Cp4.1LG02g16820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAACAAAACAAAACAAAAACAAATAATTTGGATCTGTGGTTCGAGCAGATCAGATCATCGTCTTCGTCCACCTCGCCATTTTAGCAGCTCAAAGGTATTCTTATATCGAATCCTTCTTTCGCTCTTCAATCCTCCTCCTCCCTCTCTATTACAATACGCTCCATAGTAAGCTTCGTAGATGCATTTCTCTCGTCTTTTTCCTATCTTGTTGTTAGATTGATTCGTAGATGCATTTCTGATTGTAATGGAATTCAGTGAAGAAATCAATGGAATTAGAAAATGGCTGTGCGATATGTATTGCTCAGTAATCGAATGCACTGTGTTATATCGCTGGAGTTTTGTAGTAATTGTGTCTGGTTTAGCTGTGGTCTCAGTCGGTGATTGGGGACTAGGAAGGAGAGTTGTTTTTGGATACGTGTTCAATCTTGTGGAGAAAGTAAGATCTTATTCTTCTTAGTTCTAAAGTTAATGATTAAAAATGGATCAATGGAGAAAGGAGTGAACAGTGTAGTTCTTTGTATTTCTTTTCCTTCCAATTCTTGAATCATGTACTCTGCATAAGTTGAGTGGTAGAACATCCTGTTTCTGATATTAGATTTTATGCTTTCTATCGATGAACTATTCTCTTGTTTTATATCTGATTTTTGTCTGTCTGATAATGAATGTAGAGCGCTGATGGTTGCTATCTATGTATTGCAGCTAGCTCTTGAATTGATCTTTAGCTTTCTTGAAGATTGATTGAAAGACACTTCCAGTTCATTTTCCCCCGACTTCGAACTAATGATTCGATGAACTTTACCTGCAGGCTGCAATTTTATAACGATTTGAGCTTTCCTAGTTAATCATGTCTGAGCATATCAAAGAGACTGGACGAGTGGACGGAGATGGACATGTTGGATCTCAAGAATCTATGTCTTCCTCTCGGAAGGAGGTTCGTGACTTCATACATACGCATTTTCGATTTGTAGAAGTTGATAACTAATTTTCTCTACAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGTGATTTGTTACCTGTAAAAAATTATGCATTCTTTCAGTATGATTTTCAATGAAATCCATGCATTCTTCCATATGGATGTCTAAAGCTTTTGAATCTCAACTTCAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGTATTTATATTGTATCGCTCGTAACACCATTTTTACTCGATCTCGAAATTGGTTTGCATAACTTCACCTATTGGCTAATATATCCTCCATATTTTGGCTAATGGCAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCCCTTCGGCCAAAATTACAGGTTGGTAAATAATGTGCTTACTGATTTTGTCTCAGGTATGCAACCTTTGATATTATTTTAGGGTTGAGATCTTGAACACATGCACTGAACAGAGTGGTTGTATTTCTCAAAATTTAGACCTTGACCTCTTGAATAAAAGATTAGGGCATAACAGTTTTAACTTCAAATTCTCAAATTCCCAAATTTAGTATCCAGTAGTTAATATTTAAATTTAGTATCTTGCTTGATTTTTTTTCTTGGAGAAATTTAGAATGTTAAAAGTGAAACTTCATTACCTCCATTCATGAATACTTATAATAGTAGACATGGCTTTAATCCATGGAAGGATGGTGCTGCCATTACCATATCTGCTACTATTTTTGCTTAAATTCAAGCATAACCCAGTACTTTAACAAGGCATCTATACAAATATTGTGAAACGATTTGTTAGTCTGGTAATTTTTTTGTTGCCTTTTTTATTTTATTTTTATTTTTTTTATTTTATTATAATTACTATCATCAAGTAGGAGTAGGACTTATGTGATTGCTATTTTTTTTTCCTCTTGCATAGCCAACACAACAGCAAACTCGATACCGGAAGTCTCCTTATGCTCCATCAGACGGCGAAGGTATACTCACCTATTCAAGCTTTAACTAAAACGATCAATCTCGATAGGTCCTTGAACTTTAAAATTTTGTGCCCGAACTTTTAATTGTCTAATAGGAATTGATTGTTTGGTTCTTAGTTTAACCTCTATGTGGCTTGTTAACTATATTATATAAGGATTACACAGCCAGTTGATTTCAAGCTGTATGTTGATGTAAATGTTAAATGCAGACAAAATATTATTTTAGGAGCCTATTAGAAAATTTTTAAGGACTAAATAAACTATATTCTAATATGATTGCGGTATATTTATTCACACAGATGGAGGAACTGCTCCAAATGAATTTGCAACTTCGAACGAATGAAGCGTTGCTTGTGCTCGTTGTACCTGTTGTATCGTATCTCACTCCTGTTGAATGCCTGCTTAGGTATGAGCAATTTTCTTTTGTTTTTTAGAATACAATTGCTCGGGTTCGGGGTTGGTTATTGTGCTTACATTAAGAATGTGTATTGTATGGAGGATGATAGCTACATTCATCTATTTCATATTTGTCATTGATGACAAATATTATGACTGACCTTACGAGTCAAATTCAAGAATGATGTAGTAAATCTGTGAGATATGTGTATTGTAGACCATATGCCTTCATCCTGCCTTTTAAAAAAAGTTGTCTTTTCGAGTTACTTGGATTGATTTAGTCTTTAAACTTTTAAAAAAAGGGTTCAAAATTGAATTTCGATGTATATTTTTATTTAGTCTCTATCGGCGACACGTCT ACAAACAAAACAAAACAAAAACAAATAATTTGGATCTGTGGTTCGAGCAGATCAGATCATCGTCTTCGTCCACCTCGCCATTTTAGCAGCTCAAAGGCTGCAATTTTATAACGATTTGAGCTTTCCTAGTTAATCATGTCTGAGCATATCAAAGAGACTGGACGAGTGGACGGAGATGGACATGTTGGATCTCAAGAATCTATGTCTTCCTCTCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCCCTTCGGCCAAAATTACAGAGTGGTTGTATTTCTCAAAATTTAGACCTTGACCTCTTGAATAAAAGATTAGGGCATAACAGTTTTAACTTCAAATTCTCAAATTCCCAAATTTACCAACACAACAGCAAACTCGATACCGGAAGTCTCCTTATGCTCCATCAGACGGCGAAGATGGAGGAACTGCTCCAAATGAATTTGCAACTTCGAACGAATGAAGCGTTGCTTGTGCTCGTTGTACCTGTTGTATCGTATCTCACTCCTGTTGAATGCCTGCTTAGGTATGAGCAATTTTCTTTTGTTTTTTAGAATACAATTGCTCGGGTTCGGGGTTGGTTATTGTGCTTACATTAAGAATGTGTATTGTATGGAGGATGATAGCTACATTCATCTATTTCATATTTGTCATTGATGACAAATATTATGACTGACCTTACGAGTCAAATTCAAGAATGATGTAGTAAATCTGTGAGATATGTGTATTGTAGACCATATGCCTTCATCCTGCCTTTTAAAAAAAGTTGTCTTTTCGAGTTACTTGGATTGATTTAGTCTTTAAACTTTTAAAAAAAGGGTTCAAAATTGAATTTCGATGTATATTTTTATTTAGTCTCTATCGGCGACACGTCT ATGTCTGAGCATATCAAAGAGACTGGACGAGTGGACGGAGATGGACATGTTGGATCTCAAGAATCTATGTCTTCCTCTCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCCCTTCGGCCAAAATTACAGAGTGGTTGTATTTCTCAAAATTTAGACCTTGACCTCTTGAATAAAAGATTAGGGCATAACAGTTTTAACTTCAAATTCTCAAATTCCCAAATTTACCAACACAACAGCAAACTCGATACCGGAAGTCTCCTTATGCTCCATCAGACGGCGAAGATGGAGGAACTGCTCCAAATGAATTTGCAACTTCGAACGAATGAAGCGTTGCTTGTGCTCGTTGTACCTGTTGTATCGTATCTCACTCCTGTTGAATGCCTGCTTAGGTATGAGCAATTTTCTTTTGTTTTTTAG MSEHIKETGRVDGDGHVGSQESMSSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQGVEKPKGPLEALRPKLQSGCISQNLDLDLLNKRLGHNSFNFKFSNSQIYQHNSKLDTGSLLMLHQTAKMEELLQMNLQLRTNEALLVLVVPVVSYLTPVECLLRYEQFSFVF Homology
BLAST of Cp4.1LG02g16820 vs. NCBI nr
Match: KAG7017958.1 (hypothetical protein SDJN02_19824, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213 bits (543), Expect = 9.65e-68 Identity = 122/172 (70.93%), Postives = 129/172 (75.00%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. NCBI nr
Match: XP_023524491.1 (uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo] >XP_023524492.1 uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo] >KAG6606992.1 hypothetical protein SDJN03_00334, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036694.1 hypothetical protein SDJN02_00314 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174 bits (440), Expect = 1.26e-52 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. NCBI nr
Match: KAA0047355.1 (ribosome biogenesis protein erb1 isoform X2 [Cucumis melo var. makuwa] >TYK14033.1 ribosome biogenesis protein erb1 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (424), Expect = 1.43e-50 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. NCBI nr
Match: XP_022998669.1 (uncharacterized protein LOC111493254 [Cucurbita maxima] >XP_022998670.1 uncharacterized protein LOC111493254 [Cucurbita maxima]) HSP 1 Score: 168 bits (426), Expect = 1.69e-50 Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. NCBI nr
Match: XP_008457105.1 (PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo] >XP_008457106.1 PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo] >XP_008457109.1 PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo] >XP_016902056.1 PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo]) HSP 1 Score: 167 bits (424), Expect = 3.41e-50 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. ExPASy TrEMBL
Match: A0A5A7U139 (Ribosome biogenesis protein erb1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00010 PE=3 SV=1) HSP 1 Score: 167 bits (424), Expect = 6.93e-51 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. ExPASy TrEMBL
Match: A0A6J1KD47 (uncharacterized protein LOC111493254 OS=Cucurbita maxima OX=3661 GN=LOC111493254 PE=3 SV=1) HSP 1 Score: 168 bits (426), Expect = 8.21e-51 Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. ExPASy TrEMBL
Match: A0A1S3C4C3 (uncharacterized protein LOC103496861 OS=Cucumis melo OX=3656 GN=LOC103496861 PE=3 SV=1) HSP 1 Score: 167 bits (424), Expect = 1.65e-50 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. ExPASy TrEMBL
Match: A0A6J1GB43 (uncharacterized protein LOC111452406 OS=Cucurbita moschata OX=3662 GN=LOC111452406 PE=3 SV=1) HSP 1 Score: 167 bits (422), Expect = 3.33e-50 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. ExPASy TrEMBL
Match: A0A6J1J4D2 (uncharacterized protein LOC111482517 OS=Cucurbita maxima OX=3661 GN=LOC111482517 PE=3 SV=1) HSP 1 Score: 165 bits (418), Expect = 1.12e-49 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. TAIR 10
Match: AT5G64130.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 123.2 bits (308), Expect = 2.1e-28 Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. TAIR 10
Match: AT5G64130.3 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 109.4 bits (272), Expect = 3.1e-24 Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. TAIR 10
Match: AT1G69510.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 101.3 bits (251), Expect = 8.3e-22 Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. TAIR 10
Match: AT1G69510.3 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 101.3 bits (251), Expect = 8.3e-22 Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Cp4.1LG02g16820 vs. TAIR 10
Match: AT1G69510.2 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 101.3 bits (251), Expect = 8.3e-22 Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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