Cp4.1LG02g16770 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g16770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG02: 12631197 .. 12634581 (-)
RNA-Seq ExpressionCp4.1LG02g16770
SyntenyCp4.1LG02g16770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAATTGAATAAGAACCTCTGGTTTACCGATTCCACGGATTCAGCTCCTCAAATAGAAATTAGAACGAACTCCTGATTTCATCTATCACTGTTACAGAAATCTACCATTCCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATCTATACAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTCAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTAACGCCTAAGTTGTTTGTAGTTCTTCCGATTTCATTTCCGTTTTTCGTTTCTGTGATGTACAATTTGAGTGTGTTAAAAGCTTTAGTTTCTTCTCTGCTTTTGATTTGATTATGATTTGTAGTCACCGTTTAGTCAGTTGTACAATGTGCTTCTTGATGGAAACTGGAAATTACATACTCCAATGTATGATTTTGTTTGCATTCCCAATAATCCTACCCTTAATAGGCATTCCATCTGTCCAATTCTCTGGCTTCACCTAGAGTTTGCTCTCATTCAGGACACAACTCCTCTTCTTTAGAGTACACCGCGTATTCGATAGAGCTCCACCACGAATCACATTGTGGATTACACAGCGTAGACCATTCCTTAGCATACCCTTAGCAATCCTCCCCTCAAACACACTTGTTTGACATTTGAGGATTCATCCACAATCCTACATGACTATGTCTATTTGAGACTATCACTTCGTTAGGTATTAGAGAATTTTACTAGACATGGCTAAGTCAGGGGCATGGTTCTTATACCACTTATCATGGACATAATCTTCCTATCGTGTGATGCCATGATATATACTCGCTCATGGCTATTCTTGAGGTGAACTCAAACCCCAACTCTTTCACCCTTTTTGTGGCTTCTTCGGACCTTAGGTGAACCCCAACTCTTTCACCCTTTTTGTGGCTTCTTCGGACCTTAGGTGAGGTTCCTTTGTCCTCAATCAAGTTTTATTTCATGTTCAACGCAGCCTTCTTCGGACCTTATGTGATACTTTGTTCGCATTCCTAACCTTCTCTTCAATTATGTTTTGGTACTTATTTCATAGTTTAAGTCCCTAGTCTTTACTTACAAAATGCCATATTAGTCCTTAAATTTTTAAAAAGTCACAATTTTGGTCCTTGTCAGGACCAAAAGGATTACTTTTTAAAATTTAGACATTTTGAAAATCAAGAATCATGTTGAAATAGTCCTAATAATCGAGGAACCAAAATGTTAACATCCAAATTTAGTTGTGCTTTGTTCAACTTCATAGCCATTTTGCGTTTCCATTTGTACAATTTAAATGCGTTTATTTAAAGCTTTGGTTGCTGCTCAGCTCTTGATTTATCCATGATTTGTAATACTTGTGTTAGTTGTAATCAAGGTGCTGCTTCATGGACACTGTAAATTGAAGGTTTATAACCTATTCTCTCATCAATTTACTTTTGGTACTTCTTTTACTTCAAATACTTGTAGATATCTGTTCATGATGCAAACAAATTAAACTTATGTTGTGTTAGGTCTCCGTTACATTATATACAAAAATATCATGATCAGGGGTTAAATAGTTTTTCTTACGAAGTTAAAAGTAGAATATATGAAAGATTAGGAACTTCCTAAACTGAAATAAGTTAAAATTCCCGAAAAAAATTGGATTTGGATCCAAATTCTAGCTCTTTACCACTGATGACTTTTTTGGCCTCTGCAAGTAAAAGCCATCTGCTTTCCCTTTTGGTTGAGTTGCTTTAAACAATAGCTTTAATCGCTTGGATTTTGAAAGCATTTACAACAACGAAACAAAGAACAAAAAACAAATAGGTATCAAACATGGCCTTAGAAATTGTGAATAATTCAAACCTTGTGATAACCAAATTTATGCTGACCGATATCGATTGGATTATCGAAAGACTGAGATTGACTGTGAAACTCAAAAATGTTCTGTTGAATCACTCAAAACGAGAAGGTTGGAATAATTTTGAGGATTGGAGATAGACTACAATTCAATTTACTACTTCCAAATCATTCTTGATTTCTTTCTGAAGGTTCAAGTTTCAACTTCTCGAGTCACTAATTGATTCCTACCTTGATTTGCACGTATTTTCTGCTCAAAACCATAACCTATTCCTGTGTTATTCTTTCTTTATACAGGTGAAACAAAGCGCAAGTTTGAAAGTGTACACACGGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAATACCATAGATCGAACCGACAACCTTTCTCAAGGTCCCCTTCTTTCATGTAAGTCTTTAATTTCCTTTTCTTCATGAAATCATGTGTACATATTCATATCCTATCTGAAATGTTGGGTTGGGTAAATTTTTTTTTATCATCTTTCATTTGGAAATTAAGAGAATATCATTTTCGAAGATATTAAGTTTCAATTTATGTCTTCCTATTATGTAAAATATATCATATTTTCTAGTCATAATTCTCGGATATACCTCTTGAAATTGTCATTCTCAACATCATGATCTTTTCTTTCGTTTGATGCCATAAATGGGGTATGAGAATTTGAACCTTCTAACCTTGAAAGAAGAAATACATGTCAATTACTAATGAGTGACTTAAATTTGTTAGGGGTGAAAGAGGAAATTCTCTCTAAAAAAGATGCGTCGATTTTGTACATCGCATTACAATTTGTTTTCTTCAATTTTGTTAATGTCATCTTGATAGCCTACTAAAGTTAGCGAGATGCATTGTGGTGTGAATTACTTAAAATACCTATATAAATTAATTGAATTTACCAAATTTACGCAAACACACCAAATACTTGAATTTCAAATTCAATGCAATGTTCAATGCATTTGCTCACGTAATAATTTAAAAGTTTAGGGCTATTTTTGTCATTTCATTAGAGTAGAAAAAGGACATTGGGGCCCTATAAATAGACGAGGGTGATATGAAGGAAGATCACCAGAGCAGTGCTTTGAAGGGGGCATATGAAAGCAAGAAGGTAAAGTAGTTGTCCATACGTCGTCGTTTTGGGTGGTCAAAAGAATGGTAACTAGCTTCCCTTTGTTGACAGTGGGTAAAAAGGTGCCTCTAAAGATGAGACTCCATTTAGTTACCGTCAGCAAAGTGGAAGCTAGTGCTTCAAATTTACCGTTGACCCATTTTCACCATTTTTTTTTTATTTTT

mRNA sequence

CAAGAATTGAATAAGAACCTCTGGTTTACCGATTCCACGGATTCAGCTCCTCAAATAGAAATTAGAACGAACTCCTGATTTCATCTATCACTGTTACAGAAATCTACCATTCCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATCTATACAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTCAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTGAAACAAAGCGCAAGTTTGAAAGTGTACACACGGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAATACCATAGATCGAACCGACAACCTTTCTCAAGGTCCCCTTCTTTCATAAAAAGGACATTGGGGCCCTATAAATAGACGAGGGTGATATGAAGGAAGATCACCAGAGCAGTGCTTTGAAGGGGGCATATGAAAGCAAGAAGGTAAAGTAGTTGTCCATACGTCGTCGTTTTGGGTGGTCAAAAGAATGGTAACTAGCTTCCCTTTGTTGACAGTGGGTAAAAAGGTGCCTCTAAAGATGAGACTCCATTTAGTTACCGTCAGCAAAGTGGAAGCTAGTGCTTCAAATTTACCGTTGACCCATTTTCACCATTTTTTTTTTATTTTT

Coding sequence (CDS)

ATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATCTATACAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTCAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTGAAACAAAGCGCAAGTTTGAAAGTGTACACACGGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAA

Protein sequence

MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Homology
[Close]
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match: XP_023522633.1 (uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295 bits (754), Expect = 6.61e-101
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC
Sbjct: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 121 PFDPGCTAAPHSSYDDV 137

[Close]
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match: XP_022997797.1 (uncharacterized protein LOC111492645 [Cucurbita maxima])

HSP 1 Score: 292 bits (748), Expect = 7.92e-100
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIY IRSSANSSNQLTLRTC
Sbjct: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 132 PFDPGCTAAPHSSYDDV 148

[Close]
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match: XP_022948602.1 (uncharacterized protein LOC111452227 [Cucurbita moschata])

HSP 1 Score: 280 bits (717), Expect = 2.92e-95
Identity = 131/137 (95.62%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANS K   IRSSANS++QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 121 PFDPGCTAAPHSSYDDV 137

[Close]
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match: KAG6606995.1 (hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278 bits (711), Expect = 2.40e-94
Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFIS HSEVRDFRSGCLNRTSKLSANS K   IRSSANS++QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISIHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 121 PFDPGCTAAPHSSYDDV 137

[Close]
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match: KAG7036697.1 (hypothetical protein SDJN02_00317 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277 bits (708), Expect = 6.88e-94
Identity = 129/137 (94.16%), Postives = 132/137 (96.35%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFIS HSEVRDFRSGCLNRTSKLSANS K   IRSS+NS++QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISIHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSSNSNDQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 121 PFDPGCTAAPHSSYDDV 137

[Close]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match: A0A6J1K626 (uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 3.84e-100
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIY IRSSANSSNQLTLRTC
Sbjct: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 132 PFDPGCTAAPHSSYDDV 148

[Close]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match: A0A6J1G9P5 (uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC111452227 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 1.41e-95
Identity = 131/137 (95.62%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANS K   IRSSANS++QLTLRTC
Sbjct: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDDV 137
           PFDPGCTAAPHSSYDDV
Sbjct: 121 PFDPGCTAAPHSSYDDV 137

[Close]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match: A0A0A0L8V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 8.79e-81
Identity = 115/136 (84.56%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MA NLHC   SA FIS HS+    RS  LNRTSKLS+NSPKI TIR SANS+NQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVH+GGTMDTPDSGKV QYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDD 136
           PFDPGCTA+PHSSYDD
Sbjct: 121 PFDPGCTASPHSSYDD 136

[Close]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match: A0A6J1CNX1 (uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013199 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.05e-77
Identity = 112/138 (81.16%), Postives = 118/138 (85.51%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRD--FRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLR 60
           MALNLHC C S RF+    +      RS  LNR SKLSA+S K +TIR+SANS+NQLTLR
Sbjct: 1   MALNLHCYCSSTRFLPLTPKAPSEVLRSDRLNRASKLSADSTKFHTIRNSANSNNQLTLR 60

Query: 61  TCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGS 120
           TCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKV QYWHCCGS
Sbjct: 61  TCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGS 120

Query: 121 EDPFDPGCTAAPHSSYDD 136
           EDPFDPGCTAAPHSSYDD
Sbjct: 121 EDPFDPGCTAAPHSSYDD 138

[Close]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match: A0A1S3C5F2 (uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 5.02e-71
Identity = 106/136 (77.94%), Postives = 111/136 (81.62%), Query Frame = 0 

Query: 1   MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYTIRSSANSSNQLTLRTC 60
           MA NLHC   S  FIS HS     RS     TSK  +NS K  +IR SANS+NQLTLRTC
Sbjct: 1   MAPNLHCYHSSPPFISLHSYPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 120
           RNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH GGTMDTPDSGKV QYWHCCGSED
Sbjct: 61  RNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTAAPHSSYDD 136
           PFDPGCTA+PHSSYDD
Sbjct: 121 PFDPGCTASPHSSYDD 136

[Close]
BLAST of Cp4.1LG02g16770 vs. TAIR 10
Match: AT5G38060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 171.0 bits (432), Expect = 6.6e-43
Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 0 

Query: 31  RTSKLSANSPKIYTIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKR 90
           +T KL  NS + ++  ++++S    TLRTC+NCK QFDP LN+PRACRFHTAHFGGETKR
Sbjct: 31  KTPKL--NSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTAHFGGETKR 90

Query: 91  KFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 137
           KFESV+TGGTMDTP+SGKVLQYWHCCGSEDPFD GCTA+PH++YDD
Sbjct: 91  KFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134

[Close]
BLAST of Cp4.1LG02g16770 vs. TAIR 10
Match: AT5G38060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-33
Identity = 66/106 (62.26%), Postives = 80/106 (75.47%), Query Frame = 0 

Query: 31  RTSKLSANSPKIYTIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKR 90
           +T KL  NS + ++  ++++S    TLRTC+NCK QFDP LN+PRACRFHTAHFG     
Sbjct: 31  KTPKL--NSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTAHFG----- 90

Query: 91  KFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 137
                  GGTMDTP+SGKVLQYWHCCGSEDPFD GCTA+PH++YDD
Sbjct: 91  -------GGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 122

[Close]
BLAST of Cp4.1LG02g16770 vs. TAIR 10
Match: AT1G65000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 28/83 (33.73%), Postives = 40/83 (48.19%), Query Frame = 0 

Query: 58  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVLQYW 117
           + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++
Sbjct: 8   KLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYE-------LKPDDPPYAAKFY 67

Query: 118 HCCGSEDPFDPGCTAAPHSSYDD 137
            CCG+EDP  PGC   PH SYDD
Sbjct: 68  DCCGAEDPNAPGCVTNPHISYDD 83

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g16770 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g16770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023522633.16.61e-101100.00uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo][more]
XP_022997797.17.92e-10099.27uncharacterized protein LOC111492645 [Cucurbita maxima][more]
XP_022948602.12.92e-9595.62uncharacterized protein LOC111452227 [Cucurbita moschata][more]
KAG6606995.12.40e-9494.89hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7036697.16.88e-9494.16hypothetical protein SDJN02_00317 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG02g16770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K6263.84e-10099.27uncharacterized protein LOC111492645 OS=Cucurbita maxima OX=3661 GN=LOC111492645... [more]
A0A6J1G9P51.41e-9595.62uncharacterized protein LOC111452227 OS=Cucurbita moschata OX=3662 GN=LOC1114522... [more]
A0A0A0L8V58.79e-8184.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185090 PE=4 SV=1[more]
A0A6J1CNX11.05e-7781.16uncharacterized protein LOC111013199 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A1S3C5F25.02e-7177.94uncharacterized protein LOC103496857 OS=Cucumis melo OX=3656 GN=LOC103496857 PE=... [more]
BLAST of Cp4.1LG02g16770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G38060.16.6e-4372.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G38060.21.6e-3362.26unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G65000.11.8e-0833.73unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35106BNAA07G25190D PROTEINcoord: 29..136
NoneNo IPR availablePANTHERPTHR35106:SF5CARBOXYPEPTIDASEcoord: 29..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g16770.1Cp4.1LG02g16770.1mRNA