Cp4.1LG03g00590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g00590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionnudix hydrolase 26, chloroplastic-like
LocationCp4.1LG03: 1567590 .. 1571460 (+)
RNA-Seq ExpressionCp4.1LG03g00590
SyntenyCp4.1LG03g00590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTAATACCTTCAAAAGAAATCCAATATTTTATTGAAGGAAATCCCAATCCAATCCCCCCAACATGACACTACACATGAAAGAACAGAAGGAGCGAATGGTCATTTTGAATTGGACTATAAAGCGAATAATAAATTCCGGCTAAAATACAAATAAAGAGAAGAAATTTAATTGGGAGGAAAACCAACAACAATATTAATAATAATTATATCAATATTGAAAAAGCAGACTCTTCTTCTACTCCCACATCGTTAAACAAAAAAAAAAAAAGAAAAAAAAAAAACTCTTTCCTCCTTTTGGTCAAAATAGTCTCACAATTTTAAAGAAAATATTAGGTGGATGGTGGACCAACCTGCTGATTCTCTGTGATCAACGGCTACGATCCTTCCTCCTGAAGGGCCATTTGTAAGCCAATGGAAGAATTTGGTACACTCTTCTTACGGTGTACTCGACTTCACACGAATAATTCCCCCCTCCCCCCACCATTCCCTCTCCTTCCCTTCCACCTACTCTGTTACTTATTCACACGCACCGCACACAACGAGAAGACCAAAATAAGCTAATTCGGCTCGGATTCTTTTATGGGTCGAGCTATCGGACCAGCATGTGACCGGAATCCCGCCGTCACGGCATCGTTGGCGCAGCAGTGAAATCCAACTGCCACCCCGGTCTCTCTCGCACTCAGGCAGTCACGGCAGGCCGTCGTCTTCGATTTCGCAGTACCGTTCCAGCCACCGTCTCCGTCTCCGCCCACCGTCAGATTCCTTAGCCCTACCCTCGTTGAGTAGTTCTCCCTCTCCAATTGCAGCTTCCGAATTCGCTCTTCGTAATCGTATCGGTCCATCGCCGGCGAGATGAAGCCGGAGAGCATTTCGTTTTCAATGCCAGCGTTTCGTCTCAACAACATCACATTCTCCGGTGGATTCTTCTTATTCGGTTGATTCGTCTTTGCCCTCGTCTTCGTCGCTGACGGGAGGTAGTATTCGTCTTCGTTGTTGTCGGTAACCTTCCGCCTCCTCTCGCGTCTCGACCGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGACATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATTCCGATCATCTTGCTCAAATCCGACTGAAAATTCTTGAAATCCGTCAAAGAAGAAACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACGATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAGTGAATGAATTCTTGTTCAATTGCGGAACAGAAGAAAAAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGGTTTTTATGGTAAGAAGGAGAAGGCGGTGAGGGTATTTTAGGAATAAAATATCAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAGTAATTTCTCTTATCCTTCCTCGCCTTCTTCTTTCTCTCCCATCTTGTTTTCTTCTGTTGATGATAATTGTTTTCTGTCCATTTAATCTTTTGCAGATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGTAATTTCTATTCCGACGTATTTCCAACTTTATTCATTGGGAAACAGGAAAGCACCGTCTCGCTGCTTTATTCCGTGCGAATTAGGGCATATAATTTATAGGTTCCATCTCTGATTTCTTTGTGGGAATATCCGGAAATCCTTTTGAAGGGCTCCTCAGATTTTCTTACACGCGAGTGAGAAATTCGAGGATCCTCTCAAATGAGAAGGGGATTTGTGCAAAATTGAATCCATCTCTCTCGAATCTTCTCTTTGAACATATTCTTAGTGAAATTCTTGCAATGGCTAGAACATTTCAAGTGAAAATTCTTTCTATGCTGCCATGGTTTCTTTCCATTAGGGAACTGTATTACCTTTCAGAAATCTGTTTATGGTATTGATGGGAACATTGACAATTTTGTGTGTTTCTTATCTTTTCAATCATGAGACTGAGAGGTGTTAGAAATGATGTATTTCATCTACATCTGCATTGTATTGTATCCCTAAATGATATAGCCTTTATTACTGCCTCGCGGGGCTTGAAGGTAGTGGAGGATCCTTAGATTTGTTTTCCTTGAAAATGATTTGCCATCATACAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGGTATGCATTTGGAGATGCCTCCAGCTTCTATATCTCGTTTTTCTATAGAAAAATGAAATCCAGCTTCGTTGAAATCGGGACTGATTCGTTCTATGGTTAAATATATAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGATGTTAAGGAACCTCCTTTTTAAAACGTGTCTGGACAGAGTCGTGCATTCTTGGTATAATCTTCTTGTTTATCATTAAAGAACCTATTGCGTGCGTATTTGGTAACTGTTTTTCTTTTTTTTCTTCCTCGAAAACTTGATCAATGTTTAAGGATTATGTGTTATCCCCTTCAAGCTTCCATGTTGGTTTGATCGATCCTGAAGCTCGTGACAGGTTTCTAATGAAGTTCACCGGAAAAGAAGAAGAGATTAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTTATGGATGTCAATTGAACAGATTATGAACCAAGTGAGTAAATTTCTTGTTGCTTCATTCTTTGTCCTGCAATTTCTCTTACTTTCTTATAATCGTTTGAACAGACTGCCGATGTCCGGAAGCCTGTTTATGCACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGAGTGTGATGATGTTTCTTTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAGTGTTCAAATTCTGCTATGGGAAGAAGAAAATTTATATTCATTATTCATACCACAATCATTATACGTGTACCGTATGAATCACAGGTTCGTATAAAATGTTGTATTCTTGTATCTAACTCTTGTTGTTCAAACAAGAACGCCAAAATTTGAAGGTCTTGATAACTTTTGAGATAAGGCAGAATGTTTGATCCTTGTGGGATATGATGGACCATTGGTGGATTCATGTTCATATTTGAAATCTGAGGCAAAGATATGGGAATCAGAACCTTCACTAAATAATTTGTGCAGCTGTAAAAGGGTTTATTAGTCCAAATATGGGTTTGTAAATGATTTCCACGAGCTTGATTTTGACGCTCTTCTCCTTATTACCTTCGCTTTCTTGCTTGTAAGGCCACGTTTGGGGGAATGTGGATGAAGGCATTTTGATTCATAGAATGGAATCAGAACGTGGAATTCG

mRNA sequence

TTCTTAATACCTTCAAAAGAAATCCAATATTTTATTGAAGGAAATCCCAATCCAATCCCCCCAACATGACACTACACATGAAAGAACAGAAGGAGCGAATGGTCATTTTGAATTGGACTATAAAGCGAATAATAAATTCCGGCTAAAATACAAATAAAGAGAAGAAATTTAATTGGGAGGAAAACCAACAACAATATTAATAATAATTATATCAATATTGAAAAAGCAGACTCTTCTTCTACTCCCACATCGTTAAACAAAAAAAAAAAAAGAAAAAAAAAAAACTCTTTCCTCCTTTTGGTCAAAATAGTCTCACAATTTTAAAGAAAATATTAGGTGGATGGTGGACCAACCTGCTGATTCTCTGTGATCAACGGCTACGATCCTTCCTCCTGAAGGGCCATTTGTAAGCCAATGGAAGAATTTGGTACACTCTTCTTACGGTGTACTCGACTTCACACGAATAATTCCCCCCTCCCCCCACCATTCCCTCTCCTTCCCTTCCACCTACTCTGTTACTTATTCACACGCACCGCACACAACGAGAAGACCAAAATAAGCTAATTCGGCTCGGATTCTTTTATGGGTCGAGCTATCGGACCAGCATGTGACCGGAATCCCGCCGTCACGGCATCGTTGGCGCAGCAGTGAAATCCAACTGCCACCCCGGTCTCTCTCGCACTCAGGCAGTCACGGCAGGCCGTCGTCTTCGATTTCGCAGTACCGTTCCAGCCACCGTCTCCGTCTCCGCCCACCGTCAGATTCCTTAGCCCTACCCTCGTTGAGTAGTTCTCCCTCTCCAATTGCAGCTTCCGAATTCGCTCTTCGTAATCGTATCGGTCCATCGCCGGCGAGATGAAGCCGGAGAGCATTTCGTTTTCAATGCCAGCGTTTCGTCTCAACAACATCACATTCTCCGGTGGATTCTTCTTATTCGGTTGATTCGTCTTTGCCCTCGTCTTCGTCGCTGACGGGAGGTAGTATTCGTCTTCGTTGTTGTCGGTAACCTTCCGCCTCCTCTCGCGTCTCGACCGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGACATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATTCCGATCATCTTGCTCAAATCCGACTGAAAATTCTTGAAATCCGTCAAAGAAGAAACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACGATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAGTGAATGAATTCTTGTTCAATTGCGGAACAGAAGAAAAAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGGTTTTTATGGTAAGAAGGAGAAGGCGGTGAGGGTATTTTAGGAATAAAATATCAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGATGTTAAGGAACCTCCTTTTTAAAACGTGTCTGGACAGAGTCGTGCATTCTTGGTATAATCTTCTTGTTTATCATTAAAGAACCTATTGCGTGCGTATTTGGTAACTGTTTTTCTTTTTTTTCTTCCTCGAAAACTTGATCAATGTTTAAGGATTATGTGTTATCCCCTTCAAGCTTCCATGTTGGTTTGATCGATCCTGAAGCTCGTGACAGGTTTCTAATGAAGTTCACCGGAAAAGAAGAAGAGATTAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTTATGGATGTCAATTGAACAGATTATGAACCAAACTGCCGATGTCCGGAAGCCTGTTTATGCACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGAGTGTGATGATGTTTCTTTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAGTGTTCAAATTCTGCTATGGGAAGAAGAAAATTTATATTCATTATTCATACCACAATCATTATACGTGTACCGTATGAATCACAGGTTCGTATAAAATGTTGTATTCTTGTATCTAACTCTTGTTGTTCAAACAAGAACGCCAAAATTTGAAGGTCTTGATAACTTTTGAGATAAGGCAGAATGTTTGATCCTTGTGGGATATGATGGACCATTGGTGGATTCATGTTCATATTTGAAATCTGAGGCAAAGATATGGGAATCAGAACCTTCACTAAATAATTTGTGCAGCTGTAAAAGGGTTTATTAGTCCAAATATGGGTTTGTAAATGATTTCCACGAGCTTGATTTTGACGCTCTTCTCCTTATTACCTTCGCTTTCTTGCTTGTAAGGCCACGTTTGGGGGAATGTGGATGAAGGCATTTTGATTCATAGAATGGAATCAGAACGTGGAATTCG

Coding sequence (CDS)

ATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGA

Protein sequence

MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLLSF
Homology
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.8e-37
Identity = 81/147 (55.10%), Postives = 97/147 (65.99%), Query Frame = 0

Query: 3   ALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSS---SSMEFPPEGYRRNVGICL 62
           +++ F  N PS  I  SS P        C   R SSSS+   SSME PPEGYRRNVG+CL
Sbjct: 16  SVTTFLRNYPSKPIKFSSLPFLHR----CRKSRVSSSSARCCSSMESPPEGYRRNVGVCL 75

Query: 63  FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLS 122
            N S KIF ASRL+ P  W+MPQGG++EGED   A  REL EETGV SAEI+AE P+W++
Sbjct: 76  MNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWIT 135

Query: 123 YDFSPETSIKLSKHWGVRYKGQTQKWY 147
           YDF P+   KL   WG  +KGQ QKW+
Sbjct: 136 YDFPPDVREKLKVRWGSDWKGQAQKWF 158

BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0

Query: 38  SSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKR 97
           SS + ++E PP GYR+NVGICL +P  KIF AS+++ P+ W+MPQGG +EGEDL  AA R
Sbjct: 49  SSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFR 108

Query: 98  ELAEETGVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           EL EETGV SAE IAE+P WL+YDF  E   KL++ W   YKGQ QKW+
Sbjct: 109 ELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWF 157

BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.9e-31
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0

Query: 44  MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEET 103
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 104 GVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           GVVSAEI++E+P WL+YDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q2RV14 (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rppH PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 0

Query: 51  YRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEI 110
           YR+ VGI L N  G++F A RL+ PE W+MPQGG++ GED  TAA RE+ EE G  +A +
Sbjct: 14  YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALL 73

