Cp4.1LG02g14180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g14180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dof zinc finger protein DOF1.7-like
Location	Cp4.1LG02: 14063732 .. 14064950 (-)
RNA-Seq Expression	Cp4.1LG02g14180
Synteny	Cp4.1LG02g14180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTAAGTTGGAGAGTGTAGAACAAACAAGCTTAGAGAGAGAAACAAACAGATTCCACATTCCACTTTACAGAGAGAAAATAATTTATTATTTTTTTTATTTTTTTAAAAAAGGCTTTAATTCATCGTCTCTTTATATATGTCGACTGCTCGTCTCTTTCACGCGGATATCTCAACGTATTTCCTCCTCGCCGGCATAGTTTCTGTCACCGGCGATCTTCCTTTTTTCCGGCTCCAAAATCTCACAGAAACCAAAACATACGAACCCAGTTGAGGTTTTTGTGGTTTTCTTCTGAAAAGTTTCAGGCTTGTCCATTCATTTGCTTTTTGGAAGCATGAAAGCTACGGCTTGAAGCTCTTTTTAAACCACTTTTGTCGGATTTTCCCCCCTTTTTGCTCTGTTTTTGCTCTGTTTTAGTCTCTGTTTTTTCTTACAACAAAATCTCCAAACCCTTTCTCAGTTCCCCATCTTTGATCACCGAAACTTCTTCTCGAAAACTGAACCCAAGTTCTTTTTTCTTTTTTTCGCGAAAATTTTGATTTTGTGCTCTGTTTTTTGTTTCTGGGTAACCAAACAATGCAAGACCCATCAACTTTTCCCATGATTAAACCCCAATTTCCCGAACAAGAGCAGCTTAAATGCCCTCGATGTGATTCTACCAACACCAAATTTTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

mRNA sequence

ATGGCACCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

Coding sequence (CDS)

ATGGCACCTCGTCACTTTTGTAAGAATTGCCGTCGGTACTGGACCAAAGGCGGTGCTCTGCGGAACATCCCTGTCGGCGGAGGAAGCCGGAAAAACGCCAAGCGACCGGCGGTGTCGGCCACCGTCAAGCGTCCGCCGTCGTCCTCATCTTCGTCTTCTTCGGGATCGATGCTGAACCCGATTGCGGGTCCGGATCATAACCCCATCCGTGGGTATGGCGGCGGGTTGGAAATTCCGGGGAGCTTCAGCTCGCTGCTGGCGTCAAATGGGCAATATGGGAATCTCCTGGAGAGTATGGATCCGAATCAACCGGAGATGAAAATGATGGAATTGGGGGGATTTTCAGGGAATTTGAATTCTGGGTCTGGCCGGAAATCTGCAGCGGAGGAACAGAGCGGCTGCGTGCCGGAGAATTATTTGGGTGTGTTGCAGAACGGCGATTCCAGTTGTTGGACCGGCGGTGGCAGCAATGGATGGCCTGATCTTGCCATTTTCACACCAGGGTCAAGTTACCAGTAA

Protein sequence

MAPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIAGPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ

Homology

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 5.8e-17
Identity = 56/107 (52.34%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNA-KRPAVSATVKRPPSSSSSSSSGSMLNP- 62
           PRHFCK+CRRYWTKGGALRN+PVGGGSRKNA KR   S++    PS+SS +      +P 
Sbjct: 52  PRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPD 111

Query: 63  -----IAGPDHNPIRGYGG---------GLEIPGSFSSLLASNGQYG 94
                   PD +P R   G         G+EI GSFSSLLA+N Q G
Sbjct: 112 PDPRNSQKPDLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.2e-15
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS-------ATVKRPPSSSSSSSSG 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RK+ KR   S        TV   P    S S  
Sbjct: 56  PRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSE- 115

Query: 63  SMLNPIAGPDHNPIR---GYGGGLEIPGSFSSLLASNGQYGNLL 97
                ++G + NP R   G   G     SFSSLLASN Q G L+
Sbjct: 116 EKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-12
Identity = 57/153 (37.25%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSS-------SSSSSG 62
           PR+FCK CRRYWT+GG+LRN+PVGGGSRKN KR + SA    P S+S       S+S S 
Sbjct: 101 PRYFCKTCRRYWTEGGSLRNVPVGGGSRKN-KRSSSSAASASPASASTANSVVTSASMSM 160

Query: 63  SMLNPIAGPDHNP------------IRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQ 122
           SM +   G   NP               + GGL+ PG F +                P+ 
Sbjct: 161 SMASTGGGASKNPKLVHEGAQDLNLAFPHHGGLQAPGEFPAF---------------PSL 220

Query: 123 PEMKMMELGGFSGNLNSGSGRKSAAE--EQSGC 135
               +   GG  G    G G  SA E    +GC
Sbjct: 221 ESSSVCNPGGPMGTNGRGGGALSAMELLRSTGC 237

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-12
Identity = 65/211 (30.81%), Postives = 87/211 (41.23%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLN--- 62
           PRHFCK CRRYWT GG LR++PVGGG+RK+AKR    +      +SSSSS SG + N   
Sbjct: 53  PRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCS------NSSSSSVSGVVSNSNG 112

Query: 63  ------PIAGPDHNPIRGY----------GGGLEIPGSFSSLLASNGQYGNLLESMDPNQ 122
                 P+  P  +   G           G  L + GSF+S L ++              
Sbjct: 113 VPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSG--- 172

Query: 123 PEMKMMELGGFSGNLNS-------GSGRKSAAEEQSGCVPENYLGV-------------- 171
               ++ +GGF   L S       G GR        G      +G               
Sbjct: 173 ---SVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQ 232

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot
Match: Q9M161 (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSM--LNP 62
           PR+ CK+CRRYWT+GG+LRN+PVGGGSRKN K P         P+SS+SSS+ ++  LNP
Sbjct: 91  PRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPF--------PNSSTSSSTKNLPDLNP 150

Query: 63  -----IAGPDHNPIRGYGGGLEIPGSFSSLL---ASNGQYGNLLESM 100
                 +    NP + +    ++  SFSS +    + G YG+  E +
Sbjct: 151 PFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHYGHFSEQV 189

[Close]

BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: XP_023523362.1 (dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (897), Expect = 5.92e-121
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: KAG7036441.1 (Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (885), Expect = 4.00e-119
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFS NLNSGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: XP_022948818.1 (dof zinc finger protein DOF1.7-like [Cucurbita moschata])

HSP 1 Score: 345 bits (885), Expect = 4.00e-119
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFS NLNSGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: KAG6606726.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343 bits (879), Expect = 3.28e-118
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGS LNPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSTLNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFS NLNSGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. NCBI nr
Match: XP_022997902.1 (dof zinc finger protein DOF1.7-like [Cucurbita maxima])

HSP 1 Score: 335 bits (859), Expect = 3.67e-115
Identity = 163/170 (95.88%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS TVKRPPSSSSSSSSGSM NPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSGSMRNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLE MDPNQPEMKMMELGGFS NL SGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLG+LQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL
Match: A0A6J1GAD4 (dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC111452370 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 1.94e-119
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFS NLNSGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL
Match: A0A6J1K6C2 (dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 PE=4 SV=1)

HSP 1 Score: 335 bits (859), Expect = 1.78e-115
Identity = 163/170 (95.88%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS TVKRPPSSSSSSSSGSM NPI 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSGSMRNPIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
           GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLE MDPNQPEMKMMELGGFS NL SGS
Sbjct: 103 GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGS 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQSGCVPENYLG+LQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSGCVPENYLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL
Match: A0A5A7UYP4 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00020 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 3.13e-93
Identity = 141/170 (82.94%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSSSSS+      NPIA
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSSSST----HPNPIA 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQS  VPENYLGVLQNGDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSATVPENYLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL
Match: A0A1S3BHT0 (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 3.13e-93
Identity = 141/170 (82.94%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSSSSS+      NPIA
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSSSST----HPNPIA 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQS  VPENYLGVLQNGDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSATVPENYLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL
Match: A0A0A0LDG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 1.72e-90
Identity = 138/170 (81.18%), Postives = 149/170 (87.65%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RKN+KR AV+ATVKRPPSS+SS+      N I 
Sbjct: 43  PRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKR-AVAATVKRPPSSTSST----HPNTIT 102

Query: 63  GPDHNPIRGYGGGLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGS 122
            PDHNPIRGYGGGL+IPGSFSSLLASNGQ+GNLLE +DPNQ E+KM+ELG FSG     S
Sbjct: 103 VPDHNPIRGYGGGLDIPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEFSG-----S 162

Query: 123 GRKSAAEEQSGCVPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 172
           GRKSAAEEQS  VPENYLGVLQNGDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 163 GRKSAAEEQSAGVPENYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Cp4.1LG02g14180 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 89.0 bits (219), Expect = 4.1e-18
Identity = 56/107 (52.34%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNA-KRPAVSATVKRPPSSSSSSSSGSMLNP- 62
           PRHFCK+CRRYWTKGGALRN+PVGGGSRKNA KR   S++    PS+SS +      +P 
Sbjct: 52  PRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPD 111

Query: 63  -----IAGPDHNPIRGYGG---------GLEIPGSFSSLLASNGQYG 94
                   PD +P R   G         G+EI GSFSSLLA+N Q G
Sbjct: 112 PDPRNSQKPDLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLG 158

[Close]

BLAST of Cp4.1LG02g14180 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16
Identity = 54/104 (51.92%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVS-------ATVKRPPSSSSSSSSG 62
           PRHFCKNCRRYWTKGGALRNIPVGGG+RK+ KR   S        TV   P    S S  
Sbjct: 56  PRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSE- 115

Query: 63  SMLNPIAGPDHNPIR---GYGGGLEIPGSFSSLLASNGQYGNLL 97
                ++G + NP R   G   G     SFSSLLASN Q G L+
Sbjct: 116 EKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLV 158

[Close]

BLAST of Cp4.1LG02g14180 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 71.6 bits (174), Expect = 6.8e-13
Identity = 65/211 (30.81%), Postives = 87/211 (41.23%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLN--- 62
           PRHFCK CRRYWT GG LR++PVGGG+RK+AKR    +      +SSSSS SG + N   
Sbjct: 53  PRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCS------NSSSSSVSGVVSNSNG 112

Query: 63  ------PIAGPDHNPIRGY----------GGGLEIPGSFSSLLASNGQYGNLLESMDPNQ 122
                 P+  P  +   G           G  L + GSF+S L ++              
Sbjct: 113 VPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSG--- 172

Query: 123 PEMKMMELGGFSGNLNS-------GSGRKSAAEEQSGCVPENYLGV-------------- 171
               ++ +GGF   L S       G GR        G      +G               
Sbjct: 173 ---SVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQ 232

[Close]

BLAST of Cp4.1LG02g14180 vs. TAIR 10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.9e-13
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSM--LNP 62
           PR+ CK+CRRYWT+GG+LRN+PVGGGSRKN K P         P+SS+SSS+ ++  LNP
Sbjct: 91  PRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPF--------PNSSTSSSTKNLPDLNP 150

Query: 63  -----IAGPDHNPIRGYGGGLEIPGSFSSLL---ASNGQYGNLLESM 100
                 +    NP + +    ++  SFSS +    + G YG+  E +
Sbjct: 151 PFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHYGHFSEQV 189

[Close]

BLAST of Cp4.1LG02g14180 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 3   PRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIA 62
           PRHFCK CRRYWT+GGALRN+PVGGG R+N K+   +  +K   SSS  SSS +  +P +
Sbjct: 100 PRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKNGNLKSSSSSSKQSSSVNAQSPSS 159

Query: 63  G 64
           G
Sbjct: 160 G 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g14180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AR6	5.8e-17	52.34	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
O82155	3.2e-15	51.92	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q9SXG8	5.6e-12	37.25	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q39088	9.6e-12	30.81	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9M161	1.3e-11	42.06	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]

BLAST of Cp4.1LG02g14180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523362.1	5.92e-121	100.00	dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036441.1	4.00e-119	98.82	Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022948818.1	4.00e-119	98.82	dof zinc finger protein DOF1.7-like [Cucurbita moschata]	[more]
KAG6606726.1	3.28e-118	98.24	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997902.1	3.67e-115	95.88	dof zinc finger protein DOF1.7-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g14180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAD4	1.94e-119	98.82	dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC11145237...	[more]
A0A6J1K6C2	1.78e-115	95.88	dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 ...	[more]
A0A5A7UYP4	3.13e-93	82.94	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BHT0	3.13e-93	82.94	dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4...	[more]
A0A0A0LDG2	1.72e-90	81.18	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE...	[more]

BLAST of Cp4.1LG02g14180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21270.1	4.1e-18	52.34	DOF zinc finger protein 2	[more]
AT1G51700.1	2.3e-16	51.92	DOF zinc finger protein 1	[more]
AT3G50410.1	6.8e-13	30.81	OBF binding protein 1	[more]
AT4G00940.1	8.9e-13	42.06	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.2	1.2e-12	57.38	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 3..34 e-value: 8.3E-16 score: 57.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 1..34 score: 17.718346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..60
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 3..172
None	No IPR available	PANTHER	PTHR31992:SF153	DOF ZINC FINGER PROTEIN DOF3.1-LIKE	coord: 3..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g14180.1	Cp4.1LG02g14180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding