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Cp4.1LG03g10520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAATGAAGAGGGGTAATTGTGGAAATTTGTGTCTAACCTTAATTTTTAATTTTTGAAGTATGTAGAGACTCCAGGTCCTCGTCCTCTTAACCGCAAGCGATCTTTAGTCCCCTGTGCATTCAGAAACGAAACCAACCGTGTTTTTAGTTTTCTCATTTTCCGATCAACGATTTACAAAATGCTCGCTGTCTTCGACAAATCGGTGGCCAAAAGTCCCGAGGCGCTGCGGAGCCCTGCATCCGATTCCGTCTGGGCTCTCAAGGATGGAATTCTTGCCCGCCATTTTAGCTCCGTGTACCCTGGTTCTGTCATCGTCAATCTCGGATCCGCCGGTCTCTTGGCCTATTCCGTCGAAAAGCAAAACCCTCTCCTCCCGAGGTATTACGATTACCGTTCATCTTTTTCTGCAATGTTTTGGGGAAACCTGTATTGTTCGTCTCTGCCTTCTTTTCATTTTTTTTTTTCTGGATCTGATCACTGTTCTTGTTAACTTATTGTACCCCGGCGGTGTCTTCCATAGGGTGTTTCGTTTTGTGTTGATGAGAATCTGTTTAAATTTAACAAAGTAGAGTTTTCTTTGTTTATTTTGATTTTTTTTTTTCTTTTTGGTATGAAATTGTATCGTCTATTTGTGTGGTGGTTGAGTTTTGGTTGAGAAATGTTTGTATTCATTAAGGCCATTGTTGTGTTTTCTTTTCTTCGATTTGCTCGAACTTTTTTCATTTTGACTCGATCGAATTTATGGAAGGTTATCTTTCGAGATCGGTGTTTAGTTTTATCAATCCTCTCTTTGCTCATCTAATTTGAAACGATTAATCTTGTTTTGCATCCTCAACCAAGATTACGGGATTCTTAGTTTGGCCATATTCTTCTGCACTTTATAAATCATTATTAATTTTTATGGGATCTGTATTGAATCTTGTTTTGCTTGTATTTTCGTTCTTATACGAGCATTTGCTAGTTTTGCCTGCTGTTGGAAAATGATGAAATTTGTTTTTATAACATTAGATTATTTGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGCTCAAGCAACAATATGGTTTGAACAAAGCTGCAAACGAGGTTAGCATCGTTATTGAAGCGTATAGAACATTAAGAGATCGGGGTCCGTACCCAGTTGATCAAGTCGTGAGAGATATTCAAGGAAAATTTGTGTTCGTCCTATATGACAGTTCCTCAAAAACTGCATTTTTGGCTTCTGTAAGTTTCCTTGATCCCTTAGTTTAACCATGATTGTGGCAAATTTCCGTTGTTATTGTTAATCTAGTTTTTTCCTTTATGTTTTCTTACCATCAGGATGCTGATGGGAGCGTTCCCTTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTCGAAATTATGAAGAAGGGGTGTGGAAAATCTTTTGCTCCTTTCCCCACAGGTAACCTTTTATGGGAATGAATTCATTATGTCTTCAAATGTGAGGGGGAAATTGACGAGCACTTTAATTTTTTAAAAATTGGTGCATTGATATAGCTTGCATCCTATCAGTTCTTGCTCACTCTTGTTCACTCTTGCTATCACGTTAATGCATGTTTCCAAATTGAGTATATTTTTTTTAGTTCAACCGTTGTTGGGTTCGGGAATTGAACCATTGACATTTAGGATGGTAGTTACAATGAATTACTGGTACTAGTCATCAATTCTTGCTCACTCTTGTTCTATCACGACAATGCATGTTTCCAAATTGAGTATATTTTGTGTAGTTTAGCAGTTGAGGGTTGGGGAATTGAACCATCGACATTTAGGATGGTAGTTACAATGAGTTACGGGTACTAGTCATTAGTTCTTGCTCACTCTTGTTCTATCACGGCAATGCATGTTTCCAAATTGAGTATATTTTGTGTAGTTCAACAGTTGAGGGTTGGGGAATTGAACCATCGACATTTAAAATGGTAGTAATACAGGTACTGGTATCAATGTTCATTTTATGCAATATGTTTGGTATTTTAGGTTGCTTCTTCACAACCTCGGGTGGGTTGAGAAGTTTTGAGCATCCTCTTAATGAGGTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCGATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGTATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTACAGACTACTGAGTGCATGATTTGGCAAGGCTTTGCTTACTTTGCCTTACCCTTCCTCCGGCTTCTTTCCATATTTCCATCCCACCAATTGTGCCTTCTAAATGGGTACTGAGGTTTATACTTTACTTTCCCTAATGGCATGTCCGTGCAGTTAACAACTACTTATATCTTATGAATCCTGTTGGCTTAACCGAGTTACATTCTGGTTTAAACTTTACTTTAACTGTAGCTTTGGATTTATGGCAATAAAGTTGCTGCTTGCCAACTGCTGCATATTTAGGATTATCTTAATACAGCTGGGATTTGATATTTATCCCGATTTTAATATTCCAACATCA AGAAATGAAGAGGGGTAATTGTGGAAATTTGTGTCTAACCTTAATTTTTAATTTTTGAAGTATGTAGAGACTCCAGGTCCTCGTCCTCTTAACCGCAAGCGATCTTTAGTCCCCTGTGCATTCAGAAACGAAACCAACCGTGTTTTTAGTTTTCTCATTTTCCGATCAACGATTTACAAAATGCTCGCTGTCTTCGACAAATCGGTGGCCAAAAGTCCCGAGGCGCTGCGGAGCCCTGCATCCGATTCCGTCTGGGCTCTCAAGGATGGAATTCTTGCCCGCCATTTTAGCTCCGTGTACCCTGGTTCTGTCATCGTCAATCTCGGATCCGCCGGTCTCTTGGCCTATTCCGTCGAAAAGCAAAACCCTCTCCTCCCGAGATTATTTGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGCTCAAGCAACAATATGGTTTGAACAAAGCTGCAAACGAGGTTAGCATCGTTATTGAAGCGTATAGAACATTAAGAGATCGGGGTCCGTACCCAGTTGATCAAGTCGTGAGAGATATTCAAGGAAAATTTGTGTTCGTCCTATATGACAGTTCCTCAAAAACTGCATTTTTGGCTTCTGATGCTGATGGGAGCGTTCCCTTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTCGAAATTATGAAGAAGGGGTGTGGAAAATCTTTTGCTCCTTTCCCCACAGGTTGCTTCTTCACAACCTCGGGTGGGTTGAGAAGTTTTGAGCATCCTCTTAATGAGGTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCGATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGTATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTACAGACTACTGAGTGCATGATTTGGCAAGGCTTTGCTTACTTTGCCTTACCCTTCCTCCGGCTTCTTTCCATATTTCCATCCCACCAATTGTGCCTTCTAAATGGGTACTGAGGTTTATACTTTACTTTCCCTAATGGCATGTCCGTGCAGTTAACAACTACTTATATCTTATGAATCCTGTTGGCTTAACCGAGTTACATTCTGGTTTAAACTTTACTTTAACTGTAGCTTTGGATTTATGGCAATAAAGTTGCTGCTTGCCAACTGCTGCATATTTAGGATTATCTTAATACAGCTGGGATTTGATATTTATCCCGATTTTAATATTCCAACATCA ATGCTCGCTGTCTTCGACAAATCGGTGGCCAAAAGTCCCGAGGCGCTGCGGAGCCCTGCATCCGATTCCGTCTGGGCTCTCAAGGATGGAATTCTTGCCCGCCATTTTAGCTCCGTGTACCCTGGTTCTGTCATCGTCAATCTCGGATCCGCCGGTCTCTTGGCCTATTCCGTCGAAAAGCAAAACCCTCTCCTCCCGAGATTATTTGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGCTCAAGCAACAATATGGTTTGAACAAAGCTGCAAACGAGGTTAGCATCGTTATTGAAGCGTATAGAACATTAAGAGATCGGGGTCCGTACCCAGTTGATCAAGTCGTGAGAGATATTCAAGGAAAATTTGTGTTCGTCCTATATGACAGTTCCTCAAAAACTGCATTTTTGGCTTCTGATGCTGATGGGAGCGTTCCCTTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTCGAAATTATGAAGAAGGGGTGTGGAAAATCTTTTGCTCCTTTCCCCACAGGTTGCTTCTTCACAACCTCGGGTGGGTTGAGAAGTTTTGAGCATCCTCTTAATGAGGTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCGATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGTATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTACAGACTACTGA MLAVFDKSVAKSPEALRSPASDSVWALKDGILARHFSSVYPGSVIVNLGSAGLLAYSVEKQNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVSIVIEAYRTLRDRGPYPVDQVVRDIQGKFVFVLYDSSSKTAFLASDADGSVPFHWGTDSEGQLVLSDDVEIMKKGCGKSFAPFPTGCFFTTSGGLRSFEHPLNEVKPVPRVDSSGHVCGADFKVDEEARKESSGMPRVGSAANWSTDY Homology
BLAST of Cp4.1LG03g10520 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28 Identity = 60/148 (40.54%), Postives = 92/148 (62.16%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy Swiss-Prot
Match: P22106 (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) OX=83333 GN=asnB PE=1 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09 Identity = 50/190 (26.32%), Postives = 87/190 (45.79%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy Swiss-Prot
Match: Q10MX3 (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0291500 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07 Identity = 40/141 (28.37%), Postives = 69/141 (48.94%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy Swiss-Prot
Match: Q43011 (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0265000 PE=2 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05 Identity = 34/126 (26.98%), Postives = 59/126 (46.83%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy Swiss-Prot
Match: Q54MB4 (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Dictyostelium discoideum OX=44689 GN=asns PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05 Identity = 24/73 (32.88%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. NCBI nr
Match: XP_023527184.1 (stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510 bits (1313), Expect = 2.12e-182 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. NCBI nr
Match: XP_022956275.1 (stem-specific protein TSJT1-like [Cucurbita moschata] >KAG6582334.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018743.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 507 bits (1305), Expect = 3.52e-181 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. NCBI nr
Match: XP_022980155.1 (stem-specific protein TSJT1-like [Cucurbita maxima]) HSP 1 Score: 502 bits (1293), Expect = 2.38e-179 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. NCBI nr
Match: XP_038878034.1 (stem-specific protein TSJT1 [Benincasa hispida]) HSP 1 Score: 481 bits (1239), Expect = 4.07e-171 Identity = 234/250 (93.60%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. NCBI nr
Match: XP_008438612.1 (PREDICTED: stem-specific protein TSJT1 [Cucumis melo] >KAA0049327.1 stem-specific protein TSJT1 [Cucumis melo var. makuwa] >TYK17231.1 stem-specific protein TSJT1 [Cucumis melo var. makuwa]) HSP 1 Score: 478 bits (1229), Expect = 1.36e-169 Identity = 231/250 (92.40%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy TrEMBL
Match: A0A6J1GXD5 (stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111458026 PE=4 SV=1) HSP 1 Score: 507 bits (1305), Expect = 1.70e-181 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy TrEMBL
Match: A0A6J1IVF3 (stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111479629 PE=4 SV=1) HSP 1 Score: 502 bits (1293), Expect = 1.15e-179 Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy TrEMBL
Match: A0A5D3CZ34 (Stem-specific protein TSJT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00820 PE=4 SV=1) HSP 1 Score: 478 bits (1229), Expect = 6.59e-170 Identity = 231/250 (92.40%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy TrEMBL
Match: A0A1S3AXH1 (stem-specific protein TSJT1 OS=Cucumis melo OX=3656 GN=LOC103483669 PE=4 SV=1) HSP 1 Score: 478 bits (1229), Expect = 6.59e-170 Identity = 231/250 (92.40%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. ExPASy TrEMBL
Match: A0A0A0L7D3 (DUF3700 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G145760 PE=4 SV=1) HSP 1 Score: 477 bits (1227), Expect = 1.33e-169 Identity = 229/250 (91.60%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 382.5 bits (981), Expect = 2.6e-106 Identity = 182/247 (73.68%), Postives = 207/247 (83.81%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 370.5 bits (950), Expect = 1.0e-102 Identity = 175/248 (70.56%), Postives = 206/248 (83.06%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. TAIR 10
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66 Identity = 128/252 (50.79%), Postives = 167/252 (66.27%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 236.9 bits (603), Expect = 1.8e-62 Identity = 117/251 (46.61%), Postives = 162/251 (64.54%), Query Frame = 0
BLAST of Cp4.1LG03g10520 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56 Identity = 107/229 (46.72%), Postives = 146/229 (63.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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