Cp4.1LG03g08960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g08960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ubiquitin receptor RAD23
Location	Cp4.1LG03: 5757361 .. 5761687 (-)
RNA-Seq Expression	Cp4.1LG03g08960
Synteny	Cp4.1LG03g08960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGCACTGCTCGTGAGTACCATTATTTCAGATTCTTAGTGTAATATAGCAAAAGTCAGTGCCCAACTCACCGGTCGCGCCCTGCTTCCTGCCAAATCTAGGGTTCTCTTCCATCTCTGCTGCGTTTCAGGTTCCTTCCTCCTGACACGCTGTCGTTTTTGCCCCTCTCCTTCTTCCCCTTCTGCCAATTCCTTGAAATGAAGCTCACTGTGAAGACCCTCAAAGGGAGCCACTTTGAAATTAGGGTTCAGCCCACCGACACCGTAAGTTCTAACGTTTCCTTTTTCGTTTGTTTTAACCTTCTCCATTGCTTCATGTCAATATTTGGGCTTGTAGTTAATTTATTGATGTACCCGAGTATGCCACCATTGACCTAGCTGGAAATCTTGAGCTTAGTTTAATTGCTTTTTCCTTTAATATAATTGGAATAGTGGAAACTACTGGTGGAATTGTTTGGAATTGAAAAGATTTTTAAATTAGGGTTTCTTGTGCTACTTAATCTGGGAGTTGCTTTTCTTTCTGAATGACGATCGCATAATGTTTTTTTTTCTTTTTTTAATACTTTTTATTTGAATTGTTCGTGATCTGCTGGATTTGCATTGCTTGAACACAAGTTGGAGAAGTCTAAGATATCATGTAGTGTACTGTTCTTGTTGGGGATGCCGTTTTAGTGTAGAAGCTAACTAAGTATTGTTCTTGATCATTTGATGTAACCCACCATTTGTAATCTAGAAAGTTGAAGAAATGATTTTCAATCCTACAATTTGAAATCTGAGAAATGGTTTTAAACTCTTTATTTGTTTTTGGAACGATGAATGTAATTAAAATTTTTGTTTGAATGGTAGCTGGAAAAGAACAAAAAACAATACTTCTACCTATATAGGCTTTTAATCTTGATTTATATTAAAAAATTAACGTTTGCCAAGGTTTAGTAAGTAATTTAACTCAAAATTCTATGAAATCATTCAAAATTTGATCATTTTTGTCAGAAAAATTTTCAACGTAAAAACAAGATAAATCATTCTCTTTTATGTGATTACAAACATTCGAATATATTTTAAATTCATTATGATTGGAAATCCCTCGAAATCTTGAGCATCAAAATAAACTGGGTTTTTGTTTCCTTTTATTTATTTTATTTTTAAGTGTAAAATTTCTGGTGAAGGTGATGGCTGTAAAGAAAACTATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACACAATGGCAAAGTTCTGAAAGATGAAAGTACACTGGCAGAAAACAAAGTATCTGAAGAGGGCTTTCTTGTTGTCATGCTCAGCAAGGTATCTTTGGTCCTGTAATTTTCTTAATATAAGAAGCACTAAACAAATGTTTTCTTTTTTTTTTTTTTTTTTGATTTTAATGGATGACTGAAATGTGAAATATGGTTGTGCTCAATTGTATGCATTTGTGTCTTCTGCAGAGCAAGACATCAGGCTCAGCAGGGCAGTCGTCAACTCAGGTAATGCTGCTCATTTTTGTTGCAAGTTGTTTATGATTCTTTAATGTTAACCTCCTCTGGATCCTATTTATTGCAGCCTGCTCAAAGCACCCCTGTTGCTCATCCAATTTTAAATTCGACTCCTGCTACCCAAGTTACACCATCGCCAACTCCTGCGCCTCAAGCTTCCACCCAAGCACAATTGTCGTTAGTTTTTCAAGAATGGTCTTCTGTATGCATTTTCCCTGATCAGTTGAGTAATTATAATCCATATGCATTTTTTGTTCTTGTTTTGCAGTGCCCCCAAGAACACTACGTCTACTTCAGACAGGGTGACAGATAGGTATGTCTTCTATTTCGTATTCATATTTTTTAACTTCAAGAGGCATGAAATTGGTTAGTAAGTCACCTTCTATTTCCTAGTATTAAATCTACGCTGCAATATAACACATATCAAATCTGATAAAAGCTACAGACTGAAATACTTTTATAGGAGTTCTTGATTATTAAGTATTGAGTAATATGTTTCCTCCTCTTTTGCTTTATTTATAAATGAAGCATTTTTCCTACTGGTGGGAAAGTTTCTCATTCTTTTTTTGGGGGGGATCATTTGCAGTATGCAAACAGATACATATGGTCAAGCAGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAATTAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGTATGTTTAAGTTGTATTCTATGCATTCTTTTGAAATCTGATCATAATATTTTGTCACTAATTGTGTTTTTTTTTTTTTTTTTTGTTCAGGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCCAGCCACTGAAACTGAGGCATCCCTTCCTGCACCTGCTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGTAAGTTGATGCATGAAAAACACTTTTGTTTGTTTCCTCACGTTCACTTATTTTTTATTGGGTTGCCATCATGCAGGAAGCACTTTCTGCTGGCGGTGGTGGCCTTGGATCTCTTGAATTCCTTAGAAACAATCCGCAGGTACTTAGTGCAACATCATTTATTGGGTTTTCCTTATTGATAAGCTCATTTTCTTTCTTTACTAGGTATCTTAGTGCATGGAGTGTCAAATCCGTTGTTTGGTCTAAGTCCTTTTTCACCTAATAGTTGTGTTTGTTTGCATCTTTTGACACGTTGGCTTGCGTTAAATGTATCAACTAAAAGTTACAAACATTTGAACTAAAAAACGCGTATTGATTATATTTGTCCAGTCATATCATTCTGTTATTTGTATATCACTTGTACACAGGCCCAAAATCGTGATTTATTTTATATCGTATGGACCATGCATTTGAGTAGAACTAAATGCGAAGTAGATACTGAATGAGGTTTCTTATCATCATTCATATTATAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGGTCTACACATCCTTCTGCTTTGAAATTTGCTTAGTGGTTATAATCATGGTTTTCCTAGAGTTAAATCTTTTGCTTCTGGTGGCAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCACGCAGAGTTCCTTCAGTTAATTAATGAACCTGTTGACAATTTTGAGGGGTCGGTCTTACAATACCATGATCTGGTCAATTTTAAATCTCGTTAGTTTTGCAGTTCTTTAGTTGTGATTGATCTCGTGCATATAAGATGATAGTTGCATAGATAACCCTCGTCTTATTTTTCTCCCATCACCAAATTCGCAGCGCTTCTGCTGTAGGTTCCTGCATGGGACAATAATACATAATCAGGTCAGGTGTATCCATCTTTAGAACAAGCCATAGGTAAACTGGTTAAGCCATAGATTGAGATCAGGTGTTCAAATCCCTCCGTTTGAACTACAAAAACATAGTCATGGGTAGATTAAGAACTGTTTCTGCGACTGGTTTACTCGAGATGTTGTTCACTCGATTGATTATTATTTCATTGGTTGAATCTCTTTTGAATTGACATCGTTTGCATCCATCTGTAGAACTATAAACTATGTTCTTTCTTTCAGAGAAATGTTTGAACAGGCTGAGCCAGACATGCCTCATGCCATTAATGTTACTCCAGACGAACAGGCAGCCATTGAACGAGTACGAACTCCTTTATATTCCCTGAGACGTCTCTTTGTTTTCCCTCTTCAAACAAAATCTTTGTGCTCATCATTTTGCTGCTTGCTCCCTTGTATGTAGCTCGAGGCAATGGGATTCGATCGAGCCTTGGTGATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGACGATTAACAAAAGAAGAATTAATTAATGTTAACCGCTGTGGATTCATTATTTTTGGTGCTGAGGTGAATTGTTTCCCTTTTCAGCATTATTCCGAGTCTGTTCTTGCATTGCATTTTACATACTCCACTAATAAATAGGAAAATTAATTGTTCAAGTGTATGGTGTTTCCGATTTAGAGAAGTGGAATCTTTATGTTTTATTTAAAGCTCATTTGTTGGTAGCTAGTTCGTTAGAACATTATTGCAGATAGATCATGAGACTTTATAAACTTTTCTGGTTATCATGTAAATATAATTGTTGAAAAATATCAACAGATTTTGACATGACATTTTGTTTCTTGTGA

mRNA sequence

CGTGCACTGCTCGTGAGTACCATTATTTCAGATTCTTAGTGTAATATAGCAAAAGTCAGTGCCCAACTCACCGGTCGCGCCCTGCTTCCTGCCAAATCTAGGGTTCTCTTCCATCTCTGCTGCGTTTCAGGTTCCTTCCTCCTGACACGCTGTCGTTTTTGCCCCTCTCCTTCTTCCCCTTCTGCCAATTCCTTGAAATGAAGCTCACTGTGAAGACCCTCAAAGGGAGCCACTTTGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTAAAGAAAACTATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACACAATGGCAAAGTTCTGAAAGATGAAAGTACACTGGCAGAAAACAAAGTATCTGAAGAGGGCTTTCTTGTTGTCATGCTCAGCAAGAGCAAGACATCAGGCTCAGCAGGGCAGTCGTCAACTCAGCCTGCTCAAAGCACCCCTGTTGCTCATCCAATTTTAAATTCGACTCCTGCTACCCAAGTTACACCATCGCCAACTCCTGCGCCTCAAGCTTCCACCCAAGCACAATTGTCTGCCCCCAAGAACACTACGTCTACTTCAGACAGGGTGACAGATAGTATGCAAACAGATACATATGGTCAAGCAGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAATTAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCCAGCCACTGAAACTGAGGCATCCCTTCCTGCACCTGCTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAAGCACTTTCTGCTGGCGGTGGTGGCCTTGGATCTCTTGAATTCCTTAGAAACAATCCGCAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCACGCAGAGTTCCTTCAGTTAATTAATGAACCTGTTGACAATTTTGAGGGAGAAATGTTTGAACAGGCTGAGCCAGACATGCCTCATGCCATTAATGTTACTCCAGACGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTCGATCGAGCCTTGGTGATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGACGATTAACAAAAGAAGAATTAATTAATGTTAACCGCTGTGGATTCATTATTTTTGGTGCTGAGGTGAATTGTTTCCCTTTTCAGCATTATTCCGAGTCTGTTCTTGCATTGCATTTTACATACTCCACTAATAAATAGGAAAATTAATTGTTCAAGTGTATGGTGTTTCCGATTTAGAGAAGTGGAATCTTTATGTTTTATTTAAAGCTCATTTGTTGGTAGCTAGTTCGTTAGAACATTATTGCAGATAGATCATGAGACTTTATAAACTTTTCTGGTTATCATGTAAATATAATTGTTGAAAAATATCAACAGATTTTGACATGACATTTTGTTTCTTGTGA

Coding sequence (CDS)

ATGAAGCTCACTGTGAAGACCCTCAAAGGGAGCCACTTTGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTAAAGAAAACTATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAACAATTATTGATACACAATGGCAAAGTTCTGAAAGATGAAAGTACACTGGCAGAAAACAAAGTATCTGAAGAGGGCTTTCTTGTTGTCATGCTCAGCAAGAGCAAGACATCAGGCTCAGCAGGGCAGTCGTCAACTCAGCCTGCTCAAAGCACCCCTGTTGCTCATCCAATTTTAAATTCGACTCCTGCTACCCAAGTTACACCATCGCCAACTCCTGCGCCTCAAGCTTCCACCCAAGCACAATTGTCTGCCCCCAAGAACACTACGTCTACTTCAGACAGGGTGACAGATAGTATGCAAACAGATACATATGGTCAAGCAGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAATTAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGTCCAGCCACTGAAACTGAGGCATCCCTTCCTGCACCTGCTTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAAGCACTTTCTGCTGGCGGTGGTGGCCTTGGATCTCTTGAATTCCTTAGAAACAATCCGCAGTTTCAAGCCTTGCGGACGATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCACGCAGAGTTCCTTCAGTTAATTAATGAACCTGTTGACAATTTTGAGGGAGAAATGTTTGAACAGGCTGAGCCAGACATGCCTCATGCCATTAATGTTACTCCAGACGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTCGATCGAGCCTTGGTGATCGAGGCATTTTTGGCATGCGATCGCAACGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGACGATTAA

Protein sequence

MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQASTQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPLNMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Homology

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BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 491.5 bits (1264), Expect = 8.6e-138
Identity = 271/389 (69.67%), Postives = 315/389 (80.98%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK IED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +           S P +  T S  PA  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSV---------SQPVSATTSSTKPAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ   S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNT 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A+  APASG PN+
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSG------AAPVAPASGGPNS 240

Query: 241 APLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           +PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLL
Sbjct: 241 SPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 384
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 468.8 bits (1205), Expect = 6.0e-131
Identity = 256/386 (66.32%), Postives = 308/386 (79.79%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKK IED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQP  +T            T    S T A  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTT------------TSTISSTTLAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ+      N+T   ++ T   Q+DTYGQAAS LV+G+++EQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  E + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAP-PPSGGPNSSPL 240

Query: 241 NMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 300
           ++FPQEA+S A GG LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLI
Sbjct: 241 DLFPQEAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLI 300

Query: 301 QDHHAEFLQLINEPVDNFEG--EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVI 360
           Q++ AEFLQL+NEP +  +G  ++F+Q + +MPH++NVTP+EQ +IERLEAMGFDRA+VI
Sbjct: 301 QENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVI 360

Query: 361 EAFLACDRNEELAANYLLENSGDFDD 384
           EAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 EAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 1.0e-106
Identity = 219/390 (56.15%), Postives = 273/390 (70.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTL GS+FEI V+P D V  VK  IE ++G + YP  +Q+LIH GKVLKDE+TL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           EN V E  F+V+MLSK+K S S   +++ PA S     P   +TP      +  P P + 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPS--ATQPQTVATPQVSAPTASVPVPTSG 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           T          T+ +     S+QTD YGQAASNLVAG  LE T+QQ++DMGGG+WDR+TV
Sbjct: 121 T---------ATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEV-----AVPVGRFGSGP-ATETEASLPAPASGA 240
           VRALRAA+NNPERAV+YLYSGIP  AE+     A   G   + P A   +A+ PA A+G 
Sbjct: 181 VRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGG 240

Query: 241 PNTAPLNMFPQEALSA-GGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNP 300
           PN  PLN+FPQ   +A  G G G+L+FLRN+ QFQALR MV  NPQILQPMLQELGKQNP
Sbjct: 241 PNANPLNLFPQGMPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP 300

Query: 301 QLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDR 360
           QL+RLIQ+H A+FL+LINEPV+  E  M EQ E  MP A+ VTP+E+ AIERLE MGFDR
Sbjct: 301 QLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVTPEEREAIERLEGMGFDR 360

Query: 361 ALVIEAFLACDRNEELAANYLLENSGDFDD 384
           A+V+E F AC++NEELAANYLL++  +F+D
Sbjct: 361 AMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-104
Identity = 229/423 (54.14%), Postives = 288/423 (68.09%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTLKG+HFEI V+P D+V+ VKK IE +QG D YP  +Q+LIH GKVLKDE+T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSEEGFLVVMLSKSK------TSGSAGQS---STQPAQSTPVAHPILNSTPATQV-- 120
           ENKV+E  F+V+M++KSK      +S SAG S   S  P+ S P   P   ++ +  V  
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 --------TPSPTPAPQASTQAQLSAP---------KNTTSTSDRVTDSMQTDTYGQAAS 180
                    P+PTPAP A+T+  ++ P          ++T   D      Q D YGQAAS
Sbjct: 121 APTRPPPPAPTPTPAPVAATET-VTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAAS 180

Query: 181 NLVAGNNLEQTIQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAE---VA 240
           NL AG+NLE TIQQ++DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AE   VA
Sbjct: 181 NLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVA 240

Query: 241 VPVGRFG--SGPATETEASLPAPASGAPNTAPLNMFPQEALSAGGG-GLGSLEFLRNNPQ 300
            P    G  + P  +T+    APASG PN  PL++FPQ   + GG  G G+L+FLRN+ Q
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQ 300

Query: 301 FQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVD------NFEGE 360
           FQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+      N  G+
Sbjct: 301 FQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQ 360

Query: 361 MFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGD 384
           M   A    P AI VT +E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++  +
Sbjct: 361 M--AAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHE 419

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 5.0e-93
Identity = 200/394 (50.76%), Postives = 262/394 (66.50%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK++VKTLKGS F+I V     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD++TL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAH--PILNSTPATQVTPSPTPAPQ 120
           ENKV E  FLV+ML + K     G SS+ PA S   ++  P   + PA   + +P  AP 
Sbjct: 61  ENKVLENSFLVIMLRQGK-----GSSSSAPATSKAPSNQAPPTQTVPAAPASQAPV-APA 120

Query: 121 ASTQAQLSAPKNTTSTS--DRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWD 180
            +    +SAP  T + S    V  S + D YGQA SNLVAG+NLE TIQ +++MGGG WD
Sbjct: 121 TTVPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWD 180

Query: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATE----TEASLPAPAS 240
           R+ V+ AL AA+NNPERAV+YLYSG+PE  ++ VP         T+    T+ + P+  S
Sbjct: 181 RDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILS 240

Query: 241 GAPNTAPLNMFPQEA--LSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGK 300
             PN +PL++FPQ     S    GLG+L+ LRNN QF+ L ++V  NPQILQP+LQELGK
Sbjct: 241 SGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGK 300

Query: 301 QNPQLLRLIQDHHAEFLQLINEPVDNFEGE-MFEQAEPDMPHAINVTPDEQAAIERLEAM 360
           QNPQ+L+LIQ++ AEFL LINEP +  + E + +Q    MP  I VTP+E  AI RLEAM
Sbjct: 301 QNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAM 360

Query: 361 GFDRALVIEAFLACDRNEELAANYLLENSGDFDD 384
           GFDRALV++ F AC+++E+LAANYLL++  +FDD
Sbjct: 361 GFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Cp4.1LG03g08960 vs. NCBI nr
Match: XP_023528872.1 (ubiquitin receptor RAD23b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 733 bits (1893), Expect = 2.52e-266
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. NCBI nr
Match: XP_022934936.1 (ubiquitin receptor RAD23b-like [Cucurbita moschata])

HSP 1 Score: 726 bits (1875), Expect = 1.39e-263
Identity = 380/383 (99.22%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVA PILNS PATQVTPSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. NCBI nr
Match: KAG6581617.1 (Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 726 bits (1874), Expect = 1.98e-263
Identity = 380/383 (99.22%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVA PILNSTPATQV PSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSTPATQVIPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. NCBI nr
Match: XP_022983432.1 (ubiquitin receptor RAD23b-like [Cucurbita maxima])

HSP 1 Score: 723 bits (1866), Expect = 3.28e-262
Identity = 378/383 (98.69%), Postives = 378/383 (98.69%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVA PILNSTPAT VTPSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSTPATHVTPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQA LSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAHLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. NCBI nr
Match: XP_038906275.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 688 bits (1776), Expect = 1.97e-248
Identity = 362/387 (93.54%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSK SGSAGQSSTQPAQ+ PVA PILNST ATQVTPSPTPAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKASGSAGQSSTQPAQNPPVAQPILNSTSATQVTPSPTPAPQAP 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQA  SAPKNTTSTSDR TD++QTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAPSSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ SLPAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDTSLPAPVSGAPNTAPL 240

Query: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQEALSAGGG     LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGSGSGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
           RLIQDHH EFLQLINEP+DNFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHTEFLQLINEPIDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL
Match: A0A6J1F373 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1)

HSP 1 Score: 726 bits (1875), Expect = 6.75e-264
Identity = 380/383 (99.22%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVA PILNS PATQVTPSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL
Match: A0A6J1IZA3 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1)

HSP 1 Score: 723 bits (1866), Expect = 1.59e-262
Identity = 378/383 (98.69%), Postives = 378/383 (98.69%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVA PILNSTPAT VTPSPTPAPQAS
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSTPATHVTPSPTPAPQAS 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQA LSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV
Sbjct: 121 TQAHLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300
           NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ
Sbjct: 241 NMFPQEALSAGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQ 300

Query: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360
           DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF
Sbjct: 301 DHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVIEAF 360

Query: 361 LACDRNEELAANYLLENSGDFDD 383
           LACDRNEELAANYLLENSGDFDD
Sbjct: 361 LACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL
Match: A0A1S3CI18 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 1.84e-246
Identity = 360/387 (93.02%), Postives = 369/387 (95.35%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKK IED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTS SAGQSSTQPAQ+ PVA P+L+STPA QVTPSPTPAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQA  SA KNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGG WDRETV
Sbjct: 121 TQAPSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+AS+PAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPL 240

Query: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQEALSAGGGG    LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL
Match: A0A0A0LF05 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1)

HSP 1 Score: 678 bits (1750), Expect = 1.02e-244
Identity = 360/391 (92.07%), Postives = 370/391 (94.63%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKK IED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTS SAGQSSTQPAQ+ PVA P+L+STPA QVTPSPTPAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 TQAQL----SAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWD 180
           TQA      SAPKNTTSTS+RVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWD
Sbjct: 121 TQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWD 180

Query: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPN 240
           RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+AS+PAP SGAPN
Sbjct: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPN 240

Query: 241 TAPLNMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN 300
           TAPLNMFPQEALSAG GG    LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN
Sbjct: 241 TAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN 300

Query: 301 PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFD 360
           PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFD
Sbjct: 301 PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFD 360

Query: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 383
           RALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 391

[Close]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL
Match: A0A6J1DGY9 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=1)

HSP 1 Score: 677 bits (1746), Expect = 3.56e-244
Identity = 357/387 (92.25%), Postives = 366/387 (94.57%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKK IEDIQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKVSEEGFLVVMLSKSKTSGS GQSSTQPAQS PVA P+LNSTP TQVTPSPTPA QA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQA  SAP+NTTSTSDRV D++QTDTYGQAASNLVAGNNLEQTIQQ+MDMGGGNWDRETV
Sbjct: 121 TQAPSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
           VRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSG ATET+ASL APASGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPL 240

Query: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           NMFPQEALS GGGG    LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
           RLIQDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTP EQAAIERLEAMGFDRA V
Sbjct: 301 RLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASV 360

Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
           IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Cp4.1LG03g08960 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 492.7 bits (1267), Expect = 2.8e-139
Identity = 271/389 (69.67%), Postives = 314/389 (80.72%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK IED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S QP  +T               T S  PA  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSAT---------------TSSTKPAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ   S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNT 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A+  APASG PN+
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSG------AAPVAPASGGPNS 240

Query: 241 APLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           +PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLL
Sbjct: 241 SPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 384
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Cp4.1LG03g08960 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 491.5 bits (1264), Expect = 6.1e-139
Identity = 271/389 (69.67%), Postives = 315/389 (80.98%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK IED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +           S P +  T S  PA  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSV---------SQPVSATTSSTKPAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ   S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNT 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A+  APASG PN+
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSG------AAPVAPASGGPNS 240

Query: 241 APLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           +PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLL
Sbjct: 241 SPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 384
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Cp4.1LG03g08960 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 486.1 bits (1250), Expect = 2.6e-137
Identity = 274/401 (68.33%), Postives = 316/401 (78.80%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK IED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQ-STPVAHPILNSTPATQVT--PSPTPAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +  S PV+    ++ PA   T   SP PA 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 121 QASTQAQLSAPKNTTSTSDRV---------TDSMQTDTYGQAASNLVAGNNLEQTIQQLM 180
               Q Q +      S +                QTDTYGQAAS LV+G++LEQ +QQ+M
Sbjct: 121 PIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQIM 180

Query: 181 DMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEA 240
           +MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A
Sbjct: 181 EMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSG------A 240

Query: 241 SLPAPASGAPNTAPLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           +  APASG PN++PL++FPQE ++A G G LG+LEFLRNN QFQ LRTMVH+NPQILQPM
Sbjct: 241 APVAPASGGPNSSPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPDEQAA 360
           LQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTP EQ A
Sbjct: 301 LQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEA 360

Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 384
           I+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 IQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Cp4.1LG03g08960 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 468.8 bits (1205), Expect = 4.3e-132
Identity = 256/386 (66.32%), Postives = 308/386 (79.79%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKK IED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSKT+ SAG SSTQP  +T            T    S T A  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTT------------TSTISSTTLAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ+      N+T   ++ T   Q+DTYGQAAS LV+G+++EQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
            RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  E + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAP-PPSGGPNSSPL 240

Query: 241 NMFPQEALS-AGGGGLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 300
           ++FPQEA+S A GG LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLI
Sbjct: 241 DLFPQEAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLI 300

Query: 301 QDHHAEFLQLINEPVDNFEG--EMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALVI 360
           Q++ AEFLQL+NEP +  +G  ++F+Q + +MPH++NVTP+EQ +IERLEAMGFDRA+VI
Sbjct: 301 QENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVI 360

Query: 361 EAFLACDRNEELAANYLLENSGDFDD 384
           EAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 EAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Cp4.1LG03g08960 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 443.7 bits (1140), Expect = 1.5e-124
Identity = 253/389 (65.04%), Postives = 296/389 (76.09%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKTIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKK IED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAHPILNSTPATQVTPSPTPAPQAS 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +           S P +  T S  PA  ++
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSV---------SQPVSATTSSTKPAAPST 120

Query: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
           TQ   S+P   +    +   + QTDTYGQAAS LV+G++LEQ +QQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180

Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGR---FGSGPATETEASLPAPASGAPNT 240
            RALRAAYNNPERAVDYLYSGIP++AEVAVPV      GSG      A+  APASG PN+
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSG------AAPVAPASGGPNS 240

Query: 241 APLNMFPQEALSAGGGG-LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
           +PL++FPQE ++A G G LG+LEFLRNN                     QELGKQNPQLL
Sbjct: 241 SPLDLFPQETVAAAGSGDLGTLEFLRNND--------------------QELGKQNPQLL 300

Query: 301 RLIQDHHAEFLQLINEPVD--NFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRA 360
           RLIQ++ AEFLQL+NEP +  + EG+MF+Q E +MPHAINVTP EQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 351

Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 384
           LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g08960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	8.6e-138	69.67	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	6.0e-131	66.32	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	1.0e-106	56.15	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	1.3e-104	54.14	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	5.0e-93	50.76	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Cp4.1LG03g08960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528872.1	2.52e-266	100.00	ubiquitin receptor RAD23b-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934936.1	1.39e-263	99.22	ubiquitin receptor RAD23b-like [Cucurbita moschata]	[more]
KAG6581617.1	1.98e-263	99.22	Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983432.1	3.28e-262	98.69	ubiquitin receptor RAD23b-like [Cucurbita maxima]	[more]
XP_038906275.1	1.97e-248	93.54	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g08960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F373	6.75e-264	99.22	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1	[more]
A0A6J1IZA3	1.59e-262	98.69	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1	[more]
A0A1S3CI18	1.84e-246	93.02	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1	[more]
A0A0A0LF05	1.02e-244	92.07	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1	[more]
A0A6J1DGY9	3.56e-244	92.25	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=...	[more]

BLAST of Cp4.1LG03g08960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.2	2.8e-139	69.67	Rad23 UV excision repair protein family	[more]
AT1G79650.1	6.1e-139	69.67	Rad23 UV excision repair protein family	[more]
AT1G79650.4	2.6e-137	68.33	Rad23 UV excision repair protein family	[more]
AT1G16190.1	4.3e-132	66.32	Rad23 UV excision repair protein family	[more]
AT1G79650.3	1.5e-124	65.04	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 333..349 score: 61.5 coord: 365..380 score: 62.78 coord: 284..306 score: 59.68 coord: 350..364 score: 65.76
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..382 e-value: 2.3E-131 score: 436.5
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 160..200 e-value: 7.7E-7 score: 38.7 coord: 339..376 e-value: 1.3E-7 score: 41.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 339..374 e-value: 2.7E-11 score: 43.1 coord: 160..198 e-value: 5.8E-16 score: 58.0
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 336..377 score: 15.848196
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 158..201 score: 13.366195
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 256..299 e-value: 3.3E-7 score: 40.0
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 2.4E-22 score: 90.3
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 2.2E-16 score: 59.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 18.69339
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 258..313 e-value: 1.1E-23 score: 82.7
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 248..314 e-value: 2.5E-27 score: 96.3
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 254..320
None	No IPR available	GENE3D	1.10.8.10		coord: 153..203 e-value: 1.2E-22 score: 81.5
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 9.7E-26 score: 91.3
None	No IPR available	GENE3D	1.10.8.10		coord: 330..378 e-value: 6.0E-24 score: 85.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..140
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..382
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..382
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 3.23572E-29 score: 106.102
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 154..203 e-value: 2.0898E-31 score: 111.55
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..84
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 321..381
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 157..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g08960.1	Cp4.1LG03g08960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding