Cp4.1LG03g01240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g01240
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionhomeobox-leucine zipper protein ATHB-22-like
LocationCp4.1LG03: 1113229 .. 1115138 (-)
RNA-Seq ExpressionCp4.1LG03g01240
SyntenyCp4.1LG03g01240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAGCTGTCTCTCTCTCTCTACAAAATAACACTTTTCAACTCTGCTGACTCTCACCCTGAGCTGTAGCCCTAAATTTTCAACTGCCCTAAGCTCTCTCTCTCTCTCTCTCTCTCACTATTTGTAGTTCATTTCCCACTCTTACTTCCATCTTTCCATATTTTTCACAAATCTCATCTCTTTTTCTTTGTTATCTGATCGGAAAAGGTCATCTCCGGTCACCGGGAAATATGGAATGGGCCACCGGAAGTTTCAGACCCTTTCTTTCTCGGCCACCGGAATCTTCCTTTGGCTTTCTCTATAACTATAATCTTGAACAATATCAGGGTAATATTTCCACTTCATTTTAGGGTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAGATTTGATCTTTTGTTGTTTTGATTTGTAAAAAAACATACCCAGATCATAAAAATCAAATCTTTGCAGTTATTTAGGGTTTTTTATGACCATTTTCAAAAGAAGTTGCTGTCTTTGAACTAGAACTGTCATTAAACTCTCAGAAAGTGGAAGATCGTGAACAATTTGTGTTTTTTTGAAGCATTTCATGTTTTGGAAATTGATTCTCTTGCAGATCCATGCAGAATAGAGGGAAGAATGAAGAATGGGATGATTATCTCTTAGATCGTCTAAGATTAAAACAAAATTAAAATTGAAAATTTGTAGATATAGAAAGTTTGGTTTCTAAGAGAATTTGTATAATTTTCTCTCTGTGTGTTGCTTCCATGAGCAGGCATCGATGTGAAGCATTCGGCCATGGCGGGGACGTCTGAGACCGTGCTCCAAGGGCTGGTTCCAGGGATGGATATGAATAGCTATGGAAATTTGGATAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGAGTCGCTCGAACGTAGCTTCCAGGAGGAGATCAAGCTCGATCCCAATCGGAAGCAGAAGCTGTCGAAGGAGCTCGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTTCAGAACCGCCGTGCGAGGTGGAAGGCGAAGCAGCTCGAGCATCTCTACGATACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAGGAGGTAATCTTTCCTTAAGTTAGGGTAAATTGTGACAAATCTTGTGAAGATCTCAATTCAGGCTTTCATTTGTGGATTAGGGTTTTCTAAAAACTTCTATTTCTTGATTTTACGAACGTAATTATATCAATTTTAACCCTAAACGGAGACACGCTCGTAGGTAATAAAGCTGAGGAGTATGCTGAGAGAGCTTCAAGCTGCAAGGAACCAAGTATCGACGGTGTACACTGACTTGTCGGGCGAGGAGACGGTGGAAAGCACCTCCGTCGGAGCTGGCTGCTCGAGCAAGCCAAGAGCGGTGGCAACAGCAGCAGCAAACCAGTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACAGAGGAATACAACCCCATGTCTCCAACTTTCTGGGGCTCTCTGCCACCCACATATCATCCCCAGTAGGGTTGTTTGGTTTGGCTGTTGGGCTTGCTTTGGCCTTCTGTTTTTATCAGATTGTGAAGTGAGAGTTTAAATTAGGGTTTAGAGAATAGTGTTTGAAAGTTAACAGTTTCTAATATGATCAGTATTTCATGGGGTCTTGGGGTCTGTTTGGAGAGTTCAGATCATACCACCTCAAATCTGGTTTTAATTTTATACACAAAAGGGGAGCAAATGGAGATATTGATGTATGATTTTGTTAACAAAGAGTTGAGGTTATATGATCTGAACTTTCTGTGCTCATCTAACAAGATCCCACTTTAATAAATTGAATTCCTCTTTTATGTTCGCTAATTCATGATCATCTATATATGTTCAATGGTTCGGGT

mRNA sequence

TATAGCTGTCTCTCTCTCTCTACAAAATAACACTTTTCAACTCTGCTGACTCTCACCCTGAGCTGTAGCCCTAAATTTTCAACTGCCCTAAGCTCTCTCTCTCTCTCTCTCTCTCACTATTTGTAGTTCATTTCCCACTCTTACTTCCATCTTTCCATATTTTTCACAAATCTCATCTCTTTTTCTTTGTTATCTGATCGGAAAAGGTCATCTCCGGTCACCGGGAAATATGGAATGGGCCACCGGAAGTTTCAGACCCTTTCTTTCTCGGCCACCGGAATCTTCCTTTGGCTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATCGATGTGAAGCATTCGGCCATGGCGGGGACGTCTGAGACCGTGCTCCAAGGGCTGGTTCCAGGGATGGATATGAATAGCTATGGAAATTTGGATAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGAGTCGCTCGAACGTAGCTTCCAGGAGGAGATCAAGCTCGATCCCAATCGGAAGCAGAAGCTGTCGAAGGAGCTCGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTTCAGAACCGCCGTGCGAGGTGGAAGGCGAAGCAGCTCGAGCATCTCTACGATACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAGGAGGTAATAAAGCTGAGGAGTATGCTGAGAGAGCTTCAAGCTGCAAGGAACCAAGTATCGACGGTGTACACTGACTTGTCGGGCGAGGAGACGGTGGAAAGCACCTCCGTCGGAGCTGGCTGCTCGAGCAAGCCAAGAGCGGTGGCAACAGCAGCAGCAAACCAGTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACAGAGGAATACAACCCCATGTCTCCAACTTTCTGGGGCTCTCTGCCACCCACATATCATCCCCAGTAGGGTTGTTTGGTTTGGCTGTTGGGCTTGCTTTGGCCTTCTGTTTTTATCAGATTGTGAAGTGAGAGTTTAAATTAGGGTTTAGAGAATAGTGTTTGAAAGTTAACAGTTTCTAATATGATCAGTATTTCATGGGGTCTTGGGGTCTGTTTGGAGAGTTCAGATCATACCACCTCAAATCTGGTTTTAATTTTATACACAAAAGGGGAGCAAATGGAGATATTGATGTATGATTTTGTTAACAAAGAGTTGAGGTTATATGATCTGAACTTTCTGTGCTCATCTAACAAGATCCCACTTTAATAAATTGAATTCCTCTTTTATGTTCGCTAATTCATGATCATCTATATATGTTCAATGGTTCGGGT

Coding sequence (CDS)

ATGGAATGGGCCACCGGAAGTTTCAGACCCTTTCTTTCTCGGCCACCGGAATCTTCCTTTGGCTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATCGATGTGAAGCATTCGGCCATGGCGGGGACGTCTGAGACCGTGCTCCAAGGGCTGGTTCCAGGGATGGATATGAATAGCTATGGAAATTTGGATAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGAGTCGCTCGAACGTAGCTTCCAGGAGGAGATCAAGCTCGATCCCAATCGGAAGCAGAAGCTGTCGAAGGAGCTCGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTTCAGAACCGCCGTGCGAGGTGGAAGGCGAAGCAGCTCGAGCATCTCTACGATACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAGGAGGTAATAAAGCTGAGGAGTATGCTGAGAGAGCTTCAAGCTGCAAGGAACCAAGTATCGACGGTGTACACTGACTTGTCGGGCGAGGAGACGGTGGAAAGCACCTCCGTCGGAGCTGGCTGCTCGAGCAAGCCAAGAGCGGTGGCAACAGCAGCAGCAAACCAGTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACAGAGGAATACAACCCCATGTCTCCAACTTTCTGGGGCTCTCTGCCACCCACATATCATCCCCAGTAG

Protein sequence

MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNSYGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRAVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Homology
[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 105/199 (52.76%), Postives = 131/199 (65.83%), Query Frame = 0 

Query: 1   MEWATGS----FRPFLSRPP---ESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLV 60
           MEW+T S     R     PP    SSF  L+++N + Y G    +S   G ++T     V
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAG----NSYTPGDTQTGPVISV 60

Query: 61  PGMD--MNSY------GNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPR 120
           P  +  MN+Y        + KKKRL+S QL SLERSFQEEIKLD +RK KLS+ELGLQPR
Sbjct: 61  PESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPR 120

Query: 121 QIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQV 180
           QIAVWFQNRRARWKAKQLE LYD+L+QE+D +SREK  L +EV KLR++LR+    + Q+
Sbjct: 121 QIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQI 180

Query: 181 STVYTDLSGEE-TVESTSV 184
           S     +SGEE TVE +SV
Sbjct: 181 SAGTIKVSGEEDTVEISSV 195

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-32
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 0 

Query: 26  YNLEQYQGIDVKH--SAMAGTSETVLQGLVP--------GMDMNSY-GNLDKKKRLSSEQ 85
           YN + + G         M G  + +L   VP        G + NS+ G   KKK+++SEQ
Sbjct: 22  YNFDHFSGNQDNRCLGTMMGAQQDILH--VPLAMVESGYGEESNSFNGQEKKKKKMTSEQ 81

Query: 86  LESLERSFQEEI--------KLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHL 145
           L+ LERSFQEEI        KL+P+RK KLSKELGLQPRQIAVWFQNR+ARWK KQLEHL
Sbjct: 82  LKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHL 141

Query: 146 YDTLKQEFDAISREKHKLQEEVIKLRSMLRE 158
           Y++L+QEFD +SREK  LQEE+I+L+SM+RE
Sbjct: 142 YESLRQEFDIVSREKELLQEELIQLKSMIRE 170

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.2e-22
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0 

Query: 65  DKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 124
           +KK+RL  EQ+++LE++F+ + KL+P RK KL++ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 71  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

Query: 125 HLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARN 164
             Y  LK  FDA+ R +  LQ +   L   ++EL+A  N
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN 169

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 0 

Query: 65  DKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 124
           +KK+RL+ EQ+  LERSF+EE KL+P RK +L+++LGLQPRQ+AVWFQNRRARWK KQLE
Sbjct: 78  EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLE 137

Query: 125 HLYDTLKQEFDAIS-------REKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEET 184
             +D LK  FDA+        ++ H+L  +V+ L   L+E +      +    D+ G   
Sbjct: 138 RDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPA 197

Query: 185 VESTSVGAGCSSKPRAVATAAA 200
                V    + +P     AAA
Sbjct: 198 AADVKVAVPDAEEPALEEAAAA 219

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 0 

Query: 65  DKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 124
           +KK+RL+ EQ+  LERSF+EE KL+P RK +L+++LGLQPRQ+AVWFQNRRARWK KQLE
Sbjct: 76  EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLE 135

Query: 125 HLYDTLKQEFDAIS-------REKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEET 184
             +D LK  FDA+        ++ H+L  +V+ L   L+E +      +    D+ G   
Sbjct: 136 RDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPA 195

Query: 185 VESTSVGAGCSSKPRAVATAAA 200
                V    + +P     AAA
Sbjct: 196 AADVKVAVPDAEEPALEEAAAA 217

[Close]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match: XP_023527805.1 (homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464 bits (1193), Expect = 1.43e-164
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPRAVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Sbjct: 181 TSVGAGCSSKPRAVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236

[Close]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match: XP_022935192.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita moschata])

HSP 1 Score: 457 bits (1176), Expect = 6.21e-162
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKL+SMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA---NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPRAVATAAA   NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Sbjct: 181 TSVGAGCSSKPRAVATAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 239

[Close]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match: XP_022983084.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima] >XP_022983085.1 homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima])

HSP 1 Score: 457 bits (1175), Expect = 1.02e-161
Identity = 236/243 (97.12%), Postives = 236/243 (97.12%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA-------NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY 236
           TSVGAGCSSKPRAVATAAA       NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY
Sbjct: 181 TSVGAGCSSKPRAVATAAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY 240

[Close]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match: KAG6580652.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1174), Expect = 1.25e-161
Identity = 235/239 (98.33%), Postives = 235/239 (98.33%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA---NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPRAVA AAA   NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Sbjct: 181 TSVGAGCSSKPRAVAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 239

[Close]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match: KAG7017408.1 (putative homeobox-leucine zipper protein ATHB-51 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456 bits (1173), Expect = 1.85e-161
Identity = 235/240 (97.92%), Postives = 235/240 (97.92%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA----NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPRAVA AAA    NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Sbjct: 181 TSVGAGCSSKPRAVAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 240

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match: A0A6J1F4W2 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LOC111442145 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 3.01e-162
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKL+SMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA---NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPRAVATAAA   NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ
Sbjct: 181 TSVGAGCSSKPRAVATAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 239

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match: A0A6J1J4Q7 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC111481737 PE=4 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 4.94e-162
Identity = 236/243 (97.12%), Postives = 236/243 (97.12%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPRAVATAAA-------NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY 236
           TSVGAGCSSKPRAVATAAA       NQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY
Sbjct: 181 TSVGAGCSSKPRAVATAAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY 240

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match: A0A6J1L311 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC111498652 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 2.74e-151
Identity = 219/238 (92.02%), Postives = 230/238 (96.64%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPF+SR PESSFGFLYNYNLEQYQGIDVKHSAMAG SETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNL+KKKRLSSEQL+SLE+SFQEEIKLDP+RKQKL+KELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEV+KL+SMLRELQ ARNQVSTVYT+LSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPRA--VATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKP A  VA AAANQYPTPPEQCNYVFNTEEYNPMSPTFWG+LP +YHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAEAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match: A0A0A0LED8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 4.18e-151
Identity = 220/240 (91.67%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPF+SR PESSFGFLYNYNLEQ+QG+DVKHSAMAG SETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQFQGVDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNL+KKKRLSSEQLESLERSFQEEIKLDP+RKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEV+KL+SMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPR----AVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPR    A A AAAN Y TPPEQCNYVFNTEEYNPMSP FWGSLP +YHPQ
Sbjct: 181 TSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match: A0A1S3B777 (homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486558 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 4.18e-151
Identity = 220/240 (91.67%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60
           MEWATGSFRPF+SR PESSFGFLYNYNLEQ+QG+DVKHSAMAG SETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQFQGVDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120
           YGNL+KKKRLSSEQLESLERSFQEEIKLDP+RKQKLSKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEEV+KL+SMLRELQAARNQVSTVYTDLSGEETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPR----AVATAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 236
           TSVGAGCSSKPR    A A AAAN Y TPPEQCNYVFNTEEYNPMSP FWGSLP +YHPQ
Sbjct: 181 TSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 105/199 (52.76%), Postives = 131/199 (65.83%), Query Frame = 0 

Query: 1   MEWATGS----FRPFLSRPP---ESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLV 60
           MEW+T S     R     PP    SSF  L+++N + Y G    +S   G ++T     V
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAG----NSYTPGDTQTGPVISV 60

Query: 61  PGMD--MNSY------GNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPR 120
           P  +  MN+Y        + KKKRL+S QL SLERSFQEEIKLD +RK KLS+ELGLQPR
Sbjct: 61  PESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPR 120

Query: 121 QIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQV 180
           QIAVWFQNRRARWKAKQLE LYD+L+QE+D +SREK  L +EV KLR++LR+    + Q+
Sbjct: 121 QIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQI 180

Query: 181 STVYTDLSGEE-TVESTSV 184
           S     +SGEE TVE +SV
Sbjct: 181 SAGTIKVSGEEDTVEISSV 195

[Close]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 )

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 0 

Query: 26  YNLEQYQGIDVKH--SAMAGTSETVLQGLVP--------GMDMNSY-GNLDKKKRLSSEQ 85
           YN + + G         M G  + +L   VP        G + NS+ G   KKK+++SEQ
Sbjct: 22  YNFDHFSGNQDNRCLGTMMGAQQDILH--VPLAMVESGYGEESNSFNGQEKKKKKMTSEQ 81

Query: 86  LESLERSFQEEI--------KLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHL 145
           L+ LERSFQEEI        KL+P+RK KLSKELGLQPRQIAVWFQNR+ARWK KQLEHL
Sbjct: 82  LKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHL 141

Query: 146 YDTLKQEFDAISREKHKLQEEVIKLRSMLRE 158
           Y++L+QEFD +SREK  LQEE+I+L+SM+RE
Sbjct: 142 YESLRQEFDIVSREKELLQEELIQLKSMIRE 170

[Close]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-23
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0 

Query: 65  DKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 124
           +KK+RL  EQ+++LE++F+ + KL+P RK KL++ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 71  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

Query: 125 HLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARN 164
             Y  LK  FDA+ R +  LQ +   L   ++EL+A  N
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN 169

[Close]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-23
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0 

Query: 65  DKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLE 124
           +KK+RL  EQ+++LE++F+ + KL+P RK KL++ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 53  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 112

Query: 125 HLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARN 164
             Y  LK  FDA+ R +  LQ +   L   ++EL+A  N
Sbjct: 113 RDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN 151

[Close]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22
Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 0 

Query: 62  GNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAK 121
           G  +KK+RLS  Q+++LE++F+ E KL+P RK KL++ELGLQPRQ+AVWFQNRRARWK K
Sbjct: 58  GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 117

Query: 122 QLEH-------LYDTLKQEFDAISREKHKLQEEVIKLRSML-----RELQAARNQVSTVY 177
           QLE         YD+L+  FD++ R+   L +E+ KL++ L      E +   N   T  
Sbjct: 118 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTE 177

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g01240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LZR01.6e-3852.76Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702... [more]
Q4PSR75.1e-3254.97Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
P466678.2e-2253.54Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5... [more]
A2X9801.1e-2142.96Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q6YWR41.1e-2142.96Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
BLAST of Cp4.1LG03g01240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023527805.11.43e-164100.00homeobox-leucine zipper protein ATHB-22-like isoform X1 [Cucurbita pepo subsp. p... [more]
XP_022935192.16.21e-16298.33homeobox-leucine zipper protein ATHB-22-like [Cucurbita moschata][more]
XP_022983084.11.02e-16197.12homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima] >XP_022983085.1 ... [more]
KAG6580652.11.25e-16198.33putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperm... [more]
KAG7017408.11.85e-16197.92putative homeobox-leucine zipper protein ATHB-51 [Cucurbita argyrosperma subsp. ... [more]
BLAST of Cp4.1LG03g01240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F4W23.01e-16298.33homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1J4Q74.94e-16297.12homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1L3112.74e-15192.02homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A0A0LED84.18e-15191.67Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE... [more]
A0A1S3B7774.18e-15191.67homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 ... [more]
BLAST of Cp4.1LG03g01240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G03790.11.2e-3952.76homeobox 51 [more]
AT2G36610.13.6e-3354.97homeobox protein 22 [more]
AT5G65310.15.8e-2353.54homeobox protein 5 [more]
AT5G65310.25.8e-2353.54homeobox protein 5 [more]
AT2G22430.14.9e-2246.46homeobox protein 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..164
NoneNo IPR availableGENE3D1.10.10.60coord: 60..135
e-value: 2.7E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR24326:SF556HOMEOBOX LEUCINE ZIPPER PROTEINcoord: 1..220
NoneNo IPR availablePANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 1..220
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 101..117
score: 55.68
coord: 92..101
score: 38.74
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 65..125
e-value: 8.2E-17
score: 71.8
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 66..119
e-value: 2.4E-17
score: 62.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 61..121
score: 16.940708
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 66..122
e-value: 1.3396E-16
score: 69.5796
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 121..155
e-value: 1.8E-8
score: 34.4
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 96..119
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 55..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g01240.1Cp4.1LG03g01240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding