Cp4.1LG03g05680 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g05680
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat
LocationCp4.1LG03: 4620193 .. 4621647 (+)
RNA-Seq ExpressionCp4.1LG03g05680
SyntenyCp4.1LG03g05680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTTCCTCTGCGCCCATCAAATGTTCGAAGAATCACAATCGATTGTCCGATTTCTCGTCTCCCGCAAAGGTAAGGACTCGGCGGCTTCGATCTTCGCCGCGATTCTTGAAATTACAGATACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCTGGGTTCATATCCGATGCGATTCAGTGCTTTAGGTTGGTCAGGAAGAGAAATTTTCAAATCCCGTTTCGTGGATGTGAGTACTTACTTGATAAAATGATGAATTCAAACTCCCCTGTTACGATTTGGACGTTTTATCTGGAAATTTTGGATTCTGGATTCCCACCTAAAGTAAAGTATTTCAACATTTTGATTAATAAGTTCTGTAAACAGGGAAGCATTAGAGATGCCAGGTTGATCTTCGATGAAATTGGGAAGAGGGGTTTTCGTCCCACAGCTGTTAGTTTCAATACCTTGATTAATGGTTTCTGTAAATCCCGAAATTTAGATGAGTGTTTTAGGTTGAAGAAAGTCATGGAAGAGAGTAGAATATATCCTGATGTTTACACTTACAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAAGGTAGATGATGCAGAACAACTGTTCGATGAAATGCGTCAGAGAGGATTGAGGGCAAACGACGTTACATTCACTGCTTTGATTGATGGGCAATGCAGGAGCGGACGAATTGACTCAGCCATGAACACTTATCAGCAAATGTTAGCCATGGGAGTGAAACCAGATTTAGTTATGTATAACACACTCTTGAATGGCCTTTGCAAAGTGGGGGATGTTAGTAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCAGATAAAATCACTTACACAACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGTATGAATGAAGAAGGGGTTGTTCTTGATAATGTAGCATTCACAGCCATTATTTCAGGTTTGTGTAGAGATGGAAGGGTGATGGATGCAGAGAGGACGTTGAGGGAGATGAAGGAAGCTGGGATGAAACCCGACGACGCGACGTATACTATGGTGATCGACGGGTATTGCAAGAACGGCGATGTTAAGACAGGGTTTAAGCTGCTGAAAGAGATGCAGAGAAATGGCCATAATCCTGGTGTGATAACTTACAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCCAATATGCTGTTGGAAGCAATGCTTAACTTAGGAGTAACTCCTGATGACATTACATACAATATTCTGTTGGAAGGGCACTGTAAGAGTGGAAGAGCTGAAGATTTCCTTCACCTCAGAAATGAGAAGGGGGTCGTAGTAGACTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCGTTAAAGGATCGTCGAAAGAGGTGA

mRNA sequence

ATGGCTAATTTCCTCTGCGCCCATCAAATGTTCGAAGAATCACAATCGATTGTCCGATTTCTCGTCTCCCGCAAAGGTAAGGACTCGGCGGCTTCGATCTTCGCCGCGATTCTTGAAATTACAGATACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCTGGGTTCATATCCGATGCGATTCAGTGCTTTAGGTTGGTCAGGAAGAGAAATTTTCAAATCCCGTTTCGTGGATGTGAGTACTTACTTGATAAAATGATGAATTCAAACTCCCCTGTTACGATTTGGACGTTTTATCTGGAAATTTTGGATTCTGGATTCCCACCTAAAGTAAAGTATTTCAACATTTTGATTAATAAGTTCTGTAAACAGGGAAGCATTAGAGATGCCAGGTTGATCTTCGATGAAATTGGGAAGAGGGGTTTTCGTCCCACAGCTGTTAGTTTCAATACCTTGATTAATGGTTTCTGTAAATCCCGAAATTTAGATGAGTGTTTTAGGTTGAAGAAAGTCATGGAAGAGAGTAGAATATATCCTGATGTTTACACTTACAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAAGGTAGATGATGCAGAACAACTGTTCGATGAAATGCGTCAGAGAGGATTGAGGGCAAACGACGTTACATTCACTGCTTTGATTGATGGGCAATGCAGGAGCGGACGAATTGACTCAGCCATGAACACTTATCAGCAAATGTTAGCCATGGGAGTGAAACCAGATTTAGTTATGTATAACACACTCTTGAATGGCCTTTGCAAAGTGGGGGATGTTAGTAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCAGATAAAATCACTTACACAACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGTATGAATGAAGAAGGGGTTGTTCTTGATAATGTAGCATTCACAGCCATTATTTCAGGTTTGTGTAGAGATGGAAGGGTGATGGATGCAGAGAGGACGTTGAGGGAGATGAAGGAAGCTGGGATGAAACCCGACGACGCGACGTATACTATGGTGATCGACGGGTATTGCAAGAACGGCGATGTTAAGACAGGGTTTAAGCTGCTGAAAGAGATGCAGAGAAATGGCCATAATCCTGGTGTGATAACTTACAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCCAATATGCTGTTGGAAGCAATGCTTAACTTAGGAGTAACTCCTGATGACATTACATACAATATTCTGTTGGAAGGGCACTGTAAGAGTGGAAGAGCTGAAGATTTCCTTCACCTCAGAAATGAGAAGGGGGTCGTAGTAGACTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCGTTAAAGGATCGTCGAAAGAGGTGA

Coding sequence (CDS)

ATGGCTAATTTCCTCTGCGCCCATCAAATGTTCGAAGAATCACAATCGATTGTCCGATTTCTCGTCTCCCGCAAAGGTAAGGACTCGGCGGCTTCGATCTTCGCCGCGATTCTTGAAATTACAGATACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCTGGGTTCATATCCGATGCGATTCAGTGCTTTAGGTTGGTCAGGAAGAGAAATTTTCAAATCCCGTTTCGTGGATGTGAGTACTTACTTGATAAAATGATGAATTCAAACTCCCCTGTTACGATTTGGACGTTTTATCTGGAAATTTTGGATTCTGGATTCCCACCTAAAGTAAAGTATTTCAACATTTTGATTAATAAGTTCTGTAAACAGGGAAGCATTAGAGATGCCAGGTTGATCTTCGATGAAATTGGGAAGAGGGGTTTTCGTCCCACAGCTGTTAGTTTCAATACCTTGATTAATGGTTTCTGTAAATCCCGAAATTTAGATGAGTGTTTTAGGTTGAAGAAAGTCATGGAAGAGAGTAGAATATATCCTGATGTTTACACTTACAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAAGGTAGATGATGCAGAACAACTGTTCGATGAAATGCGTCAGAGAGGATTGAGGGCAAACGACGTTACATTCACTGCTTTGATTGATGGGCAATGCAGGAGCGGACGAATTGACTCAGCCATGAACACTTATCAGCAAATGTTAGCCATGGGAGTGAAACCAGATTTAGTTATGTATAACACACTCTTGAATGGCCTTTGCAAAGTGGGGGATGTTAGTAAAGCTAGGAAGCTAGTTGATGAAATGAAAATGGTGGGGATGAAACCAGATAAAATCACTTACACAACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGTATGAATGAAGAAGGGGTTGTTCTTGATAATGTAGCATTCACAGCCATTATTTCAGGTTTGTGTAGAGATGGAAGGGTGATGGATGCAGAGAGGACGTTGAGGGAGATGAAGGAAGCTGGGATGAAACCCGACGACGCGACGTATACTATGGTGATCGACGGGTATTGCAAGAACGGCGATGTTAAGACAGGGTTTAAGCTGCTGAAAGAGATGCAGAGAAATGGCCATAATCCTGGTGTGATAACTTACAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCCAATATGCTGTTGGAAGCAATGCTTAACTTAGGAGTAACTCCTGATGACATTACATACAATATTCTGTTGGAAGGGCACTGTAAGAGTGGAAGAGCTGAAGATTTCCTTCACCTCAGAAATGAGAAGGGGGTCGTAGTAGACTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCGTTAAAGGATCGTCGAAAGAGGTGA

Protein sequence

MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKDRRKR
Homology
BLAST of Cp4.1LG03g05680 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.4e-172
Identity = 290/484 (59.92%), Postives = 367/484 (75.83%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           +A FL  H+MF E+QS++  +VSRKGK+SA+S+F +++E+  T    F+ DALMI Y+D 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDL 183

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFI DAIQCFRL RK  F +P RGC  LLD+MM  N   TIW FY+EILD+GFP  V  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NIL+NKFCK+G+I DA+ +FDEI KR  +PT VSFNTLING+CK  NLDE FRLK  ME+
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           SR  PDV+TYS LI+ LCKE K+D A  LFDEM +RGL  NDV FT LI G  R+G ID 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
              +YQ+ML+ G++PD+V+YNTL+NG CK GD+  AR +VD M   G++PDKITYTTLID
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           G+C+ GD+E+A+EIRK M++ G+ LD V F+A++ G+C++GRV+DAER LREM  AG+KP
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DD TYTM++D +CK GD +TGFKLLKEMQ +GH P V+TYNVL+NGLCK GQMKNA+MLL
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           +AMLN+GV PDDITYN LLEGH +   +      + E G+V D A Y S+V E D++ KD
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASKD 603

Query: 481 RRKR 485
            R R
Sbjct: 604 HRNR 607

BLAST of Cp4.1LG03g05680 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 8.5e-82
Identity = 157/488 (32.17%), Postives = 275/488 (56.35%), Query Frame = 0

Query: 3   NFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRC--SNFVFDALMIAYSDS 62
           + L   ++++ +Q +   + ++   D  AS+    L+ T   C  ++ VFD ++ +YS  
Sbjct: 88  HILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRL 147

Query: 63  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTI-WTFYLEILDSGFPPKVKY 122
             I  A+    L +   F         +LD  + S   ++     + E+L+S   P V  
Sbjct: 148 SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 207

Query: 123 FNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVME 182
           +NILI  FC  G+I  A  +FD++  +G  P  V++NTLI+G+CK R +D+ F+L + M 
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267

Query: 183 ESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRID 242
              + P++ +Y+V+I+GLC+EG++ +   +  EM +RG   ++VT+  LI G C+ G   
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 243 SAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLI 302
            A+  + +ML  G+ P ++ Y +L++ +CK G++++A + +D+M++ G+ P++ TYTTL+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387

Query: 303 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMK 362
           DG+ ++G +  A  + + MN+ G     V + A+I+G C  G++ DA   L +MKE G+ 
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 363 PDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANML 422
           PD  +Y+ V+ G+C++ DV    ++ +EM   G  P  ITY+ L+ G C+Q + K A  L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 423 LEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRN---EKGVVVDYAYYTSLVGEYDK 482
            E ML +G+ PD+ TY  L+  +C  G  E  L L N   EKGV+ D   Y+ L+   +K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 483 SLKDRRKR 485
             + R  +
Sbjct: 568 QSRTREAK 575

BLAST of Cp4.1LG03g05680 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 4.2e-73
Identity = 148/479 (30.90%), Postives = 254/479 (53.03%), Query Frame = 0

Query: 3   NFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSN-FVFDALMIAYSDSG 62
           + L   +M++ ++ I++ L    GK S   +F A++       SN  V+D L+  Y   G
Sbjct: 80  HILVRARMYDPARHILKELSLMSGKSS--FVFGALMTTYRLCNSNPSVYDILIRVYLREG 139

Query: 63  FISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFN 122
            I D+++ FRL+    F      C  +L  ++ S   V++W+F  E+L     P V  FN
Sbjct: 140 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 199

Query: 123 ILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEES 182
           ILIN  C +GS   +  +  ++ K G+ PT V++NT+++ +CK         L   M+  
Sbjct: 200 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 259

Query: 183 RIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSA 242
            +  DV TY++LIH LC+  ++     L  +MR+R +  N+VT+  LI+G    G++  A
Sbjct: 260 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 319

Query: 243 MNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDG 302
                +ML+ G+ P+ V +N L++G    G+  +A K+   M+  G+ P +++Y  L+DG
Sbjct: 320 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 379

Query: 303 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPD 362
            CK  + + A      M   GV +  + +T +I GLC++G + +A   L EM + G+ PD
Sbjct: 380 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 439

Query: 363 DATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLLE 422
             TY+ +I+G+CK G  KT  +++  + R G +P  I Y+ L+   C+ G +K A  + E
Sbjct: 440 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 499

Query: 423 AMLNLGVTPDDITYNILLEGHCKSGR---AEDFLHLRNEKGVVVDYAYYTSLVGEYDKS 478
           AM+  G T D  T+N+L+   CK+G+   AE+F+      G++ +   +  L+  Y  S
Sbjct: 500 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

BLAST of Cp4.1LG03g05680 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-72
Identity = 138/430 (32.09%), Postives = 237/430 (55.12%), Query Frame = 0

Query: 49  VFDALMIAYSDSGFISDAIQCFRLVRKRNFQIPFRGCE-YLLDKMMNSNSPVTIWTFYLE 108
           VFD       D G + +A + F  +      +    C  YL     +     T    + E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 109 ILDSGFPPKVKYFNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRN 168
             + G    V  +NI+I+  C+ G I++A  +   +  +G+ P  +S++T++NG+C+   
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 169 LDECFRLKKVMEESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTA 228
           LD+ ++L +VM+   + P+ Y Y  +I  LC+  K+ +AE+ F EM ++G+  + V +T 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 229 LIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVG 288
           LIDG C+ G I +A   + +M +  + PD++ Y  +++G C++GD+ +A KL  EM   G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 289 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAE 348
           ++PD +T+T LI+GYCK G ++ A  +   M + G   + V +T +I GLC++G +  A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 349 RTLREMKEAGMKPDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGL 408
             L EM + G++P+  TY  +++G CK+G+++   KL+ E +  G N   +TY  LM+  
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 409 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRN---EKGVVVDY 468
           CK G+M  A  +L+ ML  G+ P  +T+N+L+ G C  G  ED   L N    KG+  + 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 469 AYYTSLVGEY 475
             + SLV +Y
Sbjct: 597 TTFNSLVKQY 606

BLAST of Cp4.1LG03g05680 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.3e-68
Identity = 138/452 (30.53%), Postives = 248/452 (54.87%), Query Frame = 0

Query: 24  RKGKD-SAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCFRLVRKRNFQIPF 83
           R G D    SIF AI    +   ++ + D L++AY+++       + F+      +++  
Sbjct: 129 RNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSA 188

Query: 84  RGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNILINKFCKQGSIRDARLIFDE 143
             C+ L+  ++  N    +   Y E++     P V  FN++IN  CK G +  AR + ++
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248

Query: 144 IGKRGFRPTAVSFNTLINGFCKSRNLDECFR---LKKVMEESRIYPDVYTYSVLIHGLCK 203
           +   G  P  VS+NTLI+G+CK     + ++   + K M E+ + P++ T+++LI G  K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308

Query: 204 EGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVM 263
           +  +  + ++F EM  + ++ N +++ +LI+G C  G+I  A++   +M++ GV+P+L+ 
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368

Query: 264 YNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 323
           YN L+NG CK   + +A  +   +K  G  P    Y  LID YCK G ++    +++ M 
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428

Query: 324 EEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPDDATYTMVIDGYCKNGDVK 383
            EG+V D   +  +I+GLCR+G +  A++   ++   G+ PD  T+ ++++GYC+ G+ +
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR 488

Query: 384 TGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNA-NMLLEAMLNLGVTPDDITYNIL 443
               LLKEM + G  P  +TYN++M G CK+G +K A NM  +      +  +  +YN+L
Sbjct: 489 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 548

Query: 444 LEGHCKSGRAEDFLHLRN---EKGVVVDYAYY 468
           L+G+ + G+ ED   L N   EKG+V +   Y
Sbjct: 549 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

BLAST of Cp4.1LG03g05680 vs. NCBI nr
Match: XP_023526542.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 978 bits (2528), Expect = 0.0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 138 MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 197

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 198 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 257

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE
Sbjct: 258 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 317

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 318 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 377

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID
Sbjct: 378 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 437

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP
Sbjct: 438 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 497

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 498 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 557

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD
Sbjct: 558 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 617

Query: 481 RRKR 484
           RRKR
Sbjct: 618 RRKR 621

BLAST of Cp4.1LG03g05680 vs. NCBI nr
Match: KAG7017964.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 967 bits (2500), Expect = 0.0
Identity = 477/484 (98.55%), Postives = 481/484 (99.38%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLING CKSRNLDECFRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGLCKSRNLDECFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RI+PDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLR NDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIHPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRPNDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTL+NGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLINGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP
Sbjct: 411 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. NCBI nr
Match: KAG6581232.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 966 bits (2496), Expect = 0.0
Identity = 476/484 (98.35%), Postives = 481/484 (99.38%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLING CKSRNLDECFRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGLCKSRNLDECFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RI+PDVYTYSVLIHGLCK+GKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIHPDVYTYSVLIHGLCKQGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTL+NGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLINGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEA MKP
Sbjct: 411 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAAMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. NCBI nr
Match: XP_022934877.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moschata])

HSP 1 Score: 962 bits (2488), Expect = 0.0
Identity = 474/484 (97.93%), Postives = 480/484 (99.17%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLC HQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCVHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLING CKSRNLDECFRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGLCKSRNLDECFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RI+PDVYTYSVLIHGLCK+GKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIHPDVYTYSVLIHGLCKQGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTL+NGLCKVGDVSKARKLVDEMKMV MKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLINGLCKVGDVSKARKLVDEMKMVRMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGD+ESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP
Sbjct: 411 GYCKEGDIESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. NCBI nr
Match: XP_022983327.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita maxima])

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 472/484 (97.52%), Postives = 476/484 (98.35%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLC HQMFEESQSI+RFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCTHQMFEESQSIIRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPT VSFNTLING CKSRNLDE FRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTTVSFNTLINGLCKSRNLDESFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RIYPDVYTYSVLIHGLCKEG+VDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIYPDVYTYSVLIHGLCKEGRVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMN EGVVLDNVAFTAIISGLCRDGRVMDAE TLREMKEAGMKP
Sbjct: 411 GYCKEGDLESAMEIRKGMNVEGVVLDNVAFTAIISGLCRDGRVMDAEGTLREMKEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVK GFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKPGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. ExPASy TrEMBL
Match: A0A6J1F410 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita moschata OX=3662 GN=LOC111441918 PE=4 SV=1)

HSP 1 Score: 962 bits (2488), Expect = 0.0
Identity = 474/484 (97.93%), Postives = 480/484 (99.17%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLC HQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCVHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLING CKSRNLDECFRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGLCKSRNLDECFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RI+PDVYTYSVLIHGLCK+GKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIHPDVYTYSVLIHGLCKQGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTL+NGLCKVGDVSKARKLVDEMKMV MKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLINGLCKVGDVSKARKLVDEMKMVRMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGD+ESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP
Sbjct: 411 GYCKEGDIESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. ExPASy TrEMBL
Match: A0A6J1IYZ9 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxima OX=3661 GN=LOC111481940 PE=4 SV=1)

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 472/484 (97.52%), Postives = 476/484 (98.35%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFLC HQMFEESQSI+RFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCTHQMFEESQSIIRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCKQGSIRDARLIFDEIGKRGFRPT VSFNTLING CKSRNLDE FRLKK MEE
Sbjct: 231 NILINKFCKQGSIRDARLIFDEIGKRGFRPTTVSFNTLINGLCKSRNLDESFRLKKAMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RIYPDVYTYSVLIHGLCKEG+VDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS
Sbjct: 291 NRIYPDVYTYSVLIHGLCKEGRVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID
Sbjct: 351 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMN EGVVLDNVAFTAIISGLCRDGRVMDAE TLREMKEAGMKP
Sbjct: 411 GYCKEGDLESAMEIRKGMNVEGVVLDNVAFTAIISGLCRDGRVMDAEGTLREMKEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCKNGDVK GFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDGYCKNGDVKPGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           RRKR
Sbjct: 591 RRKR 594

BLAST of Cp4.1LG03g05680 vs. ExPASy TrEMBL
Match: A0A6J1CQA5 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica charantia OX=3673 GN=LOC111013174 PE=4 SV=1)

HSP 1 Score: 870 bits (2249), Expect = 1.25e-315
Identity = 427/484 (88.22%), Postives = 456/484 (94.21%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MA+FLCAH+MF ES SIVRFLVSRKGKDSA+SIFAAILE+  TR SN VFDALMIAY+DS
Sbjct: 111 MAHFLCAHRMFAESHSIVRFLVSRKGKDSASSIFAAILEVAGTRSSNLVFDALMIAYADS 170

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIP RGC YLLDKMMNSNS V+IWTFY EI+DSGFPP VKYF
Sbjct: 171 GFVSDAIQCFRLVRKYNFQIPSRGCGYLLDKMMNSNSTVSIWTFYSEIMDSGFPPNVKYF 230

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCK+G+IRDARLIF EIGKRG RPT VSFNTLING CKS+NLDE FRLKK+MEE
Sbjct: 231 NILINKFCKEGNIRDARLIFFEIGKRGLRPTTVSFNTLINGLCKSQNLDEGFRLKKIMEE 290

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RIYPDV+TYSVLIHGLCKEG++ DAEQLFDEM+QRGL+ NDVTFT LI+GQCRSG+IDS
Sbjct: 291 NRIYPDVFTYSVLIHGLCKEGRLYDAEQLFDEMQQRGLKPNDVTFTTLINGQCRSGQIDS 350

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTYQQML MGVKPDLVMYNTLLNGLCKVGDVSKARKL+ EMKMVGMKPDKITYTTLID
Sbjct: 351 AMNTYQQMLTMGVKPDLVMYNTLLNGLCKVGDVSKARKLIGEMKMVGMKPDKITYTTLID 410

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESAMEIRKGMNEEGVVLD+VAFTA+ISGLCRDGRV+DAERTLREM EAGMKP
Sbjct: 411 GYCKEGDLESAMEIRKGMNEEGVVLDDVAFTALISGLCRDGRVIDAERTLREMMEAGMKP 470

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVID YCK GDVK GFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL
Sbjct: 471 DDATYTMVIDEYCKKGDVKMGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 530

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCK+G+AED + LRNEKG+VVDYAYYTSLVGEYDKSLKD
Sbjct: 531 EAMLNLGVTPDDITYNILLEGHCKNGKAEDSIKLRNEKGLVVDYAYYTSLVGEYDKSLKD 590

Query: 481 RRKR 484
           R+KR
Sbjct: 591 RQKR 594

BLAST of Cp4.1LG03g05680 vs. ExPASy TrEMBL
Match: A0A5A7TWU4 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00320 PE=4 SV=1)

HSP 1 Score: 863 bits (2231), Expect = 5.24e-313
Identity = 421/484 (86.98%), Postives = 451/484 (93.18%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFL AHQMFEE QSI+RFLVSRKGKDSAAS+FAAIL+I  TRCSNFVFDALMIAY DS
Sbjct: 107 MANFLSAHQMFEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDS 166

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIPF GC YLLDKMMNSNSPVTIWTFY EILDSGFPP VKYF
Sbjct: 167 GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYF 226

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCK+GS RDA+LIFDEI K G RPT VSFNTLING CKSRNLDE FRLKK+MEE
Sbjct: 227 NILINKFCKEGSTRDAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEE 286

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RIYPDV+TYSVLIH LCKEG++D+AEQLFDEM++RGLR N VTFTALIDGQC+  +IDS
Sbjct: 287 NRIYPDVFTYSVLIHRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDS 346

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTY QML MGVKPDLVMYNTLL GLCKVGDV+KARKL+DEM+MVGMKPDKI+YTTLID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLID 406

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESA+EIRKGMNEEGVVLDNVAFTA+ISG CRDGRV DAERTLREM EAGMKP
Sbjct: 407 GYCKEGDLESALEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKP 466

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCK GDVKTGFK+LKEMQ NGH PGVITYNVLMNGLCKQGQMKNA+MLL
Sbjct: 467 DDATYTMVIDGYCKKGDVKTGFKMLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAHMLL 526

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCK+G+AED L LRNEKG+++DYAYYTSLVGEYDKSLKD
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIIDYAYYTSLVGEYDKSLKD 586

Query: 481 RRKR 484
           R+KR
Sbjct: 587 RQKR 590

BLAST of Cp4.1LG03g05680 vs. ExPASy TrEMBL
Match: A0A1S3C629 (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo OX=3656 GN=LOC103496868 PE=4 SV=1)

HSP 1 Score: 863 bits (2231), Expect = 5.24e-313
Identity = 421/484 (86.98%), Postives = 451/484 (93.18%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           MANFL AHQMFEE QSI+RFLVSRKGKDSAAS+FAAIL+I  TRCSNFVFDALMIAY DS
Sbjct: 107 MANFLSAHQMFEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDS 166

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIPF GC YLLDKMMNSNSPVTIWTFY EILDSGFPP VKYF
Sbjct: 167 GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYF 226

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NILINKFCK+GS RDA+LIFDEI K G RPT VSFNTLING CKSRNLDE FRLKK+MEE
Sbjct: 227 NILINKFCKEGSTRDAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEE 286

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           +RIYPDV+TYSVLIH LCKEG++D+AEQLFDEM++RGLR N VTFTALIDGQC+  +IDS
Sbjct: 287 NRIYPDVFTYSVLIHRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDS 346

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
           AMNTY QML MGVKPDLVMYNTLL GLCKVGDV+KARKL+DEM+MVGMKPDKI+YTTLID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLID 406

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           GYCKEGDLESA+EIRKGMNEEGVVLDNVAFTA+ISG CRDGRV DAERTLREM EAGMKP
Sbjct: 407 GYCKEGDLESALEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKP 466

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DDATYTMVIDGYCK GDVKTGFK+LKEMQ NGH PGVITYNVLMNGLCKQGQMKNA+MLL
Sbjct: 467 DDATYTMVIDGYCKKGDVKTGFKMLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAHMLL 526

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           EAMLNLGVTPDDITYNILLEGHCK+G+AED L LRNEKG+++DYAYYTSLVGEYDKSLKD
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIIDYAYYTSLVGEYDKSLKD 586

Query: 481 RRKR 484
           R+KR
Sbjct: 587 RQKR 590

BLAST of Cp4.1LG03g05680 vs. TAIR 10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 607.4 bits (1565), Expect = 9.7e-174
Identity = 290/484 (59.92%), Postives = 367/484 (75.83%), Query Frame = 0

Query: 1   MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 60
           +A FL  H+MF E+QS++  +VSRKGK+SA+S+F +++E+  T    F+ DALMI Y+D 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDL 183

Query: 61  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 120
           GFI DAIQCFRL RK  F +P RGC  LLD+MM  N   TIW FY+EILD+GFP  V  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 121 NILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEE 180
           NIL+NKFCK+G+I DA+ +FDEI KR  +PT VSFNTLING+CK  NLDE FRLK  ME+
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 181 SRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDS 240
           SR  PDV+TYS LI+ LCKE K+D A  LFDEM +RGL  NDV FT LI G  R+G ID 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363

Query: 241 AMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLID 300
              +YQ+ML+ G++PD+V+YNTL+NG CK GD+  AR +VD M   G++PDKITYTTLID
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423

Query: 301 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKP 360
           G+C+ GD+E+A+EIRK M++ G+ LD V F+A++ G+C++GRV+DAER LREM  AG+KP
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483

Query: 361 DDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLL 420
           DD TYTM++D +CK GD +TGFKLLKEMQ +GH P V+TYNVL+NGLCK GQMKNA+MLL
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543

Query: 421 EAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRNEKGVVVDYAYYTSLVGEYDKSLKD 480
           +AMLN+GV PDDITYN LLEGH +   +      + E G+V D A Y S+V E D++ KD
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASKD 603

Query: 481 RRKR 485
            R R
Sbjct: 604 HRNR 607

BLAST of Cp4.1LG03g05680 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 305.8 bits (782), Expect = 6.0e-83
Identity = 157/488 (32.17%), Postives = 275/488 (56.35%), Query Frame = 0

Query: 3   NFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRC--SNFVFDALMIAYSDS 62
           + L   ++++ +Q +   + ++   D  AS+    L+ T   C  ++ VFD ++ +YS  
Sbjct: 88  HILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRL 147

Query: 63  GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTI-WTFYLEILDSGFPPKVKY 122
             I  A+    L +   F         +LD  + S   ++     + E+L+S   P V  
Sbjct: 148 SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 207

Query: 123 FNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVME 182
           +NILI  FC  G+I  A  +FD++  +G  P  V++NTLI+G+CK R +D+ F+L + M 
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267

Query: 183 ESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRID 242
              + P++ +Y+V+I+GLC+EG++ +   +  EM +RG   ++VT+  LI G C+ G   
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 243 SAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLI 302
            A+  + +ML  G+ P ++ Y +L++ +CK G++++A + +D+M++ G+ P++ TYTTL+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387

Query: 303 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMK 362
           DG+ ++G +  A  + + MN+ G     V + A+I+G C  G++ DA   L +MKE G+ 
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 363 PDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANML 422
           PD  +Y+ V+ G+C++ DV    ++ +EM   G  P  ITY+ L+ G C+Q + K A  L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 423 LEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRN---EKGVVVDYAYYTSLVGEYDK 482
            E ML +G+ PD+ TY  L+  +C  G  E  L L N   EKGV+ D   Y+ L+   +K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 483 SLKDRRKR 485
             + R  +
Sbjct: 568 QSRTREAK 575

BLAST of Cp4.1LG03g05680 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 276.9 bits (707), Expect = 3.0e-74
Identity = 148/479 (30.90%), Postives = 254/479 (53.03%), Query Frame = 0

Query: 3   NFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSN-FVFDALMIAYSDSG 62
           + L   +M++ ++ I++ L    GK S   +F A++       SN  V+D L+  Y   G
Sbjct: 120 HILVRARMYDPARHILKELSLMSGKSS--FVFGALMTTYRLCNSNPSVYDILIRVYLREG 179

Query: 63  FISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFN 122
            I D+++ FRL+    F      C  +L  ++ S   V++W+F  E+L     P V  FN
Sbjct: 180 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 239

Query: 123 ILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRNLDECFRLKKVMEES 182
           ILIN  C +GS   +  +  ++ K G+ PT V++NT+++ +CK         L   M+  
Sbjct: 240 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 299

Query: 183 RIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTALIDGQCRSGRIDSA 242
            +  DV TY++LIH LC+  ++     L  +MR+R +  N+VT+  LI+G    G++  A
Sbjct: 300 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 359

Query: 243 MNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVGMKPDKITYTTLIDG 302
                +ML+ G+ P+ V +N L++G    G+  +A K+   M+  G+ P +++Y  L+DG
Sbjct: 360 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 419

Query: 303 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAERTLREMKEAGMKPD 362
            CK  + + A      M   GV +  + +T +I GLC++G + +A   L EM + G+ PD
Sbjct: 420 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 479

Query: 363 DATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGLCKQGQMKNANMLLE 422
             TY+ +I+G+CK G  KT  +++  + R G +P  I Y+ L+   C+ G +K A  + E
Sbjct: 480 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 539

Query: 423 AMLNLGVTPDDITYNILLEGHCKSGR---AEDFLHLRNEKGVVVDYAYYTSLVGEYDKS 478
           AM+  G T D  T+N+L+   CK+G+   AE+F+      G++ +   +  L+  Y  S
Sbjct: 540 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596

BLAST of Cp4.1LG03g05680 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 274.2 bits (700), Expect = 1.9e-73
Identity = 138/430 (32.09%), Postives = 237/430 (55.12%), Query Frame = 0

Query: 49  VFDALMIAYSDSGFISDAIQCFRLVRKRNFQIPFRGCE-YLLDKMMNSNSPVTIWTFYLE 108
           VFD       D G + +A + F  +      +    C  YL     +     T    + E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 109 ILDSGFPPKVKYFNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRN 168
             + G    V  +NI+I+  C+ G I++A  +   +  +G+ P  +S++T++NG+C+   
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 169 LDECFRLKKVMEESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTA 228
           LD+ ++L +VM+   + P+ Y Y  +I  LC+  K+ +AE+ F EM ++G+  + V +T 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 229 LIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVG 288
           LIDG C+ G I +A   + +M +  + PD++ Y  +++G C++GD+ +A KL  EM   G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 289 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAE 348
           ++PD +T+T LI+GYCK G ++ A  +   M + G   + V +T +I GLC++G +  A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 349 RTLREMKEAGMKPDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGL 408
             L EM + G++P+  TY  +++G CK+G+++   KL+ E +  G N   +TY  LM+  
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 409 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRN---EKGVVVDY 468
           CK G+M  A  +L+ ML  G+ P  +T+N+L+ G C  G  ED   L N    KG+  + 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 469 AYYTSLVGEY 475
             + SLV +Y
Sbjct: 597 TTFNSLVKQY 606

BLAST of Cp4.1LG03g05680 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 274.2 bits (700), Expect = 1.9e-73
Identity = 138/430 (32.09%), Postives = 237/430 (55.12%), Query Frame = 0

Query: 49  VFDALMIAYSDSGFISDAIQCFRLVRKRNFQIPFRGCE-YLLDKMMNSNSPVTIWTFYLE 108
           VFD       D G + +A + F  +      +    C  YL     +     T    + E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 109 ILDSGFPPKVKYFNILINKFCKQGSIRDARLIFDEIGKRGFRPTAVSFNTLINGFCKSRN 168
             + G    V  +NI+I+  C+ G I++A  +   +  +G+ P  +S++T++NG+C+   
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 169 LDECFRLKKVMEESRIYPDVYTYSVLIHGLCKEGKVDDAEQLFDEMRQRGLRANDVTFTA 228
           LD+ ++L +VM+   + P+ Y Y  +I  LC+  K+ +AE+ F EM ++G+  + V +T 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 229 LIDGQCRSGRIDSAMNTYQQMLAMGVKPDLVMYNTLLNGLCKVGDVSKARKLVDEMKMVG 288
           LIDG C+ G I +A   + +M +  + PD++ Y  +++G C++GD+ +A KL  EM   G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 289 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAIISGLCRDGRVMDAE 348
           ++PD +T+T LI+GYCK G ++ A  +   M + G   + V +T +I GLC++G +  A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 349 RTLREMKEAGMKPDDATYTMVIDGYCKNGDVKTGFKLLKEMQRNGHNPGVITYNVLMNGL 408
             L EM + G++P+  TY  +++G CK+G+++   KL+ E +  G N   +TY  LM+  
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 409 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKSGRAEDFLHLRN---EKGVVVDY 468
           CK G+M  A  +L+ ML  G+ P  +T+N+L+ G C  G  ED   L N    KG+  + 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 469 AYYTSLVGEY 475
             + SLV +Y
Sbjct: 597 TTFNSLVKQY 606

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O044911.4e-17259.92Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
Q9FIX38.5e-8232.17Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9LVQ54.2e-7330.90Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q0WVK72.7e-7232.09Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
O045045.3e-6830.53Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_023526542.10.0100.00putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo s... [more]
KAG7017964.10.098.55putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
KAG6581232.10.098.35putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_022934877.10.097.93putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moscha... [more]
XP_022983327.10.097.52putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
A0A6J1F4100.097.93putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita mosc... [more]
A0A6J1IYZ90.097.52putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucurbita maxi... [more]
A0A6J1CQA51.25e-31588.22putative pentatricopeptide repeat-containing protein At1g09680 OS=Momordica char... [more]
A0A5A7TWU45.24e-31386.98Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3C6295.24e-31386.98putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo O... [more]
Match NameE-valueIdentityDescription
AT1G09680.19.7e-17459.92Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G39710.16.0e-8332.17Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G55840.13.0e-7430.90Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05670.11.9e-7332.09Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.21.9e-7332.09Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 216..248
e-value: 1.5E-7
score: 31.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 255..304
e-value: 1.9E-18
score: 66.4
coord: 395..444
e-value: 1.6E-16
score: 60.2
coord: 150..199
e-value: 5.1E-17
score: 61.8
coord: 326..374
e-value: 1.1E-15
score: 57.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 258..291
e-value: 2.2E-10
score: 38.1
coord: 328..361
e-value: 5.7E-9
score: 33.6
coord: 120..151
e-value: 2.4E-6
score: 25.4
coord: 188..221
e-value: 1.7E-11
score: 41.6
coord: 433..455
e-value: 0.0024
score: 15.9
coord: 364..396
e-value: 2.5E-10
score: 37.9
coord: 293..326
e-value: 9.0E-9
score: 33.0
coord: 153..187
e-value: 1.7E-8
score: 32.2
coord: 223..256
e-value: 3.7E-8
score: 31.0
coord: 398..431
e-value: 1.4E-7
score: 29.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 120..148
e-value: 7.9E-4
score: 19.5
coord: 49..78
e-value: 0.88
score: 10.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 11.904029
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 12.484979
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 13.08785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 13.328999
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 12.495939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 10.731171
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 12.75901
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 14.819736
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 252..341
e-value: 1.3E-30
score: 108.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 342..484
e-value: 7.4E-39
score: 136.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 83..251
e-value: 1.6E-43
score: 151.2
NoneNo IPR availablePANTHERPTHR47932:SF51PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 1..483
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1..483

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g05680.1Cp4.1LG03g05680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding