Cp4.1LG03g10060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g10060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG03: 11849115 .. 11850186 (+)
RNA-Seq Expression	Cp4.1LG03g10060
Synteny	Cp4.1LG03g10060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGATTTTCCAGGGAGTCCTGGGACTGTGATGGGGCTAATTCTGAGGATTTTGCAGTTTGTTTTTGCTGCTGTCTCGATTGCTTGTATGGCTTCGACTGCTTACTTCTTCAAATTCACAGCTTTTTGGTTTGTGTTCTTTGCTCCCTTTTTAGTTCCTCTGTTTCACTTGAATACAATCTGATGATTCTCCATGCATCTAATTAGTTCGATCTTAGTCTTATAATCAACCCATGAAACTACGGTCAACCTTGAACCATCCCCTGTGATAAAGCAAACTGGTTGTTTATTATTTGCACCACGAGCTGTTTAAAAGGCTCAAACTGTAGCAATTTCATATCATATAGATGTTTCATTGTACCTTTCCTTGCCACAAGTACTGAAAATGACTATCTTTCGACAATTTGGATGATCAAAGTTCAAGATTTGGGGTTCCTGTTGATTGCTGACAATGACCAAAAGTATCCATCTGCATAGAGCATTGAAAATCAGTCAAGAAAAATGGAGATGAAAACATGTGCAGTTCTCTAATTGGATATTCTTTTAGATTACCTATTTTCTCCCACCATAGCCTTGAGACCAGTCCATCTTGTTGCAATGTTCCAAAACACATAGGATTTCACATAAAGAATACTTCTTGTTCGATGTTCTTACCATTTATCCTTTGTGCAGCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAAAGCCCTCCAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGGGATTGGGTAAGTCTCCATTAAACTTTTTCACCGACTTTTTTATGCACAACTCTAAGTTTCATGTGTCATGTTGCAGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATCTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCCTCCAGTTAA

mRNA sequence

ATGAGGGATTTTCCAGGGAGTCCTGGGACTGTGATGGGGCTAATTCTGAGGATTTTGCAGTTTGTTTTTGCTGCTGTCTCGATTGCTTGTATGGCTTCGACTGCTTACTTCTTCAAATTCACAGCTTTTTGCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAAAGCCCTCCAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGGGATTGGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATCTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCCTCCAGTTAA

Coding sequence (CDS)

ATGAGGGATTTTCCAGGGAGTCCTGGGACTGTGATGGGGCTAATTCTGAGGATTTTGCAGTTTGTTTTTGCTGCTGTCTCGATTGCTTGTATGGCTTCGACTGCTTACTTCTTCAAATTCACAGCTTTTTGCTACCTGATAGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGCTAGCATTAATCGATGCCTATGCACTGGTAAAAAACAAAGCCCTCCAGAACTCTCTGCTCATTAGCCTCTTCGTCGTCGGGGATTGGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCTAGTGGGGTAGCAATACTGTATTTCAACGACTTGAACATCTGTGGTTTTATTGGGGAATGCCAAAAATACCAACTCTCTGTCGCCTTTGCATTCCTCAGCTGGATAACTGTTGCCACTTCTTCTCTTATCATGGTCTGGCTATTGGCCTCCAGTTAA

Protein sequence

MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVLALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGECQKYQLSVAFAFLSWITVATSSLIMVWLLASS

Homology

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46
Identity = 95/152 (62.50%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PG+PGT+ GL+LRI Q VFAA SI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A++D +ALV+ K L + +L+SLFVVGDW+T+TL+LA ASSS+G+ +LYF DL  C F  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 153
           C KYQLSVA AFL WIT+A SSL  +WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot
Match: P0DI71 (CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.6e-40
Identity = 84/151 (55.63%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M++ PG PGT+ GL LR+ QF+FAA +I  M +   F  +TAFCYL+A++ LQ  WSF+L
Sbjct: 28  MKELPGMPGTIGGLALRVGQFLFAAAAIVIMVTGDEFTNYTAFCYLVAAMSLQFLWSFML 87

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A++D YAL+  + L+NS+L+SLFVVGDW+TATL+LAAA S++GV +L+ NDLN CG +  
Sbjct: 88  AILDTYALLIKRGLRNSVLLSLFVVGDWVTATLSLAAACSTAGVTVLFDNDLNYCGQM-H 147

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
           C +YQLS A AFLSW+ +  SSL+  WL AS
Sbjct: 148 CHRYQLSAAMAFLSWLLIGMSSLLTFWLWAS 177

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 85/151 (56.29%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+D PG+PGTV GL LR+ QF+FAA S+  M ++  F  FTAFCYL A++ LQ  WSFVL
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A ID YAL+  + L NS+L+SLFVVGDW+TATL+LAAA S++G+ +L+  DLN C  +  
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCDQM-H 151

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
           C++YQLS   AF SW+ +A SSLI + LL S
Sbjct: 152 CRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-35
Identity = 81/153 (52.94%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+D  GSPGT  G+ LR+ Q VFA  S+  MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A +D Y+L   + L N +L+SLFVVGDW+TA L+ AAAS+S+GV IL+  D++ C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
             C +Y+LSV  AF++W  +ATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-35
Identity = 81/153 (52.94%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+D  GSPGT  G+ LR+ Q VFA  S+  MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A +D Y+L   + L N +L+SLFVVGDW+TA L+ AAAS+S+GV IL+  D++ C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
             C +Y+LSV  AF++W  +ATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Cp4.1LG03g10060 vs. NCBI nr
Match: XP_023526740.1 (CASP-like protein 5B3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (724), Expect = 7.70e-96
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE
Sbjct: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVAFAFLSWITVATSSLIMVWLLASS
Sbjct: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152

[Close]

BLAST of Cp4.1LG03g10060 vs. NCBI nr
Match: KAG7018786.1 (CASP-like protein 5B3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275 bits (702), Expect = 3.96e-92
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGTVMGLILRILQFVFAA SIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 25  MRDFPGSPGTVMGLILRILQFVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 84

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A+IDAYAL+KNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDL+ICGFIGE
Sbjct: 85  AIIDAYALIKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLDICGFIGE 144

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVAFAFLSWITVATSSLIMVWLLASS
Sbjct: 145 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 176

[Close]

BLAST of Cp4.1LG03g10060 vs. NCBI nr
Match: XP_022924236.1 (CASP-like protein 5B3 [Cucurbita moschata])

HSP 1 Score: 273 bits (698), Expect = 1.61e-91
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGTVMGLILRILQFVFAA S+A MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 25  MRDFPGSPGTVMGLILRILQFVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFVL 84

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDL+ICGFIGE
Sbjct: 85  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLDICGFIGE 144

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWITVATSSLIMVWLLASS
Sbjct: 145 CQKYQLSVALAFLSWITVATSSLIMVWLLASS 176

[Close]

BLAST of Cp4.1LG03g10060 vs. NCBI nr
Match: XP_022979206.1 (CASP-like protein 5B3 [Cucurbita maxima])

HSP 1 Score: 271 bits (694), Expect = 2.89e-91
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGT+ GLILRILQFVFAAVSIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MRDFPGSPGTMTGLILRILQFVFAAVSIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALVKN+AL+NSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE
Sbjct: 61  ALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 151
           CQKYQLSVAFAFLSWITVATSSLIMVWLLAS
Sbjct: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 151

[Close]

BLAST of Cp4.1LG03g10060 vs. NCBI nr
Match: XP_008438541.1 (PREDICTED: CASP-like protein 5B3 [Cucumis melo])

HSP 1 Score: 254 bits (649), Expect = 2.09e-84
Identity = 134/152 (88.16%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGT MGLILR+LQ VFAA SIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALV+NKALQ+++L+SLFVVGDWITATLTLAAASSSSGVAILYFNDL  C FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWIT+ATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL
Match: A0A6J1E906 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 7.80e-92
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGTVMGLILRILQFVFAA S+A MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 25  MRDFPGSPGTVMGLILRILQFVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFVL 84

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDL+ICGFIGE
Sbjct: 85  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLDICGFIGE 144

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWITVATSSLIMVWLLASS
Sbjct: 145 CQKYQLSVALAFLSWITVATSSLIMVWLLASS 176

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL
Match: A0A6J1IQ47 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479011 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 1.40e-91
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           MRDFPGSPGT+ GLILRILQFVFAAVSIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MRDFPGSPGTMTGLILRILQFVFAAVSIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALVKN+AL+NSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE
Sbjct: 61  ALIDAYALVKNRALKNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 151
           CQKYQLSVAFAFLSWITVATSSLIMVWLLAS
Sbjct: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 151

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL
Match: A0A1S3AXA2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.01e-84
Identity = 134/152 (88.16%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGT MGLILR+LQ VFAA SIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALV+NKALQ+++L+SLFVVGDWITATLTLAAASSSSGVAILYFNDL  C FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWIT+ATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL
Match: A0A5D3D223 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001480 PE=3 SV=1)

HSP 1 Score: 252 bits (644), Expect = 5.86e-84
Identity = 133/152 (87.50%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGT MGLILR+LQ VFAA SIA MASTAYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALV+NKALQ+++L+SLFVVGDWITATLTLAAASSSSGVAILYFNDL  C FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWI +ATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWIAIATSSLIMVWILASS 152

[Close]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL
Match: A0A0A0L4F6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1)

HSP 1 Score: 252 bits (644), Expect = 5.86e-84
Identity = 133/152 (87.50%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGTV GLILRILQ VFAA S+A MASTAYFFKFTAFCYLIASLGLQITWSF+L
Sbjct: 1   MKDFPGTPGTVTGLILRILQCVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFML 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           ALIDAYALV+NKALQ+++L+SLFVVGDWITATLTLAAASSSSGVAILYFNDL  C FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 152
           CQKYQLSVA AFLSWIT+ATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Cp4.1LG03g10060 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-47
Identity = 95/152 (62.50%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PG+PGT+ GL+LRI Q VFAA SI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A++D +ALV+ K L + +L+SLFVVGDW+T+TL+LA ASSS+G+ +LYF DL  C F  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLASS 153
           C KYQLSVA AFL WIT+A SSL  +WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Cp4.1LG03g10060 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+   G PGTV GL+LRI Q   AA SI  M S   F   TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A +D YAL   K LQN +L+SLFVVGDW+TA L+LAAA SS+GV +LY  D+  C    +
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
             C +Y+++VA +F++WI +A SS +  W+LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Cp4.1LG03g10060 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 138.3 bits (347), Expect = 5.2e-33
Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M D  G PGT++GL LR  QF+FAA ++  MAST+ F   TAFCYL+A+ GLQ  WS  L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
           A++D YA++  ++LQN  L+SLF +GD +T+TLT AAA +S+G+ +L  NDLN C     
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 148

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
           C +++ S A AF+SW     S L   W LAS
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Cp4.1LG03g10060 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+   GSPGT+ GLILR+ Q   AA SI  M S+  F  +TAFC+L+AS+GLQ+ WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGF--I 120
           A +D YA+ +   L++ +L+SLF VGDW+TA L LAAA SS+GV +L+  D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 121 GECQKYQLSVAFAFLSWITVATSSLIMVWLL 150
             C ++Q+SV  +F +W   A SS  M W+L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Cp4.1LG03g10060 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MRDFPGSPGTVMGLILRILQFVFAAVSIACMASTAYFFKFTAFCYLIASLGLQITWSFVL 60
           M+D  G PGT  GLILR+ QFV A +S++ M +T+ F   TAFC L+ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 61  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLNICGFIGE 120
            +IDAYAL+  ++L+N  ++  F +GD +T+TLT AAAS+S+G+ +L  NDL  C  +  
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCN-VNH 150

Query: 121 CQKYQLSVAFAFLSWITVATSSLIMVWLLAS 152
           C +++ + A AF+SW  V+ S ++  W LA+
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLAT 179

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g10060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	5.3e-46	62.50	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
P0DI71	9.6e-40	55.63	CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1	[more]
D5ACW4	1.1e-38	56.29	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]
B8BD96	4.2e-35	52.94	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	4.2e-35	52.94	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]

BLAST of Cp4.1LG03g10060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526740.1	7.70e-96	100.00	CASP-like protein 5B3 [Cucurbita pepo subsp. pepo]	[more]
KAG7018786.1	3.96e-92	96.71	CASP-like protein 5B3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022924236.1	1.61e-91	96.71	CASP-like protein 5B3 [Cucurbita moschata]	[more]
XP_022979206.1	2.89e-91	96.69	CASP-like protein 5B3 [Cucurbita maxima]	[more]
XP_008438541.1	2.09e-84	88.16	PREDICTED: CASP-like protein 5B3 [Cucumis melo]	[more]

BLAST of Cp4.1LG03g10060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E906	7.80e-92	96.71	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1	[more]
A0A6J1IQ47	1.40e-91	96.69	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479011 PE=3 SV=1	[more]
A0A1S3AXA2	1.01e-84	88.16	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1	[more]
A0A5D3D223	5.86e-84	87.50	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00...	[more]
A0A0A0L4F6	5.86e-84	87.50	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1	[more]

BLAST of Cp4.1LG03g10060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	3.7e-47	62.50	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.9e-35	53.59	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	5.2e-33	49.01	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	1.4e-30	47.68	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	1.1e-27	43.71	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 7..136 e-value: 3.9E-23 score: 81.9
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..150
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 1..150
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..30 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g10060.1	Cp4.1LG03g10060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane