Cp4.1LG03g09300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g09300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like
LocationCp4.1LG03: 6605886 .. 6612136 (+)
RNA-Seq ExpressionCp4.1LG03g09300
SyntenyCp4.1LG03g09300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAACTCAGGTGTAAGAATAGGAATGAGATTCGAACCCTGCGTTATAATTTCTTGACCACCGAACTGATTGCAATAAGACCGTAAAAATAACAAAAATTCCGTCGCTACTTGGCGTTGGCGTAGCCTCGATAGGCATCTGGGAAGGAGCTTCATTCATCTGAGGTAGAGCGACTTCACGAACAGCGAGAGACGGAGAAATGGCCTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGTATTCCGTTTCTCTTCTCTTTTACGCTTTACGATCCCTTCTAAAACCACATATCCTTCTCCTCCCCTAGCTTCTTTTCGGAGATTGTTGATTAATGGAGCTTTGGTTCTCACAGGGCATTTGTGGAAAAGACTTACAAAGAACTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGGGAATGCAGTGGAGTCGAGCCGCAATTGTGGGCAAGATATGGTACTTTAATCTCCTCTTCCTCCCAAATGATTTCATGTCCTTTTATTTTCTTCCCTTTAGGTTTCGAGTTTCTTTCGAGCTTTGCGGTTTTATTTTCTCCACATTCTTTTCATGAAGTCAATGATATGGCCGACTTGATTGATAAGCGCGATTAGCTATGTCAAATACTCTGCTGGGTAGTCTTTCCTTTGCATCGATTATTACTTTCGTTGTCTATTTGTGATGGAAGGTACTCTTTCCATGGTAGATAGTCAGGTCGTAGTATTTTGAATGCTCCATTACCAGGGATATAGTAATACCCATCTAATCGAATTCGTTCTGGGTTGATTTTGTCAAGCTTTGCAATTTTCTTTTACATTGTTCTGTGAACTGTGAAATTTGACTGGTCCTATGGTTTCTCAAGTAAAATAAAAACCAACTTGTCCTGATATAGAATCTGCTCCTACGCTGACATCTTCGTTTTACCTTCTAAATGAAGGAGAAATTAGTAGCCACTGGAGTTTTACTGTGTCCCATTTTCACTTAACTAGCATTCACCCTCGAAAGAAAATATATTGTTAGGATAAGCTGTTTTTACTTTTGGTTATGGTTGGTGGCTGATCTTTCAGGAGAGACGCTCATGAGTAGTAATGGTATAAACTTTTAGCTTCTTACAAATGCAAGGAGGGATTCATTTATTTGTTAACTTTTTTTTTCATTTTTTCTTTTGTCTTTGGCTTTCAAAAATTTTAATTGCATATGTTACAGATAACATTGTGGTAACATAAGACGTTTTCATATTAAGTGATGAGATTTAGTTCTTCACATCAATGTTTTCTAAACTATTCTTATCAAGATATATGATAAGGAATCATGAAACTATTCAGATTCAAGTTCTTTGACCAACATTTGTGTAGACTGCAGTGTATTTACACTAAAAAAATTTGTCAAATGATGAATAGCAGTATTATTATCCTTTTGGTGGTCATGGAACCTTAAGCATAAATTTGTCTTAAATATCATTGTAATTCCTTATTCAAGTTCATTTTGTACATTTCACTATTTTATTGATGGGATAATAAGTTATATAAGTTGTTATGTGGCCTCGGACTGCTTATGGAAAAATGTTCATTGGACATTATCCGGAACATTAATAGAATGTTGAAACTTGATATTTACATTCCAATTTTTTCTTTCCATGAAATCATTGGTCTGCAACTTTACTTTTGTATGAATCACGTTGCGTCATGATTTCTTCTTCTTCTTCTTTCTTTTTTTTTTTCTTCCATGAGAAACAAGTAACCTTCATTCCATTGATATGCAGAGAGAGAAGTAAGGCTATAGTCCCGAAAAGTGGGGAGAATTTACACCAAGTGAGAGCAATGTAAGCAAGGTGTTAGGAAAAAAAAAAAAAAAAAAAAAAAANAAGAGACGAAATATGTAGCTTTTTCCTTGAAGATGCGTCAATTTTGCTTGAGGCATGTTAACCAAAGGAGGATTTTGTTGAAACAGTCCCATATGACCTCTTGTTCCTTGCTGAAGAGATGCCCATGATGAGCATCTCTAAAAGAGTCATTGAAACCAAGCGAAAGAAATGAAAGATTATTCAAAGGTTTACAGAAATAAAAACATTAAAAAAAAAAAAAAACAGCTCCACAAGGAGTCCCAACACTAATTAAAAAATTTCTCCAATCGAAAAGAATAAAGCCTGATCGATAATTACAAAAAAGCAGAGACTAAAATCCACGAGTAGGTATTAAAATGAAAATTCTCCCAAATCTCATTTGCCGATCACTTCACACTCCTAAAAGACCTACTATTCTTCTCAAGCAAAAGCCCCTAAAACACTGTAAAAATTCACACCTGCCATAAAACTCGGCCTTTATCCTGAAAGGGAGATTCAAAGGGTCTCTTCAATCAAAGAAAAACAACCTCTGTTACAAACCCAACAAATCCCGATGATGCTCCCAAACTACCAAAGTGCACTTACAGTCAACCAAATAATGATCCAAACTTTCTTATGCTTGATGACAACAAGAGCACCATTGCAAGCCCAACACAAAAGAGGAGTGCTTCTGAACACAACCTAAGTTGTTAACTTTCTAATGAAGAACCTCCCACACAAAGAATTTGACCTTTTTGGGATTCTTTAACGTTTCAAAGAGAGGAGAAAGCCAAAGCTCTTGGAGGGGGAGAAGGGCCACATAGCAAGTGGAAAAAAAAAATGAACCAGGAGAGAAATCCCATGAAGGATTGGAGGATAAAAATCCAATACCCCTGTTCCTTCAACTCACCAAAGAGTCGCCTATTAGCAAATAGGGCCACTCCATTAAATAGCTTCCCTATTCGCCAAAGTGTGGTTGAACCCAAAGATCCAAAAGAAGAAAACAAAGGGGAATCTAGAGAGGGAGGACAAAGGCCACATAATGCAACCTTTTGTATAAATGATGGTACAAGCGAGGAAACACAAGCAAAGAGGTTTATTGTAAATAATTTTGAATAATTTTGAACCATCAACTAAAGTTGATTTCGTAGGAGTAAGATGAATTGTGTTACTGACAGTGAGAGTTATTGTACAATAACTAGTTATTTTTGTTGATAGTTGTTGTTAGTCAATTTGCTTGTTGATTAGTTGGTTGTTTATGTGCTCTAGTGTATTAAGTGGCGACTGCTGTATAACAATATAAAAGATGTGGCCCCATCACGATCTTAATTGAACAAGCTCTATTCTATAGGTCTCTATAGGCTGTGCAACTGTGCCCTCGAGTTCTTAGGAAAAGGTATTAAGTCTTTGTAATACTACCTTTATTATATAGAAAAAAAATTTCTCAAGTCTTTTTTGACATTAGCCTGGGCCAACAATTTCCACCCATAGAGTTCGAGAAAACTTGTTAATGAAAATTTTAGGAATGACTTTTTTTTTTGATAATGTACCTGGTAGCAAAATGTACAGTTAACTTCAGGAGGCTACTCAAAAAGAGATTGAAACATTCATCAATCTTGATCCACAAAACTTTAGAGATTCTCTCAGTGAATTGAATTTTCCCCGCAAGATCATAATCTTCACTGTCAAATTATCGTGAATCATTGGATTGTTCTGACGTGGTGGACTTGAAACAACTAATGTCTTATGTAATTTGCTAGAAATAAATAACATGGACTCAAGAATGAGAGTTTTCGAAGGTTATGAAATTTATATATCATACTTCGTAAAAGAAAAAGAAGTTGTGTCATTCTATGTGATTAAGATTCTTATTGGAAACTTGTTGCAAGTTAGCTTATTTCTTTTTCTTTCTTTTTTTGCTTCCAATGCTAATAGAGTGCTTTGTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTCCCCATCTCCTCACTAAGAACTACAACTATCAAAGTATGAAGCCTTATCCATTCTTTTTATCAAGATATCAAGGATGTTGTTAATGTTTGCCTTGAAAGTTCGACTCACTTGAAATGTCATAGACAACCTTGACATTGTGTTGAAGTTCATTTGCCACAGTTTGGGCAGTTATATGGAAGTAGTTAAATTTTATAGATTTTGACATCTCAAAGTGTTAAAGCGGTGAATCTAGGTACTAAAGGGAAACTGAACTTTTTAATTTCATTATTTCAAGTTTAGTTCTCGAATTTTAAAAAGTATCTAAACGGTCGTGAACTTTCAATTTTCAGTCTAAAATTTTGTATCTAATATGCCATTGACTTATTAAAAAAATTTACAATGTTACTAATATATTACATATAAATTTGACTTTTACATCTACTACAATTCTAAACTTTCAATTTAGTGTCTAGTAAGTTTGTGAATTTTTAAATCGAATAGGTGAAAGATCTATTTGACACAAAATTGAAATTTTAGGGATTTGTTGGATACAAAATTAAAAGTTTAAGGGCTTATTAGAAATTCTTTAAAGTTAAGGGACTAAATAAGCATGAACTTAAAAAATGAGAACTTGGATACTTATTAAGTTGTACTTAAGGTTGTCAAACATTTATTAAAAGTTTTTTATGATTATTTTGATGAGGAACATGATTGGGGAATATGGATAGATAATAAAGAAAAACTCTTTGAACCTGGATATCCTTGGATATGCTATTTTGATGAGGAACATGATTGGGGAATATGGATAGATAATAAAGAAAAACTCTTCGAACCTGGATATCCTTGGATATGCTAAAACTAATTGAACCATGGGGCGGGAAAGGTGAAAGTAAAACTGAAAACCATGGGGCAGCAAAGGTAAAAGTAAAACCAAAAATCATGGTTGGCGGAATAGATAGGCGATGAAAAAATCATGGTGGGGGAATTGTAGATATTGGGATTTTACCTACATTTTATCAGGAGTGTTAATGATTATCAGTAGCTCCCAAATAATAGTTTTGAGTTTCTTTTGATATCTATTTTCATCTTTCCATGCGTGTTCTTATAAGTTTTGGGTCAAGGATTCCAGAATCCTTTCTGACACTTTCAAAGAGACTTGCTGTCAAATGAACAGAGTCATAAAGCGACAACCACTTGTCTTCCACAAGCCTAAGCATGGATTTAACAAGGTTATCCAGAAGAGAAATTTATTTTTTGGACTTCCAAATCATTAAGGCTTGTTCGAAGTTTAGGTTCCAAGAAGATTTGTTGGAATTACAAACTTATTCGAAGGCATTCAAAACAACATAATTCAATAAAAAATGGCAGACAGCTATATCTGAGGGTCTTCTCTAGATCTGGTGTTTGTTCAATACGTTTCATACTAGTCTCTTTAAGAAAATACCTCTTTCATTTCGAAAGTGGCTTTCTAAGGGGCCTTTATTGGTTTTGATGGCTGCTTGAGTGGACCTCCAAACACGTTTGGAAACTCCATATTGTTTTAGCTAATTATCAATCCATTCATAAAGCTGGTGATAATGGGGATTGGAATTATCTTGATGCTGTTCTGAGAATGAAAGATTTTGGTTCAAGGTGAAGGTCATGGATTTACACTTCCACAAACAATTGTAGATATTATCATTTGTAAATCGGAAGTGGAGGACATGCTTTCTTTGCTCCTTCAACTATTTGGTTTGTTCCATATCATAGGACAATTGGTGAATGCTAATGTCATAAGATTAGATATTGTTTGTTTGAAAGATAGATCATGCACCGAAATTTAAAGGATATTTATGTTCGTGTTTGGTTAATGCAACTGATTATTTTTCCTTTTTTTCTTTTTGATTTGACAGACATGGGCATTGAAAGGGTTGCTCGTCTAGAGGGTTTGAGCGAGGCACAGATCTCGAAGGCACTTGAAGACCTAGTCAAAGTTGGGGCATCCTGAAGGAGTAATCTGCTGTGCTATTGTACTGCAACAGACGTCAATAAATGCACGAGTGGAACGTTTGTTGAGATGCTTTTGTGTTTACATTCTGTTCGCTCAGCTCTTTTGAGATTATTGCTCAAATATTCATCTTCAGAAATCATGTTTCTGGTACGTATGTCTATTTGTCTATATGGAGAGTTATTGCCATAATGGTGATAATGAGTTCCACATTTTCCTCAAACAATTGGTCACAATAATTTCATAGAATTGGATACGTTCTATTTTTAGATGGAATGGATCTAAAATGCTTATTTCTATCTGAAATTTTCATCTTCATTCAAGTATCTTTTTTTATTAGATGTTCAGTTTTCATTGTT

