Cp4.1LG02g15160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g15160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Serrate RNA effector molecule-like protein
Location	Cp4.1LG02: 13590632 .. 13596521 (-)
RNA-Seq Expression	Cp4.1LG02g15160
Synteny	Cp4.1LG02g15160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCCCTACGCGCCATCTCGTCCAAGGGCCAATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTGTTTGATCAGTTCTACATTTCCAGTAGCTTATGGTTCTTCAAGTTCTTTTGGGGCATCTTATCAAGTTGTTGTGTTCACATCTGTAAAATGGGATTGAATTAAGTTGGTCGTGTTGTATGTTTGTGTTTATGTTTCCATGAGTAGAGAGATTGATATTCAATAGCAATGCATTGTATTTTTTGTTTGTAAGTCAAATAACATATCAGTATAAGATACTGATGGTTTGTGCATTTAGAATTGAAGTGTGTTCAAAATTCATATATCTGTCTGATGATTCTCTTCTTGCCATAACATCTTCCTTTCATGCTCAGGATTGATTTCATCATTTCATAATTTAACATTATTTTCTTCCTTTGCTCTGTCTTTCATCTTCTGGTTTATCTTCTCTGTAANGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTGTTTGATCAGTTCTACATTTCCAGTAGCTTATGGTTCTTCAAGTTCTTTTGGGGCATCTTATCAAGTTGTTGTGTTCACATCTGTAAAATGGGATTGAATTAAGTTGGTCGTGTTGTATGTTTGTGTTTATGTTTCCATGAGTAGAGAGATTGATATTCAATAGCAATGCATTGTATTTTTTGTTTGTAAGTCAAATAACATATCAGTATAAGATACTGATGGTTTGTGCATTTAGAATTGAAGTGTGTTCAAAATTCATATATCTGTCTGATGATTCTCTTCTTGCCATAACATCTTCCTTTCATGCTCAGGATTGATTTCATCATTTCATAATTTAACATTATTTTCTTCCTTTGCTCTGTCTTTCATCTTCTGGTTTATCTTCTCTGTAATCTAAGATTATCATGAAATTAGTAAAACTTGGTTCTATTGTCTGTTTTTTTTAACCATTTGAAAAACTATCTTACCAAATAAGTTCTCCGATTCAGAATGTTCAAATTCATTTTTAAAAATAGACTATAGTTTTCAAATATAGCTTTGGGACAATCTTTAAACCATAAGTTTTCATGATTAGTAATTATTTTATTAGATATCAGTGTAAGAGATGAAATGACCGCATCATCATTTTGTCTCTTAATCAAGATTAGCAGTATATATGTTCATGTTTGGCATCATAAACTTAGTAATGTAGAAGTTTTAACTTTTTGAGACTCTGTTAAATTATGAATTATGAGAACTAGTAATTGTCTAAAAAACAAAAGTTATGGTACCCAGTGATTTCAAGAGTGACTTGGTGTTGGAAAATGAATTCATCTCTGAACAGCATTTTGCTACACCTAGTAAATAAATATGAGAATGTGGAAGTTTGGAAGTCAAAAGTTCACAGTTTAAAGACTAAGCATAATAGATAACAATGTTCAAACCCAAGGGAATTTGGATATTTGAGTTTTCCTTTTGGTTCTTTGATTTGGTCACTTAACAATGTTTTTCTGTGATTTTCAGTTATTCAATGGTTTACTTAACCAAAGCCACCATATCAGGACGTGGAGCTGAAAAAGAAGGAATTCATGAAAAGATTCTGTAACTTCAGGAGGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAAAAGGGTCAAGAAGTGGATAAAACCAAACATGGGGAAAATACTAATCCAAGCAACATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATAACGAAAAGATGCTAAGCATGAAAACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGAAGGAAATGCCTCTATTGCTGCAATATCCTACGCATAGTACTTTTCCCCTTTGATGAAGCTAGAGAAAAGCAAGAATCCAATGGTTCCAGGTTATGTTTAATAATTATATTGCTCGAGCCAGTAGCCTCTATCATTACCAATGTAATGGTTAATAGGTAAAGGATTGATGCCCATTTTGTTTATGATCCATTCCTGTTTGTGTCTGTTTGTGTCATGCATTTTTCAGAATTTTGAACATAATAAAAGTGATAATAACTGTTCCAAGATTACTTACATGTGCATATTTTCTCTCTCCTCTCCCCATAAATCAACTACTTGTTAGTACTGAATTCATGAAGTCATTGTCAGTGATTGTCTTCCTGCTCGTCATTCTGTGTTGCAGACCCGAAGGTCAGAACAAATCCAACCCCACCTTGTCCCAGGCCTTCTTACTGTAGCTTTAGCTTGAATTCAACTTTGTACAGTAAATTTATGATATTCAAACAATTTGTTGGACCAAACAGGTGGCTTGTTTTTGGATTTGACCCTCTGACACATTAAAGCATTAACTTATTTTGTAGGTAGATTACTTGAGAAAAGGTTTGTTTTTGGATTAAACCTTCTTTAGTGATGACCAGTTATCCTTAGAGGAAGACACTAATTGGATTAAACTTCACCTGATGCTATGTGATCATAAATCCACAATTCTTTTTTAGTCCATTCTCTGTCTACTTTTGCTGTGTATCTGAAGAAAATAATTGTTCTTTGTTTCAGTAAATTTTAAGCACAGTACTTNGGCTCAGCGTCTTCGCTGACACTTGTTCCTTTCTCCAATCGATATGAGACTCTTCAATCCACCCCCTTCAGGGCCCAGCGTTTTTGCTGGCACACCGCCTCGTGTTCATTCCCTTCGGGGCTTAGCCTCCTCGCTGGCACATAATCCGATGTCTGGCTCTAATACCATTTGTAACTACTCAAGCCAACCGCTAGCAAATATTATCCTCTTTGGACTTTTCCTTCCGAACTTCCCTTCAAGGTTTTAGAACGCGTCTACTAAAGAGAGGTTTTTACATCCTTATAAAANTTGATTTGATGAAACTTGATTCATTACTCAACCTCTGATAAATTACTCATTGCTTTAGTTGAGATGCAAAATCAAAGGCTATGATTCTTCAATGTTGCAAAGAATGGACACCCCAACTGATGAAGTAACAAAGCAACAAATGGCCAACACCCAAAGCTTGCTCGGTCATTTTCAGGAAGGTTTGTATGGTATGATAAACAAGTAAGAGATTTAATTGTCATTAAGTGTGTTAATACCCAGATTTCTGTTACTTTTACATCTTGCTTGATATTGATACTAGGAGAGAAATTAGTTCCTTTATTATGACTAATGATCAGAGTTTAGATGAATGATTAAGGTGAACATGATTTGTTTTGGGATATGAACTGAACCCCACCACTGGTTTGGCCTTATTAGGAGATCCTGTAGGTCAGAAATCAAGCCAATGAAGATTTACCCACAATTTAATAATGTGTGAAAAATGATGATTGTGATGGAATAGGTGAGGAGGGAGGGGGAGGGCCATTATGTGGCTTCCATTGCTTTTTCACAAGGTGTGCTCTATCTATACCTACCTCTTTTTGATGTTCTAATGTGATGGTCTATTACTTTCAACTGCAATTGGGTCAAGAATGTTGTCATCACACCCATTCTATCTAATCTATCTGCGTATATATTCATGTCTCATTAAATGAAAACTACAAGCATCCAAATTTGTGCTCATTTCATGGACCACACAGCACACCACTATTTACTCTTTGAATTTCATATTGAAATCCTCTCTCTCCCTCACAAACATGTTTGATTGACAAGAAGCCTAAATTATAATGTTATGTTGGATCTTGAATTATGACACCAACTCCTCGTTTGTGTGTGAATTTTTTTTTAATCTTATTTTTAAGGTTGTATTTGATAGGTATTTTGTTGTTTTGTTCTATTGTACTATGCAATTATTTGATCTATACAATTATTCTCAAAACTAGATCGTAACGTGTAGGGAAGCTCATCAAATAGAATAAACCAGTTTAGTTATTCTTAAAACTAGGTTGTAACGTAAAGTACGTGTAATTATATACCTAAGCCCATGGCTAGCCGATATTGTCTTCTTTGGGCTTTCCCCTCAAGGTTTTAAAATGCATCTACTAGAGAGAGGTTTTCACACCCTTATAAAATGGTGTTTCGTTCTTCTCTCCAACTAATGTTGGATCTCGCAATTCACCCCCTTTCGGGGCTCAGCGTCTTCGCTGACACTTGTTCCTTTCTCCAATCGATATGAGACTCTTCAATCCACCCCCTTCAGGGCCCAGCGTTTTTGCTGGCACACCGCCTCGTGTTCATTCCCTTCGGGGCTTAGCCTCCTCGCTGGCACATAATCCGATGTCTGGCTCTAATACCATTTGTAACTACTCAAGCCAACCGCTAGCAAATATTATCCTCTTTGGACTTTTCCTTCCGAACTTCCCTTCAAGGTTTTAGAACGCGTCTACTAAAGAGAGGTTTTTACATCCTTATAAAAGAGTGTTCCGTTCTCCTCGGTAGAACGCGTCTACTAAAGAGAGGTTTTTACATCCTTATAAAAGAGTGTTCCGTTCTCCTCCCCTACCGATGTGGACAGTACGAATAATGAAAGACATTGAAATTCAACTTAAGAGATGGTTAAGCTTTCAAAATTGGAACTTTTTCATCGCCCACATTTCTCTTAGTGTATGCGTGTGGATCCATCTTAATTATAATGTCCATAAAAGCATGAATGAGAAATTTCCTCCAACACCTATACTTCAAGTCTAGCAACTTGTACTAGTGGGAACTTGCTGCATCGCTATCTATCACTACCTTTTTTAGAGAGAGAAAAAGAAGGAAAGAGAGACTAGGGCATTACTTTCTCAAATTCCAAAGTAATTTGAACAGAAACAATGGTTTTTTTAGAATTTTCTTTTGAGAATTGCCCGTTCAAGAGGTCTACTTTTTTGTTCTTCTTCTGTTGCCAAAATGGATTATTTACAGAGAATCTTCTCAAGTATTGGAAGCAGAAAGGGAAAGGAAGAAAGAAAACAAATAAGGATCTAAATCAATTCCCATCTTAGAACAAACCATCTAATTGAAAATTTTGAAAAAAAAAAAAAAAGAAATTTGAAGAAAGTTCCCTTTCTGATTAGAGCTTAAGAGACAAGTCAAGCTTCAATAACTCATCTTGTTTAGCCTTCATCTTCAAGTGACTGAAACCGCCACCACCGCCGCTGCCACTGCCGCTGCTATCCCACCAGAACCCTTCGAGCGGCGGCGGCGTTTCCGTCGTAGAGAATTTTTTCACACCGTCAAACCTTGCAGCTCCTGTGTTTGACGTAATGCATCTAAGACTTCCGATGTGGGAACTCCCCTGCGGCAGCCTCCCAATCGCCGGTTGTTGATCAAGCGGCTGCCGTGACCACCCACTGTGACCATAAATTCCCGACGACCCAATTCCAGAAACATGAAAAGAAGAAGGCTTATGAACCATGGAATGAGCCTGAATTCCAAGCGACCTAC

mRNA sequence

TTTCCCCTACGCGCCATCTCGTCCAAGGGCCAATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTCTTATGGTTCTTCAAGTTCTTTTGGGGCATCTTATCAATCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTGAGGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAAAAGGGTCAAGAAGTGGATAAAACCAAACATGGGGAAAATACTAATCCAAGCAACATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTTGTATTTGATAGTGACTGAAACCGCCACCACCGCCGCTGCCACTGCCGCTGCTATCCCACCAGAACCCTTCGAGCGGCGGCGGCGTTTCCGTCACTTCCGATGTGGGAACTCCCCTGCGGCAGCCTCCCAATCGCCGGTTGTTGATCAAGCGGCTGCCGTGACCACCCACTGTGACCATAAATTCCCGACGACCCAATTCCAGAAACATGAAAAGAAGAAGGCTTATGAACCATGGAATGAGCCTGAATTCCAAGCGACCTAC

Coding sequence (CDS)

ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTCTTATGGTTCTTCAAGTTCTTTTGGGGCATCTTATCAATCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATTAATGGCGACAGCACGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCAAAGGAAAAGAAATTTGGGTATCCATTTCTCTTCTCTATCTTCCTCTTCCTTGGCTGAGGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAATCAGGGAGTGATAGTATAAAAAAGAACTCTGAAAAGGGTCAAGAAGTGGATAAAACCAAACATGGGGAAAATACTAATCCAAGCAACATGGGGAATGCGCCAGAGTTGAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTTGTATTTGATAGTGACTGAAACCGCCACCACCGCCGCTGCCACTGCCGCTGCTATCCCACCAGAACCCTTCGAGCGGCGGCGGCGTTTCCGTCACTTCCGATGTGGGAACTCCCCTGCGGCAGCCTCCCAATCGCCGGTTGTTGATCAAGCGGCTGCCGTGACCACCCACTGTGACCATAAATTCCCGACGACCCAATTCCAGAAACATGAAAAGAAGAAGGCTTATGAACCATGGAATGAGCCTGAATTCCAAGCGACCTAC

Protein sequence

MIRARASWSRFSNRSFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSSSLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANELYLIVTETATTAAATAAAIPPEPFERRRRFRHFRCGNSPAAASQSPVVDQAAAVTTHCDHKFPTTQFQKHEKKKAYEPWNEPEFQATY

Homology

[Close]

BLAST of Cp4.1LG02g15160 vs. NCBI nr
Match: XP_038901255.1 (uncharacterized protein LOC120088201 [Benincasa hispida])

HSP 1 Score: 155 bits (393), Expect = 1.39e-41
Identity = 115/268 (42.91%), Postives = 143/268 (53.36%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M+RARASW+RFS R       SFCSK HI  +KNS   +INGD+ VESDL SYNEAYKQL
Sbjct: 1   MLRARASWNRFSKRLKPFETSSFCSKSHIQINKNS---KINGDNKVESDLSSYNEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L      K+  GI F  +      +  L V L     R+  R   +   
Sbjct: 61  DNLDFMTASKILFTKPSNKKKFGIDFHLVQLFFACMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
           +   K         +   + +L    E +++                           + 
Sbjct: 121 LKKKKEEE------EKAKQLELEETEEIHEK---------------------------NQ 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVK RLDKLEETIKEIA+E RKQSG+  I KNSEKGQ+VDKTKHG N +P       
Sbjct: 181 ELQEVKIRLDKLEETIKEIAVEPRKQSGTGIITKNSEKGQDVDKTKHGANIDP------- 223

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRANE 257
             SKSM+  L G+KIV APV PKGRA+E
Sbjct: 241 --SKSMDDPLGGQKIVPAPVLPKGRASE 223

[Close]

BLAST of Cp4.1LG02g15160 vs. NCBI nr
Match: XP_022956225.1 (uncharacterized protein LOC111457985 [Cucurbita moschata] >XP_022956226.1 uncharacterized protein LOC111457985 [Cucurbita moschata])

HSP 1 Score: 152 bits (384), Expect = 2.99e-40
Identity = 119/267 (44.57%), Postives = 144/267 (53.93%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARAS SRFS R        FCSK  I T+KNSNN  ING + VESDL SY EAYKQL
Sbjct: 1   MFRARASLSRFSKRLKPFQTSPFCSKSRIGTNKNSNNGEINGSNKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L     +K+  GI F  +    + +  L V L     R+  R       
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKM----- 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
                         ++ +E   +   EA KQ+           L+ +    IH  +    
Sbjct: 121 --------------EADLELKKKKEEEAAKQIK----------LEEREE--IHDKN---Q 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK Q VDKTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTKNSEKAQGVDKTKHGANIDP------- 224

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRAN 256
             SKSM+ HL G+KIV APV PK RA+
Sbjct: 241 --SKSMDDHLGGQKIVPAPVLPKIRAS 224

[Close]

BLAST of Cp4.1LG02g15160 vs. NCBI nr
Match: XP_004152172.1 (uncharacterized protein LOC101207869 [Cucumis sativus] >KGN52943.1 hypothetical protein Csa_015113 [Cucumis sativus])

HSP 1 Score: 152 bits (384), Expect = 3.24e-40
Identity = 111/268 (41.42%), Postives = 145/268 (54.10%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARASWS FS R       SFCSK HI T+K+SNN +INGD+ VE DL SYNEAYKQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKSHIQTNKSSNNGKINGDNKVEPDLSSYNEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+ M +S  L     +K+  G+ F  +    + +  L V L     R+  R   +   
Sbjct: 61  DNLDLMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
           +   K         +   + +L    E  ++++ +N                        
Sbjct: 121 LKKKKEEE------EKAKQIEL----EETEKIHEMN-----------------------P 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLE TIKEIA+ESRKQSG+ +I KNSEKG++  KTKHG N          
Sbjct: 181 ELQEVKTRLDKLENTIKEIAVESRKQSGTGNITKNSEKGEDAVKTKHGVNI--------- 226

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRANE 257
           + +KSM+ HL G+KIV APV PKGR +E
Sbjct: 241 DSTKSMDDHLGGQKIVPAPVLPKGRVSE 226

[Close]

BLAST of Cp4.1LG02g15160 vs. NCBI nr
Match: KAG6581965.1 (hypothetical protein SDJN03_21967, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (380), Expect = 1.17e-39
Identity = 118/267 (44.19%), Postives = 143/267 (53.56%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARAS SR S R        FCSK  I T+KNSNN  ING + VESDL SY EAYKQL
Sbjct: 1   MFRARASLSRVSKRLKPFQTSPFCSKSRIGTNKNSNNGEINGRNKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L     +K+  GI F  +    + +  L V L     R+  R       
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKM----- 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
                         ++ +E   +   EA KQ+           L+ +    IH  +    
Sbjct: 121 --------------EADLELKKKKEEEAVKQIK----------LEEREE--IHDKN---Q 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK Q VDKTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTKNSEKAQGVDKTKHGANIDP------- 224

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRAN 256
             SKSM+ HL G+KIV APV PK RA+
Sbjct: 241 --SKSMDDHLGGQKIVPAPVLPKSRAS 224

[Close]

BLAST of Cp4.1LG02g15160 vs. NCBI nr
Match: XP_022980157.1 (uncharacterized protein LOC111479631 [Cucurbita maxima])

HSP 1 Score: 149 bits (377), Expect = 3.24e-39
Identity = 118/267 (44.19%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARAS SRFS R        FCSK  I T+KNSNN  ING + VESDL SY EAYKQL
Sbjct: 1   MFRARASLSRFSKRLKPFQTSPFCSKSPIGTNKNSNNGEINGINKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +   L     +K+  GI F  +    + +  L V L     R+  R       
Sbjct: 61  DNLDFMTACKILFTEPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKM----- 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
                         ++ +E   +   E  KQ+           LQ +    IH  +    
Sbjct: 121 --------------EADLELKKKKEEETAKQIK----------LQEREE--IHDKN---Q 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK Q VDKTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTKNSEKAQGVDKTKHGANIDP------- 224

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRAN 256
             SKSM+ HL G+KIV APV PK RA+
Sbjct: 241 --SKSMDDHLGGQKIVPAPVLPKSRAS 224

[Close]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL
Match: A0A6J1GVZ5 (uncharacterized protein LOC111457985 OS=Cucurbita moschata OX=3662 GN=LOC111457985 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.45e-40
Identity = 119/267 (44.57%), Postives = 144/267 (53.93%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARAS SRFS R        FCSK  I T+KNSNN  ING + VESDL SY EAYKQL
Sbjct: 1   MFRARASLSRFSKRLKPFQTSPFCSKSRIGTNKNSNNGEINGSNKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L     +K+  GI F  +    + +  L V L     R+  R       
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKM----- 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
                         ++ +E   +   EA KQ+           L+ +    IH  +    
Sbjct: 121 --------------EADLELKKKKEEEAAKQIK----------LEEREE--IHDKN---Q 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK Q VDKTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTKNSEKAQGVDKTKHGANIDP------- 224

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRAN 256
             SKSM+ HL G+KIV APV PK RA+
Sbjct: 241 --SKSMDDHLGGQKIVPAPVLPKIRAS 224

[Close]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL
Match: A0A0A0KTR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006500 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.57e-40
Identity = 111/268 (41.42%), Postives = 145/268 (54.10%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARASWS FS R       SFCSK HI T+K+SNN +INGD+ VE DL SYNEAYKQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKSHIQTNKSSNNGKINGDNKVEPDLSSYNEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+ M +S  L     +K+  G+ F  +    + +  L V L     R+  R   +   
Sbjct: 61  DNLDLMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
           +   K         +   + +L    E  ++++ +N                        
Sbjct: 121 LKKKKEEE------EKAKQIEL----EETEKIHEMN-----------------------P 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLE TIKEIA+ESRKQSG+ +I KNSEKG++  KTKHG N          
Sbjct: 181 ELQEVKTRLDKLENTIKEIAVESRKQSGTGNITKNSEKGEDAVKTKHGVNI--------- 226

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRANE 257
           + +KSM+ HL G+KIV APV PKGR +E
Sbjct: 241 DSTKSMDDHLGGQKIVPAPVLPKGRVSE 226

[Close]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL
Match: A0A6J1IQM5 (uncharacterized protein LOC111479631 OS=Cucurbita maxima OX=3661 GN=LOC111479631 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 1.57e-39
Identity = 118/267 (44.19%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARAS SRFS R        FCSK  I T+KNSNN  ING + VESDL SY EAYKQL
Sbjct: 1   MFRARASLSRFSKRLKPFQTSPFCSKSPIGTNKNSNNGEINGINKVESDLSSYKEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +   L     +K+  GI F  +    + +  L V L     R+  R       
Sbjct: 61  DNLDFMTACKILFTEPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKM----- 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
                         ++ +E   +   E  KQ+           LQ +    IH  +    
Sbjct: 121 --------------EADLELKKKKEEETAKQIK----------LQEREE--IHDKN---Q 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK Q VDKTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEETIKEIAVESRKQSGSGIVTKNSEKAQGVDKTKHGANIDP------- 224

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRAN 256
             SKSM+ HL G+KIV APV PK RA+
Sbjct: 241 --SKSMDDHLGGQKIVPAPVLPKSRAS 224

[Close]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL
Match: A0A1S3BZ75 (uncharacterized protein LOC103494654 OS=Cucumis melo OX=3656 GN=LOC103494654 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 2.39e-39
Identity = 110/268 (41.04%), Postives = 147/268 (54.85%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M RARASWS FS R       SFCSK HI T+K+SNN +INGD+ V+ DL SY+EAYKQL
Sbjct: 1   MFRARASWSSFSKRLKPLETRSFCSKPHIQTNKSSNNGKINGDNKVDPDLSSYHEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L     +K+  G+ F  +    + +  L V L     R+  R   +   
Sbjct: 61  DNLDFMTASKILFTQPSKKKKFGLDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
           +   K         +   + +L    E  ++++ +N                        
Sbjct: 121 LKKKKEEE------EKAKQIEL----EEAEKIHEMN-----------------------P 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVKTRLDKLE+TIKEIA+ESRKQSG+ +I KNSEKG++  KTKHG N +P       
Sbjct: 181 ELQEVKTRLDKLEKTIKEIAVESRKQSGTGNITKNSEKGEDAVKTKHGVNIDP------- 226

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRANE 257
             +KSM+ HL G+KIV APV PK  A+E
Sbjct: 241 --TKSMDDHLGGQKIVPAPVLPKDCASE 226

[Close]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL
Match: A0A6J1DGT5 (uncharacterized protein LOC111020934 OS=Momordica charantia OX=3673 GN=LOC111020934 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 1.68e-33
Identity = 110/268 (41.04%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 1   MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSTVESDLRSYNEAYKQL 60
           M  AR SW RFS R       SFCSK H PT+ N NN        VESDL SY EAYKQL
Sbjct: 1   MFGARVSWGRFSKRFKPFQTRSFCSKSHTPTNNNGNN-------KVESDLSSYGEAYKQL 60

Query: 61  NNLNFMISSLNL----QRKRNLGIHFSSLSSSSLALMVLQVLLGHLINRFSNRSFCSKFH 120
           +NL+FM +S  L     +K+  GI F  +    + +  L V L     R+  R   +   
Sbjct: 61  DNLDFMTASKILFTDPPKKKKFGIDFHLVQLFFVCMPSLAVYLVAQYARYEMRKMEADLE 120

Query: 121 IPTDKNSNNCRINGDSTVESDLRSYNEAYKQLNNLNFMISSLNLQRKRNLGIHFSSLSSS 180
           +   K         +   + +L    E                +Q K           + 
Sbjct: 121 LKRKKEEE------EKAKQMELEETEE----------------IQEK-----------NP 180

Query: 181 SLAEVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKGQEVDKTKHGENTNPSNMGNAP 240
            L EVK RLDKLEETIKEIA+ESRK SGS + K NSEK +E  K KHGEN    NMGNA 
Sbjct: 181 ELQEVKIRLDKLEETIKEIAVESRKPSGSGTXK-NSEKDREGGKVKHGEN----NMGNAS 223

Query: 241 ELSKSMNIHLSGEKIVAAPVFPKGRANE 257
           E SKS+  HL  +KI  APV PKGR +E
Sbjct: 241 ESSKSVEDHLGRQKIELAPVLPKGRESE 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g15160 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g15160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901255.1	1.39e-41	42.91	uncharacterized protein LOC120088201 [Benincasa hispida]	[more]
XP_022956225.1	2.99e-40	44.57	uncharacterized protein LOC111457985 [Cucurbita moschata] >XP_022956226.1 unchar...	[more]
XP_004152172.1	3.24e-40	41.42	uncharacterized protein LOC101207869 [Cucumis sativus] >KGN52943.1 hypothetical ...	[more]
KAG6581965.1	1.17e-39	44.19	hypothetical protein SDJN03_21967, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022980157.1	3.24e-39	44.19	uncharacterized protein LOC111479631 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVZ5	1.45e-40	44.57	uncharacterized protein LOC111457985 OS=Cucurbita moschata OX=3662 GN=LOC1114579...	[more]
A0A0A0KTR7	1.57e-40	41.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006500 PE=4 SV=1	[more]
A0A6J1IQM5	1.57e-39	44.19	uncharacterized protein LOC111479631 OS=Cucurbita maxima OX=3661 GN=LOC111479631...	[more]
A0A1S3BZ75	2.39e-39	41.04	uncharacterized protein LOC103494654 OS=Cucumis melo OX=3656 GN=LOC103494654 PE=...	[more]
A0A6J1DGT5	1.68e-33	41.04	uncharacterized protein LOC111020934 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Cp4.1LG02g15160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 171..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..231
None	No IPR available	PANTHER	PTHR36339	F23A5.5	coord: 1..60 coord: 167..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g15160.1	Cp4.1LG02g15160.1	mRNA