Cp4.1LG03g11760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCATTTCACTTGAATCTCTCCCTTTCCTCCCTCCTCAAGCTATTTTCTCTCTCTCTTTCTGTCTCTGTCTCCTTATAAATTGGTGACCTATTTCCATTGGTTCCACACAAAATCCTTCATGAAACCCTCTGTCTCTCTCTCTTCCTCTTAGGGTTTTGAGTAAATTTGCAGAGAAATGGAAGATTTCAATGGTTTAGGGTATGGGGACACCTTCTGTTCACCCCATGATCAACAGGTAACTTTTCCCACTTTCCATCTAAAATTCAAATCCTTCAATTTTTTACTTTTAACCATGGGTTAAACAAATATTATTTTTAATTTAAATAGCCCAGAAAACTAACCCATCATCCTGACGACATGTCGGNTTTTAAAAAAAAAAAAAAAAAAAAATCTGTAACGGCTTGACGTTAGTGACTCCGCTGTCCACTAACAGCGTCTTGACGCCGTTTCCTGGTTGCTGACCTGTCAAAAACCGGATCACGTGGAATCTCTTCTGTCTTCAACCCTCTAAACACTCGTTTGCCAACGTGGAATTTTCATTTTCTTATTCATTAATATTAATTATTGTTATTATTAGGCAATGTCCGGGGGGAGTAAGTACGGAGGTTTGGTGCCAAGGAAGAAGCCCTTGATCTCAAAGGTCAATTAACAAACTTAAAATCCTTTTTATTTTATTCGTAATTAAAAATTACAATATATAAATAAAATTTAGTCTCTGTGTAATATTAACATAAAAATTCAATTTATTTTTAATACATTAATTAAATTCAAATTTTATATTTTAAATAAGAGTGAAAAGTGGTGTTTGGATGCAGGATAAGGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTATGCAAGGTGATTCCCTAAACCGAATAAGAATAAGACATCTTCTTGTGCCCAAACATATAGGAATAAGAATATGGGCTGGCCCATGTTTCATGAACCTTGGCCCACTCATAAAATAAATAAATTAATAAAATAATAAATTTAATGAATTATTTTTATTTTGTGGATATTAATATGAAAATTAAAGCAAGGGGCTGGTGGAGGGCATCATAAAACAATGGCAATGGTGGAGACTCTGCGACCGAAACTACAGGTAACCTCGCCTTAAATAATAATAAATTTTATTATTAAATTGGTGTAATATGTTAATTAATGGAAATTAATTTTATAATTTGCAGAGAACCCAACGCCAGCAGCTTCCTCCTCGGCGACCCGCTTGCACCTCGGGACAAGACAACCTTGTACCGGTAAAATATATACTAAATTTATTTTATTTTATTTTGTTTTATTTATTTATTTATTTATTTATTCTTACACGCCTTTCATTTTAAATTATATATATTTCCATTAAATAATTAGAAATATTATTGAATGTTTTATTATTATTTTTTTTTTATCTTTTTAATTTAATTTTAGTTTATTGTTTTTGCAGGAAGATTGATATTTATATTTCCATTAAATAATTAAAATGACGTTGGAGCTTACTTCGTTGCCTTTTTATTTTTTTATTTTTATTTTTATTTTTTTGAGATTGTCTTTTTCTTCCATAATTAGCTGAAAGGAAATGTGTAAATAAACTATTTATTTAGTAACAAATCAACGGAAATTTTATGGGTTTATATTTTCTTGAGAAACGTTTTTTAAATTATTAATAAATTATGATTTTTTCCACATTTTTTTAATAAAGATATTAACAAAATACTCTTTTAACGATGTTAATCAAGGTAACACGATCATATCATAGAAATGTAGGAGAATATCGAAGCCATGAAATACGAAATCTAGATTTCAAATCCCATTTCATGTGATGGGCATGTGCGTTACAATATTTTTTTGGCTTGATTCTCTATGAGATCCCACGTCGGTTGGAGATGGAATCAAAACATTTCTTTTAAGGGTGTGAAAACCTCTCCCTAGATGACGCGTTTTAAAATCATGAGGCTGACGACGTTACATAACGAGCTAAAACAGTCAATATTTGCAAACGGTGAGCTCGAGCTGTTACAAATGGTATCAAAGGCAGACATCAGGTGGTATGTCAACAAGGACGCTAGGCCCTCAAGGGAGGTGGA TTTTCATTTCACTTGAATCTCTCCCTTTCCTCCCTCCTCAAGCTATTTTCTCTCTCTCTTTCTGTCTCTGTCTCCTTATAAATTGGTGACCTATTTCCATTGGTTCCACACAAAATCCTTCATGAAACCCTCTGTCTCTCTCTCTTCCTCTTAGGGTTTTGAGTAAATTTGCAGAGAAATGGAAGATTTCAATGGTTTAGGGTATGGGGACACCTTCTGTTCACCCCATGATCAACAGGCAATGTCCGGGGGGAGTAAGTACGGAGGTTTGGTGCCAAGGAAGAAGCCCTTGATCTCAAAGGATAAGGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTATGCAAGCAAGGGGCTGGTGGAGGGCATCATAAAACAATGGCAATGGTGGAGACTCTGCGACCGAAACTACAGAGAACCCAACGCCAGCAGCTTCCTCCTCGGCGACCCGCTTGCACCTCGGGACAAGACAACCTTGTACCGGAAGATTGATATTTATATTTCCATTAAATAATTAAAATGACGTTGGAGCTTACTTCGTTGCCTTTTTATTTTTTTATTTTTATTTTTATTTTTTTGAGATTGTCTTTTTCTTCCATAATTAGCTGAAAGGAAATGTGTAAATAAACTATTTATTTAGTAACAAATCAACGGAAATTTTATGGGTTTATATTTTCTTGAGAAACGTTTTTTAAATTATTAATAAATTATGATTTTTTCCACATTTTTTTAATAAAGATATTAACAAAATACTCTTTTAACGATGTTAATCAAGGTAACACGATCATATCATAGAAATGTAGGAGAATATCGAAGCCATGAAATACGAAATCTAGATTTCAAATCCCATTTCATGTGATGGGCATGTGCGTTACAATATTTTTTTGGCTTGATTCTCTATGAGATCCCACGTCGGTTGGAGATGGAATCAAAACATTTCTTTTAAGGGTGTGAAAACCTCTCCCTAGATGACGCGTTTTAAAATCATGAGGCTGACGACGTTACATAACGAGCTAAAACAGTCAATATTTGCAAACGGTGAGCTCGAGCTGTTACAAATGGTATCAAAGGCAGACATCAGGTGGTATGTCAACAAGGACGCTAGGCCCTCAAGGGAGGTGGA ATGGAAGATTTCAATGGTTTAGGGTATGGGGACACCTTCTGTTCACCCCATGATCAACAGGCAATGTCCGGGGGGAGTAAGTACGGAGGTTTGGTGCCAAGGAAGAAGCCCTTGATCTCAAAGGATAAGGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTATGCAAGCAAGGGGCTGGTGGAGGGCATCATAAAACAATGGCAATGGTGGAGACTCTGCGACCGAAACTACAGAGAACCCAACGCCAGCAGCTTCCTCCTCGGCGACCCGCTTGCACCTCGGGACAAGACAACCTTGTACCGGAAGATTGA MEDFNGLGYGDTFCSPHDQQAMSGGSKYGGLVPRKKPLISKDKERAFFDSADWALCKQGAGGGHHKTMAMVETLRPKLQRTQRQQLPPRRPACTSGQDNLVPED Homology
BLAST of Cp4.1LG03g11760 vs. NCBI nr
Match: XP_023526678.1 (uncharacterized protein LOC111790104 [Cucurbita pepo subsp. pepo] >KAG6582183.1 hypothetical protein SDJN03_22185, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221 bits (563), Expect = 7.81e-73 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. NCBI nr
Match: KAG7018580.1 (hypothetical protein SDJN02_20450 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 217 bits (552), Expect = 4.52e-71 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. NCBI nr
Match: XP_022955946.1 (uncharacterized protein LOC111457780 isoform X2 [Cucurbita moschata]) HSP 1 Score: 216 bits (551), Expect = 5.46e-71 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. NCBI nr
Match: XP_022979990.1 (uncharacterized protein LOC111479518 isoform X2 [Cucurbita maxima]) HSP 1 Score: 214 bits (544), Expect = 6.19e-70 Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. NCBI nr
Match: XP_022955945.1 (uncharacterized protein LOC111457780 isoform X1 [Cucurbita moschata]) HSP 1 Score: 213 bits (541), Expect = 3.28e-69 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. ExPASy TrEMBL
Match: A0A6J1GV84 (uncharacterized protein LOC111457780 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457780 PE=3 SV=1) HSP 1 Score: 216 bits (551), Expect = 2.65e-71 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. ExPASy TrEMBL
Match: A0A6J1IUW8 (uncharacterized protein LOC111479518 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479518 PE=3 SV=1) HSP 1 Score: 214 bits (544), Expect = 3.00e-70 Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. ExPASy TrEMBL
Match: A0A6J1GWH2 (uncharacterized protein LOC111457780 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457780 PE=3 SV=1) HSP 1 Score: 213 bits (541), Expect = 1.59e-69 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. ExPASy TrEMBL
Match: A0A6J1IY43 (uncharacterized protein LOC111479518 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479518 PE=3 SV=1) HSP 1 Score: 210 bits (534), Expect = 1.69e-68 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. ExPASy TrEMBL
Match: A0A1S3AX63 (uncharacterized protein LOC103483882 OS=Cucumis melo OX=3656 GN=LOC103483882 PE=3 SV=1) HSP 1 Score: 182 bits (461), Expect = 1.34e-57 Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. TAIR 10
Match: AT4G16146.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 112.1 bits (279), Expect = 2.7e-25 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. TAIR 10
Match: AT1G69510.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. TAIR 10
Match: AT1G69510.3 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. TAIR 10
Match: AT1G69510.2 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Cp4.1LG03g11760 vs. TAIR 10
Match: AT5G64130.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14 Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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