Cp4.1LG03g02730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g02730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-CH-type domain-containing protein
Location	Cp4.1LG03: 432033 .. 435371 (+)
RNA-Seq Expression	Cp4.1LG03g02730
Synteny	Cp4.1LG03g02730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACAACTTCATATGTTTTTATATGAAGATTAGATGAGGAATTTATTGATAGCGACAAAATTAAGAAAAAGGGTAAGCGTCACTTTCTGAACCATTCCCGATCATCAAGTGTTTGATGAAAATGAAAGGGGTGATGAAGCAGCGTATGGAATCAACTGGGAACGTAGATTTTTGTGTATACTAGCGAACAGATCTTCCAGAACCTTCTTCTTTTTCTCTCTCTCTTTTTCACTTTTCCATTTTTTCTTTCATTTCTCCTCTCAATTCTCTAGTCACCCCCATACCACGTTTCTGCTCGTTTTTGCAGTCCTCACTTCCGTTCCTCAAGCCTTCCAACAGTGAGTGGCACCACACCTCTGTGCCTCTGTCTGCTGGACCATTGTTTTCTTCTTTACCAAATCCGCTATTGTTTTGACAGAGGAACCATGAATTCTATTCTAGCTTCCTCTTCTTCGTAAATTTTGGAGAAACTATTTGGAGCCCTCGACTGTTGGTTCTCTGATATGTGTCTGCCCTGTACTGGAAGTGTTTGTGAAACAGTTTTAGCTTGTGGGTTAAGAAAATGGCGCCTCCGGAAGTTTCCCAATCCCACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGGGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGCTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCTGGAATCCCAATCGAATTGGGCTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGTGAGTCTACTCCCTGTTCCCCATGGCTTCTGATTACTTTTTCACTCATGCTATGTTATGTTATGTTATGCTTGATAGTTCTTTGAGTACATATTTTCAGATTATTTTCTTGCGGCTCTACTCTAGCATGTTCTTGTGATAAGCATCTTCTAAGATAATCCTCATGGGGTACCACTATTCATTAATTTAAGGAGGCTTAAAGGAAAACTCTTTAGTGTAATGAGCTTGAAGTTGCAGATTAAAGAATGCTTACTTAGAGGGAGCGCTTAGACGAACAAAAAGAAATAGGAGTAAAGCAAAAGAAAGTGCATTACACTGATTATTCCTTCTTCCCTGTCCCTTTTCTGATGGCTTAGGAATCTCTCTCTCTTTGTCTCTTCGCCCCCTCTGTAAACTGGATACTCCATTTGCTAGTCTGAACCATGATTCAGTAGAAGTGGGGAAAGATTATGTTGATCACTCAACAGATCATAAAAGGATCTCTAGCTTAGTTTTCAGTTTTCCGAACTTTTCTAGTCACACAGTTAGCTCTTTCAGTTCCTTGATCTCATGAACGAACATATCCAAATGGTAGTTCATCTTGTGTCAACCAACTGTCAGTTCCCCCATTAGATAAATATATGGAACATGGAACTTGTTTCAGTACACTTCTCATGGATCTGATTCATGCCTTTGATCTAACTTTCCTTACAACTACAATAGTCTTTGTTTCGATCGGCTTGGTTGAATTTTGTATAAAAAAATGACATGTATGAAGAGCTTGAAGGCTGTCAAAATGTAAAGGATTAGGATAATACCATCTGTTGTGGAAGCAAGACGATGAATATTTGATTTGATGTTAAAAGTACTTTTCCAATGTCATGAATAGGATATGTCAGTACACATTTTGAAAAAGGGTTATTTGTTAATCACTGAGAAACGAACAGACGATATGTTCTTGCACTCTGCTCCGAATTCCACTGATAAGTGATTTGAAGACTCACAAAAAGGTTCCACAGTATTGTTCATGGACAGTGATTCTGAACATGGGTGATTACAGCCATCTTTAATCAACTATTGCTGGTGTGTGTTTCAATCAATGTCTTGTTAATTGGTGGTCTTACATTTGCTGCATTGCATGATAGATTTACATAATGTGATTTTTGTGTGCATATTTGTTCCTATGGCTACTTTATTTATTATTCCTAATCTTCTTGAGCCTTCTCATTAGGACATGTGAGATTTGCCATTCCATTGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCATCAACTCACCCATCAGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTGCTTGCTTGTATGGTATTTGCTTTTGTTGTATCTTGGCTGTTTCACTTCAATGTGCCCACGTAGCGAATCGGGGGACATCCGATCAAGGAACTTGCAGAAGTTGTAGCTGCAAAAGACCCTCCCCTCCAGAGAATTGCCTACAAAGTGTCCACATGTACCTCTCCCAACATTCTCCACAAGTTTTTCGCCGCACTATCATTCAGTTCCAAGTTACCGAGAAATGTGGTTCAGCAAGAACATGGTTGATGATTCTGAGTATTCCACTGGGCATCATCTTTCTCTATTCTTATTATGGATTTTCGATATGGTTTCTCTGGATGGTTTGTTGTTAAAAGTATTTAGTTATTGAGCGTTGATTGTGGCGAGATGTACAGGAGAAACACATGAACAAGCTCTGTGCTTTCTCAAGGTCCCATCTTTACAGTGAAATGAAGAGGTCATTGAAAATGATAAAAAAAGAGGCCAATCTTTTATTTGCTTAAACGAGGAGCAGGCAATTTCCTTGTGGATAAAAAACAGGAAGGTGAGCCCTCCTGGAGTCGGGGAAGACGAGGCGTGTATGGGACCTCTCTCTGTTGTCAAGTGCAAACAAAAATCTGTCAGGAAAACTCATGAAATTGTGGCGTGAAGGGCTGCCCTTTTATTGGAACACATCGATAACTACGAATCTGTACAAACTAAAGCGGCTTTATTTGGGACTTTTTGTTAACGCAGTTGTTGTTCAGAAAAAGAGGTGTTTCTTTCCAATTAAAATCTTGGGAGGCCTTGATTTTGATGGAAGAATCCCATATAGACTTGTCCTTATCTTTACCATTGTGAAACCAATATTCCTTCACAAAGAAGGTGACTAAGATTTACCTTACACTTCGATATTTGGTGAAATTAAATGCAGTGGGGTCTAATAAGGCTTGCATTATTAACATTTGTCTTCTTC

mRNA sequence

ACACAACTTCATATGTTTTTATATGAAGATTAGATGAGGAATTTATTGATAGCGACAAAATTAAGAAAAAGGGTAAGCGTCACTTTCTGAACCATTCCCGATCATCAAGTGTTTGATGAAAATGAAAGGGGTGATGAAGCAGCGTATGGAATCAACTGGGAACGTAGATTTTTGTGTATACTAGCGAACAGATCTTCCAGAACCTTCTTCTTTTTCTCTCTCTCTTTTTCACTTTTCCATTTTTTCTTTCATTTCTCCTCTCAATTCTCTAGTCACCCCCATACCACGTTTCTGCTCGTTTTTGCAGTCCTCACTTCCGTTCCTCAAGCCTTCCAACAGTGAGTGGCACCACACCTCTGTGCCTCTGTCTGCTGGACCATTGTTTTCTTCTTTACCAAATCCGCTATTGTTTTGACAGAGGAACCATGAATTCTATTCTAGCTTCCTCTTCTTCGTAAATTTTGGAGAAACTATTTGGAGCCCTCGACTGTTGGTTCTCTGATATGTGTCTGCCCTGTACTGGAAGTGTTTGTGAAACAGTTTTAGCTTGTGGGTTAAGAAAATGGCGCCTCCGGAAGTTTCCCAATCCCACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGGGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGCTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCTGGAATCCCAATCGAATTGGGCTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGACATGTGAGATTTGCCATTCCATTGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCATCAACTCACCCATCAGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTGCTTGCTTGTATGGTATTTGCTTTTGTTGTATCTTGGCTGTTTCACTTCAATGTGCCCACGTAGCGAATCGGGGGACATCCGATCAAGGAACTTGCAGAAGTTGTAGCTGCAAAAGACCCTCCCCTCCAGAGAATTGCCTACAAAGTGTCCACATGTACCTCTCCCAACATTCTCCACAAGTTTTTCGCCGCACTATCATTCAGTTCCAAGTTACCGAGAAATGTGGTTCAGCAAGAACATGGTTGATGATTCTGAGTATTCCACTGGGCATCATCTTTCTCTATTCTTATTATGGATTTTCGATATGGTTTCTCTGGATGGTTTGTTGTTAAAAGTATTTAGTTATTGAGCGTTGATTGTGGCGAGATGTACAGGAGAAACACATGAACAAGCTCTGTGCTTTCTCAAGGTCCCATCTTTACAGTGAAATGAAGAGGTCATTGAAAATGATAAAAAAAGAGGCCAATCTTTTATTTGCTTAAACGAGGAGCAGGCAATTTCCTTGTGGATAAAAAACAGGAAGGTGAGCCCTCCTGGAGTCGGGGAAGACGAGGCGTGTATGGGACCTCTCTCTGTTGTCAAGTGCAAACAAAAATCTGTCAGGAAAACTCATGAAATTGTGGCGTGAAGGGCTGCCCTTTTATTGGAACACATCGATAACTACGAATCTGTACAAACTAAAGCGGCTTTATTTGGGACTTTTTGTTAACGCAGTTGTTGTTCAGAAAAAGAGGTGTTTCTTTCCAATTAAAATCTTGGGAGGCCTTGATTTTGATGGAAGAATCCCATATAGACTTGTCCTTATCTTTACCATTGTGAAACCAATATTCCTTCACAAAGAAGGTGACTAAGATTTACCTTACACTTCGATATTTGGTGAAATTAAATGCAGTGGGGTCTAATAAGGCTTGCATTATTAACATTTGTCTTCTTC

Coding sequence (CDS)

ATGGCGCCTCCGGAAGTTTCCCAATCCCACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGGGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGCTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCTGGAATCCCAATCGAATTGGGCTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGACATGTGAGATTTGCCATTCCATTGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCATCAACTCACCCATCAGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTGCTTGCTTGTATGGTATTTGCTTTTGTTGTATCTTGGCTGTTTCACTTCAATGTGCCCACGTAG

Protein sequence

MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRFSFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNESNNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT

Homology

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BLAST of Cp4.1LG03g02730 vs. NCBI nr
Match: XP_023526520.1 (uncharacterized protein LOC111789997 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1192), Expect = 1.38e-164
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. NCBI nr
Match: KAG7017255.1 (hypothetical protein SDJN02_19118, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446 bits (1148), Expect = 7.04e-158
Identity = 223/231 (96.54%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVASDSRRVSSVS HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELTDQSNES
Sbjct: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNA STTA AAST PSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. NCBI nr
Match: XP_022934902.1 (uncharacterized protein LOC111441939 [Cucurbita moschata])

HSP 1 Score: 446 bits (1148), Expect = 7.04e-158
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSD DEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDPDEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVASDSRRVSSVS HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTTAVAAST PSD+QSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNASSTTAVAASTPPSDSQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. NCBI nr
Match: XP_022983479.1 (uncharacterized protein LOC111482069 [Cucurbita maxima])

HSP 1 Score: 446 bits (1147), Expect = 1.00e-157
Identity = 223/231 (96.54%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVA DSRRVSSV  HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVAPDSRRVSSVEVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIP+ELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPVELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTTAVAAST PSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNASSTTAVAASTPPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida])

HSP 1 Score: 411 bits (1057), Expect = 5.24e-144
Identity = 206/231 (89.18%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M P EVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FVSQP VGV SDSRRVSSVS  SVEVENENGI+EIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHSIA+NI+ PNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTT VAAS   SD+QSFWRGHRFLNFLLACMVFAFV+SWLFHFNVP+
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL
Match: A0A6J1F436 (uncharacterized protein LOC111441939 OS=Cucurbita moschata OX=3662 GN=LOC111441939 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 3.41e-158
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSD DEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDPDEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVASDSRRVSSVS HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTTAVAAST PSD+QSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNASSTTAVAASTPPSDSQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL
Match: A0A6J1J7I4 (uncharacterized protein LOC111482069 OS=Cucurbita maxima OX=3661 GN=LOC111482069 PE=4 SV=1)

HSP 1 Score: 446 bits (1147), Expect = 4.84e-158
Identity = 223/231 (96.54%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVA DSRRVSSV  HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVAPDSRRVSSVEVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIP+ELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPVELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTTAVAAST PSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT
Sbjct: 181 NNASSTTAVAASTPPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231

[Close]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 4.20e-143
Identity = 205/231 (88.74%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M P EVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FVSQP VGV SDSRRVSSVS  SVEVENENGI+EIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHSIA+NI+ PNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTT VAAS   SD+QSFW GHRFLNFLLACMVFAFV+SWLFHFNVP+
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 407 bits (1047), Expect = 8.48e-143
Identity = 204/231 (88.31%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M P EVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FVSQP VGV  DSRRVSSVS  SVEVENENGI+EIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180
           SGIPIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHSIA+NI+ PNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           NNASSTT VAAS   SD+ SFWRGHRFLNFLLACMVFAFV+SWLFHFNVP+
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL
Match: A0A6J1FUW7 (uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC111447072 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 5.08e-142
Identity = 203/232 (87.50%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPP+VSQS IDLEQG+HRRSVSGS+LSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  SFVSQPGVGVA-SDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQ 120
           +FVSQPGVGV  SDSRR+SS S  SVEVENENGI+EIKVHL KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNE 180
           ESGIPIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHS+A+NI+ PNEVE T+QSNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 231
           SNNASSTTAVAAS   SDT SFWRGHRFLNFLLACMVFAFV+SWLFHFNVP+
Sbjct: 181 SNNASSTTAVAASIPSSDTPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of Cp4.1LG03g02730 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 97/162 (59.88%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 70  VASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGIPIELGC 129
           +  D  R S+ S  SVE++ E G+ E  VHL++ ERDCRICH+ L++ + ESG+PIELGC
Sbjct: 42  IVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGC 101

Query: 130 SCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNESNNASSTTAV 189
           SCK DLA AHKHCAETWFKIKGNK CE+C SIA N+V   EVE  +  NE+N   + T  
Sbjct: 102 SCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLR 161

Query: 190 AASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 232
            +     + +SFW+GHRFLNFLLACMVFAFV+SWLFHFNVP+
Sbjct: 162 TSGPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Cp4.1LG03g02730 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 104/225 (46.22%), Postives = 134/225 (59.56%), Query Frame = 0


Query: 11  IDLEQGN----HRRSVSGSDLSADCSVYFSDA-DEGSCPSQFLSTNGGSYDEFRFSFVSQ 70
           IDLEQG     HRRS+ GSD+    SVY+SD  D  SC S F ST GGSY+         
Sbjct: 5   IDLEQGGAFGYHRRSLDGSDV----SVYYSDGEDVMSCYSYFYSTTGGSYEY-------- 64

Query: 71  PGVGVASDSRRVSSV-SAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGIP 130
                   SR+VSSV S  S E+++++         A  E+DCRICHLG+E++    G  
Sbjct: 65  ----EGDQSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GGGA 124

Query: 131 IELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNESNNAS 190
           IELGCSCKDDLAVAH+ CAETWFKIKG+KTCEIC S+A+N+   NE+  +          
Sbjct: 125 IELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELRNG 184

Query: 191 STTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNV 230
             TA       +  ++ W+  R +N +LACMVF F +SW+FHF+V
Sbjct: 185 EETAAGEGGGATVVENRWQPQRVVNLVLACMVFGFFISWIFHFHV 203

[Close]

BLAST of Cp4.1LG03g02730 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-40
Identity = 99/227 (43.61%), Postives = 123/227 (54.19%), Query Frame = 0


Query: 9   SHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC--PSQFLSTNGGSYDEFRFSFVSQP 68
           SHIDLE G+  R    SD+S +        D  SC     F S       EF  +     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----- 66

Query: 69  GVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGIPIE 128
                 D     SV++ S+                  E+DCRICHLGLES+  E G P+ 
Sbjct: 67  --DDLDDETDTESVASGSIR--------------GSPEKDCRICHLGLESSRHECGDPMV 126

Query: 129 LGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVE-PNEV-ELTDQSNESNNAS 188
           LGCSCKDDL   HK CA+TWFKIKGNKTCEIC SIAQN  +  NE+ + T ++N  +  +
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEA 186

Query: 189 STTAVAASTHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNVPT 232
             T    +T  SD +   RG+RFLNFLL CMV AFV+SW FHFN+P+
Sbjct: 187 GNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Cp4.1LG03g02730 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 71/158 (44.94%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 105 RDCRICHLGLESNSQES-------------------------------GIPIELGCSCKD 164
           RDCRICHL LE+N +                                 G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 165 DLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNESNNASSTTAVAA-- 224
           DL VAH  CAETWFKIKGN TCEIC ++A N+         +QSN  + AS+ +  AA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVA-------GEQSNPESTASTHSQAAAGQ 198

Query: 225 STHPSDTQSFWRGHRFLNFLLACMVFAFVVSWLFHFNV 230
           S   ++ +  W G   +NFLLA MVFAFVVSWLFHF V
Sbjct: 199 SLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Cp4.1LG03g02730 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.0e-19
Identity = 59/147 (40.14%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 9   SHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC--PSQFLSTNGGSYDEFRFSFVSQP 68
           SHIDLE G+  R    SD+S +        D  SC     F S       EF  +     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----- 66

Query: 69  GVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGIPIE 128
                 D     SV++ S+                  E+DCRICHLGLES+  E G P+ 
Sbjct: 67  --DDLDDETDTESVASGSIR--------------GSPEKDCRICHLGLESSRHECGDPMV 124

Query: 129 LGCSCKDDLAVAHKHCAETWFKIKGNK 154
           LGCSCKDDL   HK CA+TWFKIKGNK
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g02730 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g02730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526520.1	1.38e-164	100.00	uncharacterized protein LOC111789997 [Cucurbita pepo subsp. pepo]	[more]
KAG7017255.1	7.04e-158	96.54	hypothetical protein SDJN02_19118, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022934902.1	7.04e-158	96.97	uncharacterized protein LOC111441939 [Cucurbita moschata]	[more]
XP_022983479.1	1.00e-157	96.54	uncharacterized protein LOC111482069 [Cucurbita maxima]	[more]
XP_038904640.1	5.24e-144	89.18	uncharacterized protein LOC120090971 [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g02730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F436	3.41e-158	96.97	uncharacterized protein LOC111441939 OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J7I4	4.84e-158	96.54	uncharacterized protein LOC111482069 OS=Cucurbita maxima OX=3661 GN=LOC111482069...	[more]
A0A0A0LAC9	4.20e-143	88.74	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A1S3B5A7	8.48e-143	88.31	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A6J1FUW7	5.08e-142	87.50	uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]

BLAST of Cp4.1LG03g02730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.2e-52	59.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	1.1e-42	46.22	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	6.7e-40	43.61	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.4e-29	44.94	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	5.0e-19	40.14	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 106..159 e-value: 5.5E-18 score: 75.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 107..158 e-value: 9.6E-10 score: 38.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 99..165 score: 18.393656
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 93..167 e-value: 7.8E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 7..230
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 7..230
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 107..159 e-value: 3.371E-12 score: 57.7224
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g02730.1	Cp4.1LG03g02730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding