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Cp4.1LG03g08580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAAGAATCTTGGAATTTGTCAAGGACAATATGGTCCCATTTTAAAATCTTGTGGCCAAGCTTGTTTTTATTTATTTATTTATTTTTTTGTCTTTAAATAAATTGTTTACCTAATAACATGACTAAAAAATGTCCCTTTTGAGTAGAAAAGTCAAATTTATAATTTTTTTTAATAATAAAATCAATCATTAAACTAACTTAATTAAAATATTACAAATATTTTACATGATAATTGGTAGTGGTACCGTTTATTAAATCGTGGTAATAACGTTAATGTTGAAGGGCAAATTGGGAAACTCCGCATAACAAGGATCGTCATTTCCTTCTTTAGCAGGCGTCTTATTTAAGCCACTCGGAAAACCTCTGAAACACTTTCCATTTCGCAGCCGAACGAATCGCGATACGAAGAAGAGAGCTCTGTTGAAGCTTGCACTCTAATGAAGCTCGACAATGGCGCTAATTTCCGCTAGAACCAAGATTTCCAGGATCCTCTCTACTCTCTCTCATAACAATTTCCTTTCTAGGTCTCCGTTTTTCTCCAATGGAGTCCAGCCGGTTGATCGTCTCCACCCGCTGGGAGGGTTCGGGCGTTCATTTGCATCCTCTGCTGTCGCTTCCGTGGAGCACGACGCCCTAGGTTCCAGAGCTATGGGATTTGAAATCTTGGGTGTTAAGGATTACGAGGACTATCGCAGGTCTCTCTATGGCGAAATCACTCACAAGGCTTTGCTTGTTGATGCTGTTGGCACTCTTGTTGTTCCTTCTCAGCCCATGGCTCAGGTCTCCCTCTCTCTCTCTCGAATTTCGTTTTCAATTTCTGTGTTGCAGTTTGTTAAATGTTTCCGATATGTTTTGTGGATTTTGTTACAGATATATAGGGAAATAGGTGAGAAGTATGGTGTGAACTACTCGGAAGGGGAGATTCTTAATCGATACAGAAGGGCTTACGAGAAGCCTTGGGGAGGATCTCGTCTCAGGTCCACTTTTCTCATTCGATTCTCTGGGTTTTTCTTTTGGACTGTCTTCGAATTTCAGTTTACTATGACTAATTTTGTATTTATTATCCTTAATCTTGTCTGGATGGATCTCGTAGACCTTATGTTCTGTGAAAGAAAAGTCTCTTGCATCTCTCCACACTGTCTAAAAGACCATTTAATGGTTGACTACATCAACTCGAAAGTATAATTAAGAAGCATTTATATTGTTTGTTAGGTGAATAACTGTTCATTGAAGTGCATGTGCCATTTGGGTTTATAGTTCAGAAGAAAATTATTTGGCCTAATCGGGGTAATTTCAAGGAAATTATTGTGTATTTAATGATTTTTTTGGCACAATTAGGTCACTGGCCATTATAATTCTAGCTTTATGCTTGTGGCCACCCAGTAGATTAGCCAGTTTTGTAAAGTGCTTTTGTCAGAATTAAGTGGACTTGAACCTTTAAATTTTAATCAGAATTGATTGTCATGGCCTCTGTTTTCTTGGTCAATCCAAATATTAAATTGGTCTAAATATCTTTACTAATTGTAAATCAGCCTAAAAACTACCACCTCTTTTCTTCTGTTCTTTTTTATTGGAGCAATTGCTTGCTCGTTAATGATCTAGTGAGATCTTGGTTTACTATGAGCATAACATCAAAGATTTTGTTTTGTCCTGGGGAAATGATTCTAAACATGTTTCCTTTATTCATTTGTTGATTTTTGAGGACTGTCTTGTATGACAGATCCAGAGACAGCGAAAGTTTTTTTTAATTCTTCTTCAATTCCATTATAATTAATGGCGTGATGAAAGTAACTGTTTTGATGGAACTTTGCAGATATGTGAGTGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACGGGCTGTTCAGATTCTCAGTACTTTGAAGAACTCTACAATTACTATACGACTAATAAGGTTAAAATTTTTGGCAGCCGCTTTTTCCTCTGGCATTTCTACTGTTTGGGATGATTTTGTTCTTATTGTTATGATCTTTTGTGCTGATTTTGCAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAGAGTCTTTAAAGCTCTTAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGGTTAAGGCCTCTTTTGCGGGCTTTGAAATGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTGAGTTATTAACCCCTTTTCATTGGTTCTATTGAGATTTCGTTTATATGTTTTTGCTCCTTGCTCTTCCTTCTTTTTCATGTGTATTTCATGAGCCAGGTTTAATAGCCTCTGTATTCACCATTGTCATAGCTACTACTTGGACATGACTTGGTTACAAACTTCTTTATTTTCACATGTACATATGAAATTACATCAGTTGTTCTTCCTAACAGGTTGAAGCTGAGAAGCCGAATCCGACTATATTCCTAAAAGCCTGTGAATTGTTGGGAGTGAGACCTGAGGAAGCCTTACATGTTGGGGATGATCGTAGAAATGACGTATGGGGCGCAAGAGATGCCGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTATGATCCAAATTAATTACTGTAGAAGGAAATAACCTACCATATGATGTAGTTTGCTTTCATTGATCTGTCTTCAATATTAATGTCCAAGTTAATTGACTTACTGCCTTTCTCCATGGCTTGTATTGATATTCTAATATCATTCTCGTCGTCGTCGTCAAGGGCTTCTTGTATTGACATTCTGGCTCTTCTTTTTGTTCTTTCTTTGGTGATGCAGGTTGCAGAGAGGATAGGAGTGAAAGTGTGAAGGGGATTTTGAACTTGTTGGGTTTTCATGGAAGGTCTCTGAATGTACAGGTTTTAGCCGAGAGCGCAGGTGTTTGTATATACTGTGTGGCGTGTTTAGTTTGTAGTTTGTAGTTCGTAGTTTGTAGTTTGTACCAAGCACACTTACTCGACATTGTCGCTTAAGTGTGAACGATCTTTATGATGTATGCATTGAACTGTTTGGACTGAAAAGGCTTCCACATCCTTCTCTTTTCTATGCTTATTCACTATATCAGTACCATTATTTGCTTGGAGTTTCAATTTTGGGATATTTCATTTTCT ATAAAAGAATCTTGGAATTTGTCAAGGACAATATGGTCCCATTTTAAAATCTTGTGGCCAAGCTTGTTTTTATTTATTTATTTATTTTTTTGTCTTTAAATAAATTGTTTACCTAATAACATGACTAAAAAATGTCCCTTTTGAGTAGAAAAGTCAAATTTATAATTTTTTTTAATAATAAAATCAATCATTAAACTAACTTAATTAAAATATTACAAATATTTTACATGATAATTGGTAGTGGTACCGTTTATTAAATCGTGGTAATAACGTTAATGTTGAAGGGCAAATTGGGAAACTCCGCATAACAAGGATCGTCATTTCCTTCTTTAGCAGGCGTCTTATTTAAGCCACTCGGAAAACCTCTGAAACACTTTCCATTTCGCAGCCGAACGAATCGCGATACGAAGAAGAGAGCTCTGTTGAAGCTTGCACTCTAATGAAGCTCGACAATGGCGCTAATTTCCGCTAGAACCAAGATTTCCAGGATCCTCTCTACTCTCTCTCATAACAATTTCCTTTCTAGGTCTCCGTTTTTCTCCAATGGAGTCCAGCCGGTTGATCGTCTCCACCCGCTGGGAGGGTTCGGGCGTTCATTTGCATCCTCTGCTGTCGCTTCCGTGGAGCACGACGCCCTAGGTTCCAGAGCTATGGGATTTGAAATCTTGGGTGTTAAGGATTACGAGGACTATCGCAGGTCTCTCTATGGCGAAATCACTCACAAGGCTTTGCTTGTTGATGCTGTTGGCACTCTTGTTGTTCCTTCTCAGCCCATGGCTCAGATATATAGGGAAATAGGTGAGAAGTATGGTGTGAACTACTCGGAAGGGGAGATTCTTAATCGATACAGAAGGGCTTACGAGAAGCCTTGGGGAGGATCTCGTCTCAGATATGTGAGTGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACGGGCTGTTCAGATTCTCAGTACTTTGAAGAACTCTACAATTACTATACGACTAATAAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAGAGTCTTTAAAGCTCTTAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGGTTAAGGCCTCTTTTGCGGGCTTTGAAATGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTTGAAGCTGAGAAGCCGAATCCGACTATATTCCTAAAAGCCTGTGAATTGTTGGGAGTGAGACCTGAGGAAGCCTTACATGTTGGGGATGATCGTAGAAATGACGTATGGGGCGCAAGAGATGCCGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTTGCAGAGAGGATAGGAGTGAAAGTGTGAAGGGGATTTTGAACTTGTTGGGTTTTCATGGAAGGTCTCTGAATGTACAGGTTTTAGCCGAGAGCGCAGGTGTTTGTATATACTGTGTGGCGTGTTTAGTTTGTAGTTTGTAGTTCGTAGTTTGTAGTTTGTACCAAGCACACTTACTCGACATTGTCGCTTAAGTGTGAACGATCTTTATGATGTATGCATTGAACTGTTTGGACTGAAAAGGCTTCCACATCCTTCTCTTTTCTATGCTTATTCACTATATCAGTACCATTATTTGCTTGGAGTTTCAATTTTGGGATATTTCATTTTCT ATGGCGCTAATTTCCGCTAGAACCAAGATTTCCAGGATCCTCTCTACTCTCTCTCATAACAATTTCCTTTCTAGGTCTCCGTTTTTCTCCAATGGAGTCCAGCCGGTTGATCGTCTCCACCCGCTGGGAGGGTTCGGGCGTTCATTTGCATCCTCTGCTGTCGCTTCCGTGGAGCACGACGCCCTAGGTTCCAGAGCTATGGGATTTGAAATCTTGGGTGTTAAGGATTACGAGGACTATCGCAGGTCTCTCTATGGCGAAATCACTCACAAGGCTTTGCTTGTTGATGCTGTTGGCACTCTTGTTGTTCCTTCTCAGCCCATGGCTCAGATATATAGGGAAATAGGTGAGAAGTATGGTGTGAACTACTCGGAAGGGGAGATTCTTAATCGATACAGAAGGGCTTACGAGAAGCCTTGGGGAGGATCTCGTCTCAGATATGTGAGTGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACGGGCTGTTCAGATTCTCAGTACTTTGAAGAACTCTACAATTACTATACGACTAATAAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAGAGTCTTTAAAGCTCTTAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGGTTAAGGCCTCTTTTGCGGGCTTTGAAATGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTTGAAGCTGAGAAGCCGAATCCGACTATATTCCTAAAAGCCTGTGAATTGTTGGGAGTGAGACCTGAGGAAGCCTTACATGTTGGGGATGATCGTAGAAATGACGTATGGGGCGCAAGAGATGCCGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTTGCAGAGAGGATAGGAGTGAAAGTGTGA MALISARTKISRILSTLSHNNFLSRSPFFSNGVQPVDRLHPLGGFGRSFASSAVASVEHDALGSRAMGFEILGVKDYEDYRRSLYGEITHKALLVDAVGTLVVPSQPMAQIYREIGEKYGVNYSEGEILNRYRRAYEKPWGGSRLRYVSDGKPFWQYIVSSSTGCSDSQYFEELYNYYTTNKAWHLCDPDAERVFKALRQAGVKIAIVSNFDTRLRPLLRALKCDHWFDAVAVSAEVEAEKPNPTIFLKACELLGVRPEEALHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAERIGVKV Homology
BLAST of Cp4.1LG03g08580 vs. ExPASy Swiss-Prot
Match: Q94915 (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster OX=7227 GN=Reg-2 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16 Identity = 60/208 (28.85%), Postives = 98/208 (47.12%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy Swiss-Prot
Match: Q5HZL9 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16 Identity = 60/199 (30.15%), Postives = 92/199 (46.23%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy Swiss-Prot
Match: Q9CYW4 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus OX=10090 GN=Hdhd3 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.3e-15 Identity = 59/204 (28.92%), Postives = 95/204 (46.57%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy Swiss-Prot
Match: O14262 (Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC7D4.05 PE=3 SV=3) HSP 1 Score: 82.4 bits (202), Expect = 9.6e-15 Identity = 59/197 (29.95%), Postives = 100/197 (50.76%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy Swiss-Prot
Match: Q5E9D6 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus OX=9913 GN=HDHD3 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.2e-14 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. NCBI nr
Match: XP_023529003.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 623 bits (1607), Expect = 1.95e-225 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. NCBI nr
Match: XP_022935563.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita moschata] >KAG6580886.1 Rhythmically expressed gene 2 protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017644.1 Rhythmically expressed gene 2 protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 620 bits (1600), Expect = 2.27e-224 Identity = 301/303 (99.34%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. NCBI nr
Match: XP_022983839.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita maxima]) HSP 1 Score: 619 bits (1597), Expect = 6.51e-224 Identity = 300/303 (99.01%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. NCBI nr
Match: XP_038905682.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida]) HSP 1 Score: 570 bits (1470), Expect = 1.49e-204 Identity = 277/303 (91.42%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. NCBI nr
Match: XP_008443269.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo] >KAA0053875.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo var. makuwa] >TYK25529.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 570 bits (1469), Expect = 2.12e-204 Identity = 277/303 (91.42%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy TrEMBL
Match: A0A6J1FAW1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111442399 PE=4 SV=1) HSP 1 Score: 620 bits (1600), Expect = 1.10e-224 Identity = 301/303 (99.34%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy TrEMBL
Match: A0A6J1J8M8 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111482334 PE=4 SV=1) HSP 1 Score: 619 bits (1597), Expect = 3.15e-224 Identity = 300/303 (99.01%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy TrEMBL
Match: A0A5D3DQC8 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006810 PE=4 SV=1) HSP 1 Score: 570 bits (1469), Expect = 1.03e-204 Identity = 277/303 (91.42%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy TrEMBL
Match: A0A1S3B7N8 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo OX=3656 GN=LOC103486892 PE=4 SV=1) HSP 1 Score: 570 bits (1469), Expect = 1.03e-204 Identity = 277/303 (91.42%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. ExPASy TrEMBL
Match: A0A0A0LCE6 (N-acylneuraminate-9-phosphatase OS=Cucumis sativus OX=3659 GN=Csa_3G821560 PE=4 SV=1) HSP 1 Score: 566 bits (1458), Expect = 4.88e-203 Identity = 277/303 (91.42%), Postives = 283/303 (93.40%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. TAIR 10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-118 Identity = 203/280 (72.50%), Postives = 236/280 (84.29%), Query Frame = 0
BLAST of Cp4.1LG03g08580 vs. TAIR 10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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