Cp4.1LG02g14690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g14690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLEA_2 domain-containing protein
LocationCp4.1LG02: 13876006 .. 13876365 (+)
RNA-Seq ExpressionCp4.1LG02g14690
SyntenyCp4.1LG02g14690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTGAGTTGCTTAAGGGGCTCCGGCGGCGGGATTGGGTACATGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAGAGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGCTGCAGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACTTCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATTTCCTCCGCCATTTTGCGAAGGGCGCCGCCTGAGTTTGTGGTTCTGAAACTGAAAGTTTAG

mRNA sequence

ATGAATTTGAGTTGCTTAAGGGGCTCCGGCGGCGGGATTGGGTACATGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAGAGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGCTGCAGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACTTCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATTTCCTCCGCCATTTTGCGAAGGGCGCCGCCTGAGTTTGTGGTTCTGAAACTGAAAGTTTAG

Coding sequence (CDS)

ATGAATTTGAGTTGCTTAAGGGGCTCCGGCGGCGGGATTGGGTACATGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAGAGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGCTGCAGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACTTCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATTTCCTCCGCCATTTTGCGAAGGGCGCCGCCTGAGTTTGTGGTTCTGAAACTGAAAGTTTAG

Protein sequence

MNLSCLRGSGGGIGYMERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRAPPEFVVLKLKV
Homology
BLAST of Cp4.1LG02g14690 vs. NCBI nr
Match: KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225 bits (573), Expect = 7.05e-74
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0

Query: 1   MNLSCLRGSGGGIGYMERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFSCSMSGARE 60
           MNLSCLRG+GGGIGY+ERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMF C MSGARE
Sbjct: 1   MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGARE 60

Query: 61  VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRAPPEFVVLKL 117
           VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR PPEFVVLKL
Sbjct: 61  VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPPEFVVLKL 117

BLAST of Cp4.1LG02g14690 vs. NCBI nr
Match: KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224 bits (572), Expect = 1.00e-73
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0

Query: 1   MNLSCLRGSGGGIGYMERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFSCSMSGARE 60
           MNLSCLRG+GGGIGY+ERGYYSAVTVAVLEKTT+RWRVVWRRLKKEKKRMF C MSGARE
Sbjct: 1   MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTSRWRVVWRRLKKEKKRMFRCGMSGARE 60

Query: 61  VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRAPPEFVVLKLKV 119
           VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR PPEFVVLKL V
Sbjct: 61  VHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPPEFVVLKLTV 119

BLAST of Cp4.1LG02g14690 vs. NCBI nr
Match: KDO51221.1 (hypothetical protein CISIN_1g044132mg [Citrus sinensis])

HSP 1 Score: 89.7 bits (221), Expect = 6.65e-20
Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y++RGY   ++    +    T RWR++WR++K+EKKR+F CS SG+  VHVPY+P TY Q
Sbjct: 61  YVKRGYDRVLSFNGLITGSKTPRWRLLWRKIKREKKRIFDCS-SGSTNVHVPYDPCTYSQ 120

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 121 NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 151

BLAST of Cp4.1LG02g14690 vs. NCBI nr
Match: ESR40256.1 (hypothetical protein CICLE_v10026796mg [Citrus clementina])

HSP 1 Score: 88.2 bits (217), Expect = 9.10e-20
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y+ RGY   ++    +    T RWR++WR++K+EK+R+F CS SG+  VHVPY+P TY Q
Sbjct: 20  YVRRGYDRVLSFNGLITGSKTPRWRLLWRKIKREKERIFDCS-SGSTNVHVPYDPYTYSQ 79

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 80  NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 110

BLAST of Cp4.1LG02g14690 vs. NCBI nr
Match: GAY51209.1 (hypothetical protein CUMW_132530 [Citrus unshiu])

HSP 1 Score: 89.4 bits (220), Expect = 9.41e-20
Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y++RGY   ++    +    T RWR++WR++K++KKR+F CS SG  +VHVPY+P TY Q
Sbjct: 61  YVKRGYDRVLSFNGLITGSKTPRWRLLWRKIKRDKKRIFDCS-SGGTDVHVPYDPYTYSQ 120

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 121 NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 151

BLAST of Cp4.1LG02g14690 vs. ExPASy TrEMBL
Match: A0A067EJZ4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.22e-20
Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y++RGY   ++    +    T RWR++WR++K+EKKR+F CS SG+  VHVPY+P TY Q
Sbjct: 61  YVKRGYDRVLSFNGLITGSKTPRWRLLWRKIKREKKRIFDCS-SGSTNVHVPYDPCTYSQ 120

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 121 NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 151

BLAST of Cp4.1LG02g14690 vs. ExPASy TrEMBL
Match: V4ST02 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.41e-20
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y+ RGY   ++    +    T RWR++WR++K+EK+R+F CS SG+  VHVPY+P TY Q
Sbjct: 20  YVRRGYDRVLSFNGLITGSKTPRWRLLWRKIKREKERIFDCS-SGSTNVHVPYDPYTYSQ 79

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 80  NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 110

BLAST of Cp4.1LG02g14690 vs. ExPASy TrEMBL
Match: A0A2H5PFR9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.56e-20
Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 15  YMERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYLQ 74
           Y++RGY   ++    +    T RWR++WR++K++KKR+F CS SG  +VHVPY+P TY Q
Sbjct: 61  YVKRGYDRVLSFNGLITGSKTPRWRLLWRKIKRDKKRIFDCS-SGGTDVHVPYDPYTYSQ 120

Query: 75  NFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRA 108
           NFD G V      DPD  SRSFSARFA+ S + +++
Sbjct: 121 NFDQGYVWA----DPDNASRSFSARFAVPSRVFQKS 151

BLAST of Cp4.1LG02g14690 vs. ExPASy TrEMBL
Match: A0A2C9UYG8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G047000 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.19e-18
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0

Query: 28  VLEKTTA----RWRVVWRRLKKEKKRMFSCSMSG-AREVHVPYNPKTYLQNFDDGSVMMV 87
           VLE +TA    RWR++WR++ +EKK++F CS S  +R +H  Y+P TY QNFD GS+   
Sbjct: 33  VLESSTALRRPRWRLLWRKIMREKKKIFDCSSSACSRRMHFSYDPYTYSQNFDQGSMW-- 92

Query: 88  GDDDPDAISRSFSARFAISSAILRRAPP 110
              DPD +SRSFSARFA+SS I  +  P
Sbjct: 93  --SDPDNMSRSFSARFAVSSRIFEKTHP 116

BLAST of Cp4.1LG02g14690 vs. ExPASy TrEMBL
Match: A0A6J1BGX9 (uncharacterized protein LOC110427535 OS=Herrania umbratica OX=108875 GN=LOC110427535 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.73e-18
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0

Query: 14  GYMERGYYSAVTVAVL--EKTTARWRVVWRRLKKEKKRMFSCSMSGAREVHVPYNPKTYL 73
           GY +  Y   +++ VL       RWR++WR+L +EKK++F CS S    VHV Y+P TY 
Sbjct: 19  GYAKSRYDRMLSIKVLVTRSKLPRWRMLWRKLMREKKKIFDCSSS--TRVHVSYDPCTYA 78

Query: 74  QNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR 107
           QNFD G +      DPD +SRSFSARFA+ S +LRR
Sbjct: 79  QNFDQGLMSA----DPDDLSRSFSARFAVPSRVLRR 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7036482.17.05e-7495.73hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6606769.11.00e-7394.12hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sorori... [more]
KDO51221.16.65e-2048.96hypothetical protein CISIN_1g044132mg [Citrus sinensis][more]
ESR40256.19.10e-2047.92hypothetical protein CICLE_v10026796mg [Citrus clementina][more]
GAY51209.19.41e-2047.92hypothetical protein CUMW_132530 [Citrus unshiu][more]
Match NameE-valueIdentityDescription
A0A067EJZ43.22e-2048.96Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1[more]
V4ST024.41e-2047.92Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 ... [more]
A0A2H5PFR94.56e-2047.92Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1[more]
A0A2C9UYG83.19e-1851.14Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G047000 PE=4 SV=... [more]
A0A6J1BGX97.73e-1847.92uncharacterized protein LOC110427535 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33168:SF70OS01G0182300 PROTEINcoord: 30..107
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 30..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g14690.1Cp4.1LG02g14690.1mRNA