Cp4.1LG02g16460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCCTTGGACACGTGGTGTGTGTTGGACAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGGAGAAGATGAAAGAAGTACGGAGATGGCGGCGTGGGTCCCAGATCCGGTCACCGGCTACTACCGGCCGGAGAAACGTAATGAATTGAAGAAAAGGAAAAACGTTTTTATTAATTTTCATTTAATACTTTAA ATGCAATCCTTGGACACGTGGTGTGTGTTGGACAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGGAGAAGATGAAAGAAGTACGGAGATGGCGGCGTGGGTCCCAGATCCGGTCACCGGCTACTACCGGCCGGAGAAACGTAATGAATTGAAGAAAAGGAAAAACGTTTTTATTAATTTTCATTTAATACTTTAA ATGCAATCCTTGGACACGTGGTGTGTGTTGGACAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGGAGAAGATGAAAGAAGTACGGAGATGGCGGCGTGGGTCCCAGATCCGGTCACCGGCTACTACCGGCCGGAGAAACGTAATGAATTGAAGAAAAGGAAAAACGTTTTTATTAATTTTCATTTAATACTTTAA MQSLDTWCVLDRRGYRAGATAAEGVTARSGGMIKKGEDERSTEMAAWVPDPVTGYYRPEKRNELKKRKNVFINFHLIL Homology
BLAST of Cp4.1LG02g16460 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06 Identity = 27/59 (45.76%), Postives = 34/59 (57.63%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.9e-05 Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.1e-05 Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy Swiss-Prot
Match: Q39644 (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-04 Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. NCBI nr
Match: KAG6606955.1 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 89.7 bits (221), Expect = 3.36e-21 Identity = 47/65 (72.31%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. NCBI nr
Match: XP_022949042.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 87.0 bits (214), Expect = 3.80e-20 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. NCBI nr
Match: KAG7036659.1 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 88.2 bits (217), Expect = 8.80e-20 Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. NCBI nr
Match: XP_038903721.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 70.9 bits (172), Expect = 1.03e-13 Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. NCBI nr
Match: TXG63409.1 (hypothetical protein EZV62_010403 [Acer yangbiense]) HSP 1 Score: 68.2 bits (165), Expect = 8.98e-13 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy TrEMBL
Match: A0A6J1GAX2 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452505 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.84e-20 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy TrEMBL
Match: A0A5C7I398 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010403 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.35e-13 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy TrEMBL
Match: A0A6J1F2C1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441545 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.04e-12 Identity = 35/55 (63.64%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy TrEMBL
Match: A0A0A0KTB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001850 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.62e-11 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. ExPASy TrEMBL
Match: A0A6J1J9I8 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482498 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.40e-11 Identity = 34/55 (61.82%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 ) HSP 1 Score: 48.5 bits (114), Expect = 2.8e-06 Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 48.1 bits (113), Expect = 3.7e-06 Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of Cp4.1LG02g16460 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 ) HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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