Cp4.1LG03g10310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g10310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	armadillo repeat-containing protein LFR-like
Location	Cp4.1LG03: 11715918 .. 11719431 (+)
RNA-Seq Expression	Cp4.1LG03g10310
Synteny	Cp4.1LG03g10310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCATCATTTTGGGCCGACTACAAAAGCATGTTGAGAAATGGGCTTATGAATTGGGCCTATATTTCTCGGACCTTACCAGTTTATTTCATTTGATTTGGTGGGTGAATTCACTCGCCAATTTAGTGCGCCCTAATTCGATTTCCAGCTCCCGATTCTCACAGGGTCGGACCGGATCGCTATCGCTGAATCACACCAAATTCACAGAGATCGGTATAGGCCATGCAGAAGAGAGAGCAGAACAAGTTGGGTGGCAATGTTGGTAGCGCATCTGCTCCTCCGGCTAAGCGAGGCCGTCCATTCGGCAGTGTAAACAGCAACGCTGCTGCTGCAGCCGCTGCGGCGGAGACCTTGGCTCCATCGGCACTTCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGGTCAGTTAATTGAAACCCCTTTCGTTTTCTCTTTTAGTTTCCTACTGGAAAATCAGCTCAAAGTTCATTAATTCTTCGAGTTTGTTGTCTAAGTTGAGATGTTTCTTTGATTAAGTCCCGTTTTTATCCTCAAATTTAATTGCTGGAGCAGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACATGGGCACTTAACACTCTCACTCTTCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCCACTCCTCTGGCTAAAATTCCAGGCTTGCTCGATGCTCTTCTTCAAGTTGTATGTATTACATAACCTCTCAGTCATCTTCTCGCGCTTTCTTTTGTGATGAATAAATATGATGTCTAGCTTCCTATGGGGAATTTCATTGTCCTTCCGTATTCCATTTTTATCATGGATAGAAATTTGAAAGTGGCAAAATTAAAACTGCGAGTTCAAATAAATATCGTGATAAAGGGTATTATGATGTTATGTTACATCTTCCAGATTGATGATTGGCGTGATATAGCACTTCCAAAGGATCATGTAAAGAAGCAAAGGGTCAGAACATTAGGTGCTAATTCTTATATAACGGGATTTGGGAATGAATTTGAGGCTCTGGGCTCAAATGGGTATGCATAAAAGGATTGTTTGCCATCATTTCTTTATGGTTGCCCGGTTTACTGAATATTTATTCTAAAATAACTAATGCCTGGCAGCCTGAGACCTGGTTCTTCAGCTTCAGAGGCAACGGGTCATGCTCCCAAACCATCTCCTCGACATTGGTGGCTCGATGAAGATGGTCTATTTAATCGGGATGATGAAGGACGAGCAGAAAGACAGCAATGTGCTGTTTCCGCTTCAAATATCCTCCGAAATTTTTCTTTCATGCCAGAGAATGAATCCATTATGGCTCAACATCGACATACTCTGGAAACAGTGTTTCAATGTGTAGAAGATCATATTACAGGTGGGAAGTTCATGACCCTAATGACCAGTGCTTTTAGAATTTGATGGCATGACCCTCTCTAATGGAATAACTGATTTAAAGCGTTTCTTGTGTAGTAGTTGAAGTTTAAAGTGCTGAATATGTGTATGTTTGTCTGAATTACATCTGAAGGCTTTAATTGTTGACAGAGGATGAAGAGCTTGTCACAAATGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGTATCTTTAGCTCATCAAAGCCGTCCTACATCAAAATAACGTTAGACTTCGATCTACGACTGATCTTTTAGGCTCACCTGAATGATGATTTCTTGCTAACAAGTTTGCTTCATACTTTTCTACAGAGAAAAACGTGCAGTTGAAGCTATCATGGGAATGCTGGGATCTGCAGTCAAAGTTTGGCACTGTGCTGCTGCAGAATTACTTGGACGATTGATAATAAATCCCGATAATGAGCCGTTCCTTCTCCCCTTCGCCCCCCAGGTTTGTTTCTGATAAACCTATTATGTAGCTCCCTGTCTTCTGTTGTGTTATGCATGATAGACCGTAAAATGTTTTTGTTGAATTTTATTAGATTCACAAGCGCTTAGTTGACCTTATGAGCATCCCAGCTTTGGACGCACAAGCAGCAGCTGTTGGTGCTCTGTATAACCTTGTCGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGTAATTATTTTCCTTGGCCTTTCTAGAGATAACCATTTGAGCTGCATTAGATACTGAAACATTTTTCTGTTTTTCCCTCGAAGGGCAATCGATCGACTTCTTAAAGTTATCAAGACCCCTCATCCAGTTCCAGAAATATGCAGGAAAGCAGCAATGATATTGGAGAGTCTTGTATCTGAGCCACAGAACAGGGGTTTGCTCCTAGCATATGAAAACGCATTTGCAGAAATACTATTCTCAGATGGAAGATATTCAGATACATTCGCTAGGATATTGTATGAACTAACATCCAGACCAAACAATAAAGTTGCTGCTGCACAAGGTGTATGGGGCATGTGATCACAAGTATCATTCATTCGCTCGGGATTACTCAACTAGTACTCGTAATCGATCAAGCTAAGGACACACGACCACATCGTTGCTGCATGTAAATATATCAGCATATTGGCTTATCAGCGATTAAAAGTCGACTAATTTTCGATCATCGAAGTCTGTATTTCTCAGTCTGTACTGCTTATGTAGAACAACTAATGGCATCCAATATGAACAATGGGTATTTGAGAAGGTTACAAGAAAAGACACAAAGTCATCCGGAAATAAAATACATTAAATTTAAAATTTAAAAGAAAAGAAAAGAATTTGTTCTTGTTTTTCAAGCTTTATGGATGTGGGCCACTCTGGGCACCTCCACTGGGAACTCGTGAATCTCATCCATCCAAGGGTTCTTCTCCTTGGAGGGATCGACGGTCCTCAACGCCCGCCAAACCGCGCTGTTGCACTTGAAACCCGACCCGAATGCGATCTGCCACGTCCGATCCCCTTTCCGGATCCTCCCCTTCGCTTCACAGTAAGCCAACTCGTACCACAGCGAACTGCTCGAAGTGTTCCCGAATCTATTCAGCGTCATTCTCGACGGCTCCATATGCCACTCGCTCAAATCCAGATTCTTCTCCAGTTCATCCAGCACCGCCCGCCCTCCGGCGTGGATGCAGAAATGCTCGAACGCCAGCTTGAAATCCGGGATGTACGGCTTGATTTTCATTTTAAAGATCTTTTTCGCCACCAGCGTTGCGAAGAACAGGAGCTGCTCTGACATTGGAAGCACCAAAGGACCGAGAGTGGTGATGTTCGTCTTTAGGGCTTCGCCAGCCACAGCCATTAGGTCTTTCGACAGGCGGACACCGACGCGGCCGGTGTCATCTTCTTGCTGGAAAACGCAATTGTAGCATTTGTCGTCAGAGCCCTTGTGCGTTCGTACGGTGTGAATGAGTTGGTACTTTGAACGGCGGCGGTCGGCAGGGCGGTTAGAGAGCAAGATGGCGGCGCCGCCCATCCGGAAGAGGCAATTTGATACCAGCATGGATCGATCGTTGCCGAAGTACCAATTTAGCGTGATGTTCT

mRNA sequence

TTCTCATCATTTTGGGCCGACTACAAAAGCATGTTGAGAAATGGGCTTATGAATTGGGCCTATATTTCTCGGACCTTACCAGTTTATTTCATTTGATTTGGTGGGTGAATTCACTCGCCAATTTAGTGCGCCCTAATTCGATTTCCAGCTCCCGATTCTCACAGGGTCGGACCGGATCGCTATCGCTGAATCACACCAAATTCACAGAGATCGGTATAGGCCATGCAGAAGAGAGAGCAGAACAAGTTGGGTGGCAATGTTGGTAGCGCATCTGCTCCTCCGGCTAAGCGAGGCCGTCCATTCGGCAGTGTAAACAGCAACGCTGCTGCTGCAGCCGCTGCGGCGGAGACCTTGGCTCCATCGGCACTTCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACATGGGCACTTAACACTCTCACTCTTCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCCACTCCTCTGGCTAAAATTCCAGGCTTGCTCGATGCTCTTCTTCAAGTTATTGATGATTGGCGTGATATAGCACTTCCAAAGGATCATGTAAAGAAGCAAAGGGTCAGAACATTAGGTGCTAATTCTTATATAACGGGATTTGGGAATGAATTTGAGGCTCTGGGCTCAAATGGCCTGAGACCTGGTTCTTCAGCTTCAGAGGCAACGGGTCATGCTCCCAAACCATCTCCTCGACATTGGTGGCTCGATGAAGATGGTCTATTTAATCGGGATGATGAAGGACGAGCAGAAAGACAGCAATGTGCTGTTTCCGCTTCAAATATCCTCCGAAATTTTTCTTTCATGCCAGAGAATGAATCCATTATGGCTCAACATCGACATACTCTGGAAACAGTGTTTCAATGTGTAGAAGATCATATTACAGAGGATGAAGAGCTTGTCACAAATGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGTATCTTTAGCTCATCAAAGCCGTCCTACATCAAAATAACAGAAAAACGTGCAGTTGAAGCTATCATGGGAATGCTGGGATCTGCAGTCAAAGTTTGGCACTGTGCTGCTGCAGAATTACTTGGACGATTGATAATAAATCCCGATAATGAGCCGTTCCTTCTCCCCTTCGCCCCCCAGATTCACAAGCGCTTAGTTGACCTTATGAGCATCCCAGCTTTGGACGCACAAGCAGCAGCTGTTGGTGCTCTGTATAACCTTGTCGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGGCAATCGATCGACTTCTTAAAGTTATCAAGACCCCTCATCCAGTTCCAGAAATATGCAGGAAAGCAGCAATGATATTGGAGAGTCTTGTATCTGAGCCACAGAACAGGGGTTTGCTCCTAGCATATGAAAACGCATTTGCAGAAATACTATTCTCAGATGGAAGATATTCAGATACATTCGCTAGGATATTGTATGAACTAACATCCAGACCAAACAATAAAGTTGCTGCTGCACAAGGTGTATGGGGCATGTGATCACAAGTATCATTCATTCGCTCGGGATTACTCAACTAGTACTCGTAATCGATCAAGCTAAGGACACACGACCACATCGTTGCTGCATGTAAATATATCAGCATATTGGCTTATCAGCGATTAAAAGTCGACTAATTTTCGATCATCGAAGTCTGTATTTCTCAGTCTGTACTGCTTATGTAGAACAACTAATGGCATCCAATATGAACAATGGGTATTTGAGAAGGTTACAAGAAAAGACACAAAGTCATCCGGAAATAAAATACATTAAATTTAAAATTTAAAAGAAAAGAAAAGAATTTGTTCTTGTTTTTCAAGCTTTATGGATGTGGGCCACTCTGGGCACCTCCACTGGGAACTCGTGAATCTCATCCATCCAAGGGTTCTTCTCCTTGGAGGGATCGACGGTCCTCAACGCCCGCCAAACCGCGCTGTTGCACTTGAAACCCGACCCGAATGCGATCTGCCACGTCCGATCCCCTTTCCGGATCCTCCCCTTCGCTTCACAGTAAGCCAACTCGTACCACAGCGAACTGCTCGAAGTGTTCCCGAATCTATTCAGCGTCATTCTCGACGGCTCCATATGCCACTCGCTCAAATCCAGATTCTTCTCCAGTTCATCCAGCACCGCCCGCCCTCCGGCGTGGATGCAGAAATGCTCGAACGCCAGCTTGAAATCCGGGATGTACGGCTTGATTTTCATTTTAAAGATCTTTTTCGCCACCAGCGTTGCGAAGAACAGGAGCTGCTCTGACATTGGAAGCACCAAAGGACCGAGAGTGGTGATGTTCGTCTTTAGGGCTTCGCCAGCCACAGCCATTAGGTCTTTCGACAGGCGGACACCGACGCGGCCGGTGTCATCTTCTTGCTGGAAAACGCAATTGTAGCATTTGTCGTCAGAGCCCTTGTGCGTTCGTACGGTGTGAATGAGTTGGTACTTTGAACGGCGGCGGTCGGCAGGGCGGTTAGAGAGCAAGATGGCGGCGCCGCCCATCCGGAAGAGGCAATTTGATACCAGCATGGATCGATCGTTGCCGAAGTACCAATTTAGCGTGATGTTCT

Coding sequence (CDS)

ATGCAGAAGAGAGAGCAGAACAAGTTGGGTGGCAATGTTGGTAGCGCATCTGCTCCTCCGGCTAAGCGAGGCCGTCCATTCGGCAGTGTAAACAGCAACGCTGCTGCTGCAGCCGCTGCGGCGGAGACCTTGGCTCCATCGGCACTTCTTGGCCCTTCTCTTCATATTCATACTTCCTTCGCGGATCAAAACAATAAAAGGATAGTGTTGGCTCTACAGAGTGGATTGAAGAGTGAATTGACATGGGCACTTAACACTCTCACTCTTCTCTCCTTCAAAGAGAAGGATGATATGCGTAGAGACTCCACTCCTCTGGCTAAAATTCCAGGCTTGCTCGATGCTCTTCTTCAAGTTATTGATGATTGGCGTGATATAGCACTTCCAAAGGATCATGTAAAGAAGCAAAGGGTCAGAACATTAGGTGCTAATTCTTATATAACGGGATTTGGGAATGAATTTGAGGCTCTGGGCTCAAATGGCCTGAGACCTGGTTCTTCAGCTTCAGAGGCAACGGGTCATGCTCCCAAACCATCTCCTCGACATTGGTGGCTCGATGAAGATGGTCTATTTAATCGGGATGATGAAGGACGAGCAGAAAGACAGCAATGTGCTGTTTCCGCTTCAAATATCCTCCGAAATTTTTCTTTCATGCCAGAGAATGAATCCATTATGGCTCAACATCGACATACTCTGGAAACAGTGTTTCAATGTGTAGAAGATCATATTACAGAGGATGAAGAGCTTGTCACAAATGCACTAGAGACAATTGTGAATTTAGCCCCGCTCCTTGATCTTCGTATCTTTAGCTCATCAAAGCCGTCCTACATCAAAATAACAGAAAAACGTGCAGTTGAAGCTATCATGGGAATGCTGGGATCTGCAGTCAAAGTTTGGCACTGTGCTGCTGCAGAATTACTTGGACGATTGATAATAAATCCCGATAATGAGCCGTTCCTTCTCCCCTTCGCCCCCCAGATTCACAAGCGCTTAGTTGACCTTATGAGCATCCCAGCTTTGGACGCACAAGCAGCAGCTGTTGGTGCTCTGTATAACCTTGTCGAAGTTAATATGGACTGCAGAATAAAGCTGGCAAGCGAACGATGGGCAATCGATCGACTTCTTAAAGTTATCAAGACCCCTCATCCAGTTCCAGAAATATGCAGGAAAGCAGCAATGATATTGGAGAGTCTTGTATCTGAGCCACAGAACAGGGGTTTGCTCCTAGCATATGAAAACGCATTTGCAGAAATACTATTCTCAGATGGAAGATATTCAGATACATTCGCTAGGATATTGTATGAACTAACATCCAGACCAAACAATAAAGTTGCTGCTGCACAAGGTGTATGGGGCATGTGA

Protein sequence

MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM

Homology

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BLAST of Cp4.1LG03g10310 vs. ExPASy Swiss-Prot
Match: Q9LS90 (Armadillo repeat-containing protein LFR OS=Arabidopsis thaliana OX=3702 GN=LFR PE=1 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.2e-194
Identity = 341/460 (74.13%), Postives = 399/460 (86.74%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSN---AAAAAAAAETLAPSALLGPSLHIH 60
           MQKRE  K GGN G +S PPAKRGRPFGS ++N   AAAAAAAA+ ++PSALLGPSL +H
Sbjct: 1   MQKRELGKSGGNSGGSSGPPAKRGRPFGSTSANSAAAAAAAAAADAMSPSALLGPSLLVH 60

Query: 61  TSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQ 120
            SF +QNN+RIVLALQSGLKSE+TWALNTLTLLSFKEK+D+RRD  PLAKI GLLDALL 
Sbjct: 61  NSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPLAKIAGLLDALLL 120

Query: 121 VIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGS---NGLRPGSSASEATG-- 180
           +IDDWRDIALPKD  +  RVRTLG N+ +TGFGNE++AL S    G   GSSA+EA G  
Sbjct: 121 IIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQPPGSGIGSSAAEALGKK 180

Query: 181 HAPKPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLE 240
              K     WW++EDGLFN DDEGR+E+Q CA++ASN++RNFSFMP+NE +MAQHRH LE
Sbjct: 181 STGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSFMPDNEVVMAQHRHCLE 240

Query: 241 TVFQCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLG 300
           TVFQC+ DH+TEDEELVTN+LETIVNLA L+DLRIFSS K SYI I EK+AV+A++G+L 
Sbjct: 241 TVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYININEKKAVQAVVGILN 300

Query: 301 SAVKVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNL 360
           S+VK W+CAAAELLGRLIINPDNEPF+ P  PQIHKRL+DL+SI A+DAQAAAVGALYNL
Sbjct: 301 SSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLSIQAVDAQAAAVGALYNL 360

Query: 361 VEVNMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYEN 420
           VEVNMDCR+KLASERWA+DRLLKVIKTPHPVPE+CRKAAMILE+LVSEPQNRGLLLAYEN
Sbjct: 361 VEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILENLVSEPQNRGLLLAYEN 420

Query: 421 AFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 453
           AFAE+LF +G+YSD+FARILYELT+R N++VA+A+G+WGM
Sbjct: 421 AFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWGM 460

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BLAST of Cp4.1LG03g10310 vs. ExPASy Swiss-Prot
Match: Q6YTW6 (Armadillo repeat-containing protein LFR OS=Oryza sativa subsp. japonica OX=39947 GN=LFR PE=1 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 4.8e-180
Identity = 318/448 (70.98%), Postives = 377/448 (84.15%), Query Frame = 0


Query: 10  GGNVGSASAPPAKRGRPFGSVNSNAAAAAAAA----ETLAPSALLGPSLHIHTSFADQNN 69
           G + G   + PAKRGRPFGS   + AAAAAAA    +  AP+AL+GPSL + T+ +DQNN
Sbjct: 10  GKSGGGGGSTPAKRGRPFGSTTGSGAAAAAAAAAIGDAAAPAALVGPSLQVLTALSDQNN 69

Query: 70  KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVIDDWRDI 129
           KRIVLALQSGLKSE+ WALN LT+LSFKEKDD+RRD+TPLAK+PGLLDALLQVIDDWRDI
Sbjct: 70  KRIVLALQSGLKSEILWALNALTVLSFKEKDDLRRDTTPLAKVPGLLDALLQVIDDWRDI 129

Query: 130 ALPKDHVKKQRVRTLGANSYITGFGNE-FEALGSNGLRPGSSASE-ATGHAPKPSPRHWW 189
           A+PKDH K  RVRTLG N+ ++GFG+E  E + S+   P    ++ A     K     + 
Sbjct: 130 AMPKDHTKPPRVRTLGVNTTLSGFGHENVEKVYSDTTTPSDDQTKTADSTVTKKRSAGFL 189

Query: 190 LDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVEDHIT 249
            DE+GLFN DDEGR E+QQCAV+ASNI+RNFSFMPENE++M QHRH LETVFQC+ED  T
Sbjct: 190 FDEEGLFNVDDEGRTEKQQCAVAASNIIRNFSFMPENETVMVQHRHCLETVFQCLEDQNT 249

Query: 250 EDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAA 309
           ED+EL+TN LET+VNLAP+LDLRIFSSSKPS+IKITEKRAV+AIMGML S+++VWHCAAA
Sbjct: 250 EDDELITNMLETLVNLAPVLDLRIFSSSKPSFIKITEKRAVQAIMGMLASSIRVWHCAAA 309

Query: 310 ELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKL 369
           EL+GRLIINPDNEPFLLP  PQI+KRLVDL+S+PA+DAQAAA+ ALYN+ EVNMD R+KL
Sbjct: 310 ELIGRLIINPDNEPFLLPAIPQIYKRLVDLLSVPAVDAQAAAISALYNVAEVNMDFRLKL 369

Query: 370 ASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFSDGR 429
           ASERWA+DRLLKV+KTPHPVPE+CRKA+MI+ESLVSEPQNR  LL +EN FAEIL S+G+
Sbjct: 370 ASERWAVDRLLKVVKTPHPVPEVCRKASMIVESLVSEPQNRMHLLVHENTFAEILTSEGK 429

Query: 430 YSDTFARILYELTSRPNNKVAAAQGVWG 452
           YSDTFARILYELT+RP+NKV A Q +WG
Sbjct: 430 YSDTFARILYELTARPSNKVTAGQAIWG 457

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BLAST of Cp4.1LG03g10310 vs. ExPASy Swiss-Prot
Match: E9Q7E2 (AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-06
Identity = 89/353 (25.21%), Postives = 141/353 (39.94%), Query Frame = 0


Query: 47  SALLGPSLHIHTSFADQNN-KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPL 106
           S  L  S  +   F   N+  ++VL+L SGL +E+ +A+N  TLLS + K  M+ +  P 
Sbjct: 139 SDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP- 198

Query: 107 AKIPGLLDALLQVIDD------------WRD------IALPKDHVKKQRVRTLGANSYIT 166
            KI  LL A   V DD            WR+      +   KD V    VR L     I+
Sbjct: 199 -KIITLLLANAGVFDDTLGSFSSVFGEEWREKTDRDFVKFWKDIVDDNEVRDL-----IS 258

Query: 167 GFGNEFEALGSNGLRPGSSASEATGHAPKPSPRHWWLDEDGLFNRDDEGRAERQQCAVSA 226
                 E        PG    E+  H P+            L   D EG     Q  +  
Sbjct: 259 DRNKAHED------TPGEWIWESLFHPPRK-----------LGINDIEG-----QRVLQI 318

Query: 227 SNILRNFSFMPENESIMAQHRHTLETVFQCVEDHITEDEELVTNALETIVNLAP--LLDL 286
           + ILRN SF   N  ++A +R  L  +      H     +L    L+T+ N+A   LLD 
Sbjct: 319 AVILRNLSFEESNVKLLAANRTCLRFLLLSAHSHFISLRQL---GLDTLGNIAAELLLDP 378

Query: 287 RIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFAPQ 346
             F ++   +  +T+          L S  +       E+LG L    DN   +  +  Q
Sbjct: 379 VDFRTTHLMFHTVTK---------CLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQ 438

Query: 347 -IHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVI 378
             ++ ++  +++P +    + +  LY L E+      K+A    +ID L+ ++
Sbjct: 439 DSYREIICHLTLPDVLLVTSTLEVLYMLTEMGDVACTKIAKVEKSIDVLVCLV 450

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-05
Identity = 86/353 (24.36%), Postives = 141/353 (39.94%), Query Frame = 0


Query: 47  SALLGPSLHIHTSFADQNN-KRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPL 106
           S  L  S  +   F   N+  ++VL+L SGL +E+ +A+N  TLLS + K  M+ +  P 
Sbjct: 139 SDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP- 198

Query: 107 AKIPGLLDALLQVIDD------------WRD------IALPKDHVKKQRVRTLGANSYIT 166
            KI  LL A   V DD            W++      +   KD V    VR L ++   +
Sbjct: 199 -KIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDIVDDNEVRDLISDRNKS 258

Query: 167 GFGNEFEALGSNGLRPGSSASEATGHAPKPSPRHWWLDEDGLFNRDDEGRAERQQCAVSA 226
             G             G    E+  H P+            L   D EG     Q  +  
Sbjct: 259 HEGTS-----------GEWIWESLFHPPRK-----------LGINDIEG-----QRVLQI 318

Query: 227 SNILRNFSFMPENESIMAQHRHTLETVFQCVEDHITEDEELVTNALETIVNLAP--LLDL 286
           + ILRN SF   N  ++A +R  L  +      H     +L    L+T+ N+A   LLD 
Sbjct: 319 AVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQL---GLDTLGNIAAELLLDP 378

Query: 287 RIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHCAAAELLGRLIINPDNEPFLLPFAPQ 346
             F ++   +  +T+          L S  +       E+LG L    DN   +  +  Q
Sbjct: 379 VDFKTTHLMFHTVTK---------CLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQ 438

Query: 347 -IHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCRIKLASERWAIDRLLKVI 378
             ++ ++  +++P +    + +  LY L E+      K+A    +ID L+ ++
Sbjct: 439 DSYREIICHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLV 450

[Close]

BLAST of Cp4.1LG03g10310 vs. NCBI nr
Match: XP_023527171.1 (armadillo repeat-containing protein LFR-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 890 bits (2301), Expect = 0.0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR
Sbjct: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. NCBI nr
Match: XP_022924723.1 (armadillo repeat-containing protein LFR-like [Cucurbita moschata] >KAG7018755.1 Armadillo repeat-containing protein LFR [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 889 bits (2297), Expect = 0.0
Identity = 450/452 (99.56%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRD+ALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGH+PKPSPR
Sbjct: 121 DWRDVALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHSPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. NCBI nr
Match: KAG6582343.1 (Armadillo repeat-containing protein LFR, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 888 bits (2294), Expect = 0.0
Identity = 449/452 (99.34%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRD+ALPKDH+KKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGH+PKPSPR
Sbjct: 121 DWRDVALPKDHLKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHSPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. NCBI nr
Match: XP_022979388.1 (armadillo repeat-containing protein LFR-like [Cucurbita maxima])

HSP 1 Score: 882 bits (2280), Expect = 0.0
Identity = 448/452 (99.12%), Postives = 451/452 (99.78%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAA+ETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAASETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRDIALP+D VKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSAS+ATGHAPKPSPR
Sbjct: 121 DWRDIALPRDLVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASKATGHAPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. NCBI nr
Match: XP_038899743.1 (armadillo repeat-containing protein LFR [Benincasa hispida])

HSP 1 Score: 844 bits (2181), Expect = 8.50e-308
Identity = 432/457 (94.53%), Postives = 440/457 (96.28%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSA-SAPPAKRGRPFGSVNSNAAAAAAA----AETLAPSALLGPSLH 60
           MQKR+QNKL GNVG   SAPPAKRGRPFGSVNSNAAAAAAA    AETLAPSALLGPS H
Sbjct: 1   MQKRDQNKLAGNVGGGTSAPPAKRGRPFGSVNSNAAAAAAAVAAAAETLAPSALLGPSFH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAP 180
           LQVIDDWRDIALP+D VKKQRVRTLG+NS +TGFGNEFEALGSNGLRPGSSASE+TGHA 
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGSNSSVTGFGNEFEALGSNGLRPGSSASESTGHAS 180

Query: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240
           KPSPRHWWLDEDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF
Sbjct: 181 KPSPRHWWLDEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240

Query: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH TEDEELVTNALETIVNLAPLLDLRIFSSSKP+YIKITEKRAV+AIMGMLGSAV
Sbjct: 241 QCIEDHCTEDEELVTNALETIVNLAPLLDLRIFSSSKPTYIKITEKRAVQAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDA AAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDASAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL
Match: A0A6J1EDA6 (armadillo repeat-containing protein LFR-like OS=Cucurbita moschata OX=3662 GN=LOC111432138 PE=4 SV=1)

HSP 1 Score: 889 bits (2297), Expect = 0.0
Identity = 450/452 (99.56%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRD+ALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGH+PKPSPR
Sbjct: 121 DWRDVALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHSPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL
Match: A0A6J1IW20 (armadillo repeat-containing protein LFR-like OS=Cucurbita maxima OX=3661 GN=LOC111479129 PE=4 SV=1)

HSP 1 Score: 882 bits (2280), Expect = 0.0
Identity = 448/452 (99.12%), Postives = 451/452 (99.78%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAA+ETLAPSALLGPSLHIHTSF
Sbjct: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAASETLAPSALLGPSLHIHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRDIALP+D VKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSAS+ATGHAPKPSPR
Sbjct: 121 DWRDIALPRDLVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASKATGHAPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED
Sbjct: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC
Sbjct: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL
Match: A0A5D3D0A8 (Armadillo repeat-containing protein LFR OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00930 PE=4 SV=1)

HSP 1 Score: 843 bits (2177), Expect = 1.68e-307
Identity = 432/457 (94.53%), Postives = 440/457 (96.28%), Query Frame = 0


Query: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAAA----ETLAPSALLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA     ETLAPS LLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAP 180
           LQVIDDWRDIALP+D VKKQRVRTLGANS +TGFGNEFEALGS+GLRPGSSASE+TGHA 
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPGSSASESTGHAS 180

Query: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240
           KPS RHWWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSSRHWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL
Match: A0A1S3AWW3 (armadillo repeat-containing protein LFR OS=Cucumis melo OX=3656 GN=LOC103483658 PE=4 SV=1)

HSP 1 Score: 843 bits (2177), Expect = 1.68e-307
Identity = 432/457 (94.53%), Postives = 440/457 (96.28%), Query Frame = 0


Query: 1   MQKREQNKLGGNV-GSASAPPAKRGRPFGSVNSNAAAAAAAA----ETLAPSALLGPSLH 60
           MQKR+QNKLGGNV G ASAPPAKRGRPFGSVNSNAAA AAA     ETLAPS LLGPSLH
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120
           IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 121 LQVIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAP 180
           LQVIDDWRDIALP+D VKKQRVRTLGANS +TGFGNEFEALGS+GLRPGSSASE+TGHA 
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSVTGFGNEFEALGSDGLRPGSSASESTGHAS 180

Query: 181 KPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVF 240
           KPS RHWWL+EDGLFN DDEGRAERQQCAVSASNILRNFSFMPENESIMA HRHTLETVF
Sbjct: 181 KPSSRHWWLEEDGLFNLDDEGRAERQQCAVSASNILRNFSFMPENESIMALHRHTLETVF 240

Query: 241 QCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300
           QC+EDH+TEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV
Sbjct: 241 QCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAV 300

Query: 301 KVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360
           KVWHCAAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEV
Sbjct: 301 KVWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEV 360

Query: 361 NMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420
           NMDCRIKLASERWAIDRLLKVIK PHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA
Sbjct: 361 NMDCRIKLASERWAIDRLLKVIKMPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFA 420

Query: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 EILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 457

[Close]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL
Match: A0A6J1CBV6 (armadillo repeat-containing protein LFR isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009270 PE=4 SV=1)

HSP 1 Score: 833 bits (2152), Expect = 8.61e-304
Identity = 423/452 (93.58%), Postives = 432/452 (95.58%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSNAAAAAAAAETLAPSALLGPSLHIHTSF 60
           MQKREQ+KLGGNVG  SAPPAKRGRPFGS +SNAAAAAAA ETLAPSA LGPSLH+HTSF
Sbjct: 1   MQKREQSKLGGNVGGGSAPPAKRGRPFGSSSSNAAAAAAA-ETLAPSAHLGPSLHVHTSF 60

Query: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQVID 120
           ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMR+DSTPLAKIPGLLDALLQVID
Sbjct: 61  ADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDSTPLAKIPGLLDALLQVID 120

Query: 121 DWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGSNGLRPGSSASEATGHAPKPSPR 180
           DWRDIALP+D VKK RVRTLGANS +TGFGNEFEALGSNGLRPGSS  E   HAPKPSPR
Sbjct: 121 DWRDIALPRDLVKKPRVRTLGANSSVTGFGNEFEALGSNGLRPGSSVPETMSHAPKPSPR 180

Query: 181 HWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLETVFQCVED 240
           HWWLDEDGLFN DDEGRAERQQCAVSASNI+RNFSFMPENE IMAQHRHTLETVFQC+ED
Sbjct: 181 HWWLDEDGLFNLDDEGRAERQQCAVSASNIIRNFSFMPENEVIMAQHRHTLETVFQCIED 240

Query: 241 HITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLGSAVKVWHC 300
           HITEDEELVTN LETIVNLAPLLDLRIFSSSKPSYIKITEKRA EAIMGMLGS+VKVWHC
Sbjct: 241 HITEDEELVTNTLETIVNLAPLLDLRIFSSSKPSYIKITEKRAGEAIMGMLGSSVKVWHC 300

Query: 301 AAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360
           AAAELLGRLIINPDNEPFLLPF PQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR
Sbjct: 301 AAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSIPALDAQAAAVGALYNLVEVNMDCR 360

Query: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYENAFAEILFS 420
           IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNR LLL YENAFAEILFS
Sbjct: 361 IKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRALLLVYENAFAEILFS 420

Query: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 452
           DGRYSDTFARILYELTSRPNNKVAAAQGVWGM
Sbjct: 421 DGRYSDTFARILYELTSRPNNKVAAAQGVWGM 451

[Close]

BLAST of Cp4.1LG03g10310 vs. TAIR 10
Match: AT3G22990.1 (ARM repeat superfamily protein )

HSP 1 Score: 680.6 bits (1755), Expect = 8.4e-196
Identity = 341/460 (74.13%), Postives = 399/460 (86.74%), Query Frame = 0


Query: 1   MQKREQNKLGGNVGSASAPPAKRGRPFGSVNSN---AAAAAAAAETLAPSALLGPSLHIH 60
           MQKRE  K GGN G +S PPAKRGRPFGS ++N   AAAAAAAA+ ++PSALLGPSL +H
Sbjct: 1   MQKRELGKSGGNSGGSSGPPAKRGRPFGSTSANSAAAAAAAAAADAMSPSALLGPSLLVH 60

Query: 61  TSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDALLQ 120
            SF +QNN+RIVLALQSGLKSE+TWALNTLTLLSFKEK+D+RRD  PLAKI GLLDALL 
Sbjct: 61  NSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPLAKIAGLLDALLL 120

Query: 121 VIDDWRDIALPKDHVKKQRVRTLGANSYITGFGNEFEALGS---NGLRPGSSASEATG-- 180
           +IDDWRDIALPKD  +  RVRTLG N+ +TGFGNE++AL S    G   GSSA+EA G  
Sbjct: 121 IIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQPPGSGIGSSAAEALGKK 180

Query: 181 HAPKPSPRHWWLDEDGLFNRDDEGRAERQQCAVSASNILRNFSFMPENESIMAQHRHTLE 240
              K     WW++EDGLFN DDEGR+E+Q CA++ASN++RNFSFMP+NE +MAQHRH LE
Sbjct: 181 STGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSFMPDNEVVMAQHRHCLE 240

Query: 241 TVFQCVEDHITEDEELVTNALETIVNLAPLLDLRIFSSSKPSYIKITEKRAVEAIMGMLG 300
           TVFQC+ DH+TEDEELVTN+LETIVNLA L+DLRIFSS K SYI I EK+AV+A++G+L 
Sbjct: 241 TVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYININEKKAVQAVVGILN 300

Query: 301 SAVKVWHCAAAELLGRLIINPDNEPFLLPFAPQIHKRLVDLMSIPALDAQAAAVGALYNL 360
           S+VK W+CAAAELLGRLIINPDNEPF+ P  PQIHKRL+DL+SI A+DAQAAAVGALYNL
Sbjct: 301 SSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLSIQAVDAQAAAVGALYNL 360

Query: 361 VEVNMDCRIKLASERWAIDRLLKVIKTPHPVPEICRKAAMILESLVSEPQNRGLLLAYEN 420
           VEVNMDCR+KLASERWA+DRLLKVIKTPHPVPE+CRKAAMILE+LVSEPQNRGLLLAYEN
Sbjct: 361 VEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILENLVSEPQNRGLLLAYEN 420

Query: 421 AFAEILFSDGRYSDTFARILYELTSRPNNKVAAAQGVWGM 453
           AFAE+LF +G+YSD+FARILYELT+R N++VA+A+G+WGM
Sbjct: 421 AFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWGM 460

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g10310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS90	1.2e-194	74.13	Armadillo repeat-containing protein LFR OS=Arabidopsis thaliana OX=3702 GN=LFR P...	[more]
Q6YTW6	4.8e-180	70.98	Armadillo repeat-containing protein LFR OS=Oryza sativa subsp. japonica OX=39947...	[more]
E9Q7E2	3.2e-06	25.21	AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid...	[more]
Q68CP9	1.6e-05	24.36	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of Cp4.1LG03g10310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527171.1	0.0	100.00	armadillo repeat-containing protein LFR-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924723.1	0.0	99.56	armadillo repeat-containing protein LFR-like [Cucurbita moschata] >KAG7018755.1 ...	[more]
KAG6582343.1	0.0	99.34	Armadillo repeat-containing protein LFR, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022979388.1	0.0	99.12	armadillo repeat-containing protein LFR-like [Cucurbita maxima]	[more]
XP_038899743.1	8.50e-308	94.53	armadillo repeat-containing protein LFR [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g10310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDA6	0.0	99.56	armadillo repeat-containing protein LFR-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IW20	0.0	99.12	armadillo repeat-containing protein LFR-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3D0A8	1.68e-307	94.53	Armadillo repeat-containing protein LFR OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AWW3	1.68e-307	94.53	armadillo repeat-containing protein LFR OS=Cucumis melo OX=3656 GN=LOC103483658 ...	[more]
A0A6J1CBV6	8.61e-304	93.58	armadillo repeat-containing protein LFR isoform X1 OS=Momordica charantia OX=367...	[more]

BLAST of Cp4.1LG03g10310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22990.1	8.4e-196	74.13	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 192..448 e-value: 1.3E-18 score: 68.7
IPR033388	SWI/SNF-like complex subunit BAF250, C-terminal	PFAM	PF12031	BAF250_C	coord: 204..234 e-value: 1.3E-4 score: 21.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..182
None	No IPR available	PANTHER	PTHR12656:SF13	ARMADILLO REPEAT-CONTAINING PROTEIN LFR-LIKE	coord: 1..452
IPR021906	SWI/SNF-like complex subunit BAF250/Osa	PANTHER	PTHR12656	BRG-1 ASSOCIATED FACTOR 250 BAF250	coord: 1..452
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 102..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g10310.1	Cp4.1LG03g10310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0048366	leaf development
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0035060	brahma complex
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0016514	SWI/SNF complex
molecular_function	GO:0031491	nucleosome binding