Cp4.1LG02g15590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g15590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	UPF0114 domain-containing protein
Location	Cp4.1LG02: 13273391 .. 13279752 (-)
RNA-Seq Expression	Cp4.1LG02g15590
Synteny	Cp4.1LG02g15590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTGCAAATCCAACCCCAAGACTCAGGTAAAACCATTGACCAATGACTTCATTGTTTTCTTCGTCTTCGTCTTCATCTTCATCTCTCCCTCCATCTGTACTTTTAGTGTCTTGACATGTTACAGAAAGGGGTTCACCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCAGAAAAGGTTTGAAACTGATATCCAACAGGAATCTTTCCTGTCAAGTTATTGTTCGAGAGATTCAAATCACTCAACCATATTAATTTAGTCAAGCTAGGAGGAATGGGACCTGAGAACCTGTTGTTTGAGAGATCAAGATATGATAATTCTATCAGGTTTGAAATGTTCTCTGGAATCTGGCCACTGATATGATTTTGAGACAAGTTCAAGGCAATAAGCCCGGCTAACTCAGTTATATCTTGAGGTAAAACTCCATACAGTTCGTTCCCAGAGAGATCAATGCTTATTACAAGGGAAAGGGTCTTAGTGTACCTCAATAAGTTGCCTTTTGTGTTCAAGATGTAGTTTTCTTCGTAGTAAATGCTCCTGTATTTCCCGTAAAGTAGATATTGGTTTGTTGTCTGGCGTTGAAACATAGCTTTGAGACTGCTGAAACCAATTGAAATGGAACCATTCAACTTGTTTTGTGCCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGCTCCGGAAAATGCATTTGACCTCAAGGTGAGGATTCTCAGATTTGGAAAACTAGTTCCAATCCAAGGAGGAATACTACCGACAAGACCATTATTCCCAAGATTCAGTGTTTCCAGATTGGAGAGATTTTGGAAAGATGGTGGGAGCTTTCCAGTGAGCCTGTTTTCACTTAAATGTAGAGTCTGAAGCTGATTTAACTGACCCAAAGAGTCTGGAATTGGACCTACTAAATAGTTGTTCGCGAGGTCGATTGCCTTCAACAACGAACAATTCCCAATAGTTGAAGGAATTTTACCAGTCAAGTTATTCCCTGATAGATTAATGACCTGAAGAATCTGCATTTCCCCTACAGTATCTGGAATTTCACCTGTTATTTGATTATTAGCCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATTGAACCCGAGAATATGTTATTTGAAAGTTCGAGTGAAACAATCTCAAAGCTTGGAAGAGGAATCGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTATTTTCAGCGGGTTCGGTAGTCGTCCCTCTAACCGGTTGTAAGAAACGTTTAAAAGAGCTAGATTTGCTGAGATTTTCCAAAACCAGTTGGGAATGGGACCTGAGATGCTGGCATTTGAGAAATCCATGAACAGCACCGCATTTTGTGATTTGAGCCAAACTGGAAATGGAGAACCCAAGTAACACGAACCCATGTCAAGATTTCTGACTTGGAATGGAGGAACCCAATTGGAACTAACATTCAATCTCAAAGAATTCGAAGATAAATGTAAGATTTTCAGTTTGTTTAGCTTTGAAAAATGTGCTTCTGAGACTGTCCCTGTGAATTGATTGCTAGAAACATCTAAAAGAGACAGCTCAGAAAGCTGCCCTATACTCTCAGGGAGAGTCCCATTCAGCTTATTTCCTTGCAGCCCCAATGAAGACAACTTTTCAAGTGATCTGAAATCAACAATGGGACCTTGAAGTGAGTTATAACCCAAACTTAGTTCATTAAGATTTTCAAGTTGGCCTAACCACTCCGGCAATTCACCCACCAATTTGTTGTTGGACAGATCTAGATGCTCCAGGCTAAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGGTAACGTCCCGTTCAAATTATTACCCGATAATCGGAAAAAGTTCAGGTTGCAAAGCCTTCCGATGGTGCTCGGAATCCCTCCTTCGACGTTATTCCCTAAAAGATCAAAATAAGCAAGAGAACTCACATTTCCAATGGAGGATGGAAGCTTTCCATGAATCTTATTCTCAGCTAGTATAAGAACTTCCACCCTACTCCATCCTCTTTGAAATAACTGAGAGCAGCTCGCTGAGAGATTTCCATTCCCAGAAAGATCCAACGAGCGTAAACTGGGTAGATCACCGAGGCCGAGGGGAATTCTACCGTACAAATTACAATCACTCATACTGAGTGATGTCAGGCTACTAACATTCATAAGCCAAGTGGGTATCTGAGAATTGATATTGTTTCCAGTTAAATCAACAACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCTCCAGATAAGCCACAATCACTCATATGCAACTCAGTTAAGAATTTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGGGGAAAGATCCATGCTATCCATTGCAAGATACTTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTGGGAGGCAGTAAACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCGAAGAATTCAGGAACTGGAATATCATTGAATGTGTTAAAACTCAAATCCAAATATCTCAAAGACCTTAGTTTTGTGAGCGATGGACTTATCTCTCCACTAAGATTCCAGAATCCTTGCTCCCCTAAGGGATGTGGGTTATGAAGATCAATCACAGTAACAGCTCCAGTTCCATTGTTACACCCCACCCCTCTCCATTGGCAACAGTCCATCCCTTTCCATGACACGAGTCGATTCTCAGGATCGTTGAGGCCACTTTTTAAGGCAATCAAAGCTTCTCGATCGGAATCAAAACACCCTAGAGACTTTACATGAACATTACAGAAAAGAACTAGAATAGCTAATTGAAGAACTGGGCTCGTCGACATTGACACAACTTTCTCTCTGTTGCGAGGCCGAAGGAGATATTGAACGTGCTTCCCCACACGGTAATTTTAATATGATCTCTTCTCTTTGCAACCAATTTGGCTAAGATTGTTCTTGATTATCAGAATTCCATTTGTGTTCTTTGTCTGTGATTTAATTCTTTATGTAAGGTCAAATCTATGTAGAAGTTTTAGAATATAGAATGAGACAAACATATTTTAATAAAAATTGTGGAACAAGAAAGCTTAGGTTTTGAAGTTACTCAAACTGTTCGACTCATTTAAAATGAGTCAACGATTGATCGTATTCAGGCATGACTATGGGCACTTGCTCGTTGATAGAACATTTTCCTGTAAATTTTGACTTTCATGAATAAGACAGACAAGGGAGGAAGACAACAGGCGTAGTTTAAGAAACTATATTTTTAATTTATCTATTTTATTATGGATTGACCAAGCTGTCGAAGATGATATTGTTTTTAATTTTTTTTAATATCTTCTCTCTTATCTCAAAATTTATATTTATTATTCAAATTTTGGAGTTATATTTTATTTCTCTATTGAGTTTTAAATCCTATTAGTTTGAATATAGTTGATGAATAACTGTTGAGGGTGTTAATTAATGTTATTTTTTTAATTTTTTTTTAGTATTTCGCGGTAAAACCAGTTGGCTCTAAAATCAGACATAAACGTCGATTTCAAGTGCGAAGATGTGAATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGTTTTCCGCGATCTCCCCGCTGCCATTAGCCGTCTCCTTAGGGTTCCACCGCCTTCATTGTCCAACCACGGTGGGTCGTCGCTTTTCCTACCCTTGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCTAAATCAGCGAAAGCATCATCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTCGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGTTTCATCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTACTTGCTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTTTTTCAATTGGATTTTCATGTTCTTCCCCTGTCGAAGCTGAAAGTTTGTGCTGGCTATGAATTAAATACATAAACACTTTGAATCTGAACTCGTACACTGATTAATAGTTGAGAGTTCGGCCGTGGAGTAGATGCATATGAAAATTTTATGTTGTCACATTTCAAGCACTGTAGAAGTTGGATGGGCTGGTGCCAGAAAGGATACCCATTTAGGATTATTTCAGATGTTATTTTTAATTTTTAAAAAATCTCGAATTTCAGTTCTTTAATGGGTTAATGACTGTGCCTGTCTCACCTGATGTTAAGCAGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCCGGTTCACTCTTGTGCTTTCTCAATGTACGTTCTCCAGCTCTCTTTTATATCTAATTTTCGCTTGAAATCACTATAAAAGCTGTTGGATGCTATACGAAAGTAAAAATTGCTTCTCTATGCAGTTGAATTCCTTTTGCATGATGTTTGGATATATTTTGAAGATAAATTGCAATGACCCGGCTTCTTAAACAATTGTCTAGGGTTGTTACTTCATGCATGCTAAAGTAAAAGATCCAAAAACTTTGAAAAACCATTACTAATAGGATTGATAGATAAGATAGCTTTATTTACTAAGAATCTTGAGTTTTCTTTTTGGAGATCCCATTGAAAACACATAAATAACCACTTAAAAACATCTTAAGAGGAAGTAAATTAATTTTTAAAAAGGATCTACAACATGATTACACCAAGGCTTGCTATTAAAGGTGACATAATGTGGAAATTTATGCTAACACGGACTTGATGGCTCAATCAATATACGACCCATCACTTGCCTCATACGTCCTTGTCGGTAACTGAAACAAAAAGTGTTGGAAAAGGTTAAATATTAAAAGTACTCCATAAGTAATCCCTCCAATGGAGTTGCATGCACACAACATGAACATGCAACATGCACCTATAGGAGCGAGATTATTACTGCCCGAACATGTCATTTTCTATGGCGATTGTGGATCAATATTTTGTCTAAGATAATCTCGGTTTCTGTCTGGAAGATTCTATGTTTTTGTGTACGGTTCTAAAATTATACGTGTAGTTTGACTACTCTCAGTTTGTCTGAAGGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAAATGGTTCTGCGACTAGTTGAAGCTATCGGTAGGATCCTCGGATACTCCCTACTATATCTCTTATTTATGCTGGAAGTATAGAGCTGATAACAGCATTTAAAAGCATGACTTTTTGCTTTCCCTCTTGTTTTAATTTTCATTGTCACTGTCACTTGCAAAAAATGAACCCACAGGCCATAAATACTGTGAATCTTTTCTCTCGTTCATAAACAATCATGAATTATTACCCCATGCAGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGTAAATTAAAGACATTATTTTTAAGAAAATCAAGAATATCCTTCAAGAAATCAAGAATGTTTGCCTTGAAGGTAATTTTGGTGGTTGTTGGTTGCAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAGGTCGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAGGAATGCAAAGTCAAGATATGCCAGGGAAGAGCATATTATTGCCTTCATAAATCCCCTAAATGAAATTTACCATATGAGCCATATATATTTGTTTGGTTTTGGTTGCTCTTCTTTCCTGTAATGTCTGTTTAAGTGCTGAATTCATTGTTTTCTGTCAAAAAATTTCTAGTAGCAGAAAATATTGCAGTTTCCTTTAGGGATAAGTGCAGTGTGTATATTGTAGTAAAATGCTAATGTGTATATATTTTCAGAGGTATAAACAAGACTGCTTATTATACTCATGATTTAATCATTTGTTAAGTGAACTCCTTGTTGACAGCTAAACAGAAG

mRNA sequence

CAGCTGCAAATCCAACCCCAAGACTCAGAAAGGGGTTCACCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCAGAAAAGGTTTGAAACTGATATCCAACAGGAATCTTTCCTGTCAAGTTATTGTTCGAGAGATTCAAATCACTCAACCATATTAATTTAGTCAAGCTAGGAGGAATGGGACCTGAGAACCTGTTGTTTGAGAGATCAAGATATGATAATTCTATCAGGTTTGAAATGTTCTCTGGAATCTGGCCACTGATATGATTTTGAGACAAGTTCAAGGCAATAAGCCCGGCTAACTCAGTTATATCTTGAGGTAAAACTCCATACAGTTCGTTCCCAGAGAGATCAATGCTTATTACAAGGGAAAGGGTCTTAGTGTACCTCAATAAGTTGCCTTTTGTGTTCAAGATGTAGTTTTCTTCGTAGTAAATGCTCCTGTATTTCCCGTAAAGTAGATATTGGTTTGTTGTCTGGCGTTGAAACATAGCTTTGAGACTGCTGAAACCAATTGAAATGGAACCATTCAACTTGTTTTGTGCCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGCTCCGGAAAATGCATTTGACCTCAAGGTGAGGATTCTCAGATTTGGAAAACTAGTTCCAATCCAAGGAGGAATACTACCGACAAGACCATTATTCCCAAGATTCAGTGTTTCCAGATTGGAGAGATTTTGGAAAGATGGTGGGAGCTTTCCAGTGAGCCTGTTTTCACTTAAATGTAGAGTCTGAAGCTGATTTAACTGACCCAAAGAGTCTGGAATTGGACCTACTAAATAGTTGTTCGCGAGGTCGATTGCCTTCAACAACGAACAATTCCCAATAGTTGAAGGAATTTTACCAGTCAAGTTATTCCCTGATAGATTAATGACCTGAAGAATCTGCATTTCCCCTACAGTATCTGGAATTTCACCTGTTATTTGATTATTAGCCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATTGAACCCGAGAATATGTTATTTGAAAGTTCGAGTGAAACAATCTCAAAGCTTGGAAGAGGAATCGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTATTTTCAGCGGGTTCGGTAGTCGTCCCTCTAACCGGTTGTAAGAAACGTTTAAAAGAGCTAGATTTGCTGAGATTTTCCAAAACCAGTTGGGAATGGGACCTGAGATGCTGGCATTTGAGAAATCCATGAACAGCACCGCATTTTGTGATTTGAGCCAAACTGGAAATGGAGAACCCAAGTAACACGAACCCATGTCAAGATTTCTGACTTGGAATGGAGGAACCCAATTGGAACTAACATTCAATCTCAAAGAATTCGAAGATAAATGTAAGATTTTCAGTTTGTTTAGCTTTGAAAAATGTGCTTCTGAGACTGTCCCTGTGAATTGATTGCTAGAAACATCTAAAAGAGACAGCTCAGAAAGCTGCCCTATACTCTCAGGGAGAGTCCCATTCAGCTTATTTCCTTGCAGCCCCAATGAAGACAACTTTTCAAGTGATCTGAAATCAACAATGGGACCTTGAAATCTAGATGCTCCAGGCTAAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGGTAACGTCCCGTTCAAATTATTACCCGATAATCGGAAAAAGTTCAGGTTGCAAAGCCTTCCGATGGTGCTCGGAATCCCTCCTTCGACGTTATTCCCTAAAAGATCAAAATAAGCAAGAGAACTCACATTTCCAATGGAGGATGGAAGCTTTCCATGAATCTTATTCTCAGCTAGTATAAGAACTTCCACCCTACTCCATCCTCTTTGAAATAACTGAGAGCAGCTCGCTGAGAGATTTCCATTCCCAGAAAGATCCAACGAGCGTAAACTGGGTAGATCACCGAGGCCGAGGGGAATTCTACCGTACAAATTACAATCACTCATACTGAGTGATGTCAGGCTACTAACATTCATAAGCCAAGTGGGTATCTGAGAATTGATATTGTTTCCAGTTAAATCAACAACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCTCCAGATAAGCCACAATCACTCATATGCAACTCAGTTAAGAATTTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGGGGAAAGATCCATGCTATCCATTGCAAGATACTTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTGGGAGGCAGTAAACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCGAAGAATTCAGGAACTGGAATATCATTGAATGTGTTAAAACTCAAATCCAAATATCTCAAAGACCTTAGTTTTGTGAGCGATGGACTTATCTCTCCACTAAGATTCCAGAATCCTTGCTCCCCTAAGGGATGTGGGTTATGAAGATCAATCACAGTAACAGCTCCAGTTCCATTGTTACACCCCACCCCTCTCCATTGGCAACAGTCCATCCCTTTCCATGACACGAGTCGATTCTCAGGATCGTTGAGGCCACTTTTTAAGGCAATCAAAGCTTCTCGATCGGAATCAAAACACCCTAGAGACTTTACATGAACATTACAGAAAAGAACTAGAATAGCTAATTGAAGAACTGGGCTCGTCGACATTGACACAACTTTCTCTCTGTTGCGAGGCCGAAGGAGATATTGAACGTGCTTCCCCACACGTATTTCGCGGTAAAACCAGTTGGCTCTAAAATCAGACATAAACGTCGATTTCAAGTGCGAAGATGTGAATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGTTTTCCGCGATCTCCCCGCTGCCATTAGCCGTCTCCTTAGGGTTCCACCGCCTTCATTGTCCAACCACGGTGGGTCGTCGCTTTTCCTACCCTTGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCTAAATCAGCGAAAGCATCATCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTCGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGTTTCATCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCCGGTTCACTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAAATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAGGTCGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAGGAATGCAAAGTCAAGATATGCCAGGGAAGAGCATATTATTGCCTTCATAAATCCCCTAAATGAAATTTACCATATGAGCCATATATATTTGTTTGGTTTTGGTTGCTCTTCTTTCCTGTAATGTCTGTTTAAGTGCTGAATTCATTGTTTTCTGTCAAAAAATTTCTAGTAGCAGAAAATATTGCAGTTTCCTTTAGGGATAAGTGCAGTGTGTATATTGTAGTAAAATGCTAATGTGTATATATTTTCAGAGGTATAAACAAGACTGCTTATTATACTCATGATTTAATCATTTGTTAAGTGAACTCCTTGTTGACAGCTAAACAGAAG

Coding sequence (CDS)

ATGGCGTTTTCCGCGATCTCCCCGCTGCCATTAGCCGTCTCCTTAGGGTTCCACCGCCTTCATTGTCCAACCACGGTGGGTCGTCGCTTTTCCTACCCTTGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCTAAATCAGCGAAAGCATCATCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTCGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCGTTTCATCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCCGGTTCACTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAAATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAGGTCGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAG

Protein sequence

MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

Homology

[Close]

BLAST of Cp4.1LG02g15590 vs. NCBI nr
Match: XP_023524970.1 (uncharacterized protein LOC111788737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546 bits (1407), Expect = 1.88e-195
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288

[Close]

BLAST of Cp4.1LG02g15590 vs. NCBI nr
Match: KAG6606889.1 (hypothetical protein SDJN03_00231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539 bits (1389), Expect = 1.08e-192
Identity = 287/289 (99.31%), Postives = 287/289 (99.31%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGG-GGGGGGGAFHPIIRFMGSAESSIERVIFDFRF 120
           GTSTPLVEPSRAADSNFSYAYANPSGG GGGGGGGAFHPIIRFMGSAESSIERVIFDFRF
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPSGGSGGGGGGGAFHPIIRFMGSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]

BLAST of Cp4.1LG02g15590 vs. NCBI nr
Match: XP_022998473.1 (uncharacterized protein LOC111493097 [Cucurbita maxima])

HSP 1 Score: 528 bits (1361), Expect = 1.60e-188
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTSTPLVEPSRAADSNF YAYANPSGGGG     AFHPIIRFMGSAESSIERVIFDFRFL
Sbjct: 61  GTSTPLVEPSRAADSNFGYAYANPSGGGG-----AFHPIIRFMGSAESSIERVIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 283

[Close]

BLAST of Cp4.1LG02g15590 vs. NCBI nr
Match: XP_022948969.1 (uncharacterized protein LOC111452456 [Cucurbita moschata])

HSP 1 Score: 521 bits (1342), Expect = 3.78e-185
Identity = 280/288 (97.22%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTSTPLVEPSRAADSNFSYAYANPSGGGG     AF PIIRFMGSAESSIERVIFDFRFL
Sbjct: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGG-----AFLPIIRFMGSAESSIERVIFDFRFL 150

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 151 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 210

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 211 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 270

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 271 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 313

[Close]

BLAST of Cp4.1LG02g15590 vs. NCBI nr
Match: KAG7036594.1 (hypothetical protein SDJN02_00213 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482 bits (1241), Expect = 7.38e-170
Identity = 264/314 (84.08%), Postives = 270/314 (85.99%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMG---------------- 120
           GTSTPLVEPSRAADSNFSYAYANPSGG           ++RF+                 
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPSGG-------VVVVVVRFIRLLGLWDPLNPQLRGLI 120

Query: 121 ----------SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSC 180
                          +++VIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSC
Sbjct: 121 FQFFNGFMTVPVSPDVKQVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSC 180

Query: 181 VKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFG 240
           VKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFG
Sbjct: 181 VKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFG 240

Query: 241 MFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLS 288
           MFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLS
Sbjct: 241 MFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLS 300

[Close]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL
Match: A0A6J1KGV4 (uncharacterized protein LOC111493097 OS=Cucurbita maxima OX=3661 GN=LOC111493097 PE=4 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 7.75e-189
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTSTPLVEPSRAADSNF YAYANPSGGGG     AFHPIIRFMGSAESSIERVIFDFRFL
Sbjct: 61  GTSTPLVEPSRAADSNFGYAYANPSGGGG-----AFHPIIRFMGSAESSIERVIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 283

[Close]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL
Match: A0A6J1GBH2 (uncharacterized protein LOC111452456 OS=Cucurbita moschata OX=3662 GN=LOC111452456 PE=4 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 1.83e-185
Identity = 280/288 (97.22%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTSTPLVEPSRAADSNFSYAYANPSGGGG     AF PIIRFMGSAESSIERVIFDFRFL
Sbjct: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGG-----AFLPIIRFMGSAESSIERVIFDFRFL 150

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 151 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 210

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 211 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 270

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 271 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 313

[Close]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL
Match: A0A6J1F6Z4 (uncharacterized protein LOC111441432 OS=Cucurbita moschata OX=3662 GN=LOC111441432 PE=4 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 4.16e-164
Identity = 255/288 (88.54%), Postives = 258/288 (89.58%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MAFSAISPLPL VS GFHR   PTT   RFSY  ASLSSSSSESKSAK SSP+     SN
Sbjct: 1   MAFSAISPLPLTVSFGFHRPQRPTTAAPRFSYSFASLSSSSSESKSAKPSSPTHN---SN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTS P VEPSRAADSNFSYA+ANPS GGG     A HPI+ FM S ESSIERVIFDFRFL
Sbjct: 61  GTSAPFVEPSRAADSNFSYAFANPSAGGG-----ALHPILGFMQSTESSIERVIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDE PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 280

[Close]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL
Match: A0A6J1DH02 (uncharacterized protein LOC111020358 OS=Momordica charantia OX=3673 GN=LOC111020358 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 8.93e-164
Identity = 255/288 (88.54%), Postives = 259/288 (89.93%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA SAIS  P AVSLGFHR      VGRR  YPCASLSSSSSESKSAKASSP+D V SSN
Sbjct: 1   MALSAISTAPFAVSLGFHR-----PVGRRLPYPCASLSSSSSESKSAKASSPTDNVVSSN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTS PLVEPSRAADSNF+YA+ANPSGGGG     AFH I+ FM S ESSIER IFDFRFL
Sbjct: 61  GTSAPLVEPSRAADSNFNYAFANPSGGGG-----AFHSILGFMQSTESSIERAIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDAPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 278

[Close]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL
Match: A0A6J1J0L4 (uncharacterized protein LOC111482385 OS=Cucurbita maxima OX=3661 GN=LOC111482385 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 1.30e-161
Identity = 252/288 (87.50%), Postives = 255/288 (88.54%), Query Frame = 0


Query: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60
           MA S ISPLPLAVS GFHR   PT    RF Y  ASLSSSSSESKSAK SSP+     SN
Sbjct: 1   MALSVISPLPLAVSFGFHRPQRPTAAAPRFFYSFASLSSSSSESKSAKPSSPTHN---SN 60

Query: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120
           GTS P VEPSRAADSNFSYA+ANPS GGG     A HPI+ FM S ESSIERVIFDFRFL
Sbjct: 61  GTSAPFVEPSRAADSNFSYAFANPSAGGG-----ALHPILGFMQSTESSIERVIFDFRFL 120

Query: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180
           ALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240
           LIFGMGLYGLFISNVSPDE PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 280

[Close]

BLAST of Cp4.1LG02g15590 vs. TAIR 10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 321.2 bits (822), Expect = 8.3e-88
Identity = 194/286 (67.83%), Postives = 216/286 (75.52%), Query Frame = 0


Query: 4   SAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSNGTS 63
           S IS  PL++S+  + L  PT   RRF  P A+L SS  ES SA +S P+      NG +
Sbjct: 5   SLISATPLSLSVPRY-LVLPTR--RRFHLPLATLDSSPPES-SASSSIPTS--IPVNGNT 64

Query: 64  TPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFLALL 123
            P    +R  DS                      P  +F  S ES++ER+IFDFRFLALL
Sbjct: 65  LPSSYGTRKDDS----------------------PFAQFFRSTESNVERIIFDFRFLALL 124

Query: 124 AVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 183
           AVGGSLAGSLLCFLNGCVYI +AYKVYW++C KGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 125 AVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIF 184

Query: 184 GMGLYGLFISNVSPDELPP-VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIV 243
            MGLYGLFIS+ SP ++PP  DRAL+ SSLFGMFA+KERPKWMKISSLDELKTKVGHVIV
Sbjct: 185 SMGLYGLFISH-SPHDVPPESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIV 244

Query: 244 MILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289
           MILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 245 MILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHKGE 261

[Close]

BLAST of Cp4.1LG02g15590 vs. TAIR 10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-42
Identity = 103/240 (42.92%), Postives = 144/240 (60.00%), Query Frame = 0


Query: 56  VSSSNGTSTPLVEPSRAADSNFSYAYANP----------SGGGGGGGGGAFHPIIRFMGS 115
           +SS  G   P         S++S++Y +P          S           +   RF  +
Sbjct: 38  ISSFRGLKLPSRTTKTITSSDWSWSYRSPGRLASASTSTSASTSTSAAVTSNSTNRF-EA 97

Query: 116 AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVL 175
            E  IE+VI+  RF+  L   GSL GS+LCF+ GC+Y+ D++  Y       ++ G+++ 
Sbjct: 98  LEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKVIF 157

Query: 176 RLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWM 235
            LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+W+
Sbjct: 158 LLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWL 217

Query: 236 KISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH 286
           ++ S+ ELKTK+GHVIVM+LL+ +F++SK V I +  DLL  SV IF SSA L++L  L+
Sbjct: 218 EVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRLN 270

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g15590 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g15590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524970.1	1.88e-195	100.00	uncharacterized protein LOC111788737 [Cucurbita pepo subsp. pepo]	[more]
KAG6606889.1	1.08e-192	99.31	hypothetical protein SDJN03_00231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022998473.1	1.60e-188	97.57	uncharacterized protein LOC111493097 [Cucurbita maxima]	[more]
XP_022948969.1	3.78e-185	97.22	uncharacterized protein LOC111452456 [Cucurbita moschata]	[more]
KAG7036594.1	7.38e-170	84.08	hypothetical protein SDJN02_00213 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG02g15590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGV4	7.75e-189	97.57	uncharacterized protein LOC111493097 OS=Cucurbita maxima OX=3661 GN=LOC111493097...	[more]
A0A6J1GBH2	1.83e-185	97.22	uncharacterized protein LOC111452456 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1F6Z4	4.16e-164	88.54	uncharacterized protein LOC111441432 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A6J1DH02	8.93e-164	88.54	uncharacterized protein LOC111020358 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1J0L4	1.30e-161	87.50	uncharacterized protein LOC111482385 OS=Cucurbita maxima OX=3661 GN=LOC111482385...	[more]

BLAST of Cp4.1LG02g15590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13720.1	8.3e-88	67.83	Uncharacterised protein family (UPF0114)	[more]
AT4G19390.1	2.4e-42	42.92	Uncharacterised protein family (UPF0114)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016804	Uncharacterised protein family UPF0114, plant	PIRSF	PIRSF022348	UCP022348	coord: 1..288 e-value: 6.7E-114 score: 377.8
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 114..252 e-value: 3.1E-36 score: 124.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..67
None	No IPR available	PANTHER	PTHR31721	OS06G0710300 PROTEIN	coord: 24..288
None	No IPR available	PANTHER	PTHR31721:SF1	OS07G0656700 PROTEIN	coord: 24..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g15590.1	Cp4.1LG02g15590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane