Cp4.1LG03g00950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g00950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionSolute carrier family 35 member F2-like
LocationCp4.1LG03: 1338675 .. 1339061 (+)
RNA-Seq ExpressionCp4.1LG03g00950
SyntenyCp4.1LG03g00950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTGAAGCTCCGCCGTATTTACCACCGACCATCGGCATCCATGGCCTCCAGCGGAGTTCCGGTGGAAATCGAAGAAGACGACGAACTCTTCGAGATCGATCTCGAGGCCGTTAACAGCATTATTTCTCCGCGGCATTTCTGCGAGGATACTTACGGTTTCTTCACGGCCACCGGCGGTGCCGCGCTTCTCGCCAACTGTCTGCTTCCGATCTCCGATTTGTCCAATGCCGTTCCGATGGCCGATTCCGCCGATTTTGAGATGTTTCCATTTGCAACGCCACCGGAGCCGACGCGTCTGGAGAAGGCTTTTCAGTTGCCGCTGGGTTTTGGCCTTCGTCAGGCTTTGATTAATCGATCGGAGATGAAGTTAAGCAGTGGATGA

mRNA sequence

ATGAGGTTGAAGCTCCGCCGTATTTACCACCGACCATCGGCATCCATGGCCTCCAGCGGAGTTCCGGTGGAAATCGAAGAAGACGACGAACTCTTCGAGATCGATCTCGAGGCCGTTAACAGCATTATTTCTCCGCGGCATTTCTGCGAGGATACTTACGGTTTCTTCACGGCCACCGGCGGTGCCGCGCTTCTCGCCAACTGTCTGCTTCCGATCTCCGATTTGTCCAATGCCGTTCCGATGGCCGATTCCGCCGATTTTGAGATGTTTCCATTTGCAACGCCACCGGAGCCGACGCGTCTGGAGAAGGCTTTTCAGTTGCCGCTGGGTTTTGGCCTTCGTCAGGCTTTGATTAATCGATCGGAGATGAAGTTAAGCAGTGGATGA

Coding sequence (CDS)

ATGAGGTTGAAGCTCCGCCGTATTTACCACCGACCATCGGCATCCATGGCCTCCAGCGGAGTTCCGGTGGAAATCGAAGAAGACGACGAACTCTTCGAGATCGATCTCGAGGCCGTTAACAGCATTATTTCTCCGCGGCATTTCTGCGAGGATACTTACGGTTTCTTCACGGCCACCGGCGGTGCCGCGCTTCTCGCCAACTGTCTGCTTCCGATCTCCGATTTGTCCAATGCCGTTCCGATGGCCGATTCCGCCGATTTTGAGATGTTTCCATTTGCAACGCCACCGGAGCCGACGCGTCTGGAGAAGGCTTTTCAGTTGCCGCTGGGTTTTGGCCTTCGTCAGGCTTTGATTAATCGATCGGAGATGAAGTTAAGCAGTGGATGA

Protein sequence

MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG
Homology
BLAST of Cp4.1LG03g00950 vs. NCBI nr
Match: XP_022935370.1 (uncharacterized protein LOC111442274 [Cucurbita moschata])

HSP 1 Score: 255 bits (652), Expect = 1.22e-85
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG 60
           MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG
Sbjct: 1   MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG 60

Query: 61  GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR 120
           GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR
Sbjct: 61  GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR 120

Query: 121 SEMKLSSG 128
           SEMKLSSG
Sbjct: 121 SEMKLSSG 128

BLAST of Cp4.1LG03g00950 vs. NCBI nr
Match: XP_023529132.1 (uncharacterized protein LOC111791865 [Cucurbita pepo subsp. pepo] >KAG6580690.1 hypothetical protein SDJN03_20692, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017447.1 hypothetical protein SDJN02_19312, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (577), Expect = 2.06e-74
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 16  MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 75
           MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL
Sbjct: 1   MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 60

Query: 76  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 128
           SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG
Sbjct: 61  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Cp4.1LG03g00950 vs. NCBI nr
Match: XP_022983162.1 (uncharacterized protein LOC111481795 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 1.63e-71
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0

Query: 16  MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 75
           MASSGVPVEIEEDDELFEIDLEAVNSIISPRHF EDTY FFTATGGAALLANCLLPISDL
Sbjct: 1   MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFSEDTYCFFTATGGAALLANCLLPISDL 60

Query: 76  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 128
           SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG
Sbjct: 61  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Cp4.1LG03g00950 vs. NCBI nr
Match: XP_038906322.1 (uncharacterized protein LOC120092165 [Benincasa hispida])

HSP 1 Score: 149 bits (377), Expect = 6.42e-44
Identity = 77/112 (68.75%), Postives = 89/112 (79.46%), Query Frame = 0

Query: 16  MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 75
           MAS+GVPVEIEEDDELFEIDL+ VN+IISP H  +DTYGFF A GG  LLANCLLPI+D+
Sbjct: 1   MASAGVPVEIEEDDELFEIDLDTVNNIISPSHSSDDTYGFFRAAGGTTLLANCLLPITDV 60

Query: 76  SNAVPMADSADF-EMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLS 126
           SNA+PM DS    EM  FA PP+PT LE   QL LGFGLR+ALI+  EMK++
Sbjct: 61  SNAIPMGDSNKCSEMSLFAMPPKPTHLETVLQLLLGFGLRRALIDCLEMKIT 112

BLAST of Cp4.1LG03g00950 vs. NCBI nr
Match: XP_008442832.1 (PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo] >KAA0043891.1 uncharacterized protein E6C27_scaffold236G002270 [Cucumis melo var. makuwa] >TYK25246.1 uncharacterized protein E5676_scaffold352G003790 [Cucumis melo var. makuwa])

HSP 1 Score: 146 bits (368), Expect = 1.50e-42
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0

Query: 16  MASSGVP-VEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 75
           MAS  VP VEIEEDD+LFEIDLEAVNSI SP +F +D  GFFT  GGA LLANCLLPI+D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 76  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSS 127
           +SNAVP+ DS + E+F FA P EPT LEKA +LPLG GL +ALI+  EMK++S
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITS 113

BLAST of Cp4.1LG03g00950 vs. ExPASy TrEMBL
Match: A0A6J1FAF9 (uncharacterized protein LOC111442274 OS=Cucurbita moschata OX=3662 GN=LOC111442274 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 5.92e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG 60
           MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG
Sbjct: 1   MRLKLRRIYHRPSASMASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATG 60

Query: 61  GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR 120
           GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR
Sbjct: 61  GAALLANCLLPISDLSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINR 120

Query: 121 SEMKLSSG 128
           SEMKLSSG
Sbjct: 121 SEMKLSSG 128

BLAST of Cp4.1LG03g00950 vs. ExPASy TrEMBL
Match: A0A6J1IYI1 (uncharacterized protein LOC111481795 OS=Cucurbita maxima OX=3661 GN=LOC111481795 PE=4 SV=1)

HSP 1 Score: 219 bits (558), Expect = 7.87e-72
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0

Query: 16  MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 75
           MASSGVPVEIEEDDELFEIDLEAVNSIISPRHF EDTY FFTATGGAALLANCLLPISDL
Sbjct: 1   MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFSEDTYCFFTATGGAALLANCLLPISDL 60

Query: 76  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 128
           SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG
Sbjct: 61  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Cp4.1LG03g00950 vs. ExPASy TrEMBL
Match: A0A5A7TQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003790 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 7.29e-43
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0

Query: 16  MASSGVP-VEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 75
           MAS  VP VEIEEDD+LFEIDLEAVNSI SP +F +D  GFFT  GGA LLANCLLPI+D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 76  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSS 127
           +SNAVP+ DS + E+F FA P EPT LEKA +LPLG GL +ALI+  EMK++S
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITS 113

BLAST of Cp4.1LG03g00950 vs. ExPASy TrEMBL
Match: A0A1S3B7E8 (uncharacterized protein LOC103486601 OS=Cucumis melo OX=3656 GN=LOC103486601 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 7.29e-43
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0

Query: 16  MASSGVP-VEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 75
           MAS  VP VEIEEDD+LFEIDLEAVNSI SP +F +D  GFFT  GGA LLANCLLPI+D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 76  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSS 127
           +SNAVP+ DS + E+F FA P EPT LEKA +LPLG GL +ALI+  EMK++S
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITS 113

BLAST of Cp4.1LG03g00950 vs. ExPASy TrEMBL
Match: A0A0A0LEJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776340 PE=4 SV=1)

HSP 1 Score: 145 bits (367), Expect = 1.00e-42
Identity = 75/112 (66.96%), Postives = 89/112 (79.46%), Query Frame = 0

Query: 16  MASSGVPVEIEEDDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISDL 75
           MAS   P+EIEEDD+LFEIDLEAVNSIISP +F +DT GFFT  G   LLANCLLPI+D+
Sbjct: 1   MASGIDPLEIEEDDDLFEIDLEAVNSIISPPNFSDDTCGFFTTAGDTTLLANCLLPITDV 60

Query: 76  SNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSS 127
           S+AVP+ DS + E+F FA P EPT LEKA QLPLGF L +ALI+  EMK++S
Sbjct: 61  SSAVPVGDSNECEIFLFAMPSEPTHLEKALQLPLGFELHRALIDCLEMKITS 112

BLAST of Cp4.1LG03g00950 vs. TAIR 10
Match: AT2G36295.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 24 EIEEDDELFEIDLEAV-NSIISPRHFCEDTYGFFTATGGAALLANCLLPISDLSNAVP 81
          E + +D+LFEI+LEAV ++  SP + C+       A  G+ LLANCLLP +++SNAVP
Sbjct: 32 EEDGEDDLFEINLEAVSDTATSPPYDCQR----LPARTGSVLLANCLLPAAEISNAVP 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022935370.11.22e-85100.00uncharacterized protein LOC111442274 [Cucurbita moschata][more]
XP_023529132.12.06e-74100.00uncharacterized protein LOC111791865 [Cucurbita pepo subsp. pepo] >KAG6580690.1 ... [more]
XP_022983162.11.63e-7198.23uncharacterized protein LOC111481795 [Cucurbita maxima][more]
XP_038906322.16.42e-4468.75uncharacterized protein LOC120092165 [Benincasa hispida][more]
XP_008442832.11.50e-4268.14PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo] >KAA0043891.1 unc... [more]
Match NameE-valueIdentityDescription
A0A6J1FAF95.92e-86100.00uncharacterized protein LOC111442274 OS=Cucurbita moschata OX=3662 GN=LOC1114422... [more]
A0A6J1IYI17.87e-7298.23uncharacterized protein LOC111481795 OS=Cucurbita maxima OX=3661 GN=LOC111481795... [more]
A0A5A7TQP67.29e-4368.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B7E87.29e-4368.14uncharacterized protein LOC103486601 OS=Cucumis melo OX=3656 GN=LOC103486601 PE=... [more]
A0A0A0LEJ91.00e-4266.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776340 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G36295.12.7e-0648.28unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g00950.1Cp4.1LG03g00950.1mRNA