Cp4.1LG02g14740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g14740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionEpidermal patterning factor-like protein
LocationCp4.1LG02: 13749872 .. 13754455 (-)
RNA-Seq ExpressionCp4.1LG02g14740
SyntenyCp4.1LG02g14740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCCATTAATTGAAAAAAAAAAAAAAAAAAAAAAAAAANAGAAGAAGAGGCAAGGTAGAAGAAGAAAGGGAAGCGGACAAGCTGAGCTTGTGAATCCTCGAAGAGGCATTTTCGATTTCAGGAAGCACGAGAGGGGCGACCCGTGATATTGTTCATTCAAGGTCGACCCACCTTTTTCCTCGAAAGTTTCAATTTCTTTTTATCTCAATTTTTAATTTTGATCTATGGATTTCTCGAACTTGCTTTTGTTTCTGCCTTTTATCTTTACACCCGTGAATCATTTTCGATTTCAGAAGCGGCTCGGCTCTCTCATCTTTTCTTCCTCGAATCGGATTTGGTGCTTCCTGGATCCGTTTTGGCCTTCTGGGTTTGCTTTTTAGACGTTGCCCTATACTTGGGGTAAGTTATTTTTTGCTGTTTTGGATTTTGAATTTATTAGTTATTTGATTGATGCAATGGGCGTGGCATTGTTCTGTTCGCGAAATTGGTTATTGGCTGTGTTTGGTTTCTTAAAAGAAATTGTGGCAAAATGAAAGGAGGGATTTAAACTGGTTACCTACCTGATTTCATCTTAATGATTGAACCATTTCTGCTGCTTTAATATTCATTTGTTTTGTTTCTAATGGACTTAATAATCTTAGCATTGAAATCCAAAGATCCAATGGCTTAAGGGGGATTCTCTCAAGTGTAATGGACATATGGGAAAATGTGAATAGCTATTGAATGAACATCATAGATATATCCCTGTCATGCTACAATGGCATCCTCTTTTTCTCCTTTTGGTTTTTTTTCATTGTTCAATATAGTTTTGAACTATGATGTGGCTGGTTTTCTAATGAGTTTCTTGATGAACTGTAGTTTGTAATAGAGCATTGGTTGCGTTGAAAACTATACAACTCTAAAGTTACAACCTCCGAAGTATATTGATCCAAGGCTTCTTGTAACACACTTTGGAAATCACAAGCACGCGTGGTATGGACAACAGTGCTAACCAGTCACGGGGTGGTGATTCATCAATTAAAACCGAACAATTACAAGAGGATTCTAGCAAAGCTAACACTCCTGCATTTGTAAATCATGGTAAGTTCTCATTGCTGCTACAATTTCTTGCAACTTTGCTTCATTAACTTGTTGCCATAGCATTAAAGTCGAGAGCAAAGGCTCCAATGCCATTTTCTTAAATGTCAAGTCTTGATCCTGTCTGAGTTGATGCAACACAAACACCAAACAATCATCATGGGCTCGTCTAGTAGTCAATAACGGCAGTGAGAATAATAAGGAGCTCAGAGGGCATAAGTTTAAGTCATGGTGGCCACCTACCTAGAATTTAATATTCTACAAGTTTCCTTGACAACCAATGTAGTAGGATCAGACGGTTGTCACTTGAGATTAGTCGAAATGCGTGCAAGTAGTCTCAAATACTCAGCAAATATATATGTAAGAAATAAATACTACGACCAATACATAGGTTGTAATTTGTTAGAATCCATTTACAAGCAAACGGTAAAGTAGCTGTACTACAATATAAAAAAAAACAAATAACAAAAGCAATAGCGTTTTGAGGGGGCTCACTCTCCTACAATGAATTTCTATAGCACTATGTCTAACTCCACACTATAAATTCCTCTATTTGTAATCAATCCCACCCTAACAAAGTACCAAGTAATTGCTATTATGTCACTACTAACATTCTCAATGTAACTCTATTAATACTCTTACTCTGATATCATTATTCTATCGCTTTGCATACGAAAAGGTTGCAGCTTAGGAGTTTCTATGTTCAACAATATTGTCATTTGTTTAGGTGGTGGTTTGACAGTTTTAGTTGTAGGTCTTCTTCTCTGGAATCAAAATAGGCAGCAATGGCTGCTGAAAAAAAAGGCCAACCGTAAAGAACAATTGATTCGAGAACCCAAATTGAGGTAAGTTGGTCACTGTTCTTTTCTATAACCAAAATTATTTGTATATCCATAAATGCATCTGGAAAGTTTTGAGTTCTATTTATAGTGCTGTAATTAGATTATTGGCAACCCATTTATTCCAGTCCATACTGAAAACAATTTATTAGTTACTTCTAGATACTCCCATTGCCAACTTCTAAATTATGCCCATTTTTTAGAAGCATTTATCCGACGTCTAGAAGATCTTTTATTCTATACATTTTATGTATGTTTTCCAAAACATTGTTACGAGTTTCTATGATGCTTTTCTTCTAATGTGGCCATGATTTCACATCCCTACTATGTGTTTGGTCAAGTAGGCCTATTAGAAGGTTAATTCTTCTATGGAATTTCTTTTATGGAGTTTGTTTGGAGAACTTTTCCCAAGACTTTTTTTTTTCTTCTTGTTTTCTATTTTCAGAAGTGTTTTTAATAATTAGGATTGTATGGAAGGTAAAAGGTCAATGATATTGTTGATATTCAAATCACCATTCTCAAACGAGCAAGTTTCTTTGTTTGGAAAAAAGGAATTTTTTTTATAAAGAAGTTCCAAACTAGTCTAGTTCCAAGCATTGACATTTACTTCAATGAAATCATTCATTTCTAAAAAGTCTTGATATTCTATTTCAATACTTCAACATGTTGATACTTGTCAAACTGAAGGATTGCTGGATGATAAAATACCAGAAAGAAAAATTGGTTATAACACTCTGGTTTCTCTGAATCGGGAGTTGATTATTCTTGAACTTTGTTTGTTGCATCTTTGTCAGCACTCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACGTACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTATACCGCTTGGTGTAAGTGTCCACCATATCCAACTTATATGCTTCTTGGCTGATCAAGTTTTCTGATTAATCTTGCCTGGTTGGTCCAATCTTGAAATCTACAGGAAATGGTCGATTTTCTCGTGGACATATGGGAGCAAGAGGGGCTGTATGATTGAATATCATGGATGGAATGTAAGATATTTGAAGGTTAAGCTAGACTCCGGAAGCTCCCTGAACTGCTGAACTAGAACTATAACATCTACAGGTTCAATTAATTGTTAAGTTGGCAACTTGAGCCAATACCAAAATGTAGCATTCTGCAAAAACAAAGTATCAATCCATATTATTACTGATCACTGTTCAGCTTGTTGCTCAGGCGTCTTGTGTTCTTCCCTTGGGGTAGTTCTTTTTTAATCAAGTTCTTGTCTGAAACTTGAGTTGCTTCCTTCTGTTGAAATGGTGGACTGTGTGTAGAGAGAGACAAATGTGTTGATTGTTTCCAATATTTTATCCATAATTTGTTTCATTATATATAAAATTTTGCTCCCTTCTATGAAAAATGTTTATCTCAACAGCCATATCACTATTAGGATTCAAGTAAAGCAAGATACACAGCACCAACAAAGCGTGCCACTCTATAGTCTTGTCAAAGACAAAATTTGGTTACCGTACATGTACAATCATTTTTCAGAGTACAGAGGACGGTTGGATGCCGTGTGATGAGAGGACAAGAGAGCGTTGACTTTGAACGAGAACCGTTGATGATTCTCAATCAGGTGGTGTCAGTGTTTCTACATCAATCATGTGGTGTTCAGATATGCTCTCTCTTCTTCTTCTTCTACAATTGTAAATGTTGATGTGATGATGCAGAGACAGAGGATCTATGGTTTTGCTTTCTTTTCTCCATGAATATATATATATTTTTTAATTTTATTTTACTGTTTGATTTGCAGAGACTGAAAATGGAGGAACTATTTGTGATTGACGGCCCCCACTTTATTTGATTCCTTCTAGTTTTGAACTCACCAATGCCTTTATGAGTTTAATATTTTCCATGGAAGCTTTAACAAAATCTGCTGTTCTTCTATTCCACCACTGTTTTGGGGAAGCTTTTCACTTTCTCATCCTTTCCACCATGCCCACCAATTCCTTATATTGAAATCTCTTCCTTTATCTCTCATAAGACACAGAGCTTCTCTCACTCAGCTCCAATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTTGCTTCCTCTTCCTGCATTATCAGGTAAAGAAAGAACACCCTTTCAGCCGTTTTTTCATCAGCTAAAAAAAAAATTTATAACTTTTGTGTGTCTCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCATAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGAGAATATATGGTTTCCTGGGTTTTGCCATTAATGGAGTTGGGTGTTGTTTATGGGATGGTGGTTTTTATGTACAGAAATGAACATGTTTTAGCTTCTTTTGTACTCTGTTTTTCTTCCCCCCTGTTCTTTTGGATCCATTTTTGTCTGCCTTGCTGCCATTTTCCAAGTTTTTGGAATTGGAATCA

mRNA sequence

CTTGCCATTAATTGAAAAAAAAAAAAAAAAAAAAAAAAAANAGAAGAAGAGGCAAGGTAGAAGAAGAAAGGGAAGCGGACAAGCTGAGCTTGTGAATCCTCGAAGAGGCATTTTCGATTTCAGGAAGCACGAGAGGGGCGACCCGTGATATTGTTCATTCAAGAAGCGGCTCGGCTCTCTCATCTTTTCTTCCTCGAATCGGATTTGGTGCTTCCTGGATCCGTTTTGGCCTTCTGGGTTTGCTTTTTAGACGTTGCCCTATACTTGGGTTTGTAATAGAGCATTGGTTGCGTTGAAAACTATACAACTCTAAAGTTACAACCTCCGAAGTATATTGATCCAAGGCTTCTTGTAACACACTTTGGAAATCACAAGCACGCGTGGTATGGACAACAGTGCTAACCAGTCACGGGGTGGTGATTCATCAATTAAAACCGAACAATTACAAGAGGATTCTAGCAAAGCTAACACTCCTGCATTTGTAAATCATGGTCTTCTTCTCTGGAATCAAAATAGGCAGCAATGGCTGCTGAAAAAAAAGGCCAACCGTAAAGAACAATTGATTCGAGAACCCAAATTGAGCACTCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACGTACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTATACCGCTTGGTGAAATGGTCGATTTTCTCGTGGACATATGGGAGCAAGAGGGGCTGTATGATTGAATATCATGGATGGAATGTAAGATATTTGAAGGTTAAGCTAGACTCCGGAAGCTCCCTGAACTGCTGAACTAGAACTATAACATCTACAGGTTCAATTAATTGTTAAGTTGGCAACTTGAGCCAATACCAAAATGTAGCATTCTGCAAAAACAAAGTATCAATCCATATTATTACTGATCACTGTTCAGCTTGTTGCTCAGGCGTCTTGTGTTCTTCCCTTGGGGTAGTTCTTTTTTAATCAAGTTCTTGTCTGAAACTTGAGTTGCTTCCTTCTGTTGAAATGGTGGACTGTGTGTAGAGAGAGACAAATGTGTTGATTGTTTCCAATATTTTATCCATAATTTGTTTCATTATATATAAAATTTTGCTCCCTTCTATGAAAAATGTTTATCTCAACAGCCATATCACTATTAGGATTCAAGTAAAGCAAGATACACAGCACCAACAAAGCGTGCCACTCTATAGTCTTGTCAAAGACAAAATTTGGTTACCGTACATGTACAATCATTTTTCAGAGTACAGAGGACGGTTGGATGCCGTGTGATGAGAGGACAAGAGAGCGTTGACTTTGAACGAGAACCGTTGATGATTCTCAATCAGGTGGTGTCAGTGTTTCTACATCAATCATGTGGTGTTCAGATATGCTCTCTCTTCTTCTTCTTCTACAATTGTAAATGTTGATGTGATGATGCAGAGACAGAGGATCTATGGTTTTGCTTTCTTTTCTCCATGAATATATATATATTTTTTAATTTTATTTTACTGTTTGATTTGCAGAGACTGAAAATGGAGGAACTATTTGTGATTGACGGCCCCCACTTTATTTGATTCCTTCTAGTTTTGAACTCACCAATGCCTTTATGAGTTTAATATTTTCCATGGAAGCTTTAACAAAATCTGCTGTTCTTCTATTCCACCACTGTTTTGGGGAAGCTTTTCACTTTCTCATCCTTTCCACCATGCCCACCAATTCCTTATATTGAAATCTCTTCCTTTATCTCTCATAAGACACAGAGCTTCTCTCACTCAGCTCCAATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTTGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCATAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGAGAATATATGGTTTCCTGGGTTTTGCCATTAATGGAGTTGGGTGTTGTTTATGGGATGGTGGTTTTTATGTACAGAAATGAACATGTTTTAGCTTCTTTTGTACTCTGTTTTTCTTCCCCCCTGTTCTTTTGGATCCATTTTTGTCTGCCTTGCTGCCATTTTCCAAGTTTTTGGAATTGGAATCA

Coding sequence (CDS)

ATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTTGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCATAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGA

Protein sequence

MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Homology
[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-07
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0 

Query: 13  AVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNCRPCTASLVVPEH 72
           A+ VA +F  LL L  +S   A G +   K+ V+GS+PP C  KC NC+PC   L     
Sbjct: 15  ALFVANIFFSLLSLHCIS--GAHGHQQRMKESVMGSEPPVCATKCRNCKPCLPYL----- 74

Query: 73  RERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP 108
                F+      ++DDS  YY + W C+C +++++P
Sbjct: 75  -----FDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-05
Identity = 26/63 (41.27%), Postives = 28/63 (44.44%), Query Frame = 0 

Query: 46  LGSKPPRCIGKCLNCRPC-TASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKL 105
           LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKL
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTA------------EYYPEAWRCKCGNKL 156

Query: 106 YQP 108
           Y P
Sbjct: 166 YMP 156

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 9.2e-05
Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 0 

Query: 45  VLGSKPPRCIG-KCLNCRPCTASLVVPEHRERK--------------GFEADLNRREEDD 104
           ++GS+PPRC   +C +C  C A + VP + + K                  D  R ++  
Sbjct: 52  LIGSRPPRCERVRCRSCGHCEA-IQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDST 111

Query: 105 SYYLLHWKCKCGNKLYQP 108
           +Y  + WKCKCGN +Y P
Sbjct: 112 NYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04
Identity = 22/65 (33.85%), Postives = 28/65 (43.08%), Query Frame = 0 

Query: 43  KMVLGSKPPRCIGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGN 102
           +++LGS+PP C  KC  C PC A LV+               R     YY   W C    
Sbjct: 463 RILLGSRPPNCTNKCHGCSPCKAKLVIV-------------HRIMPQEYYPQRWMCSRHG 514

Query: 103 KLYQP 108
           K+Y P
Sbjct: 523 KIYHP 514

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04
Identity = 25/62 (40.32%), Postives = 29/62 (46.77%), Query Frame = 0 

Query: 47  GSKPPRCIGKCLNCRPCTASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLY 106
           GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+
Sbjct: 60  GSSPPTCRSKCGKCQPCK-----PVHVPIQPGLSMPL-------EYYPEAWRCKCGNKLF 109

Query: 107 QP 108
            P
Sbjct: 120 MP 109

[Close]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match: XP_023525861.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221 bits (563), Expect = 9.74e-73
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match: XP_022948690.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata])

HSP 1 Score: 219 bits (558), Expect = 5.64e-72
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPA GGGESLWKKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match: XP_022998271.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima])

HSP 1 Score: 218 bits (556), Expect = 1.14e-71
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSL LPLPALSAPAAGGGESLWKKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLSLPLPALSAPAAGGGESLWKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match: KAG6606797.1 (EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036508.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (552), Expect = 4.65e-71
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPA GGGESLWKKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match: XP_038876854.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida])

HSP 1 Score: 177 bits (448), Expect = 3.00e-55
Identity = 89/107 (83.18%), Postives = 96/107 (89.72%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASP ++LKLVIA+AV  VFSLLLPLP  SA   G  ESL KKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPRSVLKLVIAIAV--VFSLLLPLPTSSA--LGDIESLQKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTA+LVVPEHRERKGFEA+L+RREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTAALVVPEHRERKGFEANLDRREEDDSYYLLHWKCKCGNKLYQP 103

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match: A0A6J1GAL3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452285 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 2.73e-72
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPA GGGESLWKKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match: A0A6J1K9T3 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492958 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 5.52e-72
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNC 60
           MASPSNLLKLVIAVAVAAVFSL LPLPALSAPAAGGGESLWKKMVLGSKPPRC+GKCLNC
Sbjct: 1   MASPSNLLKLVIAVAVAAVFSLSLPLPALSAPAAGGGESLWKKMVLGSKPPRCVGKCLNC 60

Query: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  RPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match: A0A0A0KWT7 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G005010 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 9.92e-50
Identity = 83/108 (76.85%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 1   MASPSN-LLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLN 60
           MASP+N LLKLV+AVA A VFSL L LP LS  A    ESL K+ VLGSKPPRC+GKCLN
Sbjct: 1   MASPTNNLLKLVVAVAFAVVFSLFLSLPTLSGVAEV--ESLQKRTVLGSKPPRCVGKCLN 60

Query: 61  CRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           CRPCTA+LVVPEHRE K FE +L+ REEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  CRPCTAALVVPEHREGKRFEGNLDHREEDDSYYLLHWKCKCGNKLYQP 106

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match: A0A5D3E1Z8 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001760 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.14e-46
Identity = 81/108 (75.00%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 1   MASPSN-LLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLN 60
           MASPSN LLK V+ V  A V SLLL L  LSA  A    SL K+ VLGSKPPRC+GKCLN
Sbjct: 1   MASPSNNLLKPVVVVTFAIVLSLLLSLTTLSA-VAEVESSLQKRTVLGSKPPRCVGKCLN 60

Query: 61  CRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           CRPCTA+LVVPEH ERK FE +L+RREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  CRPCTAALVVPEHLERKRFERNLDRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match: A0A1S3BZD4 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103494701 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.14e-46
Identity = 81/108 (75.00%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 1   MASPSN-LLKLVIAVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLN 60
           MASPSN LLK V+ V  A V SLLL L  LSA  A    SL K+ VLGSKPPRC+GKCLN
Sbjct: 1   MASPSNNLLKPVVVVTFAIVLSLLLSLTTLSA-VAEVESSLQKRTVLGSKPPRCVGKCLN 60

Query: 61  CRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP 107
           CRPCTA+LVVPEH ERK FE +L+RREEDDSYYLLHWKCKCGNKLYQP
Sbjct: 61  CRPCTAALVVPEHLERKRFERNLDRREEDDSYYLLHWKCKCGNKLYQP 107

[Close]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0 

Query: 13  AVAVAAVFSLLLPLPALSAPAAGGGESLWKKMVLGSKPPRCIGKCLNCRPCTASLVVPEH 72
           A+ VA +F  LL L  +S   A G +   K+ V+GS+PP C  KC NC+PC   L     
Sbjct: 15  ALFVANIFFSLLSLHCIS--GAHGHQQRMKESVMGSEPPVCATKCRNCKPCLPYL----- 74

Query: 73  RERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP 108
                F+      ++DDS  YY + W C+C +++++P
Sbjct: 75  -----FDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

[Close]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 26/63 (41.27%), Postives = 28/63 (44.44%), Query Frame = 0 

Query: 46  LGSKPPRCIGKCLNCRPC-TASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKL 105
           LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKL
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTA------------EYYPEAWRCKCGNKL 230

Query: 106 YQP 108
           Y P
Sbjct: 240 YMP 230

[Close]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 26/63 (41.27%), Postives = 28/63 (44.44%), Query Frame = 0 

Query: 46  LGSKPPRCIGKCLNCRPC-TASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKL 105
           LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKL
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTA------------EYYPEAWRCKCGNKL 156

Query: 106 YQP 108
           Y P
Sbjct: 166 YMP 156

[Close]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 6.5e-06
Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 0 

Query: 45  VLGSKPPRCIG-KCLNCRPCTASLVVPEHRERK--------------GFEADLNRREEDD 104
           ++GS+PPRC   +C +C  C A + VP + + K                  D  R ++  
Sbjct: 52  LIGSRPPRCERVRCRSCGHCEA-IQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDST 111

Query: 105 SYYLLHWKCKCGNKLYQP 108
           +Y  + WKCKCGN +Y P
Sbjct: 112 NYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 25/62 (40.32%), Postives = 29/62 (46.77%), Query Frame = 0 

Query: 47  GSKPPRCIGKCLNCRPCTASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLY 106
           GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+
Sbjct: 60  GSSPPTCRSKCGKCQPCK-----PVHVPIQPGLSMPL-------EYYPEAWRCKCGNKLF 109

Query: 107 QP 108
            P
Sbjct: 120 MP 109

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g14740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1G3V92.6e-0735.05EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY62.4e-0541.27EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9T0689.2e-0532.05EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
P432121.6e-0433.85Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1[more]
Q2V3I32.1e-0440.32EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of Cp4.1LG02g14740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525861.19.74e-73100.00EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo][more]
XP_022948690.15.64e-7298.13EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata][more]
XP_022998271.11.14e-7198.13EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima][more]
KAG6606797.14.65e-7197.20EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subs... [more]
XP_038876854.13.00e-5583.18EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida][more]
BLAST of Cp4.1LG02g14740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GAL32.73e-7298.13Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1K9T35.52e-7298.13Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A0A0KWT79.92e-5076.85Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G005... [more]
A0A5D3E1Z81.14e-4675.00Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3BZD41.14e-4675.00Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103494701... [more]
BLAST of Cp4.1LG02g14740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80133.11.8e-0835.05unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 prot... [more]
AT2G30370.11.7e-0641.27allergen-related [more]
AT2G30370.21.7e-0641.27allergen-related [more]
AT4G37810.16.5e-0632.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G14723.11.5e-0540.32BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 45..107
e-value: 8.6E-20
score: 70.5
NoneNo IPR availablePANTHERPTHR33109:SF57EPIDERMAL PATTERNING FACTOR-LIKE PROTEINcoord: 6..107
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 6..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g14740.1Cp4.1LG02g14740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane