Cp4.1LG02g16990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g16990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG02: 12450338 .. 12450776 (-)
RNA-Seq ExpressionCp4.1LG02g16990
SyntenyCp4.1LG02g16990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAACCATGTCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTTGTCTCGACCGGTTGCAATGCTTTTGCAGTTACCAAACCACTCTTCAACCACACCCAAGGTGAGTTAATTTGCTCTTCAAAACTTTGAAAATCCTAAAACCTTTTATGTTTATAGTAAAAGTAGTGTCTTGAATCCCATAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAAGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCAATCCCTTCAATCGGGCTAATCCTTGTTGA

mRNA sequence

ATGGCTGCAACCATGTCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTTGTCTCGACCGGTTGCAATGCTTTTGCAGTTACCAAACCACTCTTCAACCACACCCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAAGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCAATCCCTTCAATCGGGCTAATCCTTGTTGA

Coding sequence (CDS)

ATGGCTGCAACCATGTCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTTGTCTCGACCGGTTGCAATGCTTTTGCAGTTACCAAACCACTCTTCAACCACACCCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAAGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCAATCCCTTCAATCGGGCTAATCCTTGTTGA

Protein sequence

MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC
Homology
BLAST of Cp4.1LG02g16990 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima])

HSP 1 Score: 229 bits (585), Expect = 9.67e-76
Identity = 113/118 (95.76%), Postives = 117/118 (99.15%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATMSMKPATIAVVILLLVST C+AFA+TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata])

HSP 1 Score: 229 bits (585), Expect = 9.67e-76
Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATM MKP TIAVVILLLVSTGC+AFA+TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. NCBI nr
Match: KAG7036723.1 (hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (584), Expect = 1.37e-75
Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATM MKPATIAVVILLLVSTGC+AFA+TKPLFNHTQGPGKHVIGDDID EFLMESHIS
Sbjct: 1   MAATMPMKPATIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDNEFLMESHIS 60

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. NCBI nr
Match: KAG6607027.1 (hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (585), Expect = 6.41e-75
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATM MKPATIAVVILLLVSTGC+AFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175

BLAST of Cp4.1LG02g16990 vs. NCBI nr
Match: KAE8650593.1 (hypothetical protein Csa_011480, partial [Cucumis sativus])

HSP 1 Score: 124 bits (311), Expect = 1.53e-34
Identity = 59/78 (75.64%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 41  GKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG 100
           GK +IGD IDT+FLMESH+SR+LAE   LRFETMR+PN N ASVV+CERPPR+DSCLGE 
Sbjct: 2   GKRLIGD-IDTDFLMESHVSRILAE---LRFETMRTPNANSASVVNCERPPRYDSCLGEA 61

Query: 101 KNNPPSENCNPFNRANPC 118
           ++NPPSENC+P+NRANPC
Sbjct: 62  RDNPPSENCDPYNRANPC 75

BLAST of Cp4.1LG02g16990 vs. ExPASy TrEMBL
Match: A0A6J1K9J3 (uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 4.68e-76
Identity = 113/118 (95.76%), Postives = 117/118 (99.15%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATMSMKPATIAVVILLLVST C+AFA+TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. ExPASy TrEMBL
Match: A0A6J1G8W5 (uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC111452043 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 4.68e-76
Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60
           MAATM MKP TIAVVILLLVSTGC+AFA+TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENC+PFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. ExPASy TrEMBL
Match: A0A0A0L9X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 6.31e-46
Identity = 78/117 (66.67%), Postives = 99/117 (84.62%), Query Frame = 0

Query: 2   AATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGDDIDTEFLMESHISR 61
           AAT+S++  T+A+V LLLV+ GC+AF  +KP+FN +   GK +IGD IDT+FLMESH+SR
Sbjct: 3   AATLSIRT-TLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGD-IDTDFLMESHVSR 62

Query: 62  VLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           +LAE   LRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPPSENC+P+NRANPC
Sbjct: 63  ILAE---LRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

BLAST of Cp4.1LG02g16990 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 2.14e-33
Identity = 68/120 (56.67%), Postives = 83/120 (69.17%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNH-TQGPGKHVIGD-DIDTEFLMESH 60
           MA    M P  +A+ ILL     C+A   +K L N+ T G  K +IGD DI +EFLME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  ISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           +SR+LAE   LRF+TM +PN N+ SV DCERPPR+DSCLGE +N PP+ENC  FNRANPC
Sbjct: 61  LSRILAES--LRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

BLAST of Cp4.1LG02g16990 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 120 bits (301), Expect = 8.41e-33
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 0

Query: 1   MAATMSMKPATIAVVILLLVSTGCNAFAVTKPLFNHTQGPGKHVIGD-DIDTEFLMESHI 60
           MAA   M PA +A++ILLL  T  +A    KPL N T   GK++IGD DID+EFLMESHI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCNPFNRANPC 118
           SR+LA   +  F+T ++ + N AS   CERPPR+DSCLG+  NNPP ENC  FNR NPC
Sbjct: 61  SRILAGSQD--FQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022998176.19.67e-7695.76uncharacterized protein LOC111492901 [Cucurbita maxima][more]
XP_022948337.19.67e-7695.76uncharacterized protein LOC111452043 [Cucurbita moschata][more]
KAG7036723.11.37e-7595.76hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6607027.16.41e-7596.61hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8650593.11.53e-3475.64hypothetical protein Csa_011480, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1K9J34.68e-7695.76uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901... [more]
A0A6J1G8W54.68e-7695.76uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A0A0L9X56.31e-4666.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
A0A6J1CP712.14e-3356.67uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1KBP58.41e-3356.30uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g16990.1Cp4.1LG02g16990.1mRNA