Cp4.1LG03g04310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g04310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description40S ribosomal protein s2
LocationCp4.1LG03: 2411768 .. 2412490 (-)
RNA-Seq ExpressionCp4.1LG03g04310
SyntenyCp4.1LG03g04310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGCGAGGCGGATTTGGACGAGGTTTCGGCGGCAGAGGTCGCGGCGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATCGATACCCTCATTGGCCCTAGCCTTAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCGGATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGTTTGGTCTAACTTAAATGGTTACTCTATTCTCATAACTTCAGATTTTGGCTTTGTTCTACTAAAAATACGTTGA

mRNA sequence

ATGGCGGAGCGAGGCGGATTTGGACGAGGTTTCGGCGGCAGAGGTCGCGGCGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATCGATACCCTCATTGGCCCTAGCCTTAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCGGATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGTTTGGTCTAACTTAAATGGTTACTCTATTCTCATAACTTCAGATTTTGGCTTTGTTCTACTAAAAATACGTTGA

Coding sequence (CDS)

ATGGCGGAGCGAGGCGGATTTGGACGAGGTTTCGGCGGCAGAGGTCGCGGCGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATCGATACCCTCATTGGCCCTAGCCTTAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCGGATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGTTTGGTCTAACTTAAATGGTTACTCTATTCTCATAACTTCAGATTTTGGCTTTGTTCTACTAAAAATACGTTGA

Protein sequence

MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKVWSNLNGYSILITSDFGFVLLKIR
Homology
BLAST of Cp4.1LG03g04310 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.4e-101
Identity = 192/215 (89.30%), Postives = 203/215 (94.42%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 223

BLAST of Cp4.1LG03g04310 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 365.5 bits (937), Expect = 4.5e-100
Identity = 193/218 (88.53%), Postives = 202/218 (92.66%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 232

BLAST of Cp4.1LG03g04310 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 4.2e-98
Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231

BLAST of Cp4.1LG03g04310 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.2e-98
Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231

BLAST of Cp4.1LG03g04310 vs. ExPASy Swiss-Prot
Match: P31009 (40S ribosomal protein S2 OS=Drosophila melanogaster OX=7227 GN=RpS2 PE=1 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-85
Identity = 164/214 (76.64%), Postives = 187/214 (87.38%), Query Frame = 0

Query: 4   RGGFGRGFGGR-GRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 63
           R GF  GFG R GRGG  RGRG   R   +++ ++WVPVTKLGRLV+EGKI+SLE+IYL+
Sbjct: 8   RSGFRGGFGSRGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLY 67

Query: 64  SLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 123
           SLPIKE +IID  +G SLKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCS
Sbjct: 68  SLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 127

Query: 124 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 183
           KEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR++PAPRG GI
Sbjct: 128 KEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGI 187

Query: 184 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           V+A VPKK+L  AGIED +TS+RGST TLGNF K
Sbjct: 188 VSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAK 221

BLAST of Cp4.1LG03g04310 vs. NCBI nr
Match: XP_023522607.1 (40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418 bits (1075), Expect = 5.31e-146
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. NCBI nr
Match: XP_011652156.1 (40S ribosomal protein S2-4 [Cucumis sativus])

HSP 1 Score: 418 bits (1074), Expect = 7.54e-146
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. NCBI nr
Match: XP_038906344.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 418 bits (1074), Expect = 7.54e-146
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. NCBI nr
Match: XP_022935112.1 (40S ribosomal protein S2-4-like [Cucurbita moschata])

HSP 1 Score: 417 bits (1071), Expect = 2.16e-145
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. NCBI nr
Match: XP_008443195.1 (PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S ribosomal protein s2 [Cucumis melo subsp. melo] >KAA0053922.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa] >TYK25482.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1071), Expect = 2.16e-145
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. ExPASy TrEMBL
Match: A0A0A0LFC7 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=3 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 3.65e-146
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. ExPASy TrEMBL
Match: A0A5D3DPL0 (40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006280 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.05e-145
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. ExPASy TrEMBL
Match: E5GBY7 (40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.05e-145
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. ExPASy TrEMBL
Match: A0A6J1F4N7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.05e-145
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. ExPASy TrEMBL
Match: A0A1S3B7F9 (40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.05e-145
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 216

BLAST of Cp4.1LG03g04310 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-102
Identity = 192/215 (89.30%), Postives = 203/215 (94.42%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 223

BLAST of Cp4.1LG03g04310 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-101
Identity = 193/218 (88.53%), Postives = 202/218 (92.66%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 232

BLAST of Cp4.1LG03g04310 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-99
Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231

BLAST of Cp4.1LG03g04310 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-99
Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231

BLAST of Cp4.1LG03g04310 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-99
Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0

Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVK 217
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVK
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SCM32.4e-10189.3040S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1[more]
P496884.5e-10088.5340S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2[more]
Q8L8Y04.2e-9887.6140S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2[more]
Q93VB84.2e-9887.6140S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1[more]
P310091.8e-8576.6440S ribosomal protein S2 OS=Drosophila melanogaster OX=7227 GN=RpS2 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
XP_023522607.15.31e-146100.0040S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo][more]
XP_011652156.17.54e-14699.5440S ribosomal protein S2-4 [Cucumis sativus][more]
XP_038906344.17.54e-14699.5440S ribosomal protein S2-4-like [Benincasa hispida][more]
XP_022935112.12.16e-14599.5440S ribosomal protein S2-4-like [Cucurbita moschata][more]
XP_008443195.12.16e-14599.07PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S riboso... [more]
Match NameE-valueIdentityDescription
A0A0A0LFC73.65e-14699.54S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=... [more]
A0A5D3DPL01.05e-14599.0740S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
E5GBY71.05e-14599.0740S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A6J1F4N71.05e-14599.5440S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE... [more]
A0A1S3B7F91.05e-14599.0740S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
AT3G57490.11.7e-10289.30Ribosomal protein S5 family protein [more]
AT2G41840.13.2e-10188.53Ribosomal protein S5 family protein [more]
AT1G58983.13.0e-9987.61Ribosomal protein S5 family protein [more]
AT1G59359.13.0e-9987.61Ribosomal protein S5 family protein [more]
AT1G58380.13.0e-9987.61Ribosomal protein S5 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 37..142
e-value: 6.1E-56
score: 189.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR13718:SF102BNAA03G19630D PROTEINcoord: 3..217
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 76..145
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 163..216
e-value: 5.2E-18
score: 64.3
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 143..232
e-value: 4.0E-40
score: 137.8
IPR005711Ribosomal protein S5, eukaryotic/archaealTIGRFAMTIGR01020TIGR01020coord: 33..217
e-value: 2.3E-87
score: 289.9
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 80..144
e-value: 5.6E-30
score: 103.1
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 80..143
score: 22.755819
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 3..217
IPR018192Ribosomal protein S5, N-terminal, conserved sitePROSITEPS00585RIBOSOMAL_S5coord: 97..129
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 156..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g04310.1Cp4.1LG03g04310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding