Homology
BLAST of Cp4.1LG02g14920 vs. ExPASy Swiss-Prot
Match:
Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)
HSP 1 Score: 511.9 bits (1317), Expect = 6.4e-144
Identity = 251/400 (62.75%), Postives = 313/400 (78.25%), Query Frame = 0
Query: 1 MVSLRPFRRFFH----AGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHL 60
M+SLR RRF H A T IA + T + N++Q KPLEEPAL+KLK+ERDPEKL++L
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60
Query: 61 FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61 FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120
Query: 121 KAEMIKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDI 180
KA M K A+DTF++M LYGC R+VKSFNA L+V+ DL + FL + P K+ I++D
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180
Query: 181 ISVNIVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNL 240
+S NI +K FC++GIL+ AY+ M EMEK G+ PDVVTYTTLISA YK +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240
Query: 241 MVLRGCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGF 300
MVL+GC PNL +FNVRIQ+LV+RRRAW+AN L+ +M + + PD ITYN+V+KGF A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300
Query: 301 LEMAKRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHS 360
+MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+L+YTMCKD M K W+PN+DT+
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360
Query: 361 VLTALKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTL 397
+L L K GQ +A+ I+ L +RVPPF + QL +L + L
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
BLAST of Cp4.1LG02g14920 vs. ExPASy Swiss-Prot
Match:
Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)
HSP 1 Score: 216.5 bits (550), Expect = 5.6e-55
Identity = 126/384 (32.81%), Postives = 206/384 (53.65%), Query Frame = 0
Query: 2 VSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLF-KAN 61
+SLR RRF A A T+A ++ SK A L+ E DP+K ++ +
Sbjct: 6 ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65
Query: 62 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
H+ + +R+A E TV RLA RRF IE L+E K P+ + E F +I YG+A M
Sbjct: 66 DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125
Query: 122 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFN-IELDIISV 181
HA+ TF M YG R+ SFNA+L + +++ + E P+++N I D IS
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185
Query: 182 NIVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVL 241
I++K +CD G +A +M +M+ G+ + +TT++S+ YK + E+++ LWN MV
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245
Query: 242 RGCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEM 301
+GC + A++NVRI + +L+ M ++G+ PD I+YN +M +C G L+
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305
Query: 302 AKRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLT 361
AK+VY L GN PN ++T+I +LC S + Y + K ++ + P+ +TL ++
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365
Query: 362 ALKKMGQPGKAQLILTLATKRVPP 384
L + + A+ ++ K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380
BLAST of Cp4.1LG02g14920 vs. ExPASy Swiss-Prot
Match:
Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)
HSP 1 Score: 205.7 bits (522), Expect = 9.9e-52
Identity = 112/371 (30.19%), Postives = 207/371 (55.80%), Query Frame = 0
Query: 9 RFFHAGTVIASIETSAAILN----RVQNSKPLEEPALIKLKAERDPEKLFHLFKANAHNR 68
R +A I S+ +++ IL+ SK + AL LK+E+DP+++ + +A +
Sbjct: 15 RHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTP 74
Query: 69 LVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKH 128
+R AF V LA + F + +LL+ + P + E F I+LY +A M+ H
Sbjct: 75 DCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDH 134
Query: 129 AVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVV 188
++ F D+ + RTVKS NA+L + +D + E P+ + IE D+ + N ++
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 189 KGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCL 248
K FC+ G + +Y ++ EME+ GI+P+ ++ +IS FY ++ + + +M RG
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 249 PNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRV 308
++++N+RIQ L R+++ EA L++ M + G+ P+ +TY+ ++ GFC E AK++
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 309 YSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKK 368
+ + G KP+ + Y T+I+YLC+ GDF + ++CK++M KNW P+ + S++ L K
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAK 374
Query: 369 MGQPGKAQLIL 375
+ +A+ ++
Sbjct: 375 DSKVEEAKELI 385
BLAST of Cp4.1LG02g14920 vs. ExPASy Swiss-Prot
Match:
Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 2.1e-49
Identity = 109/372 (29.30%), Postives = 192/372 (51.61%), Query Frame = 0
Query: 6 PFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKANAHNRL 65
P RRF A TV++ A ++ P ++ + ER+P+++ FK +
Sbjct: 16 PIRRFSSAATVVSEPTAVTAAIS------PPQKSLTSLVNGERNPKRIVEKFKKACESER 75
Query: 66 VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
N ++ TV RL A+R Y+E +LE QK +EGF RII LYGKA M ++A
Sbjct: 76 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135
Query: 126 DTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVVKG 185
F +M C R+V SFNA+L ++ +E E P K +I+ DI+S N ++K
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195
Query: 186 FCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCLPN 245
C+ L A L+ E+E G++PD+VT+ TL+ + Y Q E+ +W MV + +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255
Query: 246 LASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRVYS 305
+ ++N R+ L + ++ E L +K G+ PD ++N +++G G ++ A+ Y
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315
Query: 306 ALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKKMG 365
+ +GY+P+ + ++ +C++GDF + + K+ +K + TL ++ L K
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375
Query: 366 QPGKAQLILTLA 378
+ +A+ I+ +A
Sbjct: 376 KREEAEEIVKIA 381
BLAST of Cp4.1LG02g14920 vs. ExPASy Swiss-Prot
Match:
Q9LK57 (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 3.5e-49
Identity = 115/371 (31.00%), Postives = 187/371 (50.40%), Query Frame = 0
Query: 8 RRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKL-KAERDPEKLFHLFKANAHNRLV 67
RRFF A T A+ + +P+LI L ERDP+ + FK
Sbjct: 21 RRFFSAVTAAAATPSP-------------PKPSLITLVNDERDPKFITEKFKKACQAEWF 80
Query: 68 IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAVD 127
+N +E TV RLA A++F+++E +LE Q P +EGF+ RII LYG+ M ++A
Sbjct: 81 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140
Query: 128 TFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVVKGF 187
F +M C RT SFNA+L + ++ +E +E P K +IE D+ S N ++KG
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200
Query: 188 CDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCLPNL 247
C G A L+ E+E G++PD +T+ L+ Y + E +W MV + ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260
Query: 248 ASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRVYSA 307
S+N R+ L ++ E L + +K + PD T+ ++KGF G L+ A Y
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320
Query: 308 LHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKKMGQ 367
+ NG +P ++ +++ +C++GD +Y +CK+ K + L V+ AL K +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 378
Query: 368 PGKAQLILTLA 378
+A+ I+ LA
Sbjct: 381 QDEAEEIVELA 378
BLAST of Cp4.1LG02g14920 vs. NCBI nr
Match:
XP_023524622.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023524623.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023524624.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 800 bits (2066), Expect = 3.76e-292
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA
Sbjct: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
BLAST of Cp4.1LG02g14920 vs. NCBI nr
Match:
XP_022998688.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 775 bits (2001), Expect = 3.04e-282
Identity = 386/399 (96.74%), Postives = 392/399 (98.25%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
MVSLRP RRFFHAGTVIAS ETSAAILN+VQ SKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFFHAGTVIASAETSAAILNQVQTSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCHRTVKSFNAVLK++MKTRD+GALEAFLRETPEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKILMKTRDIGALEAFLRETPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYK NQCEISNGL NLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEISNGLRNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEA KLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEAKKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVL A
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
BLAST of Cp4.1LG02g14920 vs. NCBI nr
Match:
XP_022948342.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022948343.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022948344.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022948345.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 766 bits (1979), Expect = 6.85e-279
Identity = 382/399 (95.74%), Postives = 389/399 (97.49%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
MVSLRP RRF HAGTVIAS ETSAAILN+VQNSK +EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFCHAGTVIASTETSAAILNQVQNSKTVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AH+RLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHDRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCHRTVKSFNAVLKV+MKTRDLGALE FLRETPEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVLMKTRDLGALETFLRETPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYK NQCE+SNGLWNLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEVSNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KR YSALHG+GYK NVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVL A
Sbjct: 301 KRGYSALHGSGYKSNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQPGKAQLILTLATKRVPPF TSQLEAL+TTLVNS
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFNTSQLEALSTTLVNS 399
BLAST of Cp4.1LG02g14920 vs. NCBI nr
Match:
KAG6581920.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 730 bits (1885), Expect = 1.45e-264
Identity = 356/398 (89.45%), Postives = 379/398 (95.23%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
M+SLRPFRRF HA TVI S ET AA+LN VQNSKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPFRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKV+MK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVK FCDMGILNRAYL +LEMEK+GIRPDVVTYTTLISA YK NQCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKMGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAW+ANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFN++YTMCKDAM KNWFPNIDT+HS+L
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVN 398
L KMGQPGKAQLIL+LA KRVPPF+T+QLEALNTT+ N
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398
BLAST of Cp4.1LG02g14920 vs. NCBI nr
Match:
XP_022979497.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979498.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979499.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979500.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979501.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979502.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 729 bits (1883), Expect = 2.92e-264
Identity = 356/398 (89.45%), Postives = 379/398 (95.23%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
M+SLRP RRF HA TVI S ETS A+LN VQNSKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKV+MK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVK FCDMGILNRAYLL+LEMEK+GIRPDVVTYTTLISA YK NQCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAW+ANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFN++YTMCKDAM KNWFPNIDT+HS+L
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVN 398
L KMGQPGKAQLIL+LA KRVPPF+T+QLEALNTT+ N
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398
BLAST of Cp4.1LG02g14920 vs. ExPASy TrEMBL
Match:
A0A6J1KHG3 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111493273 PE=4 SV=1)
HSP 1 Score: 775 bits (2001), Expect = 1.47e-282
Identity = 386/399 (96.74%), Postives = 392/399 (98.25%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
MVSLRP RRFFHAGTVIAS ETSAAILN+VQ SKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFFHAGTVIASAETSAAILNQVQTSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCHRTVKSFNAVLK++MKTRD+GALEAFLRETPEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKILMKTRDIGALEAFLRETPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYK NQCEISNGL NLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEISNGLRNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEA KLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEAKKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVL A
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
BLAST of Cp4.1LG02g14920 vs. ExPASy TrEMBL
Match:
A0A6J1G9L8 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452050 PE=4 SV=1)
HSP 1 Score: 766 bits (1979), Expect = 3.32e-279
Identity = 382/399 (95.74%), Postives = 389/399 (97.49%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
MVSLRP RRF HAGTVIAS ETSAAILN+VQNSK +EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MVSLRPIRRFCHAGTVIASTETSAAILNQVQNSKTVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AH+RLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHDRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGCHRTVKSFNAVLKV+MKTRDLGALE FLRETPEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVLMKTRDLGALETFLRETPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYK NQCE+SNGLWNLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEVSNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KR YSALHG+GYK NVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVL A
Sbjct: 301 KRGYSALHGSGYKSNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQPGKAQLILTLATKRVPPF TSQLEAL+TTLVNS
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFNTSQLEALSTTLVNS 399
BLAST of Cp4.1LG02g14920 vs. ExPASy TrEMBL
Match:
A0A6J1INV5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479183 PE=4 SV=1)
HSP 1 Score: 729 bits (1883), Expect = 1.41e-264
Identity = 356/398 (89.45%), Postives = 379/398 (95.23%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
M+SLRP RRF HA TVI S ETS A+LN VQNSKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKV+MK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVK FCDMGILNRAYLL+LEMEK+GIRPDVVTYTTLISA YK NQCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAW+ANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFN++YTMCKDAM KNWFPNIDT+HS+L
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVN 398
L KMGQPGKAQLIL+LA KRVPPF+T+QLEALNTT+ N
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398
BLAST of Cp4.1LG02g14920 vs. ExPASy TrEMBL
Match:
A0A6J1GVU5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457895 PE=4 SV=1)
HSP 1 Score: 725 bits (1871), Expect = 9.53e-263
Identity = 353/398 (88.69%), Postives = 377/398 (94.72%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
M+SLRP RRF HA T+I S ET AA+LN VQNSKP+EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFY+MHLYGC RTVKSFNAVLKV+MK RDLGALEAFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVK FCDMGILNRAYL +LEMEK+GIRPDVVTYTTLISA YK NQCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAW+ANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSALHG+GYKPNVKIYQTMIHYLCRSGDFN++YTMCKDAM KNWFPNIDT+HS+L
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVN 398
L KMGQPGKAQLIL+LA KRVPPF+T+QLEALNT + N
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTIMAN 398
BLAST of Cp4.1LG02g14920 vs. ExPASy TrEMBL
Match:
A0A6J1DJH5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021098 PE=4 SV=1)
HSP 1 Score: 713 bits (1840), Expect = 5.04e-258
Identity = 351/399 (87.97%), Postives = 374/399 (93.73%), Query Frame = 0
Query: 1 MVSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKAN 60
M+SLRP RRF A TVI S ET AA+ N+V NSK +EEPALIKLKAERDPEKLFHLFKAN
Sbjct: 1 MLSLRPIRRFCRAATVIVSTETPAAVFNQVLNSKSVEEPALIKLKAERDPEKLFHLFKAN 60
Query: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
Query: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVN 180
IKHAVDTFYDMHLYGC RTVKSFNAVLKV+MKTRDLGA+EAFL E PEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGAIEAFLSEAPEKFDIELDIISVN 180
Query: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLR 240
IVVK FCD+GIL+RAYLLMLEMEK+GIRPDVVTYTTLISAFYK N CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDIGILSRAYLLMLEMEKVGIRPDVVTYTTLISAFYKDNLCEISNGLWNLMVLR 240
Query: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300
GCLPNLASFNVRIQYLVDRRRAWEANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGF +MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFFDMA 300
Query: 301 KRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTA 360
KRVYSAL G+GYKPNVKIYQTMIHYLCRSGDFNL+YTMCKDAMN+NWFPNIDT+HS++
Sbjct: 301 KRVYSALQGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNRNWFPNIDTIHSLIKG 360
Query: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLVNS 399
LKKMGQ GKAQLILTLA KRVPPF+ +QLEALNTTL S
Sbjct: 361 LKKMGQLGKAQLILTLARKRVPPFSLTQLEALNTTLAKS 399
BLAST of Cp4.1LG02g14920 vs. TAIR 10
Match:
AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 511.9 bits (1317), Expect = 4.6e-145
Identity = 251/400 (62.75%), Postives = 313/400 (78.25%), Query Frame = 0
Query: 1 MVSLRPFRRFFH----AGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHL 60
M+SLR RRF H A T IA + T + N++Q KPLEEPAL+KLK+ERDPEKL++L
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60
Query: 61 FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61 FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120
Query: 121 KAEMIKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDI 180
KA M K A+DTF++M LYGC R+VKSFNA L+V+ DL + FL + P K+ I++D
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180
Query: 181 ISVNIVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNL 240
+S NI +K FC++GIL+ AY+ M EMEK G+ PDVVTYTTLISA YK +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240
Query: 241 MVLRGCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGF 300
MVL+GC PNL +FNVRIQ+LV+RRRAW+AN L+ +M + + PD ITYN+V+KGF A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300
Query: 301 LEMAKRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHS 360
+MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+L+YTMCKD M K W+PN+DT+
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360
Query: 361 VLTALKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTL 397
+L L K GQ +A+ I+ L +RVPPF + QL +L + L
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
BLAST of Cp4.1LG02g14920 vs. TAIR 10
Match:
AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 216.5 bits (550), Expect = 4.0e-56
Identity = 126/384 (32.81%), Postives = 206/384 (53.65%), Query Frame = 0
Query: 2 VSLRPFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLF-KAN 61
+SLR RRF A A T+A ++ SK A L+ E DP+K ++ +
Sbjct: 6 ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65
Query: 62 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
H+ + +R+A E TV RLA RRF IE L+E K P+ + E F +I YG+A M
Sbjct: 66 DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125
Query: 122 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFN-IELDIISV 181
HA+ TF M YG R+ SFNA+L + +++ + E P+++N I D IS
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185
Query: 182 NIVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVL 241
I++K +CD G +A +M +M+ G+ + +TT++S+ YK + E+++ LWN MV
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245
Query: 242 RGCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEM 301
+GC + A++NVRI + +L+ M ++G+ PD I+YN +M +C G L+
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305
Query: 302 AKRVYSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLT 361
AK+VY L GN PN ++T+I +LC S + Y + K ++ + P+ +TL ++
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365
Query: 362 ALKKMGQPGKAQLILTLATKRVPP 384
L + + A+ ++ K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380
BLAST of Cp4.1LG02g14920 vs. TAIR 10
Match:
AT1G61870.1 (pentatricopeptide repeat 336 )
HSP 1 Score: 205.7 bits (522), Expect = 7.0e-53
Identity = 112/371 (30.19%), Postives = 207/371 (55.80%), Query Frame = 0
Query: 9 RFFHAGTVIASIETSAAILN----RVQNSKPLEEPALIKLKAERDPEKLFHLFKANAHNR 68
R +A I S+ +++ IL+ SK + AL LK+E+DP+++ + +A +
Sbjct: 15 RHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTP 74
Query: 69 LVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKH 128
+R AF V LA + F + +LL+ + P + E F I+LY +A M+ H
Sbjct: 75 DCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDH 134
Query: 129 AVDTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVV 188
++ F D+ + RTVKS NA+L + +D + E P+ + IE D+ + N ++
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 189 KGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCL 248
K FC+ G + +Y ++ EME+ GI+P+ ++ +IS FY ++ + + +M RG
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 249 PNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRV 308
++++N+RIQ L R+++ EA L++ M + G+ P+ +TY+ ++ GFC E AK++
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 309 YSALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKK 368
+ + G KP+ + Y T+I+YLC+ GDF + ++CK++M KNW P+ + S++ L K
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAK 374
Query: 369 MGQPGKAQLIL 375
+ +A+ ++
Sbjct: 375 DSKVEEAKELI 385
BLAST of Cp4.1LG02g14920 vs. TAIR 10
Match:
AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 198.0 bits (502), Expect = 1.5e-50
Identity = 109/372 (29.30%), Postives = 192/372 (51.61%), Query Frame = 0
Query: 6 PFRRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKLKAERDPEKLFHLFKANAHNRL 65
P RRF A TV++ A ++ P ++ + ER+P+++ FK +
Sbjct: 16 PIRRFSSAATVVSEPTAVTAAIS------PPQKSLTSLVNGERNPKRIVEKFKKACESER 75
Query: 66 VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
N ++ TV RL A+R Y+E +LE QK +EGF RII LYGKA M ++A
Sbjct: 76 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135
Query: 126 DTFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVVKG 185
F +M C R+V SFNA+L ++ +E E P K +I+ DI+S N ++K
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195
Query: 186 FCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCLPN 245
C+ L A L+ E+E G++PD+VT+ TL+ + Y Q E+ +W MV + +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255
Query: 246 LASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRVYS 305
+ ++N R+ L + ++ E L +K G+ PD ++N +++G G ++ A+ Y
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315
Query: 306 ALHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKKMG 365
+ +GY+P+ + ++ +C++GDF + + K+ +K + TL ++ L K
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375
Query: 366 QPGKAQLILTLA 378
+ +A+ I+ +A
Sbjct: 376 KREEAEEIVKIA 381
BLAST of Cp4.1LG02g14920 vs. TAIR 10
Match:
AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 197.2 bits (500), Expect = 2.5e-50
Identity = 115/371 (31.00%), Postives = 187/371 (50.40%), Query Frame = 0
Query: 8 RRFFHAGTVIASIETSAAILNRVQNSKPLEEPALIKL-KAERDPEKLFHLFKANAHNRLV 67
RRFF A T A+ + +P+LI L ERDP+ + FK
Sbjct: 21 RRFFSAVTAAAATPSP-------------PKPSLITLVNDERDPKFITEKFKKACQAEWF 80
Query: 68 IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAVD 127
+N +E TV RLA A++F+++E +LE Q P +EGF+ RII LYG+ M ++A
Sbjct: 81 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140
Query: 128 TFYDMHLYGCHRTVKSFNAVLKVMMKTRDLGALEAFLRETPEKFNIELDIISVNIVVKGF 187
F +M C RT SFNA+L + ++ +E +E P K +IE D+ S N ++KG
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200
Query: 188 CDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKANQCEISNGLWNLMVLRGCLPNL 247
C G A L+ E+E G++PD +T+ L+ Y + E +W MV + ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260
Query: 248 ASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMAKRVYSA 307
S+N R+ L ++ E L + +K + PD T+ ++KGF G L+ A Y
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320
Query: 308 LHGNGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLTALKKMGQ 367
+ NG +P ++ +++ +C++GD +Y +CK+ K + L V+ AL K +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 378
Query: 368 PGKAQLILTLA 378
+A+ I+ LA
Sbjct: 381 QDEAEEIVELA 378
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8GW57 | 6.4e-144 | 62.75 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... | [more] |
Q9M065 | 5.6e-55 | 32.81 | Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... | [more] |
Q8LE47 | 9.9e-52 | 30.19 | Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... | [more] |
Q9LG23 | 2.1e-49 | 29.30 | Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... | [more] |
Q9LK57 | 3.5e-49 | 31.00 | Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023524622.1 | 3.76e-292 | 100.00 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... | [more] |
XP_022998688.1 | 3.04e-282 | 96.74 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mito... | [more] |
XP_022948342.1 | 6.85e-279 | 95.74 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... | [more] |
KAG6581920.1 | 1.45e-264 | 89.45 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022979497.1 | 2.92e-264 | 89.45 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KHG3 | 1.47e-282 | 96.74 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mito... | [more] |
A0A6J1G9L8 | 3.32e-279 | 95.74 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
A0A6J1INV5 | 1.41e-264 | 89.45 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
A0A6J1GVU5 | 9.53e-263 | 88.69 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc... | [more] |
A0A6J1DJH5 | 5.04e-258 | 87.97 | pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G80150.1 | 4.6e-145 | 62.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G36680.1 | 4.0e-56 | 32.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G61870.1 | 7.0e-53 | 30.19 | pentatricopeptide repeat 336 | [more] |
AT1G55890.1 | 1.5e-50 | 29.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G13160.1 | 2.5e-50 | 31.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |