Cp4.1LG03g08670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATGGGGAAAAATGGAAAGAGAACAAAAATGGAAAGCATGATTGTCTTCTTCTCCGTCTTTCACGAGCCACGGCGTATGCAGCCGCCCCGTTGTTTCTTCAATCTTCTTCTCCGGGGAGCCTTAGGCGGCGGGGATACGCAATAAGTGGATACAAATGTCTTTATTGTATCAGGTACCGATTAGGGAAATTTATGCTAAAGAGACAACCAGAGTTTTTCTTTCTTGCNGGAAATTTATGCTAAAGATACAACCAGAGTTTTTCTTTCTTGCTTTGCTAGATATGTGCGTGTCTTGTGCAATTCGCACAACTCCAGGTTATCGTCGCCGTTTTCTACCTATCAGGTTGTGCCGAAAATCTCATCAACAGATAGAGACTATAGTGCCAATTCGAATGTTGCACGCACGAACTGGCTGATCACAAAGCTTGGTAAAGAAGGAAAAATCGGAGAGGCACGTAGGGTGTTCGAGGAAATGCCCGATCGAGATGTGGTCTCATGGACTGCAGTAATTACAGGGTATATCAAATGTGGAATGATTGAGGAAGCTAAGAAGCTATTTGATAGAGATGACGCTATAAAGAATGTTGTTACTTGGACAGCATTGGTTAGTGGATATGTAAGATTGAGCCGGATTGAGGAGGCTAGAAGCTTGTTTGATGCCATGCCAGTTAAGAATGTTGTTTCGTGGAACACTATGATTGAAGGGTATGCGCGAAAGGGTTGGGTCGATCAGGCTTTTGATTTGTTTAAAAGAATGCCCGAGAGGAATGTGGTTTCTTGGAACACTGTTATTACAGCATTGATGAAAAGGAGGAGAGTAGATGAAGCTCAGGAGCTTTTTAACCAGATGCCGGAGAGAGATGTGATTTCTTGGACGGCCATGGTGGCTGGTTTGGCAAAAAATGGGAGAATTGATGATGCCCGTTTAGTGTTCGATAAAATGCCTGAGCGAAATGTGGTTTCCTGGAATGCAATAATTACTGGGTATGCTCAGAATATGCGGCTGGATGAGGCCTTTGAACTGTTTGAGAAAATTCCAGAGAGGGATGTGCCTTCATGGAACGCCATGATTACAGGGTTCATTCAAAACGGTAAGCTTGAAAGGGCAGTGGATTTGTTCTATAAAATGCCTAACAAAAATGTTGTTTCTTGGACAGCAATGATTTCTGGACATGTACAAGATGGGCAAAGTGAAGAAGCATTGAAGATTTTTTCAGAAATGCAAGCAGCCAACAATGTAAAACCAAATGAAGGTACTTTTGTCAGCGTGTTGGGTGCTTGTAGTAACTTAGCCGGTCTTTGCGAGGGACAACAAATTCACCAGATAATAAGTAAGTCAGTATACCAAGAAGTTACAGATGTAGTATCAGCTTTAATAAGCATGTATTCAAAATGTGGGGAGTTGGATATGGCTCGCAAGATATTCGATGATGGATCGACAAGCCACAGAGATGTAGTTTCTTGGAATGGGATGATTGCAGCCTATGCTCATCATGGCCATGGCTACAAAGCAATTCGTTTATTTGATGAAATGCAGGCATTGGGATTTCGTCCAGATAATGTCACCTATATCGCGTTGCTTTCTGCTTGTAGTCATGCTGGCCTTGTGGATGAGGGGTTGAAATACTTCGAAAATCTCGTAAGAGATGGGTCTATAACGCTAAGAGAAGATCATTTCACATGCTTGGTCGATCTTTTTGGCCGAGCGGGACGACTCCAAGAGGCATTTGATTTCATCAAGGGGCTTGAGGATAAGCCTTCATCGTCTGTTTGGGCAGCTCTTCTTGCTGGATGTAATGTTCATGGCAATATAGATTTGGGCAAGTTAACGGCTGAAAAGCTTTTGGAAACAGAACCAGAGAATGCAGGAACCTTTATGCTGCTATCTAACATATATGCTTCAACTGGAAAATGGAGAGAAGCTGCCAAAGTAAGGTTGAAAATGAAGGATAAGGGATTGAAGAAGCAACCTGGTTGCAGTTGGATAGAAGTTGGTAATGCAGTGCACGTGTTCGTAGTGGGCGACAATTCTCATTGCCAATCTGAAAATATTTATCCTTTACTTCATGATCTGCATATGAAAATGAAGAAGATTGGTCATACATTATATGAAGATTTAACAGTGGATTTGAATCTTGTGATTCCATGAGCCTGTAATTGGTGTCAAATTTGCTTGGCCAACCATATGTTCTTCAACGCTGCTACACCCAGAGGTTGGTTCAATTCCTATGTTCATCTCCATATCTCTTCCCTGCCATATTCACAGGCAAATGGCAAGCAGGGAAGCGAGCGGCTTGTACTGATGAGATTGCCTCCACCGTCAACAACTAAGCTAAATCTTGTGCCCTTTGCTACAGGTCTGTCTTCTTTGAGTCTATGAACTATGTTATTTAAAGAAAGGGATACAGTGGGAAGCAAATGTGAGATCCCACGTGAGTTGGAGAGAAGAACGAATCATTCTTTATAAGGGTGTGGAAATCTCTCCTTAGCATATGCGTTTTAAAAACCTTGAAGGAAAGCCTAGAAAGAAAAGCCGAAAGAGGACAATATTTGCTAGCGGTAGATTTTTCTATCCATTTCAATAACCGTACTTTTGTGCTTTGGCAACTTGAACAGTCCATCCATTTTTAAGTTCTTTGTTTTCGTACTTTTTAACTTATGGACATGGTAAAGTAGCAATCAAAGTAGTTGTTTAAAGAAGATACTTTTGTGCTTTAAAGATTGGTAGTGCTCTCCATGTGATTTTTCCTTTTAATTATCGTTGGTAGGGAATACCACATCGACTAATTAAGGAATTGATAATGAGTTTATAAGTAAGAAATTCATCTCAGTTTATGCTCAAAGTGGACAACATCATACCGACCCATATTTTTCTTATTTTTCAGTTGGATTGATGTTAATTATATCAACACTTTCAACCCAAACTAAATCAGAAGGTGGGGGATAAGTAAGGAATAATATATCGAAATATATGGGCAAAAATTTAACATTTATAGAACAATTACTATAAATTTTATTTTTTCTTTAAAAAAAAAAAAAATCCCCGTAAAATAAGATAACCTGAAAAAGGAAATTGTGGTGAAATCGGCTTTAGCTACACGCTACGGGTAACATTTCTTCAACCATAAAGTTTGCAGCTTTATCTTTTACTCAGCCCAATAGCCTCTGCCTCTGTTCTCTAATGGCTTCCTCTAAATCTAGTCCAATTCCTTCAATGGATATGCTCTGAAACTCCCAGTCCACGCCTCTACCTCGAACAACACACCGGAAAGGCCATGGCAATGACATGGCACATGGCGTTTTGGATCGCTAACATGGTTTGGGTGGCCTTGAGCGACTGTGTTTCTTCTTGTTTGGCCATCGCCGACGAGGTCGCGGGCTCCATCAGA AAAAATGGGGAAAAATGGAAAGAGAACAAAAATGGAAAGCATGATTGTCTTCTTCTCCGTCTTTCACGAGCCACGGCGTATGCAGCCGCCCCGTTGTTTCTTCAATCTTCTTCTCCGGGGAGCCTTAGGCGGCGGGGATACGCAATAAGTGGATACAAATGTCTTTATTGTATCAGATATGTGCGTGTCTTGTGCAATTCGCACAACTCCAGGTTATCGTCGCCGTTTTCTACCTATCAGGTTGTGCCGAAAATCTCATCAACAGATAGAGACTATAGTGCCAATTCGAATGTTGCACGCACGAACTGGCTGATCACAAAGCTTGCATTGATGAAAAGGAGGAGAGTAGATGAAGCTCAGGAGCTTTTTAACCAGATGCCGGAGAGAGATGTGATTTCTTGGACGGCCATGGTGGCTGGTTTGGCAAAAAATGGGAGAATTGATGATGCCCGTTTAGTGTTCGATAAAATGCCTGAGCGAAATGTGGTTTCCTGGAATGCAATAATTACTGGGTATGCTCAGAATATGCGGCTGGATGAGGCCTTTGAACTGTTTGAGAAAATTCCAGAGAGGGATGTGCCTTCATGGAACGCCATGATTACAGGGTTCATTCAAAACGGTAAGCTTGAAAGGGCAGTGGATTTGTTCTATAAAATGCCTAACAAAAATGTTGTTTCTTGGACAGCAATGATTTCTGGACATGTACAAGATGGGCAAAGTGAAGAAGCATTGAAGATTTTTTCAGAAATGCAAGCAGCCAACAATGTAAAACCAAATGAAGGTACTTTTGTCAGCGTGTTGGGTGCTTGTAGTAACTTAGCCGTCCAATTCCTTCAATGGATATGCTCTGAAACTCCCAGTCCACGCCTCTACCTCGAACAACACACCGGAAAGGCCATGGCAATGACATGGCACATGGCGTTTTGGATCGCTAACATGGTTTGGGTGGCCTTGAGCGACTGTGTTTCTTCTTGTTTGGCCATCGCCGACGAGGTCGCGGGCTCCATCAGA AAAAATGGGGAAAAATGGAAAGAGAACAAAAATGGAAAGCATGATTGTCTTCTTCTCCGTCTTTCACGAGCCACGGCGTATGCAGCCGCCCCGTTGTTTCTTCAATCTTCTTCTCCGGGGAGCCTTAGGCGGCGGGGATACGCAATAAGTGGATACAAATGTCTTTATTGTATCAGATATGTGCGTGTCTTGTGCAATTCGCACAACTCCAGGTTATCGTCGCCGTTTTCTACCTATCAGGTTGTGCCGAAAATCTCATCAACAGATAGAGACTATAGTGCCAATTCGAATGTTGCACGCACGAACTGGCTGATCACAAAGCTTGCATTGATGAAAAGGAGGAGAGTAGATGAAGCTCAGGAGCTTTTTAACCAGATGCCGGAGAGAGATGTGATTTCTTGGACGGCCATGGTGGCTGGTTTGGCAAAAAATGGGAGAATTGATGATGCCCGTTTAGTGTTCGATAAAATGCCTGAGCGAAATGTGGTTTCCTGGAATGCAATAATTACTGGGTATGCTCAGAATATGCGGCTGGATGAGGCCTTTGAACTGTTTGAGAAAATTCCAGAGAGGGATGTGCCTTCATGGAACGCCATGATTACAGGGTTCATTCAAAACGGTAAGCTTGAAAGGGCAGTGGATTTGTTCTATAAAATGCCTAACAAAAATGTTGTTTCTTGGACAGCAATGATTTCTGGACATGTACAAGATGGGCAAAGTGAAGAAGCATTGAAGATTTTTTCAGAAATGCAAGCAGCCAACAATGTAAAACCAAATGAAGGTACTTTTGTCAGCGTGTTGGGTGCTTGTAGTAACTTAGCCGTCCAATTCCTTCAATGGATATGCTCTGAAACTCCCAGTCCACGCCTCTACCTCGAACAACACACCGGAAAGGCCATGGCAATGACATGGCACATGGCGTTTTGGATCGCTAACATGGTTTGGGTGGCCTTGAGCGACTGTGTTTCTTCTTGTTTGGCCATCGCCGACGAGGTCGCGGGCTCCATCAGA KNGEKWKENKNGKHDCLLLRLSRATAYAAAPLFLQSSSPGSLRRRGYAISGYKCLYCIRYVRVLCNSHNSRLSSPFSTYQVVPKISSTDRDYSANSNVARTNWLITKLALMKRRRVDEAQELFNQMPERDVISWTAMVAGLAKNGRIDDARLVFDKMPERNVVSWNAIITGYAQNMRLDEAFELFEKIPERDVPSWNAMITGFIQNGKLERAVDLFYKMPNKNVVSWTAMISGHVQDGQSEEALKIFSEMQAANNVKPNEGTFVSVLGACSNLAVQFLQWICSETPSPRLYLEQHTGKAMAMTWHMAFWIANMVWVALSDCVSSCLAIADEVAGSIR Homology
BLAST of Cp4.1LG03g08670 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.4e-59 Identity = 104/173 (60.12%), Postives = 139/173 (80.35%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.6e-41 Identity = 81/177 (45.76%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy Swiss-Prot
Match: P0C7R0 (Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E56 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 8.1e-39 Identity = 78/177 (44.07%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2) HSP 1 Score: 151.0 bits (380), Expect = 2.4e-35 Identity = 68/167 (40.72%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy Swiss-Prot
Match: Q9FHR3 (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E37 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.2e-35 Identity = 97/294 (32.99%), Postives = 163/294 (55.44%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. NCBI nr
Match: KAG7017650.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387 bits (995), Expect = 6.98e-127 Identity = 222/355 (62.54%), Postives = 223/355 (62.82%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. NCBI nr
Match: KAG6580894.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 385 bits (989), Expect = 5.73e-126 Identity = 219/344 (63.66%), Postives = 219/344 (63.66%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. NCBI nr
Match: XP_023527853.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382 bits (981), Expect = 9.13e-125 Identity = 216/339 (63.72%), Postives = 216/339 (63.72%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. NCBI nr
Match: XP_022935077.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita moschata]) HSP 1 Score: 379 bits (974), Expect = 1.03e-123 Identity = 214/339 (63.13%), Postives = 215/339 (63.42%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. NCBI nr
Match: XP_022983729.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita maxima]) HSP 1 Score: 370 bits (949), Expect = 5.84e-120 Identity = 211/339 (62.24%), Postives = 213/339 (62.83%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy TrEMBL
Match: A0A6J1F4K7 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111442054 PE=4 SV=1) HSP 1 Score: 379 bits (974), Expect = 4.98e-124 Identity = 214/339 (63.13%), Postives = 215/339 (63.42%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy TrEMBL
Match: A0A6J1J8B4 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482256 PE=4 SV=1) HSP 1 Score: 370 bits (949), Expect = 2.83e-120 Identity = 211/339 (62.24%), Postives = 213/339 (62.83%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy TrEMBL
Match: A0A6J1DWF0 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025012 PE=4 SV=1) HSP 1 Score: 322 bits (825), Expect = 1.01e-101 Identity = 186/340 (54.71%), Postives = 199/340 (58.53%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy TrEMBL
Match: A0A5A7UH59 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006890 PE=4 SV=1) HSP 1 Score: 322 bits (824), Expect = 1.45e-101 Identity = 186/340 (54.71%), Postives = 201/340 (59.12%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. ExPASy TrEMBL
Match: A0A1S3B8F2 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486904 PE=4 SV=1) HSP 1 Score: 322 bits (824), Expect = 1.45e-101 Identity = 186/340 (54.71%), Postives = 201/340 (59.12%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 231.5 bits (589), Expect = 1.0e-60 Identity = 104/173 (60.12%), Postives = 139/173 (80.35%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 169.1 bits (427), Expect = 6.1e-42 Identity = 81/177 (45.76%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. TAIR 10
Match: AT1G32415.1 (pentatricopeptide (PPR) repeat-containing protein ) HSP 1 Score: 162.5 bits (410), Expect = 5.7e-40 Identity = 78/177 (44.07%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-36 Identity = 68/167 (40.72%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of Cp4.1LG03g08670 vs. TAIR 10
Match: AT5G37570.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 150.2 bits (378), Expect = 2.9e-36 Identity = 97/294 (32.99%), Postives = 163/294 (55.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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