Query: 111 IAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           + E   WL YD   E   +L   WG R++GQ QKW+
Sbjct: 74  LGETAGWLGYDLPEELRGRL---WGGRFQGQRQKWF 106

BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q5FU29 (RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rppH PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 51  YRRNVGICLFNPSGKIFAASRLNRP-EVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAE 110
           YR NVGI LFN  GK+F A R + P +VW+ PQGG++EGE    AA RE+ EE G  +A 
Sbjct: 9   YRPNVGIALFNRDGKLFIARRTDLPGDVWQCPQGGIDEGETPQVAALREMGEEIGTQNAR 68

Query: 111 IIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           I+AE   WLSYD   +    + K  G R++GQTQKW+
Sbjct: 69  ILAERSGWLSYDLPSDL---IGKALGGRFRGQTQKWF 102

BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: KAG7017496.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323 bits (827), Expect = 3.67e-110
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 76  MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 135

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKREL EETGVVSAEIIAELPYWL+Y
Sbjct: 136 NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELTEETGVVSAEIIAELPYWLTY 195

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLL 154
           DFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLL
Sbjct: 196 DFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLL 229

BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_023528158.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305 bits (782), Expect = 1.46e-103
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: KAG6580744.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303 bits (775), Expect = 1.70e-102
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKREL EETGVVSAEIIAELPYWL+Y
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELTEETGVVSAEIIAELPYWLTY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_022935354.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 301 bits (771), Expect = 6.92e-102
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGED TTAAKREL EETGVVSAEIIAELPYWL+Y
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_022983100.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 300 bits (767), Expect = 2.81e-101
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDL TAAKREL EETGVVSAEII+ELPYWL+Y
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLNTAAKRELTEETGVVSAEIISELPYWLTY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1F566 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442265 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 3.35e-102
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGED TTAAKREL EETGVVSAEIIAELPYWL+Y
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1J4S6 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481747 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 1.36e-101
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSY 120
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDL TAAKREL EETGVVSAEII+ELPYWL+Y
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLNTAAKRELTEETGVVSAEIISELPYWLTY 120

Query: 121 DFSPETSIKLSKHWGVRYKGQTQKWY 146
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DB53 (nudix hydrolase 26, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 4.25e-81
Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSS-TPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 60
           MVAL VFGPN P +SI++SS TPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 61  FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLS 120
           FN SGKIFAASRLNRPE+WEMPQGGVNEGEDL  AA+REL EETGV+SAEI+AELPYWL+
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETGVISAEIVAELPYWLT 120

Query: 121 YDFSPETSIKLSKHWGVRYKGQTQKWY 146
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 145

BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DC58 (nudix hydrolase 26, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 9.45e-81
Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSS-TPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 60
           MVAL VFGPN P +SI++SS TPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 61  FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLS 120
           FN SGKIFAASRLNRPE+WEMPQGGVNEGEDL  AA+REL EETGV+SAEI+AELPYWL+
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETGVISAEIVAELPYWLT 120

Query: 121 YDFSPETSIKLSKHWGVRYKGQTQKWY 146
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 145

BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DD27 (nudix hydrolase 26, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 2.31e-72
Identity = 111/147 (75.51%), Postives = 121/147 (82.31%), Query Frame = 0

Query: 1   MVALSVFGPNCPSFSIDVSS-TPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 60
           MVAL VFGPN P +SI++SS TPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 61  FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLS 120
           FN SGKIFAASRLNRPE+WEMPQGGVNEGEDL  AA+REL EETG         LPYWL+
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETG---------LPYWLT 120

Query: 121 YDFSPETSIKLSKHWGVRYKGQTQKWY 146
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 136

BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT3G10620.1 (nudix hydrolase homolog 26 )

HSP 1 Score: 154.8 bits (390), Expect = 5.5e-38
Identity = 81/147 (55.10%), Postives = 97/147 (65.99%), Query Frame = 0

Query: 3   ALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSS---SSMEFPPEGYRRNVGICL 62
           +++ F  N PS  I  SS P        C   R SSSS+   SSME PPEGYRRNVG+CL
Sbjct: 16  SVTTFLRNYPSKPIKFSSLPFLHR----CRKSRVSSSSARCCSSMESPPEGYRRNVGVCL 75

Query: 63  FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLS 122
            N S KIF ASRL+ P  W+MPQGG++EGED   A  REL EETGV SAEI+AE P+W++
Sbjct: 76  MNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWIT 135

Query: 123 YDFSPETSIKLSKHWGVRYKGQTQKWY 147
           YDF P+   KL   WG  +KGQ QKW+
Sbjct: 136 YDFPPDVREKLKVRWGSDWKGQAQKWF 158

BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT5G06340.1 (nudix hydrolase homolog 27 )

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0

Query: 38  SSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKR 97
           SS + ++E PP GYR+NVGICL +P  KIF AS+++ P+ W+MPQGG +EGEDL  AA R
Sbjct: 49  SSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFR 108

Query: 98  ELAEETGVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           EL EETGV SAE IAE+P WL+YDF  E   KL++ W   YKGQ QKW+
Sbjct: 109 ELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWF 157

BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT1G30110.1 (nudix hydrolase homolog 25 )

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0

Query: 44  MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEET 103
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 104 GVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           GVVSAEI++E+P WL+YDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT1G30110.2 (nudix hydrolase homolog 25 )

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0

Query: 44  MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEET 103
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 104 GVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWY 147
           GVVSAEI++E+P WL+YDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT4G12720.1 (MutT/nudix family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.1e-04
Identity = 18/38 (47.37%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 77  VWEMPQGGVNEGEDLTTAAKRELAEETGVVS--AEIIA 113
           VW++P G +NEGED+ T   RE+ EETG+++   E++A
Sbjct: 133 VWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLA 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9CAF27.8e-3755.10Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1... [more]
Q9FNH41.8e-3359.63Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1... [more]
Q9C6Z24.9e-3158.25Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1[more]
Q2RV143.0e-2048.96RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1... [more]
Q5FU291.9e-1950.52RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpp... [more]
Match NameE-valueIdentityDescription
KAG7017496.13.67e-11098.70Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023528158.11.46e-10399.32nudix hydrolase 26, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
KAG6580744.11.70e-10297.95Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022935354.16.92e-10297.26nudix hydrolase 26, chloroplastic-like [Cucurbita moschata][more]
XP_022983100.12.81e-10196.58nudix hydrolase 26, chloroplastic-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1F5663.35e-10297.26nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1J4S61.36e-10196.58nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114817... [more]
A0A6J1DB534.25e-8180.27nudix hydrolase 26, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673... [more]
A0A6J1DC589.45e-8180.27nudix hydrolase 26, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673... [more]
A0A6J1DD272.31e-7275.51nudix hydrolase 26, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673... [more]
Match NameE-valueIdentityDescription
AT3G10620.15.5e-3855.10nudix hydrolase homolog 26 [more]
AT5G06340.11.3e-3459.63nudix hydrolase homolog 27 [more]
AT1G30110.13.5e-3258.25nudix hydrolase homolog 25 [more]
AT1G30110.23.5e-3258.25nudix hydrolase homolog 25 [more]
AT4G12720.13.1e-0447.37MutT/nudix family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020476NUDIX hydrolasePRINTSPR00502NUDIXFAMILYcoord: 78..92
score: 38.63
coord: 92..107
score: 47.83
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 40..151
e-value: 8.9E-32
score: 112.1
NoneNo IPR availablePANTHERPTHR11839:SF21NUDIX HYDROLASE 27, CHLOROPLASTIC-LIKEcoord: 32..147
NoneNo IPR availablePANTHERPTHR11839UDP/ADP-SUGAR PYROPHOSPHATASEcoord: 32..147
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 51..134
e-value: 2.5E-18
score: 66.4
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 50..156
score: 14.157676
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 83..104
IPR022927RNA pyrophosphohydrolase RppHCDDcd03671Ap4A_hydrolase_plant_likecoord: 50..147
e-value: 1.07432E-44
score: 141.959
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 45..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g00590.1Cp4.1LG03g00590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006753 nucleoside phosphate metabolic process
biological_process GO:0019693 ribose phosphate metabolic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity
molecular_function GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
molecular_function GO:0016787 hydrolase activity