Cp4.1LG03g08050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA MTKQLKENQEPFISGTGEDEFPSAEAESMRSICNPCDFHSSKTCKEVETDQESIGSSEETESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS Homology
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: XP_022934173.1 (uncharacterized protein LOC111441419 [Cucurbita moschata]) HSP 1 Score: 316 bits (809), Expect = 1.32e-108 Identity = 154/158 (97.47%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: KAG7017711.1 (hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 315 bits (808), Expect = 1.87e-108 Identity = 153/158 (96.84%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: XP_008443420.1 (PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 uncharacterized protein E6C27_scaffold135G001310 [Cucumis melo var. makuwa] >TYK25651.1 uncharacterized protein E5676_scaffold352G008140 [Cucumis melo var. makuwa]) HSP 1 Score: 257 bits (657), Expect = 2.18e-85 Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: KAE8651222.1 (hypothetical protein Csa_001107 [Cucumis sativus]) HSP 1 Score: 255 bits (651), Expect = 1.85e-84 Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: XP_011652239.2 (uncharacterized protein LOC105435002 [Cucumis sativus]) HSP 1 Score: 255 bits (651), Expect = 3.90e-84 Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. ExPASy TrEMBL
Match: A0A6J1F6X8 (uncharacterized protein LOC111441419 OS=Cucurbita moschata OX=3662 GN=LOC111441419 PE=4 SV=1) HSP 1 Score: 316 bits (809), Expect = 6.38e-109 Identity = 154/158 (97.47%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. ExPASy TrEMBL
Match: A0A5D3DPQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008140 PE=4 SV=1) HSP 1 Score: 257 bits (657), Expect = 1.06e-85 Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. ExPASy TrEMBL
Match: A0A1S3B7Y8 (uncharacterized protein LOC103487011 OS=Cucumis melo OX=3656 GN=LOC103487011 PE=4 SV=1) HSP 1 Score: 257 bits (657), Expect = 1.06e-85 Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. ExPASy TrEMBL
Match: A0A0A0LFA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827220 PE=4 SV=1) HSP 1 Score: 255 bits (651), Expect = 1.89e-84 Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. ExPASy TrEMBL
Match: A0A7J7FYU6 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_029700 PE=4 SV=1) HSP 1 Score: 118 bits (295), Expect = 7.45e-31 Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. TAIR 10
Match: AT5G15190.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05 Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of Cp4.1LG03g08050 vs. TAIR 10
Match: AT5G15190.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05 Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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