACTTGGACTAACAACATCATATGAAAGAGATTGCAGGTCTTGATTCTTGAACTTTGCAATAATCCAGATCTAGTCCTGTATCGTATTTTCTCTGAAAAATTACTACCGACTTTGTAATGAATTTCTGTTTGTCGGATTTAGCTTCTTCATTTCCCCTGAAAATTACACTTATTAGCATCCAATTCGATATTGCTTTCAAAACTGTAATCGGAAATATCTATATTTCGTTCTCAGATTTCAAATTACTCTCACATTTTCAAGCTTTGATTCTCTCGAGTTTCAAATGTTGGTGTCGGCAACTCACAATTCAATGCCAATAAAACTACTTCTTAGCATAGCTGATTAAAATCAATATGTAGAACTTACCAACTCATATTTCACCTATTTGGCTTTTCAGATTGATCAATGAATCTGTACTGTCACTTGAGATCTTATAAAACTTCTGGTTTAGACGTCCTTTGAGTAATTGCTCATAATTTAGATGTATTCATTCCTATATGACTGATTATATTAAAATTTTCAGTTGCTTTGAGTATGCCATTTTGATCGAAAGTTCAGTTCCTTTCATGGAAATGAAATTACTCAATGCTGCTAATGATGCTAATGATGCTAATGATGCTATCCCCTCATAGCCTCACCTTGTAGTTGAGAACATGCTGGTTTAAATCCTATTTTGAACCCTAAACTCTTGACACTTGCTCTCTTGGGTCCTTGTACTTTTGAAATATTTGGTTTCCTCCCTAAACTCTTGACACTTTCTATTGTATTTAACATAAATCTTGGTTTATGGTATGGGTGGATAGTTGTTGATGCAGACCTTGGGTAGATATGAATTTGATGCAAATTTTCATCCGAGAATCAAATTTGCTGTTTCCCATTGTGGTGAAGCGAGTTTGTAGTATCATGAAAATAACATCTCGTGATAAGAGAGATGGGTCGAACCATCAACTTTTAGGATGGTAATTGGTATCTTAATTCCGGTAGATGACCCGACTGTGATATAGTGGGCACAAAGTTATCTGTCTGTTCCACTGTATATTTCTTAGAGTTGTTGTTCTTTCCCATTTTTAATGATGAATTTATGCTATCAAGTTGCTTAAATGATCAGAGTTTTGATTCGAATCATTATGCAGCTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGATCTTCATCTCTTCATGTTGGGTTCTGCTTAGTTTCTTCTGTCTTGTTTTGCTGGTGTGGTGCATTCAAATTGGTTGTTTTTCTATGTTTGTTTCCATTATTATAGCTTCCTCTAAAAGCTCCTCCTAGATCGACCATTTCCATATATAGAAATGAAATTATTTATTTGAATTTAATTAAAGACAAGAAGAAACATTTTTGTATTAATTATATTATTATTTGAAGCAAATATGAACAGATTTATTAAGTTTGTAAAGTGAATCATGATCAATAGGATCTTCCATGTTCACATGTTCTAATTATTGCTTCTTCTTTTTTTT

mRNA sequence

ACATACATACATACATATATACATATATATATAATCTGAAAGAGATGGTGGAGGGAAGGCACTACCACTAGCGCTACATGCGCAGTTTGTCTCTCTGCCAGCTCTGCTTCTTCAACCTCCGCCATTCCATTCCATTATTGCTCTTCTTTTTCTCTCTCTAAAAGCTTGCTGTCACATCTTCCCAACTCCATCCTCTTCCTTCCTTCCTTCCTTCCTTCCACAATCTCGATAATCGAACCCCCGAATCCCTAGAAGGAATCAGAAGAAACAGAGAGGGACAAACGCGCACAATCGAAGCCTACGCAATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGACTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGATCTTCATCTCTTCATGTTGGGTTCTGCTTAGTTTCTTCTGTCTTGTTTTGCTGGTGTGGTGCATTCAAATTGGTTGTTTTTCTATGTTTGTTTCCATTATTATAGCTTCCTCTAAAAGCTCCTCCTAGATCGACCATTTCCATATATAGAAATGAAATTATTTATTTGAATTTAATTAAAGACAAGAAGAAACATTTTTGTATTAATTATATTATTATTTGAAGCAAATATGAACAGATTTATTAAGTTTGTAAAGTGAATCATGATCAATAGGATCTTCCATGTTCACATGTTCTAATTATTGCTTCTTCTTTTTTTT

Coding sequence (CDS)

ATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGACTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGA

Protein sequence

MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR

Homology

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BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot
Match: Q9SIP0 (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-97
Identity = 183/216 (84.72%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR V+VEEG +LAE EG FFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVKDGGSKQSESY-LSCCS 217
           LNSDTYK ELS+ NRVSLVKD     ++ +  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot
Match: P19892 (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.1e-95
Identity = 181/216 (83.80%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR V+VEEG +LAE EG FF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKD--GGSKQSESYLSCCS 217
           LNSDTYK EL+VNRVSLVKD    SKQS  + SCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 216

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot
Match: P28187 (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 6.3e-93
Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA+M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR V+VEEG SLAE+EG FFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           LNSD+YK EL+VNRVSLVK+    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot
Match: Q9SRS5 (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-87
Identity = 167/214 (78.04%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA+MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR V+VEEG +LAE EG FFMETSALD+TNV KAFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVKD-GGSKQSESYLSCCSR 218
           SD YKAELSVNRVSLV +  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot
Match: Q9FGK5 (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-71
Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+V+  EG +LAEA+G FFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELSVNRVSLVKDGGSKQSESYLSCCS 217
           +S        A LS  +  ++   G  + +    CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: XP_022956237.1 (ras-related protein RABA5d-like [Cucurbita moschata] >XP_023527306.1 ras-related protein RABA5d-like [Cucurbita pepo subsp. pepo] >KAG6582090.1 Ras-related protein RABA5d, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018505.1 Ras-related protein RABA5d [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1089), Expect = 2.38e-149
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: XP_022979928.1 (ras-related protein RABA5d-like [Cucurbita maxima])

HSP 1 Score: 421 bits (1083), Expect = 1.95e-148
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLVKDGG KQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVKDGGLKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: XP_008453919.1 (PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related protein RABA5d [Cucumis melo var. makuwa] >TYK16951.1 ras-related protein RABA5d [Cucumis melo var. makuwa])

HSP 1 Score: 412 bits (1060), Expect = 6.28e-145
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDVTVEEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: XP_022932589.1 (ras-related protein RABA5d-like [Cucurbita moschata])

HSP 1 Score: 412 bits (1058), Expect = 1.27e-144
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDL+NIRDV++EEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: XP_038876476.1 (ras-related protein RABA5d-like [Benincasa hispida])

HSP 1 Score: 411 bits (1056), Expect = 2.56e-144
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDVTVEEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSE Y SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL
Match: A0A6J1GVS1 (ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111457991 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 1.15e-149
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL
Match: A0A6J1IXQ6 (ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111479471 PE=4 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 9.47e-149
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLVKDGG KQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVKDGGLKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL
Match: A0A5A7TS03 (Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00890 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 3.04e-145
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDVTVEEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL
Match: A0A1S3BXI0 (ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 3.04e-145
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDVTVEEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL
Match: A0A6J1EXF0 (ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE=4 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 6.13e-145
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
           RMLVGNKCDL+NIRDV++EEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 217
           KVLNSDTYKAELSVNRVSLV +GGSKQSESYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR 10
Match: AT2G31680.1 (RAB GTPase homolog A5D )

HSP 1 Score: 356.3 bits (913), Expect = 1.7e-98
Identity = 183/216 (84.72%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR V+VEEG +LAE EG FFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVKDGGSKQSESY-LSCCS 217
           LNSDTYK ELS+ NRVSLVKD     ++ +  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR 10
Match: AT1G05810.1 (RAB GTPase homolog A5E )

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-96
Identity = 181/216 (83.80%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVARM
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR V+VEEG +LAE EG FF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDTYKAELSVNRVSLVKD--GGSKQSESYLSCCS 217
           LNSDTYK EL+VNRVSLVKD    SKQS  + SCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 259

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR 10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 4.4e-94
Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA+M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR V+VEEG SLAE+EG FFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           LNSD+YK EL+VNRVSLVK+    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR 10
Match: AT3G07410.1 (RAB GTPase homolog A5B )

HSP 1 Score: 324.3 bits (830), Expect = 7.3e-89
Identity = 167/214 (78.04%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA+MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR V+VEEG +LAE EG FFMETSALD+TNV KAFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVKD-GGSKQSESYLSCCSR 218
           SD YKAELSVNRVSLV +  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR 10
Match: AT5G47520.1 (RAB GTPase homolog A5A )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+V+  EG +LAEA+G FFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELSVNRVSLVKDGGSKQSESYLSCCS 217
           +S        A LS  +  ++   G  + +    CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIP0	2.5e-97	84.72	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
P19892	5.1e-95	83.80	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
P28187	6.3e-93	81.40	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
Q9SRS5	1.0e-87	78.04	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
Q9FGK5	1.8e-71	64.52	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of Cp4.1LG03g12300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956237.1	2.38e-149	100.00	ras-related protein RABA5d-like [Cucurbita moschata] >XP_023527306.1 ras-related...	[more]
XP_022979928.1	1.95e-148	99.54	ras-related protein RABA5d-like [Cucurbita maxima]	[more]
XP_008453919.1	6.28e-145	97.24	PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related p...	[more]
XP_022932589.1	1.27e-144	96.31	ras-related protein RABA5d-like [Cucurbita moschata]	[more]
XP_038876476.1	2.56e-144	96.77	ras-related protein RABA5d-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g12300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVS1	1.15e-149	100.00	ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111457991 PE...	[more]
A0A6J1IXQ6	9.47e-149	99.54	ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111479471 PE=4...	[more]
A0A5A7TS03	3.04e-145	97.24	Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BXI0	3.04e-145	97.24	ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1	[more]
A0A6J1EXF0	6.13e-145	96.31	ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE...	[more]

BLAST of Cp4.1LG03g12300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31680.1	1.7e-98	84.72	RAB GTPase homolog A5D	[more]
AT1G05810.1	3.6e-96	83.80	RAB GTPase homolog A5E	[more]
AT2G43130.1	4.4e-94	81.40	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G07410.1	7.3e-89	78.04	RAB GTPase homolog A5B	[more]
AT5G47520.1	1.3e-72	64.52	RAB GTPase homolog A5A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 42.4 coord: 14..35 score: 50.36 coord: 117..130 score: 50.82 coord: 55..77 score: 53.91 coord: 37..53 score: 33.77
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..208 e-value: 9.8E-5 score: 18.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 2.2E-26 score: 103.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.2E-103 score: 359.4
None	No IPR available	PANTHER	PTHR47979:SF30	RAS-RELATED PROTEIN RABA5C	coord: 1..217
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 33.732189
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..183 score: 10.228296
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 9.15721E-107 score: 302.172
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 2.8E-13 score: 49.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 1.4E-59 score: 200.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 15.720572
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..207 e-value: 6.3E-67 score: 226.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..185
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.9E-36 score: 123.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12300.1	Cp4.1LG03g12300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding