Cp4.1LG02g16220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g16220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-CH-type domain-containing protein
Location	Cp4.1LG02: 12952582 .. 12955019 (+)
RNA-Seq Expression	Cp4.1LG02g16220
Synteny	Cp4.1LG02g16220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGTGCGTTGCGTTAAGGTCCTCCATCCAGCGCCTCTAAAAGAAAAGTCCACGTCGGTCCCCCATAAACAAAGGGCATTTTGGGAAATTCACATTAATCTCTTTTATTTAAAGATGAAAGAAAAAAAAAATCCACAAAAGAGGGAAGGGAAACCAGAGAGCTTTTGAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCAAAAAATTAGTCGATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGGTAACCCCTAAATTCAAAAACCCCTTCAATCTTCTCCTTCTTCTGATTGTTATTAATATTCTTTTGTTTCCACCGGTTCAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGGGCAGCATAGTCTGTGAAATTTGCCTCCAGGTTCGGTTCTTCTTAGCTTTTCAGCTTCTGGGTCGGTTTTTTTCTTCAAAATTTCAACTGGGTTTTCGTTGATTTTGAGTTTTACACACCTCGAGCTTGTTTTCCAGAGCTCTGTAATGGGTTTTTTTAAGCACAGCTGGTTGATTTTGAGTTTGGTTTGATTTGGTTTGGTTTGGTTTTCTATGGGATTCTGGAATTCGTCTTCTTCTCTGTTAAATTTACGATTTATTTTAATTTTTTTTTAAAATATATAATTACTAATTTCTCTTATAGAAATTAATGTGTTATTGAATTGAACCATGGGTACTTTGGTAATTTCACATATCTATATTTGTATATGCATTTTATGAAAAGAATTCAGTGTATTATTTGTCAAGTTAATTAATTTGAAGAAAATACATTTTTTTTTTATTTTTTTAAATTAATATTTTAATAAATAAATGTCCGGAGAATAAACCAAGATTTAAGTCTTCTGACTTCTCCGCGTATTGTTAATGAATTTATTATTAAATGCTTTATTTTTTTTAAATTTAGGGAAGAAAATAAAATAGTGATAATAATAATTATTTTGTAGAATTACGAGCCGGGCTATACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGGTATTTTTTTAGTTAAATTATAAATTTGGAAATGGGAGATTTCTTAAAGCGCGAGCCAGACATGCTTTACAGCCAATTCATCGGCTCTGCTGGCGATTTTTTCGAATATTTAGGAATCAAATTAATTAATTAAATTGAAATTCTAAGAAATGGATTTGCAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGAGGCGGCGGAGCCCGCGTCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGCTTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCGTAAGTTCCTCGGTCAATGAATATTCTCTGCCCGTTTTTCTAATTTCTTCTAATATTAATTAAATTCTTAATTTAACCTTAATCACTACTTTAAATTAGATTAGTAGCCGTTTATTTAATAATTTCACCCACTATTTATTTATTTATTTAACTTAATTAAAGTAATATTTATATATATATATATATATATATATATATATATATTTTTTTTTTATGCAGTTCACTTTAGTATTGTTGGTGAGACATTTCTATGATGTTCTAGCTGTTGGCGCGGGAGATTATCCATTTACGCTCGCCACGGTTAGTACCCGATTCGATTCGACTCTTCCTATGCTCGAGAATATTACTTTTACGGTCAAAATATCATTTTGGTCTCGATGTTGTGTACTAATTAAGCGATTTATTCTTAGGTGCTTCTTTTAAGAGCAAGTGGGATCATTTTCCCTATGTACGTGATAATTCGAGGTATCACCACCGTTCAAAACAACATTCGTCGAAGTCGTTATCGGTACCGATATCGAGATCAGGTGAGCTTTTTTAAAAACTAAAATTTGAAAGCGTTGAGGAATGAGGAAAATGTCGGAGGTGTTTTCATGGCTGACTGTGAGTTTCGGTATCGTGTTTGAATTAGGATTCTGATGACGACGAAGATGATGATATTTCGAGGTTTGAAGATGATGAAAGAAGGCTCCATCATATTGTCTAAAGCTTTATACAGACTTTTTTTTCTTTTGTTCTAATTAATTTAATTTTATTTCGATAATTTAGTTTATTTTTCACTCTGTATATTATTGGAGTGGGTAATGAATTTTTACCTTCGTGAAATTTAGTTTTTAATGTTTTTATTTCAATAAATATAGAAAAATTAATGTCCTTGTAACTCGACATGGACCCGACTTTGGTCGATAAAGAATACATTTTTTTAGTTAAAAGTTGAACGGATTAACTAAAAGGAAATGTCGACCTCAGACAGC

mRNA sequence

GCGGTGCGTTGCGTTAAGGTCCTCCATCCAGCGCCTCTAAAAGAAAAGTCCACGTCGGTCCCCCATAAACAAAGGGCATTTTGGGAAATTCACATTAATCTCTTTTATTTAAAGATGAAAGAAAAAAAAAATCCACAAAAGAGGGAAGGGAAACCAGAGAGCTTTTGAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCAAAAAATTAGTCGATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGGGCAGCATAGTCTGTGAAATTTGCCTCCAGAATTACGAGCCGGGCTATACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGAGGCGGCGGAGCCCGCGTCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGCTTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCTTCACTTTAGTATTGTTGGTGAGACATTTCTATGATGTTCTAGCTGTTGGCGCGGGAGATTATCCATTTACGCTCGCCACGGTGCTTCTTTTAAGAGCAAGTGGGATCATTTTCCCTATGTACGTGATAATTCGAGGTATCACCACCGTTCAAAACAACATTCGTCGAAGTCGTTATCGGTACCGATATCGAGATCAGGATTCTGATGACGACGAAGATGATGATATTTCGAGGTTTGAAGATGATGAAAGAAGGCTCCATCATATTGTCTAAAGCTTTATACAGACTTTTTTTTCTTTTGTTCTAATTAATTTAATTTTATTTCGATAATTTAGTTTATTTTTCACTCTGTATATTATTGGAGTGGGTAATGAATTTTTACCTTCGTGAAATTTAGTTTTTAATGTTTTTATTTCAATAAATATAGAAAAATTAATGTCCTTGTAACTCGACATGGACCCGACTTTGGTCGATAAAGAATACATTTTTTTAGTTAAAAGTTGAACGGATTAACTAAAAGGAAATGTCGACCTCAGACAGC

Coding sequence (CDS)

ATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGGGCAGCATAGTCTGTGAAATTTGCCTCCAGAATTACGAGCCGGGCTATACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGAGGCGGCGGAGCCCGCGTCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGCTTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCTTCACTTTAGTATTGTTGGTGAGACATTTCTATGATGTTCTAGCTGTTGGCGCGGGAGATTATCCATTTACGCTCGCCACGGTGCTTCTTTTAAGAGCAAGTGGGATCATTTTCCCTATGTACGTGATAATTCGAGGTATCACCACCGTTCAAAACAACATTCGTCGAAGTCGTTATCGGTACCGATATCGAGATCAGGATTCTGATGACGACGAAGATGATGATATTTCGAGGTTTGAAGATGATGAAAGAAGGCTCCATCATATTGTCTAA

Protein sequence

MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGASDSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFPMYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV

Homology

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.6e-08
Identity = 28/77 (36.36%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNY 73
           ET  D   CRICHE    +   L +PC CSGT+   H+ C++RW +   +  CE+C   +
Sbjct: 56  ETPSDGPFCRICHEG--ANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQLGDPG 91
                + S    L DPG
Sbjct: 116 AVEKRSRSLTEWLKDPG 130

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 7   YVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVC 66
           YVDD   E   DV  CRIC     ++   L  PCACSG+IKF H+DC+ +W     +  C
Sbjct: 57  YVDD--DEDEEDV--CRICRNPG-DADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQC 116

Query: 67  EICLQ--NYEPGY--TAPSKKP 85
           E+C    ++ P Y   APS+ P
Sbjct: 117 EVCKHPFSFSPVYADNAPSRLP 133

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot
Match: Q5I0I2 (E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 27/82 (32.93%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNY 73
           +T  D   CRICHE    +   L +PC C+GT+   H+ C+++W +   +  CE+C   +
Sbjct: 56  DTPSDCPFCRICHEG--ANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQ-----LGDPG 91
                A  K+P+     L DPG
Sbjct: 116 -----AVEKRPRPLTEWLKDPG 130

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot
Match: Q99M02 (E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 26/82 (31.71%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNY 73
           ++  D   CRICHE    +   L +PC C+GT+   H+ C+++W +   +  CE+C   +
Sbjct: 56  DSQSDCPFCRICHEG--ANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQ-----LGDPG 91
                A  K+P+     L DPG
Sbjct: 116 -----AVEKRPRPLTEWLKDPG 130

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 20/53 (37.74%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 22  CRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNYE 75
           CRIC +   +   +L +PC CSG+++  H  C+ +W +E+GS  CE+C   Y+
Sbjct: 143 CRICFQGPEQG--ELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQ 193

[Close]

BLAST of Cp4.1LG02g16220 vs. NCBI nr
Match: XP_023525490.1 (uncharacterized protein LOC111789080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458 bits (1179), Expect = 1.32e-162
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of Cp4.1LG02g16220 vs. NCBI nr
Match: XP_022998108.1 (uncharacterized protein LOC111492856 [Cucurbita maxima])

HSP 1 Score: 441 bits (1134), Expect = 9.26e-156
Identity = 225/231 (97.40%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGS VCEICLQNYEPGYTAPSKKPQLGDPGVSISDG QIPRSEQEEAAEPASPPADDGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGVQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR ITTVQ NIRRSRYRYRYRDQDSDD EDDDIS FEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQYNIRRSRYRYRYRDQDSDD-EDDDISSFEDDERRLHHIV 230

[Close]

BLAST of Cp4.1LG02g16220 vs. NCBI nr
Match: XP_022949158.1 (uncharacterized protein LOC111452590 [Cucurbita moschata])

HSP 1 Score: 441 bits (1133), Expect = 1.36e-155
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           K SIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDV+AVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR ITTVQN+I RSRYRYRYRDQDSDD+EDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of Cp4.1LG02g16220 vs. NCBI nr
Match: KAG6606942.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432 bits (1111), Expect = 1.74e-150
Identity = 217/219 (99.09%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDV+AVGAGDYPFTLATVLLLRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVIAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISR 219
           MYVIIRGITTVQN+IRRSRYRYRYRDQDSDDDEDDDISR
Sbjct: 181 MYVIIRGITTVQNSIRRSRYRYRYRDQDSDDDEDDDISR 219

[Close]

BLAST of Cp4.1LG02g16220 vs. NCBI nr
Match: KAG7036646.1 (hypothetical protein SDJN02_00266, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381 bits (978), Expect = 2.03e-132
Identity = 200/231 (86.58%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYD                             FAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYD-----------------------------FAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDV+AVGAGDYPFTLATVLLLRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVIAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIRGITTVQN+IRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRGITTVQNSIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 202

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL
Match: A0A6J1KFW1 (uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856 PE=4 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 4.48e-156
Identity = 225/231 (97.40%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGS VCEICLQNYEPGYTAPSKKPQLGDPGVSISDG QIPRSEQEEAAEPASPPADDGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGVQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR ITTVQ NIRRSRYRYRYRDQDSDD EDDDIS FEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQYNIRRSRYRYRYRDQDSDD-EDDDISSFEDDERRLHHIV 230

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL
Match: A0A6J1GB95 (uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC111452590 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 6.60e-156
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           K SIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDV+AVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR ITTVQN+I RSRYRYRYRDQDSDD+EDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL
Match: A0A1S4DZR9 (uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 6.60e-127
Identity = 186/234 (79.49%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           M E  +YV++FRF+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFRFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGS VCEICLQNYEPGYTAPSKKP   D GV+I DG +IPRSE EEAAEPASP   DGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHTDQGVTIRDGVEIPRSEDEEAAEPASPRDGDGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
            SACSTT +RGAS CKSVALTFTLVLLVRHFYDV+AVG  +YPFTLATVL+LRASGIIFP
Sbjct: 121 LSACSTTANRGASCCKSVALTFTLVLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYR---DQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR IT +QN++RR+RY+Y+YR   D D DDDE+DDIS FEDD+RRLHHIV
Sbjct: 181 MYVIIRTITAIQNSVRRNRYQYQYRNHEDFDDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL
Match: A0A0A0KT99 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 1.24e-126
Identity = 182/232 (78.45%), Postives = 203/232 (87.50%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           M E  +YV++F F+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDP-GVSISDGAQIPRSEQEEAAEPASPPADDGA 120
           KGS VCEICLQNYEPGYTAPSKKP   DP  V++ DG +IPRSE EE AEPAS P DD A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120

Query: 121 SDSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIF 180
           S SACSTT DRGAS CKSVALTFTLVLLVRHFYDV+AVG  DYPFTLATVL+LRASGIIF
Sbjct: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           PMYVIIR +T +QN++RR+RY+YRYR+ +  DD+DDDIS FEDD+RRLHHIV
Sbjct: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 232

[Close]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL
Match: A0A6J1F9U4 (uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC111442137 PE=4 SV=1)

HSP 1 Score: 362 bits (929), Expect = 8.05e-125
Identity = 175/231 (75.76%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+  LYV++F+F+TSY VSRCRICHE+E E+ALQLEAPC+CSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGQVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KGS VCEICLQNYEPGYT+PSKKPQ GDPGV+I D  QIPR+E+EEAAEPASPPAD GAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
           DS CSTTTDRGAS CKSVALTFTL+LL RHFY+V+ +    YPFTLATVL+LRASGIIFP
Sbjct: 121 DSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231
           MYVIIR I+ +QN+ R++RYRY+  ++   D +DDDISRFE+D+RR+HHIV
Sbjct: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231

[Close]

BLAST of Cp4.1LG02g16220 vs. TAIR 10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.7e-46
Identity = 101/228 (44.30%), Postives = 148/228 (64.91%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+ +L++D+   ++S+  +RCRICHEEE ES    EAPC+CSGTIKFAHRDCIQRWC E
Sbjct: 1   MGDVVLFIDETYLKSSF--NRCRICHEEEAES--YFEAPCSCSGTIKFAHRDCIQRWCDE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KG+ +CEICLQ Y+PGYT  SK  +  +  V+I D   I R E             + + 
Sbjct: 61  KGNTICEICLQEYKPGYTTTSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESD 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
              C++  DRGAS C+ +AL F+++LL++H +D +  G  +YP+T+ TVL L+A GI+ P
Sbjct: 121 FQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYTIFTVLTLKAIGILLP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLH 229
           M VIIR IT +Q ++   RY+    ++D+   E++D    E++E++ H
Sbjct: 181 MLVIIRTITAIQRSL---RYQILESEEDTLSSEEED-HGLEEEEQQQH 219

[Close]

BLAST of Cp4.1LG02g16220 vs. TAIR 10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 6.3e-46
Identity = 103/232 (44.40%), Postives = 152/232 (65.52%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+ IL++DD +  +   ++RCRICHEEE ES    E PCACSGT+KFAHR+CIQRWC E
Sbjct: 1   MGDVILFIDDTK--SKVRITRCRICHEEEEESF--FEVPCACSGTVKFAHRNCIQRWCNE 60

Query: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120
           KG+  CEICLQ Y+ GYTA  K+ +L +  V+I    +  R  +   +   S        
Sbjct: 61  KGNTTCEICLQVYKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIAES-------D 120

Query: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180
            S C++  DRGAS+C+S+  T ++ LL++H +DV+  G  +YPF++ TVL L+A GI+ P
Sbjct: 121 ISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFSVFTVLTLKAIGILLP 180

Query: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDD----DEDDDISRFEDDERRLH 229
           M++IIR I+T+Q  +RR   R++Y + + +D    D+DDD+   ED+E++ H
Sbjct: 181 MFIIIRTISTIQKTLRR---RHQYPESEEEDRLSSDDDDDLEE-EDEEQQQH 216

[Close]

BLAST of Cp4.1LG02g16220 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-28
Identity = 72/197 (36.55%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 19  VSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PC+CSG++K+AHR C+QRWC EKG   CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGASDSACSTTTDRGASYCKSV 138
           AP    +LG   +       I    Q E       PAD    D     ++      C+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGI---SQREHRFITVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFPMYVIIRGITTVQNNIRRS 198
            L F  +L++RH   ++  G+  + F L T+L LR  GI+ P+YV+ + + T +   R S
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCR---RHS 235

Query: 199 RYRYRYRDQDSDDDEDD 216
           R        DS D+E D
Sbjct: 236 RTLDTSPSDDSSDEETD 244

[Close]

BLAST of Cp4.1LG02g16220 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-28
Identity = 72/197 (36.55%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 19  VSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PC+CSG++K+AHR C+QRWC EKG   CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGASDSACSTTTDRGASYCKSV 138
           AP    +LG   +       I    Q E       PAD    D     ++      C+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGI---SQREHRFITVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFPMYVIIRGITTVQNNIRRS 198
            L F  +L++RH   ++  G+  + F L T+L LR  GI+ P+YV+ + + T +   R S
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCR---RHS 235

Query: 199 RYRYRYRDQDSDDDEDD 216
           R        DS D+E D
Sbjct: 236 RTLDTSPSDDSSDEETD 244

[Close]

BLAST of Cp4.1LG02g16220 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.5e-27
Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = 0


Query: 22  CRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKGSIVCEICLQNYEPGYTAPS 81
           CRIC +E       LE+PCACSG++K+AHR C+QRWC EKG+I+CEIC Q Y+PGYTAP 
Sbjct: 43  CRICSDE--SPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPP 102

Query: 82  KKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGASDS---ACSTTTDRGASYCKSV 141
              Q  +  + I  G  I   +  +    A   A+    +S     + ++  GA++C+S 
Sbjct: 103 PPLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSA 162

Query: 142 ALTFTLVLLVRHFYDVL--AVGAGDYPFTLATVLLLRASGIIFPMYVIIRGITTVQNNIR 198
           AL    +LL+RH   +     G  D P ++ +++LLRA+G + P Y++   I+ +Q   +
Sbjct: 163 ALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQRRRQ 221

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g16220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L65	8.6e-08	36.36	E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1	[more]
F4JKK0	1.1e-07	41.46	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]
Q5I0I2	1.6e-06	32.93	E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=...	[more]
Q99M02	3.6e-06	31.71	E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=...	[more]
Q0P496	3.6e-06	37.74	E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g16220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525490.1	1.32e-162	100.00	uncharacterized protein LOC111789080 [Cucurbita pepo subsp. pepo]	[more]
XP_022998108.1	9.26e-156	97.40	uncharacterized protein LOC111492856 [Cucurbita maxima]	[more]
XP_022949158.1	1.36e-155	95.67	uncharacterized protein LOC111452590 [Cucurbita moschata]	[more]
KAG6606942.1	1.74e-150	99.09	putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7036646.1	2.03e-132	86.58	hypothetical protein SDJN02_00266, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG02g16220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KFW1	4.48e-156	97.40	uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856...	[more]
A0A6J1GB95	6.60e-156	95.67	uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A1S4DZR9	6.60e-127	79.49	uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=...	[more]
A0A0A0KT99	1.24e-126	78.45	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00364...	[more]
A0A6J1F9U4	8.05e-125	75.76	uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of Cp4.1LG02g16220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02610.1	3.7e-46	44.30	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	6.3e-46	44.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	7.7e-28	36.55	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	7.7e-28	36.55	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	8.5e-27	37.57	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 21..70 e-value: 7.7E-18 score: 75.3
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 22..69 e-value: 3.5E-13 score: 49.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 14..76 score: 21.578274
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 75..187 e-value: 9.7E-27 score: 93.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 10..80 e-value: 1.1E-18 score: 68.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..124
None	No IPR available	PANTHER	PTHR23012:SF167	AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED	coord: 1..220
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 22..69 e-value: 5.15652E-19 score: 75.8268
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 17..74
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g16220.1	Cp4.1LG02g16220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding