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Cp4.1LG03g06750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTGCAACAAAGAGGATAGAGACCCACCACGTTCAGTAAACAAAGGCAGACAGCCGATTCGCTCATCATTCATATCGTCTTCTTCTTCCTCATCTCCATTTTTCTCCATTTCCGAAGAATTATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGTGAGATCCGCTTCTTCTTCTTCTTCTGATTCTGATTTTCCATTTTCATTTCATCTCATTTTTTTCTTCTCTTCCATAGGGTACCGTCCGCCGCAGCCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGTTATTTCTACGATGGATATTCTCCATCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGGTACGTTTTCCTCCATTTCTTCGATTCTTGTTGACACGATTTTGATTTGTTTGCTTGTCTTCGTGATCTCGTTGATTGATTGATCGATTGATTCTGTGTTGTGAAAATTGATTGTTCTTGTGCAATGAATGTTTTGTCGATTTATTTGGATTTGGAAATCAGGAATTCAATTTGGATTTGGATTTTCAATGAATGTTATGATCAAGCTGTTTAAACATCGAAGGCGTTTCTTGATCTTCTTTCAATTTGAATTACATTTTAAAAATCTTGCTCAATGTAGAATTGTCAGCCACATTGTTCCATCCGTCTCGAACAATTTCATCTCGCAATAGTCTCGAGTCTGCTTGATAATTATTTGGTTAAAATCGTGCTTATTTAAATAAACATTTGAGTTCTCAAAACTTGACTTAGAATTTTGAAAACACTCGATACAAGGAGCTATCTCGAACCAATAACAATCATCTTTGTTCTTGTTATCATGAACTAAGCAGAATTTTTCAATTGGTGCACAGATAATCTGATGCTTCCCCATTAATGCTACCTTATGATCCAATCCTTTCTTCCTCTAATTATGTTATATAGCTTTGGTTAAACTGTTGAATTGGACTGTCTCTTTTCATGTTTTGCTCTGTTTTTTTCTCATCCATGTTCGTCGCTGTTTTAACGTTCTTGTGCGTGAGATAGCGAAACAAGCTCGATCTCGTTCGACATGTTGTTTTCTTGTTTGATCCCTTTTCTTATTGGGGACTTGCCTTCTTGCAATTGGTTATGTTTTAGCATTTACCTAAGCTTATGCCATTTTCCTCCTATGGATGCTGAAAGATTAGGGTCGAACGAGTACGTAAACTAGTAATCTTGGACACCAGAGAAATCGAATGTCGAATGTCTAAGACGTGTGGAATAACCGTGGCCACAAGTACATCATAAGATCCTTCCTGGGGCTTCTTTTAGCTTTTAGTACCAAATATGGATTCAAGGGAGAATATCTTTTGATTATGAGTGTAACCTTAAACTTGTTGTCTTGTGCAGCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAGACCGTGTGTTTTTTTCGGTCTCTTCGGCCGAGCTGTGTTCATGTCTCTTCGGCCGAGCTGTGTTTCGCATCACTTGGAATAAGAATTGCAGTTTCTGGTTTGTGTGATCGTAAACTATCTGTATTGTTTGTGATATCTAAATGCTGTTATTTACTTATATATATATATATATATACCTGAACAAATAATTGTTAATACTTGTAGACTTGGAATCCTTATTTATTGTTGTCATCCAGATTCAACTTTCTTTGAGATTTTTATGCTAAGTTTCTGTGGAGAATATGCTATTTGGAACTTGGTTTAATCCTCCATCCTTTTTTTAATTTTATTTTTGTTCCTTTTTTGGTATCCAAAGAACCTAGACGATAAATGGGAATGTGAGGTTGCATCGGAAGAATCTCGGCC AGTTGCAACAAAGAGGATAGAGACCCACCACGTTCAGTAAACAAAGGCAGACAGCCGATTCGCTCATCATTCATATCGTCTTCTTCTTCCTCATCTCCATTTTTCTCCATTTCCGAAGAATTATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGGTACCGTCCGCCGCAGCCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGTTATTTCTACGATGGATATTCTCCATCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGCATTTACCTAAGCTTATGCCATTTTCCTCCTATGGATGCTGAAAGATTAGGGTCGAACGAGTACCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAGACCGTGTGTTTTTTTCGGTCTCTTCGGCCGAGCTGTGTTCATGTCTCTTCGGCCGAGCTGTGTTTCGCATCACTTGGAATAAGAATTGCAGTTTCTGGTTTGTGTGATCGTAAACTATCTGTATTGTTTGTGATATCTAAATGCTGTTATTTACTTATATATATATATATATATACCTGAACAAATAATTGTTAATACTTGTAGACTTGGAATCCTTATTTATTGTTGTCATCCAGATTCAACTTTCTTTGAGATTTTTATGCTAAGTTTCTGTGGAGAATATGCTATTTGGAACTTGGTTTAATCCTCCATCCTTTTTTTAATTTTATTTTTGTTCCTTTTTTGGTATCCAAAGAACCTAGACGATAAATGGGAATGTGAGGTTGCATCGGAAGAATCTCGGCC ATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGGTACCGTCCGCCGCAGCCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGTTATTTCTACGATGGATATTCTCCATCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGCATTTACCTAAGCTTATGCCATTTTCCTCCTATGGATGCTGAAAGATTAGGGTCGAACGAGTACCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAGACCGTGTGTTTTTTTCGGTCTCTTCGGCCGAGCTGTGTTCATGTCTCTTCGGCCGAGCTGTGTTTCGCATCACTTGGAATAAGAATTGCAGTTTCTGGTTTGTGTGA MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPPGPPPPPYCHQHYHYDDRNDCSSFLHGCIYLSLCHFPPMDAERLGSNEYLSYTVLLLYVGGVFGLLPIDRVFFSVSSAELCSCLFGRAVFRITWNKNCSFWFV Homology
BLAST of Cp4.1LG03g06750 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194 bits (493), Expect = 3.91e-61 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (479), Expect = 5.83e-59 Identity = 88/96 (91.67%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169 bits (429), Expect = 6.33e-51 Identity = 97/159 (61.01%), Postives = 104/159 (65.41%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. NCBI nr
Match: XP_008450006.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]) HSP 1 Score: 162 bits (409), Expect = 2.11e-48 Identity = 77/93 (82.80%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. NCBI nr
Match: XP_038879833.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]) HSP 1 Score: 159 bits (403), Expect = 1.67e-47 Identity = 76/93 (81.72%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1) HSP 1 Score: 194 bits (493), Expect = 1.89e-61 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1) HSP 1 Score: 194 bits (493), Expect = 1.89e-61 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. ExPASy TrEMBL
Match: A0A1S3BP97 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103491722 PE=4 SV=1) HSP 1 Score: 162 bits (409), Expect = 1.02e-48 Identity = 77/93 (82.80%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. ExPASy TrEMBL
Match: A0A5A7VHS2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00060 PE=4 SV=1) HSP 1 Score: 156 bits (395), Expect = 3.39e-46 Identity = 75/86 (87.21%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. ExPASy TrEMBL
Match: A0A0A0L8F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597340 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 8.17e-46 Identity = 76/94 (80.85%), Postives = 79/94 (84.04%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein ) HSP 1 Score: 54.7 bits (130), Expect = 8.1e-08 Identity = 49/119 (41.18%), Postives = 58/119 (48.74%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein ) HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07 Identity = 48/113 (42.48%), Postives = 56/113 (49.56%), Query Frame = 0
BLAST of Cp4.1LG03g06750 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 4.2e-04 Identity = 45/104 (43.27%), Postives = 51/104 (49.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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