Cp4.1LG03g00260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g00260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	40S ribosomal protein S5-like
Location	Cp4.1LG03: 1796915 .. 1798673 (-)
RNA-Seq Expression	Cp4.1LG03g00260
Synteny	Cp4.1LG03g00260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCTTCCGCAGAAATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTTTATTTTTTTTCCCTAATGCCCCGTTTTTTAGACTGATGTTTGTGGGAAGCAATTTTAGGTTAACTTTAAATTTTGCTATAATGGAAGAAGCTATTGATGGATTCACCTCTCACTCATAATGATTTCACAACTTTTTGCTTATCCTTATGATGCGGAGGAGTTGAAAACTGCGATCTGTTCGTATGGTTGTTGGGTTCTTTTTGTTTCCTGTTTGAATTGGGTTGTTAGGTGAAATCTCAATGCCATCGAGTTCCACTGATATGATTGAACGGTTGTGATTATACAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGGTATGCATATTGGATCCACGGAATTCCATTCATGTTGTGTTTAAGTTATGTTATACCATCGTAACTTTTAGGTCCAATTACAGATTTGGTATCTATGGTTTAGACAAGGTTTTAATTTAGTCTTTATGGTGTTAAAGATTCAATTTAGTCTCTATGGTTTAGACTTGGTTGCACTTTGGTATCTATGATTTGGGTTTAGTTCTAACTTTTAGTCCTTATGTTCTAAAACTTTCAATAGGATCCTACAATTTAGTCAAACCTCACAAATTGTCCTTGTTACAATGTTGACGAATATTTTCACATGAAAATTGGTAACTGTGTTTGGTTCTAACTTTTAGTGCACGACTTTATTGGACGAAATTCGTGATTTAAATATTGCATCTTGAATCAATGTCCGGAACAAAGATCATGGTAATTCTGCAATTTTTGAGTTTTCAGTTTCCTCTTAACATATTTTTTGACATGGGATTTGGCAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGGTAAACATCATATCTCCTCTTACTAATTTTTCATCCATCCTTGCACCATATTTCATTGTGTTATTCTGTTTTTGCAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAAGCGTAGTTCGACAAAGGAGAGAGAGCTCAAAGGATTCATCAAAAGCTTCATTTTCGGTTCATCATCTAGTTCAAAGTTTCTATGGACATTGTTGTCCTCAATGTTTTGTTTGCCTTATCTTAGCCAGCGAGAATTCATCATATACTTGATTAAGCCTTAATGAGAAGTCTTTATATTTGGTGAGAATCTTTGTCATATGGATATTTGTAATACTTTAATGTTTATTTATGGTTGCTTTTCAAAATTATTACATTAAAACTCCTTATTAGTTGAGCCTCCTC

mRNA sequence

TGTCTTCCGCAGAAATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAAGCGTAGTTCGACAAAGGAGAGAGAGCTCAAAGGATTCATCAAAAGCTTCATTTTCGGTTCATCATCTAGTTCAAAGTTTCTATGGACATTGTTGTCCTCAATGTTTTGTTTGCCTTATCTTAGCCAGCGAGAATTCATCATATACTTGATTAAGCCTTAATGAGAAGTCTTTATATTTGGTGAGAATCTTTGTCATATGGATATTTGTAATACTTTAATGTTTATTTATGGTTGCTTTTCAAAATTATTACATTAAAACTCCTTATTAGTTGAGCCTCCTC

Coding sequence (CDS)

ATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAA

Protein sequence

MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR

Homology

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-96
Identity = 179/192 (93.23%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 15  QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERL 74
           Q +VKLFNRW+FDDVQ++D+SL DYIGV P+KHATYVPHTAGRYS+KRFRKAQCPIVERL
Sbjct: 6   QIEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERL 65

Query: 75  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAG 134
           TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAG
Sbjct: 66  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAG 125

Query: 135 VVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKK 194
           VVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKK
Sbjct: 126 VVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKK 185

Query: 195 KDEIERVAKANR 207
           KDEIERVAKANR
Sbjct: 186 KDEIERVAKANR 197

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.8e-96
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA + E+  E+ Q    +VKLFNRW+FDDV V D+SL DYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-95
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V D+SL DYIGV  AKHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-82
Identity = 152/190 (80.00%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+L+ TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-82
Identity = 152/190 (80.00%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+L+ TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]

BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: XP_022935538.1 (40S ribosomal protein S5-like [Cucurbita moschata] >XP_022983110.1 40S ribosomal protein S5-like [Cucurbita maxima] >XP_023528995.1 40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398 bits (1022), Expect = 1.68e-139
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: XP_022941782.1 (40S ribosomal protein S5-like [Cucurbita moschata] >XP_023005184.1 40S ribosomal protein S5-like [Cucurbita maxima] >XP_023540373.1 40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo] >XP_023540374.1 40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389 bits (998), Expect = 7.67e-136
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEV QELIQP +DVKLFNRWTFDDVQVNDMSLGDYIGVAP+KHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: XP_022151463.1 (40S ribosomal protein S5-like [Momordica charantia] >XP_022151465.1 40S ribosomal protein S5-like [Momordica charantia])

HSP 1 Score: 380 bits (977), Expect = 1.22e-132
Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MA+AVEV QEL QP +DVK+FNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+
Sbjct: 1   MADAVEVVQELTQPHHDVKIFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: XP_022941674.1 (40S ribosomal protein S5-like [Cucurbita moschata])

HSP 1 Score: 379 bits (972), Expect = 8.14e-132
Identity = 195/206 (94.66%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           +A  V+  QEL QP +DVKLFNRWTFDDVQVNDMSLGDYIGVAP+KHATYVPHTAGRYSM
Sbjct: 5   VAVPVDAGQELTQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 64

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 65  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 124

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 125 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 184

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 185 NAAKGSSNSYAIKKKDEIERVAKANR 210

[Close]

BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: XP_023005183.1 (40S ribosomal protein S5-like [Cucurbita maxima])

HSP 1 Score: 379 bits (972), Expect = 8.74e-132
Identity = 195/206 (94.66%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           +A  V+  QEL QP +DVKLFNRWTFDDVQVNDMSLGDYIGVAP+KHATYVPHTAGRYSM
Sbjct: 7   VAVPVDAGQELTQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 66

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 67  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 126

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 127 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 186

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 187 NAAKGSSNSYAIKKKDEIERVAKANR 212

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL
Match: A0A6J1J4T9 (40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111481755 PE=3 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 8.15e-140
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL
Match: A0A6J1FAT5 (40S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111442379 PE=3 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 8.15e-140
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL
Match: A0A6J1KYG3 (40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111498288 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 3.72e-136
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEV QELIQP +DVKLFNRWTFDDVQVNDMSLGDYIGVAP+KHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL
Match: A0A6J1FNF6 (40S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111447023 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 3.72e-136
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MAEAVEV QELIQP +DVKLFNRWTFDDVQVNDMSLGDYIGVAP+KHATYVPHTAGRYSM
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL
Match: A0A6J1DB82 (40S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111019394 PE=3 SV=1)

HSP 1 Score: 380 bits (977), Expect = 5.91e-133
Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSM 60
           MA+AVEV QEL QP +DVK+FNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+
Sbjct: 1   MADAVEVVQELTQPHHDVKIFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]

BLAST of Cp4.1LG03g00260 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 350.9 bits (899), Expect = 7.0e-97
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA + E+  E+ Q    +VKLFNRW+FDDV V D+SL DYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 350.9 bits (899), Expect = 7.0e-97
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA + E+  E+ Q    +VKLFNRW+FDDV V D+SL DYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V D+SL DYIGV  AKHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V D+SL DYIGV  AKHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]

BLAST of Cp4.1LG03g00260 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 55.1 bits (131), Expect = 7.9e-08
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  +   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKANR 207
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g00260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65731	3.4e-96	93.23	40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1	[more]
Q9ZUT9	9.8e-96	86.47	40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1	[more]
P51427	1.7e-95	87.44	40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2	[more]
Q5E988	1.2e-82	80.00	40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3	[more]
P46782	1.2e-82	80.00	40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4	[more]

BLAST of Cp4.1LG03g00260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935538.1	1.68e-139	100.00	40S ribosomal protein S5-like [Cucurbita moschata] >XP_022983110.1 40S ribosomal...	[more]
XP_022941782.1	7.67e-136	97.09	40S ribosomal protein S5-like [Cucurbita moschata] >XP_023005184.1 40S ribosomal...	[more]
XP_022151463.1	1.22e-132	94.66	40S ribosomal protein S5-like [Momordica charantia] >XP_022151465.1 40S ribosoma...	[more]
XP_022941674.1	8.14e-132	94.66	40S ribosomal protein S5-like [Cucurbita moschata]	[more]
XP_023005183.1	8.74e-132	94.66	40S ribosomal protein S5-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG03g00260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4T9	8.15e-140	100.00	40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111481755 PE=3 S...	[more]
A0A6J1FAT5	8.15e-140	100.00	40S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111442379 PE=3...	[more]
A0A6J1KYG3	3.72e-136	97.09	40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111498288 PE=3 S...	[more]
A0A6J1FNF6	3.72e-136	97.09	40S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111447023 PE=3...	[more]
A0A6J1DB82	5.91e-133	94.66	40S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111019394 PE=...	[more]

BLAST of Cp4.1LG03g00260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37270.1	7.0e-97	86.47	ribosomal protein 5B	[more]
AT2G37270.2	7.0e-97	86.47	ribosomal protein 5B	[more]
AT3G11940.1	1.2e-96	87.44	ribosomal protein 5A	[more]
AT3G11940.2	1.2e-96	87.44	ribosomal protein 5A	[more]
ATCG01240.1	7.9e-08	34.56	ribosomal protein S7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 62..206 e-value: 4.6E-37 score: 127.0
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 2..206 e-value: 3.3E-95 score: 319.3
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 19..206
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 1..206 e-value: 5.8E-40 score: 135.3
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 4..206
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	TIGRFAM	TIGR01028	TIGR01028	coord: 18..206 e-value: 1.4E-90 score: 299.9
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	CDD	cd14867	uS7_Eukaryote	coord: 19..206 e-value: 4.40579E-136 score: 376.894
None	No IPR available	PANTHER	PTHR11205:SF36	40S RIBOSOMAL PROTEIN S5	coord: 4..206
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 72..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g00260.1	Cp4.1LG03g00260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding