Cp4.1LG02g17630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g17630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase MARCH8-like
Location	Cp4.1LG02: 14365585 .. 14372702 (-)
RNA-Seq Expression	Cp4.1LG02g17630
Synteny	Cp4.1LG02g17630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGATTCAGATCAAATTTGATTTTAAGTGGAGCTCCTTTTGAGTGAGATTGGGCTTGGGCGAACTTTGGGCCACGGGCCCTTAACGAACGAGGCTGACTGCAGACTTCTGATCCTCCATAGATCGTCTCGGATCCTACGGAATGCAACTGGTAGCATAATTATTTGATTTACAAAATACAATTGGATGAATCCGGCTAAAATTGTTGTCATAATTACTTGATTTCTGTGAGTTTCGTAATTTTTCAACTTCTTCACCAAGAACAAAGATTAAAAGAAAAGGGGGAATTAACGAACAATTGATCAAATAAATATGCTGAATCGAGAACAAAGAGAGAGAAAGCGAGAGGTGGGATGTGTCCTCCGAGCTGAATAGTTAAACCTGGATTGTTCTTTCCTCTTGCTTCACCTTTATACTCCGTTTGGTAGTTTTTGCCGGGCCAGACAACCTACATACCTAAAACTCATACTCACGCTCTGTTAAGAGAGAGAGAGAGAGAGAGAGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGCCTTCCCAGCTGAATCACTAGCGCCATTTCTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTGTCTCATTCTCCTTCGCTTTACAGGTACTTTCTACTCTTAATCAATCATTCACCCCTTATCCGCATTTCTATTTCTGATCGTCTTTTTAGATCTTTTCCATTTTCCCCGTTTTCGTACCACTGGGTGATGATTTTATGATCTGGGTTTTCGAATTTGATCCTTTTCAGATGACTTTTGACTGTAGATGGGATTAATCAGAAATGGGTTACTTCTGTATTCTTTGTTTAATTGCCCTCCGCTCTGGAATTGATCACTATCACTCTCCTTTACAGAGGGATACCATGGTTTTACTTTGTTTCTTTGATTTCAACTGTGGACTCCATCAGTATGAAGAATGTGGTCGACCTTTATTTCATTATTTTTTCTGAATTTTTTTCTTTGAGCTATGATTCTATCATCTCCTTACACTCCTAGATTTGAAGTCGTTTGAGGGTTTTCATCATGGAGGATGTTCGATAAGGAGAAGATGTAGTCTTAGAAGTCTGCGTTCAGTGTGGATAACCTTGTGACAGATGAAATTCTGCCTATCTCGATCTAGGAGAATGTATTTGAAGCTGAGTTTTCTTTGAGTTTTCTTTTCTTCTCGGACATGTTCATGTAGTTAAAGCTGCCCGAGGAACTATACTAACCTGGATGCTAGATAGCAGTTAAGCGTCCATTTCGAAGCTCAGTGTATGCTTAAGGTTGCAGAGAAGGGAACTGTAAGCTAGAAACGTAAAGCCATGCTTTTTCCATAGGGTGGGTAGTGGGAGAAGCAGTAAGAATTTCATTGACCCCTTGGAGGAGGAGATGAGAATGTTGGTTAAGGAGGAGAATGAGACTGAGCCCTTGGAGGATAATGGGTTCTCATGGCCTTCTTTCAGGACAATTGGGTGGGCATAAAAGAGGACTTGATGCGGGTGCTGATGTTCTTTGAATGAGGCATTTTGGATAACTCTCTGAATCAGACTTTTGTTTGCTTTGTTCCTAAAAGAAGAGAGGCCAAACAAGGTTAAGGACTTTAGACCCATCAACTTGGTTGTGAGATTGGCACTTCCCCTTCTCTTATTTAGGTTTCCCCATTGACCGTAAACCGAATTCTATCACTTTTTGGAATCATGTTGTGGAGAAGGTGCGAAAGAGATTTGCTTTCCTCTTTTGTTTTCTTTTTTTCCTTTTCTTTTACAAGTGTAGATTTACTTTTATCTATTTAGTTTTTACCCGTCTACTTCTTTTCCCTTTTTAGAGCCCCCAATTCTGTTTCTAAGTCTTTAGAGAAGCTTACGAGGTATTTACCATCGGAAGGGGTCGATGAGGGTAGGAGTGTAAATTGGGTAAATTGGGACTTAGGTGGGGAAGCCAGAGAATCTTGAGGGACTCAAGTTAGAAAATTTAAGGATCCCAACTTTTAATTGTAACGACCCACTTGCCAAAGTTCAAATCATGGATCACCACATGGACTCAAAAGGTCAAAAGGCGACAATTGTAAAGCAGGAGACCGAAAGGAAATTTGAAATTTAACATGCTTTTATAACTGATGTAAAAATAATTTAAAAGTACGCATCAAAATAGCTCACTAAGATAGCAAGTTTTTGAAGAGAATAACATTAAAATAATATTAAAAGTAACATGGATGGAAGAGACTCAATCTATGGCCCCTCCTGCAGTCACACGTCTCCGTATGCTCCCACTATCAACTTACGCTCCATCTAAAAACATAGAATAATATGGGACGAGTATAAAATACTCATTAGGCAACCAACTTGTAGGCTCTTGTTGGACTCATTCCTATACATGAAAACATAGGCTATGTGTTCATAATTATCCCTAGAAGTATCCAAACTACAACATATAGTACTAAACCCCTCAGCATNTATTTTCAACCCCCTCGGGGTTCATAACCGGTGGGTTTTTCTCTCTCTCTTAGCTCTATGTTTAACGTATATCTGGTTCCGTCGTCAATCTTGCGCAAATTGCACCTCGAGTCACTATGACTCATGGAAGGGCCATAAGATAATACTCTTTAAGTCTAGAAGAGCCCTTTTGTTCTTTCTCCTTTCAAACACGCTTCTGTCGCCGTACAGTGTTGTCCGTGGTGATAGTGTACGGTGGCGGCTGAAACCGTCCTCTCTTTATTTATTTTTTTTAATTTTCTAGCTGTCATCACTTTCCCTCTTCTTTATTTCAAATACATTGATCATCACATTAACGATTCCCGGTTGAGCCTAAAACCCCCTCATCTGTTCGAGTGGGTGCTTGGTGGGGATAAAGGCACTTACAAAAATCCTTGGAAGGCGTCTACTTTGAGCCCCCTTCCTTTTCTATTCTGGTCTAGTTCTCCATGGAAGAGATATGAACCGTTCCTAATTTGAGGATGGAAATTTGGAGTATTTTCTGCATTGATGGATAAGATTGGCTAATTGGCAAGCTTGGTAGTTCGTTACATCAGCTCCAAAAGAATAAGTTACATTGGAATTCAGAAAATTCTATGAGTTCTTAGTTGCATTAAAGAAGAAGATATAGAGGTTGTGGCCACTGGCAAGGCATTTCTACACCCGCCCTTATCTGCCAGAAAAATTGATGAACCGGCAAGGCTTCAACATAAGGGAGCAGGAATTACTAACTAAGAGCAACCTTTGTGCTTAGGAAGGACTAGCTAAGCTATACCTATTTCTCACGGGTAGTTTAGGTGCCAGGACCTTGCTTCTATCCCTAACCAATTACAATAAATAGTTGTGGTTGTGGCACCCTAAGTAACCTCAACCTCAAGCACTAGTATAATGAAGTATTAACATTCACACTATAGGTTTTGCAGTGATAACTTTTATCCGAGGCCAAGTACATTCCTTCCTTATTACTAAAATAAAGAATTAAGGTTACATATAAGGTAACCTCCACCTAGATTTGGTATATAAAGAAATTGTCATTGCCAGTTACGAAAGACAATGATATTATCCCATGGTTAACTGTATATATTTGATCTTCTATGTGTATAATTTCGTGCAAACTTGATTACTCTGATTTCCACAATTATGCAGGTTCGTTAATTTTCATGTAAATGATCAATCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGGTAGGCTCCTCACAATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGTTTTTAACATTCTTTTTTTGTTCAATATGCAATGCAATTTCATCAAACATCAGTTAAGACAGTGTTTCTTTCAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGTCAGTTTTCCTGAATTTCATATTACCTCTCTATTCTTAATTCTTAATTGTAGCAGATATTGTCGATTATGCCCCGTGATATGTCATCTTAATTGTAGCAGATATTGTCGATTATGCCCCGTGATATGTCATCGTCAGTCTCACGATTTTAAAATGCGCCTACTAGGGAGTTCTACTCTCTTATTAGGAATGCTTCGTTTCCCTTTTCAACCAATGTGGGATCTCCCGATCCACCACCCTCTTGGGAACCCAGCGTCCTTATGGCACACTGCCTGGTAACTGACCCTAATACCATTTGTAACAACTCAAGTCCACTGCTATCAAATATTGTCTGTTTTGGCCCATTACGTATCGTCGTCAGCCTCACGGTTTTAAAATGCGCCTACTAGGGAGAGGTTTCCACATCCTTATAAGGAATGTTTCGTTTCCCTCTTCAACCAATGTGAGATCTCATAGTTGGTTAGAACCCGCATCGGTTGAAGAGAGAAACGAAACATTTCTTATAAGGGTGTGAAAACAACTCCGTTTTAAAATCGTGAGGCTGACGGCGATACATAACCGGCCAAAGCAAACAATATCTACTAATAGTGGGCTTGAGCGGTTACAAATAGTATTGGAATGGCTCAAAAGATGTGTCAACAAAGACGTTGGACCTCCAAGAAGAGTGGATTGTGAGATTTAACATTAGTTGAAAAGGAGAACGAGTCAGTGAAAACCTCCTCTAATAGGAGTGTTTTTAAAACTGTGAGGCTGATAGCAATACATAACATATCAAAGCTGACAATATCTGCCAATATCTACTGGCAGTAGGTGTAGATTTAGGTTTAGGTTGTTATATATTTGAACTACTACCAATCTAATACATCTGCTTTCATAGACGTTCCAAACAAGTGGGTGTTCGATAATGAAGTTTTCAAGGTTTTTGGCTTCTAATCCATGTCAGTAATTCTGTCAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGGTAGATTCTTGTAATTATATTTTCAACTACTCTGGGTTCATTCACTTTTAAGTCAAGGAGTTTGATTCGAGTTTGGCTAAATTTTCTTCCTTATTATTATCATATAAACCCATTTCATTGTTATGATTGATTTTTCTAGAGAGATCTTCACCATGTGCTTTAAACAGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGGTATACTGAGGCTGCCGATTAACTACTTACTTTTTAGTCTTTCTTATATACGTATTGTATTTATTAAAGTGAATATTCTCCCACAGATTTTTGGTTTCTTTTGATAAGAAGAACCTAGAACTTGCTGTTGGATGAATCCTTGAATGAAATCAAGCACACCGGCTTAAGAAAATGTAGTTGCTATACTATCCGACTTTTAAATGCTTCGTTCTATAATTTCCTTCTGCAGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTTCAGTAACGATTTAAGATCAGAATATTGTAAAATTGTCCTCCCCCCGTTAAGAGTTTTATGTCAAAGTTGCGCTTACAGCGGTTAGCATGTATTCCACCTGAGATTGATGGTTCAAATGTCCCATCTCCTATTCTTTGTACTAAAAGAAAAACTTTATACATTTCAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAATCTGGAACTTCATGAACTCAACTTGATGTAAGGAACTCTGTAGTGTATAAATTCCTCATCTTTTTATATCTCACTGGAGAATTAGCATTTGGGTAATGTTGTCTGGCCATAATATTTGTTTTGTAACTTCAGAATTCAATTTACAATTATATTGCAAGAATCCTGGAGGTTTTACATTTTTTTGACCCCGTAATCTTCACAGGTTTTGATTGATCTGGCGGGTATACCTTTGAGTTGATCAAACAAAGCAAATTGTTTATAAAATTTCGCGAGATACCTAGCAAGAAGAGTCTGTGCCTTCCTCGTTTACTATAGCGGTCTGTTTGAACAAATAAGGAGTCGCTTCTTGGTTGGGCACACAGATTTCCTGGTGTAAATGGGCATTCTACGTGATGACGAGGAAATTGCTTCCCGTCCCGCCAGGCTCCCACTTACCCCTGAAGGCCATTTCACATATCCTTTTGGATTTGTATTTCTTTGTGAACGATTCAAATTAGTAAATTAAACTGTAATTTATCTGTTAGCTATTGAGTTATCCAAGATGCTTCAAGGTTAAGACAGCTATGCGTCCATACTCCTATTAATGTGTGTGATCCTTACCTCTTGGGTTCTTTTAGGCAGTCAAAGATATTGCTTAGTTCTAGTCTTTCAGCATTCGTATATGAAGATGTTTCACAAGGAAGGAAAGAGGTCGGTTTGGCTTTTTGCGGAGAAAGAGGGAGAATTGGAGATTAGAAGCTAATCCTTCAATTTCATAGAAGAAGAAACAAACAACGTATCATAATATATGTATAACGAAGTATGAATGAATCCTTAAGTTGGGAGTAAAAGGAAATAAGGTAATTTGAGCACAAAAAAGAAAGAGAGAAAAAAACAAAGAAGAGAAGAAATCACCGAGATTCTAGAGTTCCGAATCTGGTTGTGGTCGGAGCGTTTGAGCGGCAGCCTTGGCAGAATCCTCCACCATTTGTTTGGTTGTGTGGAAGCTCTTGGTAATGGATTCCTTCATATTCTCATTCCCCTTCACTTGTCCATCTTCCACCGGTTTT

mRNA sequence

AATGATTCAGATCAAATTTGATTTTAAGTGGAGCTCCTTTTGAGTGAGATTGGGCTTGGGCGAACTTTGGGCCACGGGCCCTTAACGAACGAGGCTGACTGCAGACTTCTGATCCTCCATAGATCGTCTCGGATCCTACGGAATGCAACTGGTAGCATAATTATTTGATTTACAAAATACAATTGGATGAATCCGGCTAAAATTGTTGTCATAATTACTTGATTTCTGTGAGTTTCGTAATTTTTCAACTTCTTCACCAAGAACAAAGATTAAAAGAAAAGGGGGAATTAACGAACAATTGATCAAATAAATATGCTGAATCGAGAACAAAGAGAGAGAAAGCGAGAGGTGGGATGTGTCCTCCGAGCTGAATAGTTAAACCTGGATTGTTCTTTCCTCTTGCTTCACCTTTATACTCCGTTTGGTAGTTTTTGCCGGGCCAGACAACCTACATACCTAAAACTCATACTCACGCTCTGTTAAGAGAGAGAGAGAGAGAGAGAGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGCCTTCCCAGCTGAATCACTAGCGCCATTTCTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTGTCTCATTCTCCTTCGCTTTACAGGTTCGTTAATTTTCATGTAAATGATCAATCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGGTAGGCTCCTCACAATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAATCTGGAACTTCATGAACTCAACTTGATGTTTTGATTGATCTGGCGGGTATACCTTTGAGTTGATCAAACAAAGCAAATTGTTTATAAAATTTCGCGAGATACCTAGCAAGAAGAGTCTGTGCCTTCCTCGTTTACTATAGCGGTCTGTTTGAACAAATAAGGAGTCGCTTCTTGGTTGGGCACACAGATTTCCTGGTGTAAATGGGCATTCTACGTGATGACGAGGAAATTGCTTCCCGTCCCGCCAGGCTCCCACTTACCCCTGAAGGCCATTTCACATATCCTTTTGGATTTGTATTTCTTTGTGAACGATTCAAATTAGTAAATTAAACTGTAATTTATCTGTTAGCTATTGAGTTATCCAAGATGCTTCAAGGTTAAGACAGCTATGCGTCCATACTCCTATTAATGTGTGTGATCCTTACCTCTTGGGTTCTTTTAGGCAGTCAAAGATATTGCTTAGTTCTAGTCTTTCAGCATTCGTATATGAAGATGTTTCACAAGGAAGGAAAGAGGTCGGTTTGGCTTTTTGCGGAGAAAGAGGGAGAATTGGAGATTAGAAGCTAATCCTTCAATTTCATAGAAGAAGAAACAAACAACGTATCATAATATATGTATAACGAAGTATGAATGAATCCTTAAGTTGGGAGTAAAAGGAAATAAGGTAATTTGAGCACAAAAAAGAAAGAGAGAAAAAAACAAAGAAGAGAAGAAATCACCGAGATTCTAGAGTTCCGAATCTGGTTGTGGTCGGAGCGTTTGAGCGGCAGCCTTGGCAGAATCCTCCACCATTTGTTTGGTTGTGTGGAAGCTCTTGGTAATGGATTCCTTCATATTCTCATTCCCCTTCACTTGTCCATCTTCCACCGGTTTT

Coding sequence (CDS)

ATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAA

Protein sequence

MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY

Homology

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot
Match: A0JN69 (E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot
Match: Q86UD3 (E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot
Match: Q8BRX9 (E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot
Match: Q5XIE5 (E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot
Match: Q5PQ35 (E3 ubiquitin-protein ligase MARCHF2 OS=Xenopus laevis OX=8355 GN=marchf2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 0


Query: 60  ADLPQCRICLDTG-GEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMI 119
           +D P CRIC + G GE L++PC C GT   VH+ CL+ W S+      ++C  C   F +
Sbjct: 59  SDGPICRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSN---TSYCELCHTEFAV 118

Query: 120 -RANVPTDRW 128
            R   P   W
Sbjct: 119 ERRPRPVTEW 125

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: XP_022948731.1 (E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucurbita moschata] >XP_022948732.1 E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 509 bits (1312), Expect = 3.52e-182
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNA 60
           MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHN NVDETCHLVNA
Sbjct: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNLNVDETCHLVNA 60

Query: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120
           DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA
Sbjct: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120

Query: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180
           NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF
Sbjct: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180

Query: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240
           YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP
Sbjct: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240

Query: 241 RHVMELRMLGLY 252
           RHVMELRMLGLY
Sbjct: 241 RHVMELRMLGLY 252

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: XP_022998756.1 (E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 498 bits (1283), Expect = 9.29e-178
Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNA 60
           MQLAPNNDENA ILSQLDFQPQSVESSSP EIIVIGRESSVT+DDLHN NVDETCHLVNA
Sbjct: 1   MQLAPNNDENAHILSQLDFQPQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNA 60

Query: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120
           DL QCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA
Sbjct: 61  DLLQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120

Query: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180
           NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF
Sbjct: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180

Query: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240
           YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP
Sbjct: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240

Query: 241 RHVMELRMLGLY 252
           RHVMELRMLGLY
Sbjct: 241 RHVMELRMLGLY 252

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: XP_023524617.1 (uncharacterized protein LOC111788515, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475 bits (1222), Expect = 1.06e-167
Identity = 232/233 (99.57%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 20  QPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAP 79
           +PQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAP
Sbjct: 68  EPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAP 127

Query: 80  CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 139
           CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR
Sbjct: 128 CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 187

Query: 140 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 199
           DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI
Sbjct: 188 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 247

Query: 200 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 252
           AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY
Sbjct: 248 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 300

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: XP_022948733.1 (E3 ubiquitin-protein ligase MARCH8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 471 bits (1212), Expect = 5.76e-167
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 20  QPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAP 79
           +PQSVESSSPAEIIVIGRESSVTDDDLHN NVDETCHLVNADLPQCRICLDTGGEDLIAP
Sbjct: 18  EPQSVESSSPAEIIVIGRESSVTDDDLHNLNVDETCHLVNADLPQCRICLDTGGEDLIAP 77

Query: 80  CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 139
           CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR
Sbjct: 78  CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 137

Query: 140 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 199
           DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI
Sbjct: 138 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 197

Query: 200 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 252
           AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY
Sbjct: 198 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: XP_022956176.1 (E3 ubiquitin-protein ligase MARCH1-like [Cucurbita moschata] >XP_022956177.1 E3 ubiquitin-protein ligase MARCH1-like [Cucurbita moschata] >XP_022956178.1 E3 ubiquitin-protein ligase MARCH1-like [Cucurbita moschata])

HSP 1 Score: 469 bits (1206), Expect = 6.56e-166
Identity = 235/259 (90.73%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDE 60
           MQL PNNDEN       APILSQLDF PQSV SSS AEII IGRESS +DDD HN NVDE
Sbjct: 1   MQLVPNNDENTDDILERAPILSQLDFLPQSVGSSSSAEIIAIGRESSGSDDDSHNLNVDE 60

Query: 61  TCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECR 120
           T HLVNAD PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECR
Sbjct: 61  TSHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 121 AMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180
           AMF++RANVP+DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY
Sbjct: 121 AMFVLRANVPSDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180

Query: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK 240
           EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK
Sbjct: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK 240

Query: 241 SVPELDPRHVMELRMLGLY 252
           +VPELDP HVMELRMLGLY
Sbjct: 241 NVPELDPSHVMELRMLGLY 259

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL
Match: A0A6J1GA24 (E3 ubiquitin-protein ligase MARCH8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452312 PE=4 SV=1)

HSP 1 Score: 509 bits (1312), Expect = 1.70e-182
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNA 60
           MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHN NVDETCHLVNA
Sbjct: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNLNVDETCHLVNA 60

Query: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120
           DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA
Sbjct: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120

Query: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180
           NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF
Sbjct: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180

Query: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240
           YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP
Sbjct: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240

Query: 241 RHVMELRMLGLY 252
           RHVMELRMLGLY
Sbjct: 241 RHVMELRMLGLY 252

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL
Match: A0A6J1KB37 (E3 ubiquitin-protein ligase MARCH8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493325 PE=4 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 4.50e-178
Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNA 60
           MQLAPNNDENA ILSQLDFQPQSVESSSP EIIVIGRESSVT+DDLHN NVDETCHLVNA
Sbjct: 1   MQLAPNNDENAHILSQLDFQPQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNA 60

Query: 61  DLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120
           DL QCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA
Sbjct: 61  DLLQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRA 120

Query: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180
           NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF
Sbjct: 121 NVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGF 180

Query: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240
           YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP
Sbjct: 181 YAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDP 240

Query: 241 RHVMELRMLGLY 252
           RHVMELRMLGLY
Sbjct: 241 RHVMELRMLGLY 252

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL
Match: A0A6J1GA57 (E3 ubiquitin-protein ligase MARCH8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452312 PE=4 SV=1)

HSP 1 Score: 471 bits (1212), Expect = 2.79e-167
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 20  QPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAP 79
           +PQSVESSSPAEIIVIGRESSVTDDDLHN NVDETCHLVNADLPQCRICLDTGGEDLIAP
Sbjct: 18  EPQSVESSSPAEIIVIGRESSVTDDDLHNLNVDETCHLVNADLPQCRICLDTGGEDLIAP 77

Query: 80  CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 139
           CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR
Sbjct: 78  CHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVAR 137

Query: 140 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 199
           DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI
Sbjct: 138 DHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFI 197

Query: 200 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 252
           AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY
Sbjct: 198 AIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL
Match: A0A6J1GVL5 (E3 ubiquitin-protein ligase MARCH1-like OS=Cucurbita moschata OX=3662 GN=LOC111457949 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 3.18e-166
Identity = 235/259 (90.73%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDE 60
           MQL PNNDEN       APILSQLDF PQSV SSS AEII IGRESS +DDD HN NVDE
Sbjct: 1   MQLVPNNDENTDDILERAPILSQLDFLPQSVGSSSSAEIIAIGRESSGSDDDSHNLNVDE 60

Query: 61  TCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECR 120
           T HLVNAD PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECR
Sbjct: 61  TSHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 121 AMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180
           AMF++RANVP+DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY
Sbjct: 121 AMFVLRANVPSDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180

Query: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK 240
           EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK
Sbjct: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK 240

Query: 241 SVPELDPRHVMELRMLGLY 252
           +VPELDP HVMELRMLGLY
Sbjct: 241 NVPELDPSHVMELRMLGLY 259

[Close]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL
Match: A0A6J1IX90 (E3 ubiquitin-protein ligase MARCH8-like OS=Cucurbita maxima OX=3661 GN=LOC111479989 PE=4 SV=1)

HSP 1 Score: 467 bits (1202), Expect = 1.29e-165
Identity = 235/259 (90.73%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDE 60
           MQL PNNDEN       APILSQLDF PQSV SSS AEII IGRESS +DDDLHN NVDE
Sbjct: 1   MQLVPNNDENTDDILERAPILSQLDFLPQSVGSSSSAEIIAIGRESSGSDDDLHNLNVDE 60

Query: 61  TCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECR 120
           T HLVNAD PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECR
Sbjct: 61  TSHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 121 AMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180
           AMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY
Sbjct: 121 AMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGY 180

Query: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK 240
           EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE NK
Sbjct: 181 EEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREQNK 240

Query: 241 SVPELDPRHVMELRMLGLY 252
           +VPELDP HVMELRMLGLY
Sbjct: 241 NVPELDPSHVMELRMLGLY 259

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR 10
Match: AT1G50440.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-101
Identity = 185/258 (71.71%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSV--ESSSPAEIIVIGRESSVTDD----DLHNPNVDET 60
           MQL P++D++       D + Q +  ES+S  EI+   R   V ++    ++   + DET
Sbjct: 1   MQLVPSDDDD-------DRKEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
             LV+ D PQCRICLD GGEDLIAPC+CKGTQK+VHR CLDNWRSTKEGFAF+HCTECRA
Sbjct: 61  TLLVSGDQPQCRICLDVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
            F +RANVP DRWWLRL+FQ LVARDHAFIFI VQ+IVAFLG+LVYKFYGEELREMFGYE
Sbjct: 121 FFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYE 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY +AVLAI+LVGLLYGFFIAIICGQ+INERHYHVLAKQELTKEYIVEDR+  K+
Sbjct: 181 EHPYGFYTLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRD-CKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           VPELD  HVMEL+MLGLY
Sbjct: 241 VPELDQSHVMELKMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR 10
Match: AT1G50440.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-101
Identity = 185/258 (71.71%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSV--ESSSPAEIIVIGRESSVTDD----DLHNPNVDET 60
           MQL P++D++       D + Q +  ES+S  EI+   R   V ++    ++   + DET
Sbjct: 1   MQLVPSDDDD-------DRKEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
             LV+ D PQCRICLD GGEDLIAPC+CKGTQK+VHR CLDNWRSTKEGFAF+HCTECRA
Sbjct: 61  TLLVSGDQPQCRICLDVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
            F +RANVP DRWWLRL+FQ LVARDHAFIFI VQ+IVAFLG+LVYKFYGEELREMFGYE
Sbjct: 121 FFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYE 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY +AVLAI+LVGLLYGFFIAIICGQ+INERHYHVLAKQELTKEYIVEDR+  K+
Sbjct: 181 EHPYGFYTLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRD-CKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           VPELD  HVMEL+MLGLY
Sbjct: 241 VPELDQSHVMELKMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR 10
Match: AT1G50440.3 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-101
Identity = 185/258 (71.71%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MQLAPNNDENAPILSQLDFQPQSV--ESSSPAEIIVIGRESSVTDD----DLHNPNVDET 60
           MQL P++D++       D + Q +  ES+S  EI+   R   V ++    ++   + DET
Sbjct: 1   MQLVPSDDDD-------DRKEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
             LV+ D PQCRICLD GGEDLIAPC+CKGTQK+VHR CLDNWRSTKEGFAF+HCTECRA
Sbjct: 61  TLLVSGDQPQCRICLDVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
            F +RANVP DRWWLRL+FQ LVARDHAFIFI VQ+IVAFLG+LVYKFYGEELREMFGYE
Sbjct: 121 FFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYE 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY +AVLAI+LVGLLYGFFIAIICGQ+INERHYHVLAKQELTKEYIVEDR+  K+
Sbjct: 181 EHPYGFYTLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRD-CKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           VPELD  HVMEL+MLGLY
Sbjct: 241 VPELDQSHVMELKMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-36
Identity = 104/314 (33.12%), Postives = 145/314 (46.18%), Query Frame = 0


Query: 9   ENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRIC 68
           ++AP+L   D    S  S S A ++    +    ++DL N      C         CRIC
Sbjct: 18  DSAPLLG--DHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAPC---------CRIC 77

Query: 69  LDTG----GEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPT 128
           L+      G++LI+PC CKGTQ++VHR CLD+WRS KEGFAF+HCT C+A F +R     
Sbjct: 78  LEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEPFE 137

Query: 129 DR--WWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGE-ELREMFG------YEE 188
           D   W  + KF+  VARD   +F+ VQ ++A +    Y    + E R  F         +
Sbjct: 138 DNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRILSK 197

Query: 189 HPYGFY------------------------------------------------------ 248
           HP  FY                                                      
Sbjct: 198 HPIPFYYCIGVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASMEAC 257

Query: 249 -AMAVLAII---LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPE 252
            A+ V+ ++   ++GL YGF  A +  QRI +RHYH+L K+ELTKEYIVED   + + P+
Sbjct: 258 FALVVVFVVIFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYTPPK 317

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR 10
Match: AT2G22120.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-36
Identity = 96/290 (33.10%), Postives = 129/290 (44.48%), Query Frame = 0


Query: 64  QCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVP 123
           QCRICL+T G D IAPC CKGT KYVHR CLD+WR+ KEGFAFAHCT C+A + +R +  
Sbjct: 34  QCRICLETDGRDFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVHSA 93

Query: 124 TDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVY---KFYGEELREMFGYEEHPYGF 183
            DR W  LKF+F V RD   IF+ VQL++A L  +VY    +    LR ++G++     +
Sbjct: 94  GDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFIDSYQQSWLRHIWGFDSEVTFY 153

Query: 184 Y----------------------------------------------------------- 243
           Y                                                           
Sbjct: 154 YMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELCLCCCQPGICTDCHLPGTICMWA 213

Query: 244 ----------------------------------AMAVLAII-LVGLLYGFFIAIICGQR 252
                                             A+ +L +  ++G+ Y   +A + GQR
Sbjct: 214 DCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVILGLFTVIGIFYSVLVATMVGQR 273

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g17630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JN69	8.0e-07	36.62	E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1	[more]
Q86UD3	8.0e-07	36.62	E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1	[more]
Q8BRX9	8.0e-07	36.62	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=...	[more]
Q5XIE5	8.0e-07	36.62	E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=...	[more]
Q5PQ35	1.4e-06	38.57	E3 ubiquitin-protein ligase MARCHF2 OS=Xenopus laevis OX=8355 GN=marchf2 PE=2 SV...	[more]

BLAST of Cp4.1LG02g17630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948731.1	3.52e-182	99.60	E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucurbita moschata] >XP_0229...	[more]
XP_022998756.1	9.29e-178	98.02	E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucurbita maxima]	[more]
XP_023524617.1	1.06e-167	99.57	uncharacterized protein LOC111788515, partial [Cucurbita pepo subsp. pepo]	[more]
XP_022948733.1	5.76e-167	99.14	E3 ubiquitin-protein ligase MARCH8-like isoform X2 [Cucurbita moschata]	[more]
XP_022956176.1	6.56e-166	90.73	E3 ubiquitin-protein ligase MARCH1-like [Cucurbita moschata] >XP_022956177.1 E3 ...	[more]

BLAST of Cp4.1LG02g17630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA24	1.70e-182	99.60	E3 ubiquitin-protein ligase MARCH8-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KB37	4.50e-178	98.02	E3 ubiquitin-protein ligase MARCH8-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GA57	2.79e-167	99.14	E3 ubiquitin-protein ligase MARCH8-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1GVL5	3.18e-166	90.73	E3 ubiquitin-protein ligase MARCH1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IX90	1.29e-165	90.73	E3 ubiquitin-protein ligase MARCH8-like OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]

BLAST of Cp4.1LG02g17630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50440.1	7.4e-101	71.71	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.2	7.4e-101	71.71	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.3	7.4e-101	71.71	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G11020.1	1.7e-36	33.12	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.1	1.7e-36	33.10	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 64..113 e-value: 2.7E-14 score: 63.5
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 65..112 e-value: 8.3E-10 score: 38.6
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 57..119 score: 19.265308
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..118 e-value: 3.0E-16 score: 61.0
None	No IPR available	PANTHER	PTHR46347:SF2	OS02G0132300 PROTEIN	coord: 8..251
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 8..251
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 65..113 e-value: 3.94818E-18 score: 73.9008
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 61..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g17630.1	Cp4.1LG02g17630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding