Cp4.1LG03g04800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g04800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	eukaryotic initiation factor 4A-III
Location	Cp4.1LG03: 5222609 .. 5227370 (-)
RNA-Seq Expression	Cp4.1LG03g04800
Synteny	Cp4.1LG03g04800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAATAAATTTTTACATCTTACTTTCTCGTTTCGTTGTCGATCGATCTTTCATTGGCCCTAATCTGCGGTTTCCTCACCATCTTTTTCCCCTCGCCGTCGCTTACTTGCTCGGCATCATCCGGTTAATCGAGTCCTCAATCGCGATCTAGGAAACTACGCCAACGGACATGGCGGCTGCAGCTACAACAAGCGTTGTACCGCCGAATCGGCGGCGTGCGGTTACTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAGCCGATCTTGAGTTTTGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCATACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAGGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGTGAGTCCCGTTTACTCTATCGAGTATTCAATGTTCATGTCTCTCTTCCTCTTAATATATTTCTTATTTTTGTATTGGATTCAAATTCTATAGAAGTTGTGTAGTTCCTAGCTCAGAAATCCAAATGCACAGGAAGAAAATTGTTTGGATGTCAGTTGGTTCTTTTCACAAGAAGTTGTTATAACCTCGTGTTATTTAGCTTTGGAATTTCGCTAGGATGCCAAATTAATGAAACCTCCCCAAAGTACCACTACATTCGTTTTTTTGTCGTAGAAGATTTGAATATGCATTCAACTCCTAGCCCAGGAGATTTTTTCAATTTACACATGATCGTTTTTGTAAGACGATCTCTTTAACTTCAAACTCTTATGATCATTATGCATCTTAATCTAATCAGGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACCCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGTAATTTTGGGTGCCCTTCAATTTATCTCTCCTGTTAGCAGTATAATTATCTCTCTTTTATCATGTCATTTTCTAATATTTGATTTTTCAGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTTTCCTTCTCTCCCCCTTCCCCCCAATGTGTTAATGATTGTGCTCATGGGAGGCATAGGAGGATAAAAATGAAATTCTGCTCTATCATTGAATTGTTGCTAAGCATGTCTTCTTTAACTTGTTGAACATGAAAATTATTATTTTTCATACATGCTTTTCTAAACGTATTGATGACAAATTTGTAGTTTCAATAATATTTTTTCTGCAATATTACATGTTGATTTTCTATTTTGTACGGGAAGAGTTAGGACTTCTCAGACGACCAAGAAATAACAGTAGTGTTTTCCCAAATAATTTTTTATGGTTTCTATGATGTCGTGCTTGATGTGGCTGACATTTAATCTTGATATTTGCTTGCATTTGTTTCCTTCATGTGTCAGTTTATAACAAATGTGATATTGATTATATATTCTTGTACATATGGGATTTCTAAATTTTATACTTTATATGTCATTTTATGCACTGTTTAACGGTTTGGTTATGAGCAACTAGTGTCTTTTACTTGTTTTTATGAATTTTTCTATTTTTAGGTTGGTTGATTTAATGAGTTTTCCCATCAATATTAATGATAGGTTGTCTTGATTTCTGCTACCCTTCCTCATGAAATCCTTGAGATGACAAACAAGTTTATGACAGATCCTGTGAGGATCCTTGTCAAGCGTGATGAGTTAACTTTAGAGGTTCGTAATATTTTATTTTTAGATGATGAAATGCTCTCCTGAAATATATCAACACCCTGATGCATGCTTTTAAATTGACAGGGTATTAAGCAATTCTTCGTTGCAGTTGAAAGGGAAGAGTGGAAGTTTGATACCTTATGTGATCTTTATGACACCTTGACTATCACCCAAGCTGTAATTTTCTGTAACACCAAGCGAAAGGTAATGTGGGTCAAATTTGTTTAGTTCTCCTTCAAGTAGATCTTCTAGAACTCTTGTCAGACTCATTCTGAAACCAAAAATATTTTATTGTTAGATATTTTATGCATGTTTGCCTCTATACATGATTTTGGTATGTTCCGAATGTTTGGAACATTGTTTGCGCAACCTTTGGTCCTCATCCTTATTTATTGTTTTAGTACAATTTTACCCCGCAACAGTGTGACCTGAAAAGTCTATTTGAGGATAGAACTAGCTTTTATTAATTAGGAAGAGCACATCATTGCATAAGGATAATCCCAGAGATCCTCTACACTCATAACCCCTGGTCACTATAACCCAAAAAGTACCCATATTCTACTGGACTTTCCTTCTAAATACTTGCTGAGGATCACACTGAAGCTAACTATTTGTTGCAAAGCGTCCTACAGCCTCTATCACAACTACTTATCAGACCTATCCCTTACCCTTTTTCTACTATGTGCTTCTAACAACTGGATGCCTATCTCTGTTCTAGATCACATTGCACTGATTCTTGGACTCCTTTATCTGATGTGAGAATTTAAATATTTTCTCTTTCATGGGGGTTTCTGCCTTTTTGTATTTGCATACTATCATTGAAATTGTTTCTTATAGATTTTTTTATGTGATCTGCTGCCTCCAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACACGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGCAAGTTATTGGTTCTTTTATTTTATTGATCTTTTTCAATGCGTCGTATGAGTTCATGCTGCTCTAGTTGTAGTTGTCTTAGTTAATTTCATGTTGGTACTCAATGAAGCTAGAATGAATAAATGATAATATGATCTGATCGAGTATACTATTTTCTCTATGTTCTCCATAACTCTTCTTAGTGTTGAGTTGAGTGTTATAATGTCCGTAAAATTATTTGTAACAGAATCATATGCATTAGTTCGATTGTCTTTAGTTCTCCCATAGTGAAGATTGTCATTGTGCTTTCTTCATTCATGAGGTCCTTTTCTTCCCGCCCTTTTGAGACAAGTGACAGTTTCTGTGGAGCGCCTCTTGTTTTTCAGTTCTTTGGTCACTAGTGAGGTTTACTGCGTCTTTTTGGTCTTCGGTTGTTTAGGAGTTATGTAACTATTTATTAGGTTTTATTCTTCTCGATTGGAGCCCTTTCTGTATAGTTCTTTGTGACTTCCTTTCTGGGCGGTCCTTTTTGTTCTTCTGTTTTCTTTCATATTTCTCAATGAAACAGGTGTTTCGTATAGAAAAATGGTCTTCTATTTATGAACATACCATTAGTCAGTTGATCACTTGGATACTTTGTGGATCATATGCATCAGTTATAGGTTACTAAGGTAGTTTTATCAAAGGATATGAAGTCGTGTAAAATGATCATGGTGTTTTTTTCCATGTTTGGTGAATCACTGGTTAATCATTTTCTATTCTCTAGAAAAACATCTCTAAATGATGATATATAGAGAGGAGTAGGCGTTGGATTTTTTGAGGACAATTTTTTTTTTTTCTAGTTTACATCATCAATTGGTACGTCCCACAAATCTCCGTGAATGGCCTAATTTGAACTCCCATACATATTGTAAATATCTTTGTGCTTATTTTCCTTTCATTACTGATCGTGGCAAGTATCCCAAAAAATATACAAGTTCTTATGTTTATTTGCATTAACCTTTGTCAGGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGTATTACACTTTATTCTATATTACAGTTGATTTCCTAGGAGTCCGCTCAAAGTAAACAGTATGGATAACATGTAGCTTTATGTTTCCTTGCATGAAGGCCATGTTTATGATTTCTTACATGGAAGCTATGTCTAACTTGAAACTTCACCAACCTTGTGAAAGTAATGAAACACTTTTTAATGCGGATTTATGGCTTAACACAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAACTCTGCGTGATGCTGTTATATGCTGTGTGGAAGATTTGTGTTAATATGCTCACACTCGAGGGTTTGTGTTCTTATAAACGTCGTTTTTATGGGTGATAATATGTAGCGTAGGAAGTTTAACGACCTTTTTCTGATTAGTGGCTTGGATGTGTCCATAAATTGTATAATACCTGCGATTGTTTTCCATTTTTCCAAGGGGGAAAGGAACTCAGATATATTTTCGATGACTTGAAATATATTATTCTGAGATAAGTTGTGTTACGCATCCCATCATTTGCTTAGATCAGCTCCGTTTTTCTTGTAATGGGTCCCTTTCAAAATTCTGGATTTGGGCATTTCTAATGAAGATCCAATGATTTTAAATT

mRNA sequence

CACAATAAATTTTTACATCTTACTTTCTCGTTTCGTTGTCGATCGATCTTTCATTGGCCCTAATCTGCGGTTTCCTCACCATCTTTTTCCCCTCGCCGTCGCTTACTTGCTCGGCATCATCCGGTTAATCGAGTCCTCAATCGCGATCTAGGAAACTACGCCAACGGACATGGCGGCTGCAGCTACAACAAGCGTTGTACCGCCGAATCGGCGGCGTGCGGTTACTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAGCCGATCTTGAGTTTTGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCATACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAGGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACCCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACACGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGCAAGTTATTGGTTCTTTTATTTTATTGATCTTTTTCAATGCGTCGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAACTCTGCGTGATGCTGTTATATGCTGTGTGGAAGATTTGTGTTAATATGCTCACACTCGAGGGTTTGTGTTCTTATAAACGTCGTTTTTATGGGTGATAATATGTAGCGTAGGAAGTTTAACGACCTTTTTCTGATTAGTGGCTTGGATGTGTCCATAAATTGTATAATACCTGCGATTGTTTTCCATTTTTCCAAGGGGGAAAGGAACTCAGATATATTTTCGATGACTTGAAATATATTATTCTGAGATAAGTTGTGTTACGCATCCCATCATTTGCTTAGATCAGCTCCGTTTTTCTTGTAATGGGTCCCTTTCAAAATTCTGGATTTGGGCATTTCTAATGAAGATCCAATGATTTTAAATT

Coding sequence (CDS)

ATGGCGGCTGCAGCTACAACAAGCGTTGTACCGCCGAATCGGCGGCGTGCGGTTACTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAGCCGATCTTGAGTTTTGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCATACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAGGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACCCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACACGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGCAAGTTATTGGTTCTTTTATTTTATTGATCTTTTTCAATGCGTCGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAA

Protein sequence

MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI

Homology

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BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot
Match: P41380 (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.8e-150
Identity = 288/404 (71.29%), Postives = 297/404 (73.51%), Query Frame = 0


Query: 22  EDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQA 81
           ED+L FET++GVEPI SF +MGIKDDLLRG+Y YGFEKPSAIQQRAV PII GRDVIAQA
Sbjct: 3   EDRLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQA 62

Query: 82  QSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIG 141
           QSGTGKTSMIALTVCQ+VDT S EVQALILSPTRELA QTEKVILAIGDYIN+QAH+CIG
Sbjct: 63  QSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIG 122

Query: 142 GKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 201
           GKSVGEDIRKLE GVQVVSGTPGRVCDMIKRRTLRTR IKLLILDESDEMLSRGFKDQIY
Sbjct: 123 GKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIY 182

Query: 202 DVYRYLPPELQ------------------------------------------------- 261
           DVYRYLPPELQ                                                 
Sbjct: 183 DVYRYLPPELQVVLISATLPNEILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 242

Query: 262 ---------------------------VEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGE 321
                                      V+WLT KMR NNFTVS MHGDMPQKERDAIM E
Sbjct: 243 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAE 302

Query: 322 FRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHRIGR 350
           FR GTTRVLITTDVWARGLDVQQ               VSLVINYDLPNNRELYIHRIGR
Sbjct: 303 FRGGTTRVLITTDVWARGLDVQQ---------------VSLVINYDLPNNRELYIHRIGR 362

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BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot
Match: Q5VNM3 (Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3A PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.2e-147
Identity = 287/423 (67.85%), Postives = 305/423 (72.10%), Query Frame = 0


Query: 3   AAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSA 62
           AAATTS     RR      ++ L FET+ GVE I SFDQMGI+DDLLRGIYAYGFEKPSA
Sbjct: 2   AAATTS-----RRGPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSA 61

Query: 63  IQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTE 122
           IQQRAV PII GRDVIAQAQSGTGKTSMI+L+VCQ+VDT+ REVQALILSPTRELA QTE
Sbjct: 62  IQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTE 121

Query: 123 KVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKL 182
           +V+LAIGD+INIQ H+CIGGKS+GEDIRKLE GV VVSGTPGRVCDMIKRRTLRTRAIKL
Sbjct: 122 RVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKL 181

Query: 183 LILDESDEMLSRGFKDQIYDVYRYLPPELQ------------------------------ 242
           LILDE+DEML RGFKDQIYDVYRYLPPELQ                              
Sbjct: 182 LILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKR 241

Query: 243 ----------------------------------------------VEWLTEKMRSNNFT 302
                                                         V+WLTE+MRSNNFT
Sbjct: 242 DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFT 301

Query: 303 VSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSL 350
           VS MHGDMPQKERDAIMGEFRSG TRVLITTDVWARGLDVQQ               VSL
Sbjct: 302 VSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQ---------------VSL 361

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot
Match: Q10I26 (Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3B PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.2e-147
Identity = 287/423 (67.85%), Postives = 305/423 (72.10%), Query Frame = 0


Query: 3   AAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSA 62
           AAATTS     RR      ++ L FET+ GVE I SFDQMGI++DLLRGIYAYGFEKPSA
Sbjct: 2   AAATTS-----RRGPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSA 61

Query: 63  IQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTE 122
           IQQRAV PII GRDVIAQAQSGTGKTSMI+L+VCQ+VDT+ REVQALILSPTRELA QTE
Sbjct: 62  IQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTE 121

Query: 123 KVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKL 182
           +V+LAIGDYINIQ H+CIGGKS+GEDIRKLE GV VVSGTPGRVCDMIKRRTLRTRAIKL
Sbjct: 122 RVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKL 181

Query: 183 LILDESDEMLSRGFKDQIYDVYRYLPPELQ------------------------------ 242
           LILDE+DEML RGFKDQIYDVYRYLPPELQ                              
Sbjct: 182 LILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKR 241

Query: 243 ----------------------------------------------VEWLTEKMRSNNFT 302
                                                         V+WLTE+MRSNNFT
Sbjct: 242 DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFT 301

Query: 303 VSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSL 350
           VS MHGDMPQKERDAIMGEFRSG TRVLITTDVWARGLDVQQ               VSL
Sbjct: 302 VSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQ---------------VSL 361

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot
Match: Q94A52 (Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=EIF4A3 PE=1 SV=2)

HSP 1 Score: 515.8 bits (1327), Expect = 3.9e-145
Identity = 282/412 (68.45%), Postives = 300/412 (72.82%), Query Frame = 0


Query: 14  RRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIE 73
           RR      +DKL FETT+G+EPI SF+ MGIK+D+LRG+Y YGFEKPSAIQQRAV PI++
Sbjct: 12  RRGGGAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQ 71

Query: 74  GRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYIN 133
           GRDVIAQAQSGTGKTSMIAL+VCQVVDTSSREVQALILSPTRELATQTEK I AIG + N
Sbjct: 72  GRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHAN 131

Query: 134 IQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLS 193
           IQAH+CIGG SVGEDIRKLE GV VVSGTPGRVCDMIKRR+LRTRAIKLLILDESDEMLS
Sbjct: 132 IQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLS 191

Query: 194 RGFKDQIYDVYRYLPPELQV---------------------------------------- 253
           RGFKDQIYDVYRYLPP+LQV                                        
Sbjct: 192 RGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQF 251

Query: 254 -------EW-----------------------------LTEKMRSNNFTVSHMHGDMPQK 313
                  EW                             L+EKMRS+NFTVS MHGDMPQK
Sbjct: 252 FVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQK 311

Query: 314 ERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRE 350
           ERDAIM EFRSG +RVLITTDVWARG+DVQQ               VSLVINYDLPNNRE
Sbjct: 312 ERDAIMNEFRSGDSRVLITTDVWARGIDVQQ---------------VSLVINYDLPNNRE 371

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BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot
Match: Q7ZVA6 (Eukaryotic initiation factor 4A-III OS=Danio rerio OX=7955 GN=eif4a3 PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-127
Identity = 243/419 (58.00%), Postives = 288/419 (68.74%), Query Frame = 0


Query: 7   TSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQR 66
           T+VVP  +R        K+EFET+E V+   +FD MG+++DLLRGIYAYGFEKPSAIQQR
Sbjct: 3   TAVVPVRKRILKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQR 62

Query: 67  AVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVIL 126
           A++ II+GRDVIAQ+QSGTGKT+   ++V Q +D   RE QALIL+PTRELA Q +KV+L
Sbjct: 63  AIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLL 122

Query: 127 AIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILD 186
           A+GDY+N+Q H+CIGG +VGEDIRKL++G  VV+GTPGRV DMI+RR+LRTRAIK+L+LD
Sbjct: 123 ALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLD 182

Query: 187 ESDEMLSRGFKDQIYDVYRYLPPELQ---------------------------------- 246
           E+DEML++GFK+QIYDVYRYLPP  Q                                  
Sbjct: 183 EADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 242

Query: 247 ------------------------------------------VEWLTEKMRSNNFTVSHM 306
                                                     V+WLTEKMR  NFTVS M
Sbjct: 243 LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSM 302

Query: 307 HGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINY 350
           HGDMPQKER++IM EFRSG +RVLI+TDVWARGLDV Q               VSL+INY
Sbjct: 303 HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQ---------------VSLIINY 362

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BLAST of Cp4.1LG03g04800 vs. NCBI nr
Match: XP_022935146.1 (eukaryotic initiation factor 4A-3 [Cucurbita moschata] >XP_023528747.1 eukaryotic initiation factor 4A-3 [Cucurbita pepo subsp. pepo] >KAG6581546.1 hypothetical protein SDJN03_21548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 614 bits (1583), Expect = 2.97e-219
Identity = 334/425 (78.59%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. NCBI nr
Match: XP_022983495.1 (eukaryotic initiation factor 4A-3 [Cucurbita maxima] >KAG7018051.1 hypothetical protein SDJN02_19917, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612 bits (1579), Expect = 1.21e-218
Identity = 333/425 (78.35%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRAV+APEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. NCBI nr
Match: XP_022949081.1 (eukaryotic initiation factor 4A-3-like [Cucurbita moschata] >XP_022998447.1 eukaryotic initiation factor 4A-3-like [Cucurbita maxima] >XP_023525647.1 eukaryotic initiation factor 4A-3-like [Cucurbita pepo subsp. pepo] >KAG6606907.1 hypothetical protein SDJN03_00249, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610 bits (1572), Expect = 1.40e-217
Identity = 329/425 (77.41%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRA+TAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. NCBI nr
Match: XP_004148574.1 (eukaryotic initiation factor 4A-3 [Cucumis sativus] >KGN58518.1 hypothetical protein Csa_001953 [Cucumis sativus])

HSP 1 Score: 605 bits (1561), Expect = 6.64e-216
Identity = 326/425 (76.71%), Postives = 333/425 (78.35%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRR ++APEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. NCBI nr
Match: KAF4402988.1 (hypothetical protein G4B88_010440 [Cannabis sativa])

HSP 1 Score: 602 bits (1553), Expect = 7.20e-216
Identity = 314/351 (89.46%), Postives = 321/351 (91.45%), Query Frame = 0


Query: 1   MAAAATTSVVPPNR--RRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFE 60
           MAA ATTSVVP NR  RR     EDKLEF TTEGVEPILSFDQMGIKDDLLRGIY YGFE
Sbjct: 1   MAAPATTSVVPANRTARRGGMPMEDKLEFVTTEGVEPILSFDQMGIKDDLLRGIYGYGFE 60

Query: 61  KPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELA 120
           KPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ+VDTS+REVQALILSPTRELA
Sbjct: 61  KPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQLVDTSTREVQALILSPTRELA 120

Query: 121 TQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTR 180
           +QTEKVILAIG +INIQAHSCIGGKSVGEDIR+LE+GV VVSGTPGRVCDMIKRRTLRTR
Sbjct: 121 SQTEKVILAIGSFINIQAHSCIGGKSVGEDIRQLEYGVHVVSGTPGRVCDMIKRRTLRTR 180

Query: 181 AIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVEWLTEKMRSNNFTVSHMHGDMPQKE 240
           AIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQV+WLTEKMRSNNFTVS MHGDMPQKE
Sbjct: 181 AIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVDWLTEKMRSNNFTVSAMHGDMPQKE 240

Query: 241 RDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNREL 300
           RDAIMGEFR GTTRVLITTDVWARGLDVQQ               VSLVINYDLPNNREL
Sbjct: 241 RDAIMGEFRDGTTRVLITTDVWARGLDVQQ---------------VSLVINYDLPNNREL 300

Query: 301 YIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 349
           YIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 301 YIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 336

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL
Match: A0A6J1F3Q9 (eukaryotic initiation factor 4A-3 OS=Cucurbita moschata OX=3662 GN=LOC111442104 PE=4 SV=1)

HSP 1 Score: 614 bits (1583), Expect = 1.44e-219
Identity = 334/425 (78.59%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL
Match: A0A6J1J605 (eukaryotic initiation factor 4A-3 OS=Cucurbita maxima OX=3661 GN=LOC111482085 PE=4 SV=1)

HSP 1 Score: 612 bits (1579), Expect = 5.84e-219
Identity = 333/425 (78.35%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRAV+APEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL
Match: A0A6J1K814 (eukaryotic initiation factor 4A-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493076 PE=4 SV=1)

HSP 1 Score: 610 bits (1572), Expect = 6.79e-218
Identity = 329/425 (77.41%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRA+TAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL
Match: A0A6J1GB02 (eukaryotic initiation factor 4A-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452540 PE=4 SV=1)

HSP 1 Score: 610 bits (1572), Expect = 6.79e-218
Identity = 329/425 (77.41%), Postives = 334/425 (78.59%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRRA+TAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL
Match: A0A0A0L9P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G654480 PE=4 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 3.21e-216
Identity = 326/425 (76.71%), Postives = 333/425 (78.35%), Query Frame = 0


Query: 1   MAAAATTSVVPPNRRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAATTSVVPPNRRR ++APEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATTSVVPPNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQV--------------------------- 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQV                           
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 -------------------------------------------------EWLTEKMRSNN 300
                                                            EWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVV 349
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ               V
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ---------------V 360

[Close]

BLAST of Cp4.1LG03g04800 vs. TAIR 10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III )

HSP 1 Score: 515.8 bits (1327), Expect = 2.8e-146
Identity = 282/412 (68.45%), Postives = 300/412 (72.82%), Query Frame = 0


Query: 14  RRRAVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIE 73
           RR      +DKL FETT+G+EPI SF+ MGIK+D+LRG+Y YGFEKPSAIQQRAV PI++
Sbjct: 12  RRGGGAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQ 71

Query: 74  GRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYIN 133
           GRDVIAQAQSGTGKTSMIAL+VCQVVDTSSREVQALILSPTRELATQTEK I AIG + N
Sbjct: 72  GRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHAN 131

Query: 134 IQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLS 193
           IQAH+CIGG SVGEDIRKLE GV VVSGTPGRVCDMIKRR+LRTRAIKLLILDESDEMLS
Sbjct: 132 IQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLS 191

Query: 194 RGFKDQIYDVYRYLPPELQV---------------------------------------- 253
           RGFKDQIYDVYRYLPP+LQV                                        
Sbjct: 192 RGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQF 251

Query: 254 -------EW-----------------------------LTEKMRSNNFTVSHMHGDMPQK 313
                  EW                             L+EKMRS+NFTVS MHGDMPQK
Sbjct: 252 FVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQK 311

Query: 314 ERDAIMGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRE 350
           ERDAIM EFRSG +RVLITTDVWARG+DVQQ               VSLVINYDLPNNRE
Sbjct: 312 ERDAIMNEFRSGDSRVLITTDVWARGIDVQQ---------------VSLVINYDLPNNRE 371

[Close]

BLAST of Cp4.1LG03g04800 vs. TAIR 10
Match: AT1G51380.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 1.5e-115
Identity = 225/407 (55.28%), Postives = 272/407 (66.83%), Query Frame = 0


Query: 19  TAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVI 78
           T  E+ L FETT+G++PI SFD MG+ D +LRG+Y YG++KPS IQQRA+ PI++GRDVI
Sbjct: 4   TLDEENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVI 63

Query: 79  AQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHS 138
           AQAQSGTGKTSMIA++VCQ+V+ SSR+VQ L+LSP+RELA+QTEK I AIG + NIQAH+
Sbjct: 64  AQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHA 123

Query: 139 CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKD 198
           CIGGKS+GEDI+KLE GV  VSGTPGRV DMIKR +L+T+A+KLL+LDESDEMLS+G KD
Sbjct: 124 CIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKD 183

Query: 199 QIYDVYRYLPPELQ---------------------------------------------- 258
           QIYDVYR LP ++Q                                              
Sbjct: 184 QIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVD 243

Query: 259 ------------------------------VEWLTEKMRSNNFTVSHMHGDMPQKERDAI 318
                                         V+WLTEKMRS+NF VS MHGD  QKERD I
Sbjct: 244 KEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDI 303

Query: 319 MGEFRSGTTRVLITTDVWARGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHR 350
           M +FRS  +RVLI +DVWARG+DVQ                VS VINYD+PNN ELYIHR
Sbjct: 304 MNQFRSFKSRVLIASDVWARGIDVQ---------------TVSHVINYDIPNNPELYIHR 363

[Close]

BLAST of Cp4.1LG03g04800 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 348.6 bits (893), Expect = 5.9e-96
Identity = 191/388 (49.23%), Postives = 240/388 (61.86%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD MG++++LLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 40  SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D S  + QAL+L+PTRELA Q EKV+ A+GDY+ ++ H+C+GG SV ED R L+ GV 
Sbjct: 100 QLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 159

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQ----- 217
           VV GTPGRV DM+KR++LR   IK+ +LDE+DEMLSRGFKDQIYD+++ LPP++Q     
Sbjct: 160 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219

Query: 218 ------------------------------------------------------------ 277
                                                                       
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 279

Query: 278 -----------VEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
                      V+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339

Query: 338 RGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 350
           RG+DVQQ               VSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINFV  
Sbjct: 340 RGIDVQQ---------------VSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 399

[Close]

BLAST of Cp4.1LG03g04800 vs. TAIR 10
Match: AT3G13920.3 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 348.6 bits (893), Expect = 5.9e-96
Identity = 191/388 (49.23%), Postives = 240/388 (61.86%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD MG++++LLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 30  SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 89

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D S  + QAL+L+PTRELA Q EKV+ A+GDY+ ++ H+C+GG SV ED R L+ GV 
Sbjct: 90  QLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 149

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQ----- 217
           VV GTPGRV DM+KR++LR   IK+ +LDE+DEMLSRGFKDQIYD+++ LPP++Q     
Sbjct: 150 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 209

Query: 218 ------------------------------------------------------------ 277
                                                                       
Sbjct: 210 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 269

Query: 278 -----------VEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
                      V+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 270 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 329

Query: 338 RGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 350
           RG+DVQQ               VSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINFV  
Sbjct: 330 RGIDVQQ---------------VSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 389

[Close]

BLAST of Cp4.1LG03g04800 vs. TAIR 10
Match: AT1G54270.1 (eif4a-2 )

HSP 1 Score: 344.7 bits (883), Expect = 8.4e-95
Identity = 189/388 (48.71%), Postives = 239/388 (61.60%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD MG++++LLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 40  SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D +  + QAL+L+PTRELA Q EKV+ A+GDY  ++ H+C+GG SV ED R L+ GV 
Sbjct: 100 QLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVH 159

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQ----- 217
           VV GTPGRV DM++R++LR   IK+ +LDE+DEMLSRGFKDQIYD+++ LPP++Q     
Sbjct: 160 VVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219

Query: 218 ------------------------------------------------------------ 277
                                                                       
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279

Query: 278 -----------VEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
                      V+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339

Query: 338 RGLDVQQASYWFFYFIDLFQCVVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 350
           RG+DVQQ               VSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINFV  
Sbjct: 340 RGIDVQQ---------------VSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTL 399

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g04800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41380	1.8e-150	71.29	Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1	[more]
Q5VNM3	3.2e-147	67.85	Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX...	[more]
Q10I26	3.2e-147	67.85	Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX...	[more]
Q94A52	3.9e-145	68.45	Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q7ZVA6	1.6e-127	58.00	Eukaryotic initiation factor 4A-III OS=Danio rerio OX=7955 GN=eif4a3 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g04800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935146.1	2.97e-219	78.59	eukaryotic initiation factor 4A-3 [Cucurbita moschata] >XP_023528747.1 eukaryoti...	[more]
XP_022983495.1	1.21e-218	78.35	eukaryotic initiation factor 4A-3 [Cucurbita maxima] >KAG7018051.1 hypothetical ...	[more]
XP_022949081.1	1.40e-217	77.41	eukaryotic initiation factor 4A-3-like [Cucurbita moschata] >XP_022998447.1 euka...	[more]
XP_004148574.1	6.64e-216	76.71	eukaryotic initiation factor 4A-3 [Cucumis sativus] >KGN58518.1 hypothetical pro...	[more]
KAF4402988.1	7.20e-216	89.46	hypothetical protein G4B88_010440 [Cannabis sativa]	[more]

BLAST of Cp4.1LG03g04800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3Q9	1.44e-219	78.59	eukaryotic initiation factor 4A-3 OS=Cucurbita moschata OX=3662 GN=LOC111442104 ...	[more]
A0A6J1J605	5.84e-219	78.35	eukaryotic initiation factor 4A-3 OS=Cucurbita maxima OX=3661 GN=LOC111482085 PE...	[more]
A0A6J1K814	6.79e-218	77.41	eukaryotic initiation factor 4A-3-like OS=Cucurbita maxima OX=3661 GN=LOC1114930...	[more]
A0A6J1GB02	6.79e-218	77.41	eukaryotic initiation factor 4A-3-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0L9P0	3.21e-216	76.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G654480 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g04800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19760.1	2.8e-146	68.45	eukaryotic initiation factor 4A-III	[more]
AT1G51380.1	1.5e-115	55.28	DEA(D/H)-box RNA helicase family protein	[more]
AT3G13920.1	5.9e-96	49.23	eukaryotic translation initiation factor 4A1	[more]
AT3G13920.3	5.9e-96	49.23	eukaryotic translation initiation factor 4A1	[more]
AT1G54270.1	8.4e-95	48.71	eif4a-2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 214..310 e-value: 2.4E-24 score: 96.9
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 213..310 e-value: 1.6E-19 score: 70.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 179..349 score: 21.63789
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 56..237 e-value: 8.5E-35 score: 131.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 68..238 score: 19.116533
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 214..348 e-value: 1.6E-31 score: 111.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..213 e-value: 5.5E-50 score: 171.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 29..217
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 74..344
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 62..208 e-value: 8.1E-37 score: 126.7
None	No IPR available	PANTHER	PTHR47958:SF55	BNAC03G41130D PROTEIN	coord: 21..213 coord: 213..342
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 21..213 coord: 213..342
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 212..319 e-value: 1.81946E-44 score: 147.269
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 37..65 score: 10.86482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g04800.1	Cp4.1LG03g04800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding