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Cp4.1LG03g08450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGACTTTAGTAAAAGGCAATAAACCAGAGTGGTTTTTTCTGACCTTTTTGTTTGGTTTGTTTATATAAATGTTCTCCCACATCGGTTTTCTTGCCAAACTGCTACCTATCCATCCCTTTATATACAGAGATCTTTTCTGTTTGTTTCCCGAGAAAACATGGGTCAGAAAATTTTCCTCTCCCTCCGGCGGCTGCTGCTTCTCTTTCTCGGCTTCTCCCTTCTCCTTTCCTCTGTTGCTGTTCCCACCACAAGTAAGTAAACCCTTTCTCTCTCATAATTCACTCCAATTTTCATCTTTCTCTCTCCTTTTTTTTTTTTAATGAATTTGTGGTTTTTTTTAGGGATTTTCAAATCGACTTTCGATCAGCCATCTGCGCAAGATTTTGTTTTTCAGGTTTTTTTTTTTCTCGAGAAAGTTATTTACTTTTCTGGGAAATTTTCTCGGCAACCAAACAGGTATGATTGAGAAATTGAATTGTGTTTTGATCTATAATTTTTGTAGGATGTGAGAGATTTGGAGTTCAACGGTGGAGATTTATTTGGAAGATTGGTTTTGGAGAACAATGATTATCCCGGCACCGGAGCAAACAACCACCACGATCCAAACACTCCGGCGAAGCCATAACTTTATTTATTTATTTTCTTAACCAAAAATTAGAAGTAAAAGGGTTAGTATTTGAAGAAATGCTCACTTTTTTTTAATAGATATAAACTTGGGTAAATTATAAAAAAGAAAGGGCAATTCTGTCTTTTCACTCCGATGCTTTTAGTCTACTAATAACAGTATTTGATTGGACTTTTTTCCTTTTGTAATATATTATAAGTTTATTGGTTTAATTATTGTCTATCCTATTTATTTATTATTATTATTAATT GTTGACTTTAGTAAAAGGCAATAAACCAGAGTGGTTTTTTCTGACCTTTTTGTTTGGTTTGTTTATATAAATGTTCTCCCACATCGGTTTTCTTGCCAAACTGCTACCTATCCATCCCTTTATATACAGAGATCTTTTCTGTTTGTTTCCCGAGAAAACATGGGTCAGAAAATTTTCCTCTCCCTCCGGCGGCTGCTGCTTCTCTTTCTCGGCTTCTCCCTTCTCCTTTCCTCTGTTGCTGTTCCCACCACAAGGATTTTCAAATCGACTTTCGATCAGCCATCTGCGCAAGATTTTGTTTTTCAGGATGTGAGAGATTTGGAGTTCAACGGTGGAGATTTATTTGGAAGATTGGTTTTGGAGAACAATGATTATCCCGGCACCGGAGCAAACAACCACCACGATCCAAACACTCCGGCGAAGCCATAACTTTATTTATTTATTTTCTTAACCAAAAATTAGAAGTAAAAGGGTTAGTATTTGAAGAAATGCTCACTTTTTTTTAATAGATATAAACTTGGGTAAATTATAAAAAAGAAAGGGCAATTCTGTCTTTTCACTCCGATGCTTTTAGTCTACTAATAACAGTATTTGATTGGACTTTTTTCCTTTTGTAATATATTATAAGTTTATTGGTTTAATTATTGTCTATCCTATTTATTTATTATTATTATTAATT ATGGGTCAGAAAATTTTCCTCTCCCTCCGGCGGCTGCTGCTTCTCTTTCTCGGCTTCTCCCTTCTCCTTTCCTCTGTTGCTGTTCCCACCACAAGGATTTTCAAATCGACTTTCGATCAGCCATCTGCGCAAGATTTTGTTTTTCAGGATGTGAGAGATTTGGAGTTCAACGGTGGAGATTTATTTGGAAGATTGGTTTTGGAGAACAATGATTATCCCGGCACCGGAGCAAACAACCACCACGATCCAAACACTCCGGCGAAGCCATAA MGQKIFLSLRRLLLLFLGFSLLLSSVAVPTTRIFKSTFDQPSAQDFVFQDVRDLEFNGGDLFGRLVLENNDYPGTGANNHHDPNTPAKP Homology
BLAST of Cp4.1LG03g08450 vs. NCBI nr
Match: KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174 bits (441), Expect = 1.08e-54 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. NCBI nr
Match: KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171 bits (433), Expect = 1.80e-53 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. NCBI nr
Match: KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus]) HSP 1 Score: 113 bits (283), Expect = 1.52e-30 Identity = 65/97 (67.01%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. NCBI nr
Match: KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (262), Expect = 2.47e-27 Identity = 63/98 (64.29%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. NCBI nr
Match: KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105 bits (261), Expect = 3.93e-27 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. ExPASy TrEMBL
Match: A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1) HSP 1 Score: 113 bits (283), Expect = 7.35e-31 Identity = 65/97 (67.01%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. ExPASy TrEMBL
Match: A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 1.19e-27 Identity = 63/98 (64.29%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. ExPASy TrEMBL
Match: A0A6A6KJS2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004666 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 9.63e-23 Identity = 56/97 (57.73%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. ExPASy TrEMBL
Match: B9SI56 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1320880 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.40e-20 Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Cp4.1LG03g08450 vs. ExPASy TrEMBL
Match: A0A5J4ZL62 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015769 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.97e-20 Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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