mRNA sequence

GTTGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAACTCAGGTGTAAGAATAGGAATGAGATTCGAACCCTGCGTTATAATTTCTTGACCACCGAACTGATTGCAATAAGACCGTAAAAATAACAAAAATTCCGTCGCTACTTGGCGTTGGCGTAGCCTCGATAGGCATCTGGGAAGGAGCTTCATTCATCTGAGGTAGAGCGACTTCACGAACAGCGAGAGACGGAGAAATGGCCTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGACTTACAAAGAACTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGGGAATGCAGTGGAGTCGAGCCGCAATTGTGGGCAAGATATGACATGGGCATTGAAAGGGTTGCTCGTCTAGAGGGTTTGAGCGAGGCACAGATCTCGAAGGCACTTGAAGACCTAGTCAAAGTTGGGGCATCCTGAAGGAGTAATCTGCTGTGCTATTGTACTGCAACAGACGTCAATAAATGCACGAGTGGAACGTTTGTTGAGATGCTTTTGTGTTTACATTCTGTTCGCTCAGCTCTTTTGAGATTATTGCTCAAATATTCATCTTCAGAAATCATGTTTCTGGTACGTATGTCTATTTGTCTATATGGAGAGTTATTGCCATAATGGTGATAATGAGTTCCACATTTTCCTCAAACAATTGGTCACAATAATTTCATAGAATTGGATACGTTCTATTTTTAGATGGAATGGATCTAAAATGCTTATTTCTATCTGAAATTTTCATCTTCATTCAAGTATCTTTTTTTATTAGATGTTCAGTTTTCATTGTT

Coding sequence (CDS)

ATGGCCTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGACTTACAAAGAACTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGGGAATGCAGTGGAGTCGAGCCGCAATTGTGGGCAAGATATGACATGGGCATTGAAAGGGTTGCTCGTCTAGAGGGTTTGAGCGAGGCACAGATCTCGAAGGCACTTGAAGACCTAGTCAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Homology
[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-36
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRG +SK++KELRILLCQ+SP+SAP R FVEK YK+LK+LNPK PILIRECSGV+PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-18
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 11  LKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match: P0CB80 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-18
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 11  LKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-18
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 4  RGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQLWAR 63
          RG+L   L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 70

Query: 64 YDMGIERVARLEGLSEAQISKALEDLV 91
          Y  G E+   L   S  Q+++ALE+++
Sbjct: 71 YAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17
Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0 

Query: 11 LKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQLWARYDMGIER 70
          L+E+RI LCQ SP S   R F+EK Y ELK  NP  PILIRECS V+P+LWARY  G E+
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 VARLEGLSEAQISKALEDLV 91
             L   S  Q+++ALE+++
Sbjct: 76 NVPLNNFSADQVTRALENVL 95

[Close]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match: XP_023526206.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (484), Expect = 4.58e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189 bits (479), Expect = 2.66e-60
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEK YKELKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match: XP_022983615.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita maxima])

HSP 1 Score: 186 bits (473), Expect = 2.19e-59
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEK YKELKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQILKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (471), Expect = 4.41e-59
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEK YK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 184 bits (467), Expect = 1.80e-58
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPAR FVEK YK+LKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARGFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 189 bits (479), Expect = 1.29e-60
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEK YKELKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match: A0A6J1J6D3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482169 PE=3 SV=1)

HSP 1 Score: 186 bits (473), Expect = 1.06e-59
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEK YKELKTLNPKFPILIRECSGVEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQILKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 186 bits (471), Expect = 2.14e-59
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEK YK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 186 bits (471), Expect = 2.14e-59
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEK YK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match: A0A0A0LDA2 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=3 SV=1)

HSP 1 Score: 184 bits (467), Expect = 8.71e-59
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEK YK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Cp4.1LG03g09300 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-37
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 0 

Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKTYKELKTLNPKFPILIRECSGVEPQL 60
          MAWRG +SK++KELRILLCQ+SP+SAP R FVEK YK+LK+LNPK PILIRECSGV+PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g09300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIJ21.8e-3673.68NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal... [more]
P0CB791.7e-1854.12NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=... [more]
P0CB801.7e-1854.12NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O... [more]
Q023704.9e-1852.87NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99... [more]
Q4R5E21.4e-1753.75NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula... [more]
BLAST of Cp4.1LG03g09300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526206.14.58e-61100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita pep... [more]
XP_022935669.12.66e-6098.95NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos... [more]
XP_022983615.12.19e-5997.89NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita max... [more]
XP_008465169.14.41e-5995.79PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis... [more]
XP_038906356.11.80e-5894.74NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida][more]
BLAST of Cp4.1LG03g09300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F6281.29e-6098.95NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A6J1J6D31.06e-5997.89NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A5A7T2I62.14e-5995.79NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var... [more]
A0A1S3CN672.14e-5995.79NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=... [more]
A0A0A0LDA28.71e-5994.74L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8454... [more]
BLAST of Cp4.1LG03g09300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47890.11.3e-3773.68NADH-ubiquinone oxidoreductase B8 subunit, putative [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..93
e-value: 4.8E-23
score: 92.6
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 28..78
e-value: 3.0E-12
score: 46.2
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..93
e-value: 7.3E-31
score: 108.3
NoneNo IPR availablePIRSRPIRSR005822-1PIRSR005822-1coord: 1..91
e-value: 1.6E-37
score: 125.8
NoneNo IPR availablePANTHERPTHR12878:SF5BNAANNG07980D PROTEINcoord: 1..94
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PIRSFPIRSF005822NDUA2coord: 1..95
e-value: 1.0E-38
score: 129.8
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..94
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g09300.1Cp4.1LG03g09300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I